FFCP PHASE1:Mm9::chr2:134611890..134611906,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18795 | |EntrezGene=18795 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z1B3,Q3UPW0,A2AW58 | |UniProt=Q9Z1B3,Q3UPW0,A2AW58 | ||
|association_with_transcript=0bp_to_ENSMUST00000110116,NM_001145830,NM_019677,uc008mnv.2,uc008mnw.2,uc008mnx.2,uc008mny.2,uc012ceu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000110116,NM_001145830,NM_019677,uc008mnv.2,uc008mnw.2,uc008mnx.2,uc008mny.2,uc012ceu.1_5end | ||
|cluster_id=chr2:134611890..134611906,+ | |||
|description=CAGE_peak_1_at_Plcb1_5end | |description=CAGE_peak_1_at_Plcb1_5end | ||
|id=chr2:134611890..134611906,+ | |id=chr2:134611890..134611906,+ | ||
|ontology_enrichment_celltype=CL:0000540!8.38e-10!33;CL:0000047!8.38e-10!33;CL:0000031!8.38e-10!33;CL:0000404!8.38e-10!33;CL:0000393!5.05e-07!39;CL:0000211!5.05e-07!39 | |ontology_enrichment_celltype=CL:0000540!8.38e-10!33;CL:0000047!8.38e-10!33;CL:0000031!8.38e-10!33;CL:0000404!8.38e-10!33;CL:0000393!5.05e-07!39;CL:0000211!5.05e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.08e-10,33;CL:0000047,8.08e-10,33;CL:0000031,8.08e-10,33;CL:0000404,8.08e-10,33;CL:0000393,4.93e-07,39;CL:0000211,4.93e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-14!73;UBERON:0005743!1.27e-14!73;UBERON:0000073!1.22e-13!75;UBERON:0001016!1.22e-13!75;UBERON:0002346!2.39e-12!71;UBERON:0003075!2.39e-12!71;UBERON:0007284!2.39e-12!71;UBERON:0004121!4.98e-12!102;UBERON:0000924!4.98e-12!102;UBERON:0006601!4.98e-12!102;UBERON:0002020!6.83e-12!34;UBERON:0000025!2.94e-11!114;UBERON:0001049!5.07e-11!52;UBERON:0005068!5.07e-11!52;UBERON:0006241!5.07e-11!52;UBERON:0007135!5.07e-11!52;UBERON:0000955!4.50e-10!50;UBERON:0006238!4.50e-10!50;UBERON:0000468!7.19e-10!333;UBERON:0005177!8.83e-10!85;UBERON:0002791!1.33e-09!29;UBERON:0003528!1.33e-09!29;UBERON:0001893!1.33e-09!29;UBERON:0004111!1.40e-09!122;UBERON:0002616!1.51e-09!49;UBERON:0002021!3.75e-08!10;UBERON:0000411!3.75e-08!10;UBERON:0001950!3.75e-08!10;UBERON:0000956!5.82e-08!21;UBERON:0001869!5.82e-08!21;UBERON:0000203!5.82e-08!21;UBERON:0003080!7.88e-08!40;UBERON:0002780!2.29e-07!39;UBERON:0001890!2.29e-07!39;UBERON:0006240!2.29e-07!39;UBERON:0000479!2.54e-07!349;UBERON:0000922!5.16e-07!328;UBERON:0002100!7.04e-07!98;UBERON:0000475!8.36e-07!200 | |ontology_enrichment_uberon=UBERON:0001017!1.27e-14!73;UBERON:0005743!1.27e-14!73;UBERON:0000073!1.22e-13!75;UBERON:0001016!1.22e-13!75;UBERON:0002346!2.39e-12!71;UBERON:0003075!2.39e-12!71;UBERON:0007284!2.39e-12!71;UBERON:0004121!4.98e-12!102;UBERON:0000924!4.98e-12!102;UBERON:0006601!4.98e-12!102;UBERON:0002020!6.83e-12!34;UBERON:0000025!2.94e-11!114;UBERON:0001049!5.07e-11!52;UBERON:0005068!5.07e-11!52;UBERON:0006241!5.07e-11!52;UBERON:0007135!5.07e-11!52;UBERON:0000955!4.50e-10!50;UBERON:0006238!4.50e-10!50;UBERON:0000468!7.19e-10!333;UBERON:0005177!8.83e-10!85;UBERON:0002791!1.33e-09!29;UBERON:0003528!1.33e-09!29;UBERON:0001893!1.33e-09!29;UBERON:0004111!1.40e-09!122;UBERON:0002616!1.51e-09!49;UBERON:0002021!3.75e-08!10;UBERON:0000411!3.75e-08!10;UBERON:0001950!3.75e-08!10;UBERON:0000956!5.82e-08!21;UBERON:0001869!5.82e-08!21;UBERON:0000203!5.82e-08!21;UBERON:0003080!7.88e-08!40;UBERON:0002780!2.29e-07!39;UBERON:0001890!2.29e-07!39;UBERON:0006240!2.29e-07!39;UBERON:0000479!2.54e-07!349;UBERON:0000922!5.16e-07!328;UBERON:0002100!7.04e-07!98;UBERON:0000475!8.36e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-14,73;UBERON:0001016,1.03e-13,75;UBERON:0002020,6.52e-12,34;UBERON:0000073,1.05e-11,54;UBERON:0000