Personal tools

FFCP PHASE1:Mm9::chr3:86724255..86724270,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=70762
|EntrezGene=70762
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q6PGN3
|UniProt=Q6PGN3
|association_with_transcript=0bp_to_ENSMUST00000098983_5end
|association_with_transcript=0bp_to_ENSMUST00000098983_5end
|cluster_id=chr3:86724255..86724270,-
|description=CAGE_peak_6_at_Dclk2_5end
|description=CAGE_peak_6_at_Dclk2_5end
|id=chr3:86724255..86724270,-
|id=chr3:86724255..86724270,-
|ontology_enrichment_celltype=CL:0000221!9.14e-21!44;CL:0000133!9.14e-21!44;CL:0002319!3.52e-20!43;CL:0000055!1.03e-16!50;CL:0000540!1.71e-16!33;CL:0000047!1.71e-16!33;CL:0000031!1.71e-16!33;CL:0000404!1.71e-16!33;CL:0000117!6.57e-15!23;CL:0000337!6.57e-15!23;CL:0000393!9.71e-14!39;CL:0000211!9.71e-14!39;CL:0002321!3.00e-08!70;CL:0000220!3.00e-08!70
|ontology_enrichment_celltype=CL:0000221!9.14e-21!44;CL:0000133!9.14e-21!44;CL:0002319!3.52e-20!43;CL:0000055!1.03e-16!50;CL:0000540!1.71e-16!33;CL:0000047!1.71e-16!33;CL:0000031!1.71e-16!33;CL:0000404!1.71e-16!33;CL:0000117!6.57e-15!23;CL:0000337!6.57e-15!23;CL:0000393!9.71e-14!39;CL:0000211!9.71e-14!39;CL:0002321!3.00e-08!70;CL:0000220!3.00e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000221,3.12e-28,44;CL:0000133,3.12e-28,44;CL:0002319,4.37e-27,43;CL:0000540,3.37e-25,33;CL:0000047,3.37e-25,33;CL:0000031,3.37e-25,33;CL:0000404,3.37e-25,33;CL:0000117,2.39e-24,23;CL:0000337,2.39e-24,23;CL:0000393,7.20e-22,39;CL:0000211,7.20e-22,39;CL:0002321,1.56e-15,70;CL:0002609,2.57e-09,6;CL:0000723,2.37e-07,91;CL:0000048,2.37e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.51e-31!102;UBERON:0000924!3.51e-31!102;UBERON:0006601!3.51e-31!102;UBERON:0000073!5.02e-30!75;UBERON:0001016!5.02e-30!75;UBERON:0001017!4.37e-29!73;UBERON:0005743!4.37e-29!73;UBERON:0002346!4.90e-23!71;UBERON:0003075!4.90e-23!71;UBERON:0007284!4.90e-23!71;UBERON:0000033!4.73e-21!63;UBERON:0007811!3.58e-19!86;UBERON:0001049!1.42e-18!52;UBERON:0005068!1.42e-18!52;UBERON:0006241!1.42e-18!52;UBERON:0007135!1.42e-18!52;UBERON:0000955!7.45e-18!50;UBERON:0006238!7.45e-18!50;UBERON:0002616!4.14e-17!49;UBERON:0003056!5.29e-17!49;UBERON:0000153!3.64e-16!94;UBERON:0003080!4.14e-13!40;UBERON:0002780!1.02e-12!39;UBERON:0001890!1.02e-12!39;UBERON:0006240!1.02e-12!39;UBERON:0002020!4.13e-12!34;UBERON:0002791!1.85e-09!29;UBERON:0003528!1.85e-09!29;UBERON:0001893!1.85e-09!29
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.76e-34,95;UBERON:0000924,2.76e-34,95;UBERON:0006601,2.76e-34,95;UBERON:0001017,1.27e-30,73;UBERON:0001016,1.72e-29,75;UBERON:0002346,1.27e-25,64;UBERON:0003075,1.27e-25,64;UBERON:0007284,1.27e-25,64;UBERON:0010371,1.35e-22,73;UBERON:0000073,2.77e-18,54;UBERON:0001049,5.75e-16,52;UBERON:0005068,5.75e-16,52;UBERON:0006241,5.75e-16,52;UBERON:0007135,5.75e-16,52;UBERON:0010314,9.23e-16,92;UBERON:0003056,9.77e-16,49;UBERON:0002020,2.98e-13,34;UBERON:0000955,9.65e-13,47;UBERON:0006238,9.65e-13,47;UBERON:0002616,1.13e-11,46;UBERON:0003528,8.90e-10,29;UBERON:0002791,8.90e-10,29;UBERON:0001893,8.90e-10,29;UBERON:0000970,9.30e-10,9;UBERON:0000019,9.30e-10,9;UBERON:0000047,9.30e-10,9;UBERON:0010312,9.30e-10,9;UBERON:0004088,9.30e-10,9;UBERON:0002104,9.30e-10,9;UBERON:0001456,9.30e-10,9;UBERON:0003072,9.30e-10,9;UBERON:0004128,9.30e-10,9;UBERON:0003071,9.30e-10,9;UBERON:0002780,2.62e-09,39;UBERON:0001890,2.62e-09,39;UBERON:0006240,2.62e-09,39;UBERON:0003076,4.61e-09,12;UBERON:0003057,4.61e-09,12;UBERON:0003080,5.89e-09,40;UBERON:0000020,9.97e-09,12;UBERON:0001032,9.97e-09,12;UBERON:0004456,9.97e-09,12;UBERON:0000033,6.51e-08,13;UBERON:0005085,6.51e-08,13;UBERON:0001444,1.06e-07,11
