FFCP PHASE1:Mm9::chr10:100051839..100051903,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:100051839..100051903,-
|short_description=p1@4930430F08Rik
|description=CAGE_peak_1_at_4930430F08Rik_5end
|association_with_transcript=0bp_to_ENSMUST00000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68281 | |EntrezGene=68281 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHN7 | |UniProt=Q8BHN7 | ||
|association_with_transcript=0bp_to_ENSMUST00000054471,NM_175128,uc007gxx.2,uc007gxy.2_5end | |||
|cluster_id=chr10:100051839..100051903,- | |||
|description=CAGE_peak_1_at_4930430F08Rik_5end | |||
|id=chr10:100051839..100051903,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.09e-12!63;UBERON:0002346!5.21e-12!71;UBERON:0003075!5.21e-12!71;UBERON:0007284!5.21e-12!71;UBERON:0000955!8.31e-11!50;UBERON:0006238!8.31e-11!50;UBERON:0004121!1.14e-10!102;UBERON:0000924!1.14e-10!102;UBERON:0006601!1.14e-10!102;UBERON:0001049!1.40e-10!52;UBERON:0005068!1.40e-10!52;UBERON:0006241!1.40e-10!52;UBERON:0007135!1.40e-10!52;UBERON:0002616!2.39e-10!49;UBERON:0000475!5.26e-10!200;UBERON:0003056!9.58e-10!49;UBERON:0000073!8.15e-09!75;UBERON:0001016!8.15e-09!75;UBERON:0001017!2.80e-08!73;UBERON:0005743!2.80e-08!73;UBERON:0003080!3.33e-08!40;UBERON:0007811!5.65e-08!86;UBERON:0000153!5.79e-08!94;UBERON:0000025!8.78e-08!114;UBERON:0002780!1.16e-07!39;UBERON:0001890!1.16e-07!39;UBERON:0006240!1.16e-07!39;UBERON:0002020!1.78e-07!34;UBERON:0004111!1.85e-07!122;UBERON:0000468!2.77e-07!333;UBERON:0002021!5.09e-07!10;UBERON:0000411!5.09e-07!10;UBERON:0001950!5.09e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.87e-12,73;UBERON:0002346,8.91e-12,64;UBERON:0003075,8.91e-12,64;UBERON:0007284,8.91e-12,64;UBERON:0000073,2.25e-11,54;UBERON:0001049,1.40e-10,52;UBERON:0005068,1.40e-10,52;UBERON:0006241,1.40e-10,52;UBERON:0007135,1.40e-10,52;UBERON:0004121,3.26e-10,95;UBERON:0000924,3.26e-10,95;UBERON:0006601,3.26e-10,95;UBERON:0010314,3.34e-10,92;UBERON:0003056,9.58e-10,49;UBERON:0000955,1.71e-09,47;UBERON:0006238,1.71e-09,47;UBERON:0002616,4.73e-09,46;UBERON:0001016,8.26e-09,75;UBERON:0001017,2.84e-08,73;UBERON:0003080,3.33e-08,40;UBERON:0000025,8.78e-08,114;UBERON:0002780,1.16e-07,39;UBERON:0001890,1.16e-07,39;UBERON:0006240,1.16e-07,39;UBERON:0002020,1.78e-07,34;UBERON:0004111,1.85e-07,122;UBERON:0002021,5.09e-07,10;UBERON:0000411,5.09e-07,10;UBERON:0001950,5.09e-07,10 | |||
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| ||
|short_description=p1@4930430F08Rik | |||
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Latest revision as of 13:26, 25 September 2015
Short description: | p1@4930430F08Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_4930430F08Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000054471, NM_175128, uc007gxx.2, uc007gxy.2_5end |
EntrezGene: | 4930430F08Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.87e-12 | 73 |
neurectoderm | 8.91e-12 | 64 |
neural plate | 8.91e-12 | 64 |
presumptive neural plate | 8.91e-12 | 64 |
regional part of nervous system | 2.25e-11 | 54 |
neural tube | 1.40e-10 | 52 |
neural rod | 1.40e-10 | 52 |
future spinal cord | 1.40e-10 | 52 |
neural keel | 1.40e-10 | 52 |
ectoderm-derived structure | 3.26e-10 | 95 |
ectoderm | 3.26e-10 | 95 |
presumptive ectoderm | 3.26e-10 | 95 |
structure with developmental contribution from neural crest | 3.34e-10 | 92 |
pre-chordal neural plate | 9.58e-10 | 49 |
brain | 1.71e-09 | 47 |
future brain | 1.71e-09 | 47 |
regional part of brain | 4.73e-09 | 46 |
nervous system | 8.26e-09 | 75 |
central nervous system | 2.84e-08 | 73 |
anterior neural tube | 3.33e-08 | 40 |
tube | 8.78e-08 | 114 |
regional part of forebrain | 1.16e-07 | 39 |
forebrain | 1.16e-07 | 39 |
future forebrain | 1.16e-07 | 39 |
gray matter | 1.78e-07 | 34 |
anatomical conduit | 1.85e-07 | 122 |
occipital lobe | 5.09e-07 | 10 |
visual cortex | 5.09e-07 | 10 |
neocortex | 5.09e-07 | 10 |