025,2.82e-11,114;UBERON:0001049,4.86e-11,52;UBERON:0005068,4.86e-11,52;UBERON:0006241,4.86e-11,52;UBERON:0007135,4.86e-11,52;UBERON:0002346,1.23e-09,64;UBERON:0003075,1.23e-09,64;UBERON:0007284,1.23e-09,64;UBERON:0003528,1.28e-09,29;UBERON:0002791,1.28e-09,29;UBERON:0001893,1.28e-09,29;UBERON:0004111,1.35e-09,122;UBERON:0004121,1.64e-09,95;UBERON:0000924,1.64e-09,95;UBERON:0006601,1.64e-09,95;UBERON:0000955,5.43e-09,47;UBERON:0006238,5.43e-09,47;UBERON:0002616,1.75e-08,46;UBERON:0002021,3.65e-08,10;UBERON:0000411,3.65e-08,10;UBERON:0001950,3.65e-08,10;UBERON:0000956,5.65e-08,21;UBERON:0001869,5.65e-08,21;UBERON:0000203,5.65e-08,21;UBERON:0010371,5.71e-08,73;UBERON:0003080,7.67e-08,40;UBERON:0010314,7.99e-08,92;UBERON:0005177,1.61e-07,79;UBERON:0002780,2.24e-07,39;UBERON:0001890,2.24e-07,39;UBERON:0006240,2.24e-07,39;UBERON:0000479,2.62e-07,349 | |||
|phase1_expression=2.24208385946712,0.348975407639361,0,0.60492842261366,0.500895729946347,4.36486106970913,4.43864017131499,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,1.39912375625629,0.630924330716475,0.959801035240171,1.27316895539409,26.7035931074359,0,0,0.319984845586813,0.22940928106717,0,1.29228598847722,1.939241094173,5.13063232532209,2.52030129759931,1.33038306393183,0,0,0,0.866554859253824,1.16364251750945,1.42918549383658,7.53356935326434,12.5013655123808,7.85285615960697,0.588231488031014,2.04913645487534,0,5.5394599909254,6.2853697356099,1.83546752161682,2.34717403304412,2.18025156380447,2.85592037554813,3.11087838518853,3.07970127575798,0,0,0.725362142011344,0,1.02903774414379,3.43840127926508,11.8604581223812,16.9945827122062,16.398720357433,17.747279298173,2.71075625655306,5.33576877666684,0.899899717281399,2.96659908770092,0.7104801149461,3.59520132622086,3.45796474789399,30.5884356310009,20.6559085647487,26.7112700916255,23.7090317055157,30.7007271922743,17.6386750869534,11.5014565221884,11.9498442259303,31.9336054898227,28.3465890549117,32.4109785170674,13.7161739239402,12.1678565991205,11.4600941522487,21.7762739221077,28.138130501584,36.5187812186576,80.1389752488376,49.6877165988869,61.6982165681745,3.25622631332691,3.92972112555285,19.7107852317141,20.6501730475533,8.83962733820076,22.6675340487883,40.9359142992032,36.2901778548842,12.3591089715942,8.69194645148094,5.45550609666024,6.36011234118612,1.83096445709685,10.2661181931454,12.7402619853323,0,0.865964164044856,0.506719730950197,1.01104889002957,12.1034912502204,4.66088190564909,107.768992961063,17.1750473498474,28.6197549613413,32.9780161076164,39.1878865436819,45.5068296615178,52.0259688104856,3.46072954828123,18.3641183288288,2.65383165584962,11.0001457964238,5.52103796150984,10.6672555689749,13.0474232852686,46.2593659278244,44.4027018444525,7.15279754584056,1.43778149407104,0.599902730993408,2.54140454146129,68.7539034868136,242.475319493872,39.832429619778,168.261941946124,188.462292052454,55.4794078974025,103.185443311094,18.025567401506,13.6847667671102,7.32895999457657,3.36706969418358,4.94457683258274,6.66716102857071,5.40186389416048,6.32960234910003,6.25935792192216,7.17436833595159,6.46541899462129,11.9003550539947,7.54487975264948,12.4810012910761,16.8913079197391,6.1374805079721,14.7365042089567,12.8853301613202,12.9642745937004,7.76233640592123,6.31991868581911,3.60287069960601,4.54661599032948,4.97101854085205,6.56672967947069,4.68161359798639,8.52281048106757,2.95146347621106,4.9365476123961,4.18561100550734,6.9751084363901,7.12268588439734,5.26591519723137,11.984224877774,15.4030738137126,12.5731989185786,12.7339066868809,12.8