FFCP PHASE1:Hg19::chr7:104654623..104654669,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:104654623..104654669,+
|short_description=p1@MLL5
|description=CAGE_peak_1_at_MLL5_5end
|association_with_transcript=0bp_to_ENST00000257745,ENST00000311117...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55904 | |EntrezGene=55904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18541 | |HGNC=18541 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZD2,E7ETZ7,F8W6H1,C9JYI9,C9JNE1,O95038 | |UniProt=Q8IZD2,E7ETZ7,F8W6H1,C9JYI9,C9JNE1,O95038 | ||
|association_with_transcript=0bp_to_ENST00000257745,ENST00000311117,ENST00000334877,ENST00000334884,ENST00000334914,ENST00000351043,ENST00000393656,ENST00000476671,ENST00000478990,ENST00000480368,ENST00000495267,NM_018682,NM_182931,uc003vcl.2,uc003vcm.2,uc010lja.1,uc010ljb.1,uc010ljc.2_5end | |||
|cluster_id=chr7:104654623..104654669,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_MLL5_5end | |||
|id=chr7:104654623..104654669,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.25e-35!140;CL:0000037!2.90e-29!172;CL:0000566!2.90e-29!172;CL:0002031!1.28e-28!124;CL:0002032!5.51e-27!165;CL:0000837!5.51e-27!165;CL:0002087!2.58e-25!119;CL:0000988!9.68e-25!182;CL:0000766!7.80e-17!76;CL:0000557!1.18e-14!71;CL:0002057!3.65e-14!42;CL:0000839!7.64e-14!70;CL:0000838!1.04e-13!52;CL:0000763!1.27e-13!112;CL:0000049!1.27e-13!112;CL:0000542!1.40e-13!53;CL:0000051!1.40e-13!53;CL:0000860!3.15e-12!45;CL:0002009!1.02e-11!65;CL:0002194!9.51e-11!63;CL:0000576!9.51e-11!63;CL:0000040!9.51e-11!63;CL:0000559!9.51e-11!63;CL:0000791!1.44e-10!18;CL:0000789!1.44e-10!18;CL:0002420!1.44e-10!18;CL:0002419!1.44e-10!18;CL:0000790!1.44e-10!18;CL:0000084!3.64e-08!25;CL:0000827!3.64e-08!25;CL:0000625!1.08e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.40e-11;33!CL:0002057;1.40e-11;33!CL:0000791;1.37e-10;18!CL:0000789;1.37e-10;18!CL:0002419;1.37e-10;18!CL:0002087;1.90e-09;104!CL:0000473;2.88e-09;39!CL:0000234;2.88e-09;39!CL:0000576;4.87e-09;48!CL:0000766;1.39e-08;69!CL:0000542;1.89e-08;53!CL:0000084;3.40e-08;25!CL:0000738;6.32e-08;136!CL:0000625;1.09e-07;11!CL:0000236;5.37e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.39e-37,136;CL:0000037,6.95e-31,168;CL:0002031,1.22e-30,120;CL:0002032,1.46e-28,161;CL:0000837,1.46e-28,161;CL:0002087,3.18e-27,115;CL:0000988,7.91e-27,177;CL:0000766,8.32e-19,72;CL:0000557,1.60e-16,67;CL:0000839,1.18e-15,66;CL:0000763,6.68e-15,108;CL:0000049,6.68e-15,108;CL:0000860,3.65e-14,42;CL:0002057,3.65e-14,42;CL:0000838,1.04e-13,52;CL:0000542,1.40e-13,53;CL:0000051,1.40e-13,53;CL:0002009,2.11e-13,61;CL:0000473,3.05e-13,48;CL:0000234,3.05e-13,48;CL:0002194,2.31e-12,59;CL:0000576,2.31e-12,59;CL:0000040,2.31e-12,59;CL:0000559,2.31e-12,59;CL:0000791,1.44e-10,18;CL:0000789,1.44e-10,18;CL:0002420,1.44e-10,18;CL:0002419,1.44e-10,18;CL:0000790,1.44e-10,18;CL:0000084,3.64e-08,25;CL:0000827,3.64e-08,25;CL:0000625,1.08e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.37e-10;18!CL:0002057;1.84e-10;42!CL:0000051;1.89e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.87e-32!115;UBERON:0002390!3.26e-18!102;UBERON:0003061!3.26e-18!102;UBERON:0002193!3.90e-16!112;UBERON:0001