FFCP PHASE1:Mm9::chr14:14793700..14793713,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66231 | |EntrezGene=66231 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=208 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_uc007sgf.1,uc007sgh.1_5end | |association_with_transcript=25bp_to_uc007sgf.1,uc007sgh.1_5end | ||
|cluster_id=chr14:14793700..14793713,- | |||
|description=CAGE_peak_4_at_Thoc7_5end | |description=CAGE_peak_4_at_Thoc7_5end | ||
|id=chr14:14793700..14793713,- | |id=chr14:14793700..14793713,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.78e-11!63;UBERON:0000153!1.20e-10!94;UBERON:0001017!2.08e-10!73;UBERON:0005743!2.08e-10!73;UBERON:0007811!2.65e-10!86;UBERON:0001049!1.30e-09!52;UBERON:0005068!1.30e-09!52;UBERON:0006241!1.30e-09!52;UBERON:0007135!1.30e-09!52;UBERON:0000955!1.51e-09!50;UBERON:0006238!1.51e-09!50;UBERON:0000073!2.48e-09!75;UBERON:0001016!2.48e-09!75;UBERON:0002346!2.84e-09!71;UBERON:0003075!2.84e-09!71;UBERON:0007284!2.84e-09!71;UBERON:0002616!4.51e-09!49;UBERON:0003056!6.67e-09!49;UBERON:0004121!7.09e-08!102;UBERON:0000924!7.09e-08!102;UBERON:0006601!7.09e-08!102;UBERON:0002020!3.66e-07!34;UBERON:0003080!3.95e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.34e-14,64;UBERON:0003075,8.34e-14,64;UBERON:0007284,8.34e-14,64;UBERON:0001017,1.27e-13,73;UBERON:0000073,1.39e-13,54;UBERON:0001016,9.89e-13,75;UBERON:0001049,1.69e-12,52;UBERON:0005068,1.69e-12,52;UBERON:0006241,1.69e-12,52;UBERON:0007135,1.69e-12,52;UBERON:0010371,2.35e-12,73;UBERON:0004121,3.29e-12,95;UBERON:0000924,3.29e-12,95;UBERON:0006601,3.29e-12,95;UBERON:0000955,9.65e-11,47;UBERON:0006238,9.65e-11,47;UBERON:0003056,1.03e-10,49;UBERON:0002616,3.69e-10,46;UBERON:0003080,9.41e-09,40;UBERON:0010314,2.15e-08,92;UBERON:0002020,3.12e-08,34;UBERON:0002780,3.82e-08,39;UBERON:0001890,3.82e-08,39;UBERON:0006240,3.82e-08,39;UBERON:0002021,9.22e-08,10;UBERON:0000411,9.22e-08,10;UBERON:0001950,9.22e-08,10 | |||
|phase1_expression=1.92178616525753,2.79180326111489,1.36499771816861,2.41971369045464,5.50985302940982,0.503637815735669,0.934450562382103,0.387369970324729,0.281577444303333,1.40438715793196,0.34243593645101,0.558405112967355,0.684802919724823,0.611942816932982,0.333109761815663,0.404950534779652,0.699561878128147,0,0.274228867211478,0.42438965179803,3.99703463710028,0.595745707205312,0.783599367416806,0.319984845586813,0.22940928106717,1.72269589234506,0.430761996159075,1.07735616342945,0.760093677825496,0.504060259519861,0.886922042621219,0,0,0,1.1554064790051,0.498703936075477,0.612508068787107,0.418531630736908,0,1.0470474879476,0,0,0,0.125896817975577,0.405507724878058,1.10128051297009,0,0.218025156380447,0,0.388859798148567,0.419959264876088,0,0.838913030288682,0,0.336093799142464,0.771778308107841,0,0,1.21389876515759,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,0.299600110518405,0,1.03689612308478,0.675029691658453,0.841299845405528,1.14260393761521,1.32521124570968,1.10241719293459,1.24599112323707,0,2.20231761998777,4.97980618532232,2.30409799884365,0.923204014111357,1.55528994124096,0.52091337055676,2.79182999001381,5.06486349028512,2.59757021220577,1.47314292736834,2.13557521198654,2.05039390407831,0.075726193333184,0.151143120213571,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0.896053774194671,0.842666520790511,0.170430322578058,0,0.70667914902068,0.985903938436763,1.28326477414318,5.09610479413291,0,0,0.760079596425296,1.51657333504435,0.68510327831436,0.517875767294343,0.742210695324124,0.520455980298408,0.608930956624282,0.691846491768175,0.150722640552623,0.470354828542819,0.376999773989026,0.494389935468748,0,0,0.970601099684455,1.98757366614354,1.45462575940567,1.86391761218122,2.34224637609238,5.44561437714983,0,0.239630249011841,0,0.254140454146129,5.24267237916879,1.37250180845588,1.00523481690292,3.47648640384553,5.37002460393694,4.98691306942944,5.84