FFCP PHASE1:Hg19::chr7:107883678..107883689,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |EntrezGene=4897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |HGNC=7994 | ||
|TSSclassifier=strong | |||
|UniProt=C9JH43 | |UniProt=C9JH43 | ||
|association_with_transcript=0bp_to_ENST00000417701_5end | |association_with_transcript=0bp_to_ENST00000417701_5end | ||
|cluster_id=chr7:107883678..107883689,- | |||
|coexpression_cluster_id=C445 | |coexpression_cluster_id=C445 | ||
|description=CAGE_peak_13_at_NRCAM_5end | |description=CAGE_peak_13_at_NRCAM_5end | ||
|id=chr7:107883678..107883689,- | |id=chr7:107883678..107883689,- | ||
|ontology_enrichment_celltype=CL:0000064!4.72e-12!3;CL:0005012!4.72e-12!3;CL:0000067!4.72e-12!3;CL:0002304!4.72e-12!3;CL:0000306!1.26e-09!4;CL:0002222!1.26e-09!4;CL:0002224!1.26e-09!4 | |ontology_enrichment_celltype=CL:0000064!4.72e-12!3;CL:0005012!4.72e-12!3;CL:0000067!4.72e-12!3;CL:0002304!4.72e-12!3;CL:0000306!1.26e-09!4;CL:0002222!1.26e-09!4;CL:0002224!1.26e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000306;3.16e-29;4!CL:0002222;3.16e-29;4!CL:0002224;3.16e-29;4!CL:0000064;9.90e-11;3!CL:0000067;9.90e-11;3!CL:0005012;9.90e-11;3!CL:0002304;9.90e-11;3!CL:0000075;3.69e-10;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.65e-29,4;CL:0002222,3.65e-29,4;CL:0002224,3.65e-29,4;CL:0000064,1.20e-10,3;CL:0000067,1.20e-10,3;CL:0005012,1.20e-10,3;CL:0002304,1.20e-10,3;CL:0000075,4.06e-10,27 | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.37e-29;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.99e-31!86;UBERON:0007284!1.99e-31!86;UBERON:0002346!6.57e-30!90;UBERON:0002298!9.35e-26!8;UBERON:0001049!1.17e-25!57;UBERON:0005068!1.17e-25!57;UBERON:0006241!1.17e-25!57;UBERON:0007135!1.17e-25!57;UBERON:0000988!5.54e-25!3;UBERON:0002616!3.22e-21!59;UBERON:0000955!1.69e-20!69;UBERON:0006238!1.69e-20!69;UBERON:0001017!1.31e-19!82;UBERON:0003076!2.11e-19!15;UBERON:0003057!2.11e-19!15;UBERON:0005743!1.34e-18!86;UBERON:0000033!1.51e-18!123;UBERON:0001897!5.75e-18!2;UBERON:0001875!1.34e-17!2;UBERON:0006514!1.34e-17!2;UBERON:0000153!1.48e-17!129;UBERON:0007811!1.48e-17!129;UBERON:0003056!1.75e-17!61;UBERON:0002148!2.22e-17!2;UBERON:0009662!2.22e-17!2;UBERON:0004733!3.73e-17!12;UBERON:0002028!3.73e-17!12;UBERON:0007277!3.73e-17!12;UBERON:0000073!1.24e-16!94;UBERON:0001016!1.24e-16!94;UBERON:0004121!4.46e-16!169;UBERON:0004732!7.92e-16!13;UBERON:0000924!1.23e-15!173;UBERON:0006601!1.23e-15!173;UBERON:0002308!6.65e-15!9;UBERON:0000125!6.65e-15!9;UBERON:0007023!1.37e-13!115;UBERON:0007625!1.43e-12!11;UBERON:0001896!2.40e-12!3;UBERON:0005290!2.40e-12!3;UBERON:0010096!2.40e-12!3;UBERON:0001778!4.72e-12!3;UBERON:0001775!4.72e-12!3;UBERON:0006331!6.59e-12!3;UBERON:0002780!9.37e-12!41;UBERON:0001890!9.37e-12!41;UBERON:0006240!9.37e-12!41;UBERON:0001894!1.36e-11!7;UBERON:0006222!1.36e-11!7;UBERON:0003080!1.86e-11!42;UBERON:0001801!6.53e-10!14;UBERON:0002336!7.50e-10!1;UBERON:0001018!7.50e-10!1;UBERON:0002473!7.50e-10!1;UBERON:0005340!7.50e-10!1;UBERON:0002316!7.50e-10!1;UBERON:0003544!7.50e-10!1;UBERON:0001020!7.50e-10!1;UBERON:0005970!7.50e-10!1;UBERON:0002437!7.50e-10!1;UBERON:0002135!1.15e-09!1;UBERON:0010077!1.26e-09!4;UBERON:0005389!1.26e-09!4;UBERON:0000484!1.26e-09!4;UBERON:0002546!1.26e-09!4;UBERON:0000965!1.26e-09!4;UBERON:0001803!1.26e-09!4;UBERON:0003073!1.26e-09!4;UBERON:0005426!1.26e-09!4;UBERON:0002022!2.46e-09!1;UBERON:0000488!2.91e-09!4;UBERON:0002680!1.03e-08!9;UBERON:0001895!1.03e-08!9;UBERON:0010092!1.03e-08!9;UBERON:0000025!3.89e-08!194;UBERON:0002020!4.88e-08!34;UBERON:0003528!4.88e-08!34;UBERON:0000483!2.02e-07!309;UBERON:0000019!2.46e-07!19;UBERON:0000047!2.46e-07!19;UBERON:0004088!2.46e-07!19;UBERON:0003072!2.46e-07!19;UBERON:0003071!2.46e-07!19;UBERON:0004128!2.46e-07!19;UBERON:0000119!2.57e-07!312;UBERON:0000063!4.35e-07!97;UBERON:0000970!5.65e-07!20 | |ontology_enrichment_uberon=UBERON:0003075!1.99e-31!86;UBERON:0007284!1.99e-31!86;UBERON:0002346!6.57e-30!90;UBERON:0002298!9.35e-26!8;UBERON:0001049!1.17e-25!57;UBERON:0005068!1.17e-25!57;UBERON:0006241!1.17e-25!57;UBERON:0007135!1.17e-25!57;UBERON:0000988!5.54e-25!3;UBERON:0002616!3.22e-21!59;UBERON:0000955!1.69e-20!69;UBERON:0006238!1.69e-20!69;UBERON:0001017!1.31e-19!82;UBERON:0003076!2.11e-19!15;UBERON:0003057!2.11e-19!15;UBERON:0005743!1.34e-18!86;UBERON:0000033!1.51e-18!123;UBERON:0001897!5.75e-18!2;UBERON:0001875!1.34e-17!2;UBERON:0006514!1.34e-17!2;UBERON:0000153!1.48e-17!129;UBERON:0007811!1.48e-17!129;UBERON:0003056!1.75e-17!61;UBERON:0002148!2.22e-17!2;UBERON:0009662!2.22e-17!2;UBERON:0004733!3.73e-17!12;UBERON:0002028!3.73e-17!12;UBERON:0007277!3.73e-17!12;UBERON:0000073!1.24e-16!94;UBERON:0001016!1.24e-16!94;UBERON:0004121!4.46e-16!169;UBERON:0004732!7.92e-16!13;UBERON:0000924!1.23e-15!173;UBERON:0006601!1.23e-15!173;UBERON:0002308!6.65e-15!9;UBERON:0000125!6.65e-15!9;UBERON:0007023!1.37e-13!115;UBERON:0007625!1.43e-12!11;UBERON:0001896!2.40e-12!3;UBERON:0005290!2.40e-12!3;UBERON:0010096!2.40e-12!3;UBERON:0001778!4.72e-12!3;UBERON:0001775!4.72e-12!3;UBERON:0006331!6.59e-12!3;UBERON:0002780!9.37e-12!41;UBERON:0001890!9.37e-12!41;UBERON:0006240!9.37e-12!41;UBERON:0001894!1.36e-11!7;UBERON:0006222!1.36e-11!7;UBERON:0003080!1.86e-11!42;UBERON:0001801!6.53e-10!14;UBERON:0002336!7.50e-10!1;UBERON:0001018!7.50e-10!1;UBERON:0002473!7.50e-10!1;UBERON:0005340!7.50e-10!1;UBERON:0002316!7.50e-10!1;UBERON:0003544!7.50e-10!1;UBERON:0001020!7.50e-10!1;UBERON:0005970!7.50e-10!1;UBERON:0002437!7.50e-10!1;UBERON:0002135!1.15e-09!1;UBERON:0010077!1.26e-09!4;UBERON:0005389!1.26e-09!4;UBERON:0000484!1.26e-09!4;UBERON:0002546!1.26e-09!4;UBERON:0000965!1.26e-09!4;UBERON:0001803!1.26e-09!4;UBERON:0003073!1.26e-09!4;UBERON:0005426!1.26e-09!4;UBERON:0002022!2.46e-09!1;UBERON:0000488!2.91e-09!4;UBERON:0002680!1.03e-08!9;UBERON:0001895!1.03e-08!9;UBERON:0010092!1.03e-08!9;UBERON:0000025!3.89e-08!194;UBERON:0002020!4.88e-08!34;UBERON:0003528!4.88e-08!34;UBERON:0000483!2.02e-07!309;UBERON:0000019!2.46e-07!19;UBERON:0000047!2.46e-07!19;UBERON:0004088!2.46e-07!19;UBERON:0003072!2.46e-07!19;UBERON:0003071!2.46e-07!19;UBERON:0004128!2.46e-07!19;UBERON:0000119!2.57e-07!312;UBERON:0000063!4.35e-07!97;UBERON:0000970!5.65e-07!20 | ||
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|short_description=p13@NRCAM | |short_description=p13@NRCAM | ||
}} | }} |
Latest revision as of 02:37, 25 September 2015
Short description: | p13@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NRCAM_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | 0bp_to_ENST00000417701_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | C9JH43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.65e-29 | 4 |
vertebrate lens cell | 3.65e-29 | 4 |
lens epithelial cell | 3.65e-29 | 4 |
ciliated cell | 1.20e-10 | 3 |
ciliated epithelial cell | 1.20e-10 | 3 |
multi-ciliated epithelial cell | 1.20e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.20e-10 | 3 |
columnar/cuboidal epithelial cell | 4.06e-10 | 27 |