838162009957,124.701939498527,31.0771929385439,4.29544417878937,6.08236303326152,6.82522401712749,7.43157349953403,8.76298736990235,15.327947871374,7.11609740303585,11.223311940641,7.11793592316767,11.6936257854048,11.5614196048124,12.5342577385925,12.0877734013854,4.49409704327111,9.07779809473716,9.35963984295526,7.77638393907635,25.3631697993598,28.1769339182701,26.8819752755815,30.062635510982,31.0701682114111,37.8154492003059,25.6841657484508,33.2837303023715,31.8364682918245,30.2381679628892,4.00428253718626,5.89676985339609,7.64531182108503,6.49152388443209,9.64708639009667,15.0229252551038,11.7955416354832,15.8892522239535,11.5315793538994,17.2521847832825,21.2120340171047,18.0981850406445,33.845569644913,21.1688947955856,15.9206362049911,18.8448253969937,12.6959245886225,19.5557971730431,13.2401166904647,14.3161051455986,14.0705256251125,14.7587057349329,10.7323506321789,22.3841904630791,17.2742457926044,26.9478559031153,32.6087996284319,20.5495128420416,24.3010418416939,0,0,15.7364567366092,11.0374698521893,44.9541651965817,52.0419888469382,2.45902418065013,9.08895337935743,38.1764945493671,32.7968545209176,67.8583702858317,87.462580050634,128.777633619624,141.821341925205,36.4329631507405,42.3770993971402,58.897878914032,173.192189551354,16.4650498841592,11.3961986347043,24.7588178217436,28.2098910283036,37.1686387351896,6.5550771761845,5.74414758233027,13.5795657424247,14.1744908582771,19.9832846163553,19.898978573953,20.7214225802178,16.0423820273125,36.9763006784905,28.4630243152497,29.9093075419742,21.4476951624886,2.88097750450096,1.4229455216103,4.07240366560025,4.96552654198366,5.35106452806212,8.22745103010605,4.87143918583359,1.17335854031855,1.48282449604674,6.17479514553893,4.78170133530292,14.6932628293274,8.38349656501366,6.2073618881631,7.55048138827282,10.2018292820448,50.4356821468586,2.56306321196779,7.22354037871279,11.2968661695524,3.76736914009382,2.46049609897845,1.14389086603261,0.679913719975421,1.11961161858926,0.690999869022119,5.72802370809068,7.27572785236611,15.6555989687673,12.8526355577944,19.0270349373167,15.5037420259786,14.1607563704062,18.1011068038486,14.9200886930897,11.0172727298024,9.94142900939081,3.94585057078933,2.39226473670366,1.82004339502807,5.63908446197738,4.26227417476513,3.04121025883401,8.33236394384853,7.29144555126121,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|phase1_expression=2.24208385946712,0.348975407639361,0,0.60492842261366,0.500895729946347,4.36486106970913,4.43864017131499,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,1.39912375625629,0.630924330716475,0.959801035240171,1.27316895539409,26.7035931074359,0,0,0.319984845586813,0.22940928106717,0,1.29228598847722,1.939241094173,5.13063232532209,2.52030129759931,1.33038306393183,0,0,0,0.866554859253824,1.16364251750945,1.42918549383658,7.53356935326434,12.5013655123808,7.85285615960697,0.588231488031014,2.04913645487534,0,5.5394599909254,6.2853697356099,1.83546752161682,2.34717403304412,2.18025156380447,2.85592037554813,3.11087838518853,3.07970127575798,0,0,0.725362142011344,0,1.02903774414379,3.43840127926508,11.8604581223812,16.9945827122062,16.398720357433,17.747279298173,2.71075625655306,5.33576877666684,0.899899717281399,2.96659908770092,0.7104801149461,3.59520132622086,3.45796474789399,30.5884356310009,20.6559085647487,26.7112700916255,23.7090317055157,30.7007271922743,17.6386750869534,11.5014565221884,11.9498442259303,31.9336054898227,28.3465890549117,32.4109785170674,13.7161739239402,12.1678565991205,11.4600941522487,21.7762739221077,28.138