068547043927,1.01839363850316,1.24406970610093,0.252722758433675,0.420883711772948,1.30120442962704,2.75882525320168,0.720248519221397,1.80845781402858,2.17716797284249,2.3060469651273,1.40552586839593,2.06962696591213,0.862271971731369,1.51284864134255,2.11141348996739,0.657587197282725,1.11218899690239,1.0447564995665,0.823128545631774,0.995171334092466,0,1.54408744268829,0,1.65700618028402,1.17263029990548,0.720248245844059,2.13070262026689,1.37734962223183,1.07986979021165,0,1.07309360559848,0.583826711835847,1.31647879930784,0.492502392237286,0.243206428637567,0.730999937126662,0,0.268412837520744,3.57492912559016,1.13195073617213,1.65209391491899,0.528901133327089,0.426576501070468,2.32236671860439,1.15980715189884,1.61346819698674,0.667134131534611,0.760902504450237,0,0.329397909448022,0.754005626400808,0.198956472041151,1.16978452271472,0.898819408654221,0.864552199498777,1.59313018603494,0.569003702859245,1.71372768914593,0,1.01825663922657,0.387904974335251,1.33258057791605,1.39120381673366,0.885660887877613,1.255989822731,1.35736880313981,0.296452627087149,0.500535317148282,0.196558995113203,0.674586337154561,0.811440485554012,0.241177159752417,0.763877555344259,1.15078454980324,0.648540907100142,0,1.43768206527355,1.11642284300551,1.24815069245824,0.252578877947112,0.538192240565737,1.4473305640901,0,0.757965647081939,1.14075483509418,0.169745085775188,0.469380496577004,0.502518772325447,1.19021820443007,0.195133647857799,0.788175720530955,0.664394068946325,0.637819074629948,0,0.690739927463582,0.289298117163023,0,0,1.96705709207614,0.551873492609465,4.65596710964597,5.50894926983355,0,0.757412781613119,1.26203287766503,0.780877488593277,0.861693590931196,1.19484398976276,1.55959071857676,1.13230612315533,1.21443210502468,1.16902343164525,0.395287777946524,2.89189184779626,0.425820255624806,0.35613120733451,0.325773918707152,0.659880491890142,1.32745138339963,0.971122544619926,1.51161778482376,0.188605079755898,0.590603785761546,1.22974059177571,1.80899805217755,1.45413491791002,1.06949213515416,0.316036757935816,2.10837217149998,0,2.38307724027652,2.34079422240703,0.258717367565509,1.28602221018955,1.41872186913819,0.178368817602071,1.31639216481697,0.304464949114599,0,1.0591603543191,0.220528398054962,1.6488625294148,0.322928853391811,0.603129249281559,0.358117032009409,0.328281799490123,0.582961673259701,4.45020724825223,0.512612642393558,1.03193433981611,0.185194527369712,0.565105371014073,0.136694227721025,0.457556346413045,0.339956859987711,0.279902904647316,0.276399947608848,2.86401185404534,1.10717597753397,0.813277868507395,0.540026704109006,1.46361807210128,0.87345025498471,0.809186078308924,0.743881101528023,0.785267825952089,0.777689839750757,0,7.89170114157866,1.19613236835183,0.330916980914195,0.388902376688095,0.129159823477731,0.506868376472335,0.352071715937262,0.911430693907651,0.734015410979976,8.45544422891021,5.47257011889944,2.21207784439725,0.608175645870493,1.23253148597793,1.42912905275575,0.358053391334963,0.993406773906324,1.08175904567972,1.03382669022204,1.61546319917036,1.143102099825,1.00826185136841,1.07203668813728,0.865906574762965,0.701261413089414,0.680191150845634,0.221985953374065,0.179427713218951,0.503653849092235,0.19318959403219,0.375364950902364,0.73260649706906,0.857473516316263,0,3.3885110557024,2.76195141904306,2.86447756719698,2.06223818812425,5.48066015816514,1.5107877947794,2.70009000092722,2.2516060161211,3.17199686288943,3.62432218226274,1.3492355185943,1.19707462020309,1.02440163452481,0.729320151204882,1.04806581313991,0.183843508450014,1.11123363900808,0.824140228955577,1.60459604795908,1.51618327058278,1.01391719956096,1.50901073108861,1.03005658216871,0.832326981263301,1.03383844120104,0.952587382566147,1.85414921511769,0.578727661391115,0.824171801606613,1.03039244094078,1.37147700954166,1.4198064492747,1.1921809497366,0.581385666529314,1.50575008664529,1.09998990259179,1.82927972872773,1.31534855718921,1.90125759384206,0.561142271657738,0.593175090620871,0.985044823755635,2.45538625901814,0.77468420592983,0.771626443924566,0.249810577937946,0.935726433781634,0.859484216193193,0.57386499620653,0.661774257358546,0.463735671240843 | |phase1_expression=1.92178616525753,2.79180326111489,1.36499771816861,2.41971369045464,5.50985302940982,0.503637815735669,0.934450562382103,0.387369970324729,0.281577444303333,1.40438715793196,0.34243593645101,0.558405112967355,0.684802919724823,0.611942816932982,0.333109761815663,0.404950534779652,0.699561878128147,0,0.274228867211478,0.42438965179803,3.99703463710028,0.595745707205312,0.783599367416806,0.319984845586813,0.22940928106717,1.72269589234506,0.430761996159075,1.07735616342945,0.760093677825496,0.504060259519861,0.886922042621219,0,0,0,1.1554064790051,0.498703936075477,0.612508068787107,0.418531630736908,0,1.0470474879476,0,0,0,0.125896817975577,0.405507724878058,1.10128051297009,0,0.218025156380447,0,0.388859798148567,0.419959264876088,0,0.838913030288682,0,0.336093799142464,0.771778308107841,0,0,1.21389876515759,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,0.299600110518405,0,1.03689612308478,0.675029691658453,0.841299845405528,1.14260393761521,1.32521124570968,1.10241719293459,1.24599112323707,0,2.20231761998777,4.97980618532232,2.30409799884365,0.923204014111357,1.55528994124096,0.52091337055676,2.79182999001381,5.06486349028512,2.59757021220577,1.47314292736834,2.13557521198654,2.05039390407831,0.075726193333184,0.151143120213571,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0.896053774194671,0.842666520790511,0.170430322578058,0,0.70667914902068,0.985903938436763,1.28326477414318,5.09610479413291,0,0,0.760079596425296,1.51657333504435,0.68510327831436,0.517875767294343,0.742210695324124,0.520455980298408,0.608930956624282,0.691846491768175,0.150722640552623,0.470354828542819,0.376999773989026,0.494389935468748,0,0,0.970601099684455,1.98757366614354,1.45462575940567,1.86391761218122,2.34224637609238,5.44561437714983,0,0.239630249011841,0,0.254140454146129,5.24267237916879,1.37250180845588,1.00523481690292,3.47648640384553,5.37002460393694,4.98691306942944,5.84068547043927,1.01839363850316,1.24406970610093,0.252722758433675,0.420883711772948,1.30120442962704,2.75882525320168,0.720248519221397,1.80845781402858,2.17716797284249,2.3060469651273,1.40552586839593,2.06962696591213,0.862271971731369,1.51284864134255,2.11141348996739,0.657587197282725,1.11218899690239,1.0447564995665,0.823128545631774,0.995171334092466,0,1.54408744268829,0,1.65700618028402,1.17263029990548,0.720248245844059,2.13070262026689,1.37734962223183,1.07986979021165,0,1.07309360559848,0.583826711835847,1.31647879930784,0.492502392237286,0.243206428637567,0.730999937126662,0,0.268412837520744,3.57492912559016,1.13195073617213,1.65209391491899,0.528901133327089,0.426576501070468,2.32236671860439,1.15980715189884,1.61346819698674,0.667134131534611,0.760902504450237,0,0.329397909448022,0.754005626400808,0.198956472041151,1.16978452271472,0.898819408654221,0.864552199498777,1.59313018603494,0.569003702859245,1.71372768914593,0,1.01825663922657,0.387904974335251,1.33258057791605,1.39120381673366,0.885660887877613,1.255989822731,1.35736880313981,0.296452627087149,0.500535317148282,0.196558995113203,0.674586337154561,0.811440485554012,0.241177159752417,0.763877555344259,1.15078454980324,0.648540907100142,0,1.43768206527355,1.11642284300551,1.24815069245824,0.252578877947112,0.538192240565737,1.4473305640901,0,0.757965647081939,1.14075483509418,0.169745085775188,0.469380496577004,0.502518772325447,1.19021820443007,0.195133647857799,0.788175720530955,0.664394068946325,0.637819074629948,0,0.690739927463582,0.289298117163023,0,0,1.96705709207614,0.551873492609465,4.65596710964597,5.50894926983355,0,0.757412781613119,1.26203