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0,0,0.159544317990673,0,0,0,0,0,0.157731082679119,0.137114433605739,1.27316895539409,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.608261587317087,0,0,2.18025156380447,1.5378032791413,0.58328969722285,0.839918529752175,2.87505128729943,0.167782606057736,0,0,0,0,0,4.85559506063035,5.81890077199236,5.70448263155561,0,0,0,0,0,1.19840044207362,1.92109152660777,1.76272340924412,1.08004750665353,1.05162480675691,0.856952953211411,1.32521124570968,4.28717797252339,5.07980996396653,3.67687514644008,3.30347642998166,2.29837208553338,1.53606533256243,2.76961204233407,2.74462930807229,0.52091337055676,0.558365998002762,1.12552522006336,1.37518422999129,1.47314292736834,2.13557521198654,2.98239113320481,0.908714319998209,0.831287161174641,0.289864488701678,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0,0,0.258937883647172,0.593768556259299,0,0.608930956624282,0.461230994512117,0.452167921657868,0.352766121407114,0,0,0,0,0.161766849947409,0,0.484875253135222,0,1.75668478206928,1.25668024088073,0.255457055208591,0,0,0,0.898743836428936,1.37250180845588,2.1361239859187,0.347648640384553,0.767146371990992,0.83115217823824,1.78465389374533,0.203678727700633,0.124406970610093,0,0,1.04096354370163,1.37941262660084,2.34080768746954,1.9591626318643,1.90502197623718,2.0498195245576,2.24884138943349,1.03481348295606,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0,0,0,0,0.329119699826961,0,0,0,0,0,0.420579897128254,1.13195073617213,0,0,0,1.16118335930219,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0.837531287209079,0,0,0.472905432318573,0.221464689648775,0,0,0,0,0,0,0,0,1.9266070798535,0.937693492737625,0,0,1.57754109708128,0,3.01592756825919,1.19484398976276,0.891194696329576,2.26461224631066,0,0.876767573733936,1.58115111178609,3.85585579706168,0.283880170416537,0,0,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,1.36175842301515,1.08036656418786,0.905510786479282,0.428674070063185,0.532020700926821,0.178368817602071,0.987294123612726,0.913394847343798,0,0,0,0,0.322928853391811,0.301564624640779,0.238744688006273,0.492422699235184,0.291480836629851,1.48340241608408,0,0,0.185194527369712,0,0,0,0.509935289981566,0,0.276399947608848,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.516639293910924,0,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0.202725215290164,1.43795340030758,1.81889152168913,0.895133478337407,0.39736270956253,0.721172697119813,0.443068581523732,0.403865799792591,0.381034033274999,0.403304740547362,0.487289403698762,0.481059208201647,0.350630706544707,0,0,0,0,0,0,0,0.214368379079066,0,1.12950368523413,0.460325236507177,0,0.343706364687375,0.685082519770642,0,2.02506750069542,0.45032120322422,0,0.51776031175182,0.518936737920883,1.59609949360412,1.02440163452481,1.70174701947806,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0.377252682772152,0.468207537349412,0.256100609619477,0.402048282689293,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.883193520806384,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.658765662907314,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.689531376628944,0,0.464810523557898,0.192906610981141,0,0,0,0,0,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0,0,0.159544317990673,0,0,0,0,0,0.157731082679119,0.137114433605739,1.27316895539409,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.608261587317087,0,0,2.18025156380447,1.5378032791413,0.58328969722285,0.839918529752175,2.87505128729943,0.167782606057736,0,0,0,0,0,4.85559506063035,5.81890077199236,5.70448263155561,0,0,0,0,0,1.19840044207362,1.92109152660777,1.76272340924412,1.08004750665353,1.05162480675691,0.856952953211411,1.32521124570968,4.28717797252339,5.07980996396653,3.67687514644008,3.30347642998166,2.29837208553338,1.53606533256243,2.76961204233407,2.74462930807229,0.52091337055676,0.558365998002762,1.12552522006336,1.37518422999129,1.47314292736834,2.13557521198654,2.98239113320481,0.908714319998209,0.831287161174641,0.289864488701678,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0,0,0.258937883647172,0.593768556259299,0,0.608930956624282,0.461230994512117,0.452167921657868,0.352766121