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FFCP PHASE1:Mm9::chr8:48374708..48374738,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71069
|EntrezGene=71069
|HGNC=
|HGNC=
|MCL_coexpression_id=3678
|TSSclassifier=NA
|UniProt=Q499E5
|UniProt=Q499E5
|association_with_transcript=17bp_to_ENSMUST00000079195,NM_001114311,uc009lqw.2,uc009lqx.2_5end
|association_with_transcript=17bp_to_ENSMUST00000079195,NM_001114311,uc009lqw.2,uc009lqx.2_5end
|cluster_id=chr8:48374708..48374738,-
|description=CAGE_peak_1_at_Stox2_5end
|description=CAGE_peak_1_at_Stox2_5end
|id=chr8:48374708..48374738,-
|id=chr8:48374708..48374738,-
|ontology_enrichment_celltype=CL:0000221!6.03e-16!44;CL:0000133!6.03e-16!44;CL:0000540!1.40e-15!33;CL:0000047!1.40e-15!33;CL:0000031!1.40e-15!33;CL:0000404!1.40e-15!33;CL:0002319!1.65e-15!43;CL:0000117!6.68e-13!23;CL:0000337!6.68e-13!23;CL:0000393!9.89e-12!39;CL:0000211!9.89e-12!39;CL:0000055!1.74e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000221,1.00e-16,44;CL:0000133,1.00e-16,44;CL:0000540,1.84e-16,33;CL:0000047,1.84e-16,33;CL:0000031,1.84e-16,33;CL:0000404,1.84e-16,33;CL:0002319,2.92e-16,43;CL:0000117,1.29e-13,23;CL:0000337,1.29e-13,23;CL:0000393,1.64e-11,39;CL:0000211,1.64e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.28e-25!73;UBERON:0005743!4.28e-25!73;UBERON:0004121!8.20e-25!102;UBERON:0000924!8.20e-25!102;UBERON:0006601!8.20e-25!102;UBERON:0000073!9.14e-24!75;UBERON:0001016!9.14e-24!75;UBERON:0002346!5.21e-21!71;UBERON:0003075!5.21e-21!71;UBERON:0007284!5.21e-21!71;UBERON:0000033!8.58e-19!63;UBERON:0001049!2.83e-16!52;UBERON:0005068!2.83e-16!52;UBERON:0006241!2.83e-16!52;UBERON:0007135!2.83e-16!52;UBERON:0003056!4.48e-16!49;UBERON:0000955!1.51e-14!50;UBERON:0006238!1.51e-14!50;UBERON:0002616!4.00e-14!49;UBERON:0000468!4.36e-12!333;UBERON:0003080!6.46e-12!40;UBERON:0002780!2.19e-11!39;UBERON:0001890!2.19e-11!39;UBERON:0006240!2.19e-11!39;UBERON:0002020!7.81e-11!34;UBERON:0000922!7.06e-10!328;UBERON:0000153!2.29e-08!94;UBERON:0002791!3.95e-08!29;UBERON:0003528!3.95e-08!29;UBERON:0001893!3.95e-08!29;UBERON:0007811!3.74e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.97e-27,73;UBERON:0004121,2.54e-26,95;UBERON:0000924,2.54e-26,95;UBERON:0006601,2.54e-26,95;UBERON:0001016,4.84e-25,75;UBERON:0002346,9.86e-24,64;UBERON:0003075,9.86e-24,64;UBERON:0007284,9.86e-24,64;UBERON:0010314,3.06e-22,92;UBERON:0010371,1.38e-21,73;UBERON:0000073,3.16e-18,54;UBERON:0001049,2.24e-17,52;UBERON:0005068,2.24e-17,52;UBERON:0006241,2.24e-17,52;UBERON:0007135,2.24e-17,52;UBERON:0003056,5.46e-17,49;UBERON:0000955,4.02e-14,47;UBERON:0006238,4.02e-14,47;UBERON:0002616,1.11e-13,46;UBERON:0003080,1.44e-12,40;UBERON:0002780,5.28e-12,39;UBERON:0001890,5.28e-12,39;UBERON:0006240,5.28e-12,39;UBERON:0002020,2.04e-11,34;UBERON:0003528,1.52e-08,29;UBERON:0002791,1.52e-08,29;UBERON:0001893,1.52e-08,29;UBERON:0000922,1.37e-07,320
|phase1_expression=3.04282809499109,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.912392380975631,0.550640256485045,0,6.97680500417429,3.51497892375155,6.22175677037707,3.63964696225943,4.31257693094915,0,0,0,1.02903774414379,0.286533439938757,0,10.9250888864183,8.99284664762456,8.87363964908651,0.677689064138264,0,0,0,0,3.59520132622086,5.37905627450176,5.49554945234932,4.72520784160917,4.6271491497304,6.85562362569129,5.52171352379034,6.00204916153275,5.75072826109418,4.5960939330501,7.70811166995721,4.34136949489638,5.06901559745603,9.62769900430415,8.5083508550241,10.939180781692,5.862842979029,5.06486349028512,3.97275444219706,9.1334861496837,9.25415925194169,13.2343606535963,0.075726193333184,0.453429360640713,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,5.35204995151386,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,1.92974780784272,1.90833859442749,2.74018930480927,0.691846491768175,1.50722640552623,2.11659672844269,1.13099932196708,0,0.86759614151947,1.76922110389975,2.26473