049!2.80e-14!57;UBERON:0005068!2.80e-14!57;UBERON:0006241!2.80e-14!57;UBERON:0007135!2.80e-14!57;UBERON:0003080!3.68e-13!42;UBERON:0002780!5.39e-13!41;UBERON:0001890!5.39e-13!41;UBERON:0006240!5.39e-13!41;UBERON:0001017!8.41e-13!82;UBERON:0002616!1.73e-12!59;UBERON:0005743!8.42e-12!86;UBERON:0002371!1.38e-11!80;UBERON:0000955!1.43e-11!69;UBERON:0006238!1.43e-11!69;UBERON:0001474!2.82e-11!86;UBERON:0000073!3.63e-11!94;UBERON:0001016!3.63e-11!94;UBERON:0002020!2.68e-10!34;UBERON:0003528!2.68e-10!34;UBERON:0001893!3.01e-10!34;UBERON:0002791!4.57e-10!33;UBERON:0001869!1.36e-09!32;UBERON:0004765!1.51e-08!101;UBERON:0001434!1.51e-08!101;UBERON:0002405!3.01e-08!115;UBERON:0002619!5.11e-08!22;UBERON:0003075!1.25e-07!86;UBERON:0007284!1.25e-07!86;UBERON:0001950!1.25e-07!20;UBERON:0002346!1.36e-07!90;UBERON:0000956!2.22e-07!25;UBERON:0000203!2.22e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.02e-09;41!UBERON:0001890;1.02e-09;41!UBERON:0007023;2.72e-09;114!UBERON:0003528;5.78e-09;34!UBERON:0002020;5.78e-09;34!UBERON:0002791;5.99e-09;32!UBERON:0001893;7.16e-09;34!UBERON:0001869;8.36e-09;32!UBERON:0000073;3.07e-08;53!UBERON:0002616;3.07e-08;53!UBERON:0002619;5.19e-08;22!UBERON:0001950;1.27e-07;20!UBERON:0000956;2.15e-07;25!UBERON:0000203;2.15e-07;25 | |||
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| ||
|short_description=p1@MLL5 | |||
}} | }} |
Latest revision as of 20:55, 24 September 2015
Short description: | p1@MLL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MLL5_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000257745, ENST00000311117, ENST00000334877, ENST00000334884, ENST00000334914, ENST00000351043, ENST00000393656, ENST00000476671, ENST00000478990, ENST00000480368, ENST00000495267, NM_018682, NM_182931, uc003vcl.2, uc003vcm.2, uc010lja.1, uc010ljb.1, uc010ljc.2_5end |
EntrezGene: | MLL5 |
HGNC: | 18541 |
UniProt: | Q8IZD2E7ETZ7F8W6H1C9JYI9C9JNE1O95038 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.39e-32 | 114 |
hematopoietic system | 6.77e-20 | 98 |
blood island | 6.77e-20 | 98 |
hemolymphoid system | 1.41e-17 | 108 |
neural tube | 4.23e-14 | 56 |
neural rod | 4.23e-14 | 56 |
future spinal cord | 4.23e-14 | 56 |
neural keel | 4.23e-14 | 56 |
regional part of nervous system | 2.52e-13 | 53 |
regional part of brain | 2.52e-13 | 53 |
bone marrow | 5.04e-13 | 76 |
regional part of forebrain | 5.39e-13 | 41 |
forebrain | 5.39e-13 | 41 |
anterior neural tube | 5.39e-13 | 41 |
future forebrain | 5.39e-13 | 41 |
immune system | 6.39e-13 | 93 |
central nervous system | 1.28e-12 | 81 |
bone element | 1.30e-12 | 82 |
nervous system | 7.14e-12 | 89 |
brain | 2.17e-11 | 68 |
future brain | 2.17e-11 | 68 |
skeletal element | 1.54e-10 | 90 |
brain grey matter | 2.68e-10 | 34 |
gray matter | 2.68e-10 | 34 |
telencephalon | 3.01e-10 | 34 |
regional part of telencephalon | 8.50e-10 | 32 |
cerebral hemisphere | 1.36e-09 | 32 |
skeletal system | 4.64e-09 | 100 |
regional part of cerebral cortex | 5.11e-08 | 22 |
neural plate | 1.03e-07 | 82 |
presumptive neural plate | 1.03e-07 | 82 |
neurectoderm | 1.15e-07 | 86 |
neocortex | 1.25e-07 | 20 |
cerebral cortex | 2.22e-07 | 25 |
pallium | 2.22e-07 | 25 |