407114,0,0,0,0,0.161766849947409,0,0.484875253135222,0,1.75668478206928,1.25668024088073,0.255457055208591,0,0,0,0.898743836428936,1.37250180845588,2.1361239859187,0.347648640384553,0.767146371990992,0.83115217823824,1.78465389374533,0.203678727700633,0.124406970610093,0,0,1.04096354370163,1.37941262660084,2.34080768746954,1.9591626318643,1.90502197623718,2.0498195245576,2.24884138943349,1.03481348295606,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0,0,0,0,0.329119699826961,0,0,0,0,0,0.420579897128254,1.13195073617213,0,0,0,1.16118335930219,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0.837531287209079,0,0,0.472905432318573,0.221464689648775,0,0,0,0,0,0,0,0,1.9266070798535,0.937693492737625,0,0,1.57754109708128,0,3.01592756825919,1.19484398976276,0.891194696329576,2.26461224631066,0,0.876767573733936,1.58115111178609,3.85585579706168,0.283880170416537,0,0,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,1.36175842301515,1.08036656418786,0.905510786479282,0.428674070063185,0.532020700926821,0.178368817602071,0.987294123612726,0.913394847343798,0,0,0,0,0.322928853391811,0.301564624640779,0.238744688006273,0.492422699235184,0.291480836629851,1.48340241608408,0,0,0.185194527369712,0,0,0,0.509935289981566,0,0.276399947608848,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.516639293910924,0,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0.202725215290164,1.43795340030758,1.81889152168913,0.895133478337407,0.39736270956253,0.721172697119813,0.443068581523732,0.403865799792591,0.381034033274999,0.403304740547362,0.487289403698762,0.481059208201647,0.350630706544707,0,0,0,0,0,0,0,0.214368379079066,0,1.12950368523413,0.460325236507177,0,0.343706364687375,0.685082519770642,0,2.02506750069542,0.45032120322422,0,0.51776031175182,0.518936737920883,1.59609949360412,1.02440163452481,1.70174701947806,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0.377252682772152,0.468207537349412,0.256100609619477,0.402048282689293,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.883193520806384,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.658765662907314,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.689531376628944,0,0.464810523557898,0.192906610981141,0,0,0,0,0,0.231867835620421
|short_description=p6@Dclk2
|short_description=p6@Dclk2
}}
}}

Latest revision as of 18:54, 25 September 2015

Short description:p6@Dclk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Dclk2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000098983_5end
EntrezGene:Dclk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Dclk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.76e-3495
ectoderm2.76e-3495
presumptive ectoderm2.76e-3495
central nervous system1.27e-3073
nervous system1.72e-2975
neurectoderm1.27e-2564
neural plate1.27e-2564
presumptive neural plate1.27e-2564
ecto-epithelium1.35e-2273
regional part of nervous system2.77e-1854
neural tube5.75e-1652
neural rod5.75e-1652
future spinal cord5.75e-1652
neural keel5.75e-1652
structure with developmental contribution from neural crest9.23e-1692
pre-chordal neural plate9.77e-1649
gray matter2.98e-1334
brain9.65e-1347
future brain9.65e-1347
regional part of brain1.13e-1146
brain grey matter8.90e-1029
regional part of telencephalon8.90e-1029
telencephalon8.90e-1029
eye9.30e-109
camera-type eye9.30e-109
simple eye9.30e-109
immature eye9.30e-109
ocular region9.30e-109
visual system9.30e-109
face9.30e-109
optic cup9.30e-109
optic vesicle9.30e-109
eye primordium9.30e-109
regional part of forebrain2.62e-0939
forebrain2.62e-0939
future forebrain2.62e-0939
posterior neural tube4.61e-0912
chordal neural plate4.61e-0912
anterior neural tube5.89e-0940
sense organ9.97e-0912
sensory system9.97e-0912
entire sense organ system9.97e-0912
head6.51e-0813
ectodermal placode6.51e-0813
subdivision of head1.06e-0711
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:86724255..86724270,-&oldid=4208062"