589926373,2.20841518460394,0.969750506270444,1.86391761218122,2.63502717310392,3.14170060220183,0.766371165625774,0,0,0,7.48953197024113,3.66000482254901,3.64397621127307,2.78118912307642,3.58001640262463,5.61027720310812,4.38051410282946,2.74966282395854,1.8661045591514,2.0217820674694,3.15662783829711,7.80722657776222,5.74755261083682,5.40186389416048,3.76762044589288,8.36848939561333,8.07116437794554,8.80796210861451,5.43277078551933,7.97601573851516,9.07709184805532,7.03804496655795,4.16471891612392,2.50242524303038,2.78601733217733,1.64625709126355,6.56813080501028,0,0,0,5.79952163099405,2.11073453982987,3.42117916775928,4.26140524053378,4.32881309844288,4.01094493507183,2.55787339225449,3.48755421819505,2.6856028744449,2.30383789878873,2.13417703302824,1.54030738137126,2.04679982395465,1.09775057645525,1.74468344388483,2.3131894342054,4.11618449517138,0.330418782983798,1.05780226665418,3.19932375802851,2.32236671860439,3.60828891701861,2.8235693447268,3.11329261382818,2.09248188723815,1.42358718463353,1.31759163779209,1.50801125280162,1.59165177632921,2.33956904542944,1.79763881730844,0.864552199498777,0.796565093017469,1.70701110857774,2.62771579002376,1.1270773567308,1.01825663922657,0.969762435838129,2.31448205638051,1.07502113111237,0.590440591918409,0.470996183524124,0.246794327843601,0,0.667380422864376,0.393117990226406,0,0.608580364165509,0,0,0.287696137450811,0,0.549122826376163,0,0.744281895337007,0,0,0,0,0.554259570499814,3.22135400009824,1.14075483509418,1.01847051465113,0.469380496577004,2.51259386162724,2.38043640886014,1.36593553500459,4.57141917907954,2.6575762757853,2.71073106717728,0.983179888294428,0.863424909329478,0.723245292907558,0,0,0.491764273019036,0.275936746304732,6.26147300952389,6.68106613575558,0,1.26235463602186,4.41711507182759,5.46614242015294,7.10897212518236,2.86762557543062,4.01037613348309,5.37845408498782,2.42886421004937,4.9683495844923,3.95287777946523,5.14114106274891,1.41940085208269,1.06839362200353,2.76907830901079,2.63952196756057,1.32745138339963,0.485561272309963,0,0.377210159511796,0.590603785761546,2.15204603560749,1.03371317267288,1.09060118843252,1.78248689192361,1.26414703174326,2.10837217149998,0,3.06395645178409,6.48219938512717,5.56242340265844,5.35842587578981,3.19212420556092,4.28085162244969,3.1264313914403,4.87143918583359,0.704015124191131,0.21183207086382,4.19003956304428,1.48397627647332,2.26050197374268,1.38719727334758,1.19372344003136,1.14898629821543,2.62332752966866,7.97328798645192,0.170870880797853,0.619160603889667,0.370389054739423,0.188368457004691,0,0,0,0,0,0,5.852215881251,4.06638934253697,3.24016022465404,1.67270636811575,2.40198820120795,1.07891477107857,1.90102948168273,1.30877970992015,0.90730481304255,1.24267862617385,0,14.204071874178,10.5893433892542,16.5283510092441,11.6243841129958,10.4752797804282,8.33236394384853,2.47388331203505,0.943734099831398,0.241584120826006,0,0,1.82452693761148,0.718976700153791,0.129920822977795,0.179026695667481,0.39736270956253,0.480781798079875,0.295379054349154,0,0.228620419965,0.302478555410522,0,0,0.350630706544707,0.906921534460845,0.221985953374065,0,0.167884616364078,0.19318959403219,1.12609485270709,0.73260649706906,0.643105137237198,2.00628841614145,4.51801474093653,3.22227665555024,1.14579102687879,2.06223818812425,4.11049511862385,2.2661816921691,1.35004500046361,1.80128481289688,3.62513927187364,2.5888015587591,7.9916257639816,12.369771075432,5.9756762013947,2.67417388775123,5.03071590307158,2.94149613520023,1.77797382241292,3.09052585858341,3.85103051510178,3.28506375292937,3.29523089857312,2.64076877940507,2.24739617927718,3.13723246783859,2.46972516509137,1.42888107384922,2.66533949673168,2.89363830695558,3.29668720642645,2.20798380201596,1.71434626192708,1.95223386775271,2.38436189947321,3.48831399917588,2.35273451038327,1.94613598150856,3.10977553883713,1.57841826862706,1.90125759384206,3.92799590160417,2.84724043498018,2.65962102414021,2.45538625901814,2.32405261778949,1.73615949883027,4.99621155875892,3.50897412668113,4.08255002691767,2.10417165275728,0.661774257358546,1.15933917810211