287766503,0.780877488593277,0.861693590931196,1.19484398976276,1.55959071857676,1.13230612315533,1.21443210502468,1.16902343164525,0.395287777946524,2.89189184779626,0.425820255624806,0.35613120733451,0.325773918707152,0.659880491890142,1.32745138339963,0.971122544619926,1.51161778482376,0.188605079755898,0.590603785761546,1.22974059177571,1.80899805217755,1.45413491791002,1.06949213515416,0.316036757935816,2.10837217149998,0,2.38307724027652,2.34079422240703,0.258717367565509,1.28602221018955,1.41872186913819,0.178368817602071,1.31639216481697,0.304464949114599,0,1.0591603543191,0.220528398054962,1.6488625294148,0.322928853391811,0.603129249281559,0.358117032009409,0.328281799490123,0.582961673259701,4.45020724825223,0.512612642393558,1.03193433981611,0.185194527369712,0.565105371014073,0.136694227721025,0.457556346413045,0.339956859987711,0.279902904647316,0.276399947608848,2.86401185404534,1.10717597753397,0.813277868507395,0.540026704109006,1.46361807210128,0.87345025498471,0.809186078308924,0.743881101528023,0.785267825952089,0.777689839750757,0,7.89170114157866,1.19613236835183,0.330916980914195,0.388902376688095,0.129159823477731,0.506868376472335,0.352071715937262,0.911430693907651,0.734015410979976,8.45544422891021,5.47257011889944,2.21207784439725,0.608175645870493,1.23253148597793,1.42912905275575,0.358053391334963,0.993406773906324,1.08175904567972,1.03382669022204,1.61546319917036,1.143102099825,1.00826185136841,1.07203668813728,0.865906574762965,0.701261413089414,0.680191150845634,0.221985953374065,0.179427713218951,0.503653849092235,0.19318959403219,0.375364950902364,0.73260649706906,0.857473516316263,0,3.3885110557024,2.76195141904306,2.86447756719698,2.06223818812425,5.48066015816514,1.5107877947794,2.70009000092722,2.2516060161211,3.17199686288943,3.62432218226274,1.3492355185943,1.19707462020309,1.02440163452481,0.729320151204882,1.04806581313991,0.183843508450014,1.11123363900808,0.824140228955577,1.60459604795908,1.51618327058278,1.01391719956096,1.50901073108861,1.03005658216871,0.832326981263301,1.03383844120104,0.952587382566147,1.85414921511769,0.578727661391115,0.824171801606613,1.03039244094078,1.37147700954166,1.4198064492747,1.1921809497366,0.581385666529314,1.50575008664529,1.09998990259179,1.82927972872773,1.31534855718921,1.90125759384206,0.561142271657738,0.593175090620871,0.985044823755635,2.45538625901814,0.77468420592983,0.771626443924566,0.249810577937946,0.935726433781634,0.859484216193193,0.57386499620653,0.661774257358546,0.463735671240843 | ||
|short_description=p4@Thoc7 | |short_description=p4@Thoc7 | ||
}} | }} |
Latest revision as of 17:47, 25 September 2015
Short description: | p4@Thoc7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Thoc7_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | 25bp_to_uc007sgf.1, uc007sgh.1_5end |
EntrezGene: | Thoc7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 8.34e-14 | 64 |
neural plate | 8.34e-14 | 64 |
presumptive neural plate | 8.34e-14 | 64 |
central nervous system | 1.27e-13 | 73 |
regional part of nervous system | 1.39e-13 | 54 |
nervous system | 9.89e-13 | 75 |
neural tube | 1.69e-12 | 52 |
neural rod | 1.69e-12 | 52 |
future spinal cord | 1.69e-12 | 52 |
neural keel | 1.69e-12 | 52 |
ecto-epithelium | 2.35e-12 | 73 |
ectoderm-derived structure | 3.29e-12 | 95 |
ectoderm | 3.29e-12 | 95 |
presumptive ectoderm | 3.29e-12 | 95 |
brain | 9.65e-11 | 47 |
future brain | 9.65e-11 | 47 |
pre-chordal neural plate | 1.03e-10 | 49 |
regional part of brain | 3.69e-10 | 46 |
anterior neural tube | 9.41e-09 | 40 |
structure with developmental contribution from neural crest | 2.15e-08 | 92 |
gray matter | 3.12e-08 | 34 |
regional part of forebrain | 3.82e-08 | 39 |
forebrain | 3.82e-08 | 39 |
future forebrain | 3.82e-08 | 39 |
occipital lobe | 9.22e-08 | 10 |
visual cortex | 9.22e-08 | 10 |
neocortex | 9.22e-08 | 10 |