|phase1_expression=3.04282809499109,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.912392380975631,0.550640256485045,0,6.97680500417429,3.51497892375155,6.22175677037707,3.63964696225943,4.31257693094915,0,0,0,1.02903774414379,0.286533439938757,0,10.9250888864183,8.99284664762456,8.87363964908651,0.677689064138264,0,0,0,0,3.59520132622086,5.37905627450176,5.49554945234932,4.72520784160917,4.6271491497304,6.85562362569129,5.52171352379034,6.00204916153275,5.75072826109418,4.5960939330501,7.70811166995721,4.34136949489638,5.06901559745603,9.62769900430415,8.5083508550241,10.939180781692,5.862842979029,5.06486349028512,3.97275444219706,9.1334861496837,9.25415925194169,13.2343606535963,0.075726193333184,0.453429360640713,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,5.35204995151386,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,1.92974780784272,1.90833859442749,2.74018930480927,0.691846491768175,1.50722640552623,2.11659672844269,1.13099932196708,0,0.86759614151947,1.76922110389975,2.26473589926373,2.20841518460394,0.969750506270444,1.86391761218122,2.63502717310392,3.14170060220183,0.766371165625774,0,0,0,7.48953197024113,3.66000482254901,3.64397621127307,2.78118912307642,3.58001640262463,5.61027720310812,4.38051410282946,2.74966282395854,1.8661045591514,2.0217820674694,3.15662783829711,7.80722657776222,5.74755261083682,5.40186389416048,3.76762044589288,8.36848939561333,8.07116437794554,8.80796210861451,5.43277078551933,7.97601573851516,9.07709184805532,7.03804496655795,4.16471891612392,2.50242524303038,2.78601733217733,1.64625709126355,6.56813080501028,0,0,0,5.79952163099405,2.11073453982987,3.42117916775928,4.26140524053378,4.32881309844288,4.01094493507183,2.55787339225449,3.48755421819505,2.6856028744449,2.30383789878873,2.13417703302824,1.54030738137126,2.04679982395465,1.09775057645525,1.74468344388483,2.3131894342054,4.11618449517138,0.330418782983798,1.05780226665418,3.19932375802851,2.32236671860439,3.60828891701861,2.8235693447268,3.11329261382818,2.09248188723815,1.42358718463353,1.31759163779209,1.50801125280162,1.59165177632921,2.33956904542944,1.79763881730844,0.864552199498777,0.796565093017469,1.70701110857774,2.62771579002376,1.1270773567308,1.01825663922657,0.969762435838129,2.31448205638051,1.07502113111237,0.590440591918409,0.470996183524124,0.246794327843601,0,0.667380422864376,0.393117990226406,0,0.608580364165509,0,0,0.287696137450811,0,0.549122826376163,0,0.744281895337007,0,0,0,0,0.554259570499814,3.22135400009824,1.14075483509418,1.01847051465113,0.469380496577004,2.51259386162724,2.38043640886014,1.36593553500459,4.57141917907954,2.6575762757853,2.71073106717728,0.983179888294428,0.863424909329478,0.723245292907558,0,0,0.491764273019036,0.275936746304732,6.26147300952389,6.68106613575558,0,1.26235463602186,4.41711507182759,5.46614242015294,7.10897212518236,2.86762557543062,4.01037613348309,5.37845408498782,2.42886421004937,4.9683495844923,3.95287777946523,5.14114106274891,1.41940085208269,1.06839362200353,2.76907830901079,2.63952196756057,1.32745138339963,0.485561272309963,0,0.377210159511796,0.590603785761546,2.15204603560749,1.03371317267288,1.09060118843252,1.78248689192361,1.26414703174326,2.10837217149998,0,3.06395645178409,6.48219938512717,5.56242340265844,5.35842587578981,3.19212420556092,4.28085162244969,3.1264313914403,4.87143918583359,0.704015124191131,0.21183207086382,4.19003956304428,1.48397627647332,2.26050197374268,1.38719727334758,1.19372344003136,1.14898629821543,2.62332752966866,7.97328798645192,0.170870880797853,0.619160603889667,0.370389054739423,0.188368457004691,0,0,0,0,0,0,5.852215881251,4.06638934253697,3.24016022465404,1.67270636811575,2.40198820120795,1.07891477107857,1.90102948168273,1.30877970992015,0.90730481304255,1.24267862617385,0,14.204071874178,10.5893433892542,16.5283510092441,11.6243841129958,10.4752797804282,8.33236394384853,2.47388331203505,0.943734099831398,0.241584120826006,0,0,1.82452693761148,0.718976700153791,0.129920822977795,0.179026695667481,0.39736270956253,0.480781798079875,0.295379054349154,0,0.228620419965,0.302478555410522,0,0,0.350630706544707,0.906921534460845,0.221985953374065,0,0.167884616364078,0.19318959403219,1.12609485270709,0.73260649706906,0.643105137237198,2.00628841614145,4.51801474093653,3.22227665555024,1.14579102687879,2.06223818812425,4.11049511862385,2.2661816921691,1.35004500046361,1.80128481289688,3.62513927187364,2.5888015587591,7.9916257639816,12.369771075432,5.9756762013947,2.67417388775123,5.03071590307158,2.94149613520023,1.77797382241292,3.09052585858341,3.85103051510178,3.28506375292937,3.29523089857312,2.64076877940507,2.24739617927718,3.13723246783859,2.46972516509137,1.42888107384922,2.66533949673168,2.89363830695558,3.29668720642645,2.20798380201596,1.71434626192708,1.95223386775271,2.38436189947321,3.48831399917588,2.35273451038327,1.94613598150856,3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|short_description=p1@Stox2
|short_description=p1@Stox2
}}
}}

Latest revision as of 14:52, 25 September 2015

Short description:p1@Stox2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Stox2_5end
Coexpression cluster:MCL_coexpression_mm9:3678
Association with transcript: 17bp_to_ENSMUST00000079195, NM_001114311, uc009lqw.2, uc009lqx.2_5end
EntrezGene:Stox2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Stox2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.93
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.23
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C67.81
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C68.37
eyeball, neonate N01.CNhs11140.1532-43E78.07
eyeball, neonate N02.CNhs11205.1551-44G88.81
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E27.98
forelimb, embryo E12.CNhs10600.359-14H29.08
forelimb, embryo E13.CNhs10589.384-1E27.04
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G14.12
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C75.56
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F514.20
testis, embryo E15.CNhs11034.443-27C510.59
testis, embryo E16.CNhs11033.470-26G516.53
testis, embryo E17.CNhs11029.486-18I511.62
testis, embryo E18.CNhs11027.503-18G510.48
testis, neonate N00.CNhs11189.1300-22B78.33
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I87.99
whole body, embryo E12.CNhs10587.857-27C912.37
whole body, embryo E13.CNhs10512.372-23H25.98
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.00e-1644
neurectodermal cell1.00e-1644
neuron1.84e-1633
neuronal stem cell1.84e-1633
neuroblast1.84e-1633
electrically signaling cell1.84e-1633
neural cell2.92e-1643
CNS neuron (sensu Vertebrata)1.29e-1323
neuroblast (sensu Vertebrata)1.29e-1323
electrically responsive cell1.64e-1139
electrically active cell1.64e-1139

Uber anatomy
Ontology termp-valuen
central nervous system8.97e-2773
ectoderm-derived structure2.54e-2695
ectoderm2.54e-2695
presumptive ectoderm2.54e-2695
nervous system4.84e-2575
neurectoderm9.86e-2464
neural plate9.86e-2464
presumptive neural plate9.86e-2464
structure with developmental contribution from neural crest3.06e-2292
ecto-epithelium1.38e-2173
regional part of nervous system3.16e-1854
neural tube2.24e-1752
neural rod2.24e-1752
future spinal cord2.24e-1752
neural keel2.24e-1752
pre-chordal neural plate5.46e-1749
brain4.02e-1447
future brain4.02e-1447
regional part of brain1.11e-1346
anterior neural tube1.44e-1240
regional part of forebrain5.28e-1239
forebrain5.28e-1239
future forebrain5.28e-1239
gray matter2.04e-1134
brain grey matter1.52e-0829
regional part of telencephalon1.52e-0829
telencephalon1.52e-0829
embryo1.37e-07320
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