130501584,36.5187812186576,80.1389752488376,49.6877165988869,61.6982165681745,3.25622631332691,3.92972112555285,19.7107852317141,20.6501730475533,8.83962733820076,22.6675340487883,40.9359142992032,36.2901778548842,12.3591089715942,8.69194645148094,5.45550609666024,6.36011234118612,1.83096445709685,10.2661181931454,12.7402619853323,0,0.865964164044856,0.506719730950197,1.01104889002957,12.1034912502204,4.66088190564909,107.768992961063,17.1750473498474,28.6197549613413,32.9780161076164,39.1878865436819,45.5068296615178,52.0259688104856,3.46072954828123,18.3641183288288,2.65383165584962,11.0001457964238,5.52103796150984,10.6672555689749,13.0474232852686,46.2593659278244,44.4027018444525,7.15279754584056,1.43778149407104,0.599902730993408,2.54140454146129,68.7539034868136,242.475319493872,39.832429619778,168.261941946124,188.462292052454,55.4794078974025,103.185443311094,18.025567401506,13.6847667671102,7.32895999457657,3.36706969418358,4.94457683258274,6.66716102857071,5.40186389416048,6.32960234910003,6.25935792192216,7.17436833595159,6.46541899462129,11.9003550539947,7.54487975264948,12.4810012910761,16.8913079197391,6.1374805079721,14.7365042089567,12.8853301613202,12.9642745937004,7.76233640592123,6.31991868581911,3.60287069960601,4.54661599032948,4.97101854085205,6.56672967947069,4.68161359798639,8.52281048106757,2.95146347621106,4.9365476123961,4.18561100550734,6.9751084363901,7.12268588439734,5.26591519723137,11.984224877774,15.4030738137126,12.5731989185786,12.7339066868809,12.8838162009957,124.701939498527,31.0771929385439,4.29544417878937,6.08236303326152,6.82522401712749,7.43157349953403,8.76298736990235,15.327947871374,7.11609740303585,11.223311940641,7.11793592316767,11.6936257854048,11.5614196048124,12.5342577385925,12.0877734013854,4.49409704327111,9.07779809473716,9.35963984295526,7.77638393907635,25.3631697993598,28.1769339182701,26.8819752755815,30.062635510982,31.0701682114111,37.8154492003059,25.6841657484508,33.2837303023715,31.8364682918245,30.2381679628892,4.00428253718626,5.89676985339609,7.64531182108503,6.49152388443209,9.64708639009667,15.0229252551038,11.7955416354832,15.8892522239535,11.5315793538994,17.2521847832825,21.2120340171047,18.0981850406445,33.845569644913,21.1688947955856,15.9206362049911,18.8448253969937,12.6959245886225,19.5557971730431,13.2401166904647,14.3161051455986,14.0705256251125,14.7587057349329,10.7323506321789,22.3841904630791,17.2742457926044,26.9478559031153,32.6087996284319,20.5495128420416,24.3010418416939,0,0,15.7364567366092,11.0374698521893,44.9541651965817,52.0419888469382,2.45902418065013,9.08895337935743,38.1764945493671,32.7968545209176,67.8583702858317,87.462580050634,128.777633619624,141.821341925205,36.4329631507405,42.3770993971402,58.897878914032,173.192189551354,16.4650498841592,11.3961986347043,24.7588178217436,28.2098910283036,37.1686387351896,6.5550771761845,5.74414758233027,13.5795657424247,14.1744908582771,19.9832846163553,19.898978573953,20.7214225802178,16.0423820273125,36.9763006784905,28.4630243152497,29.9093075419742,21.4476951624886,2.88097750450096,1.4229455216103,4.07240366560025,4.96552654198366,5.35106452806212,8.22745103010605,4.87143918583359,1.17335854031855,1.48282449604674,6.17479514553893,4.78170133530292,14.6932628293274,8.38349656501366,6.2073618881631,7.55048138827282,10.2018292820448,50.4356821468586,2.56306321196779,7.22354037871279,11.2968661695524,3.76736914009382,2.46049609897845,1.14389086603261,0.679913719975421,1.11961161858926,0.690999869022119,5.72802370809068,7.27572785236611,15.6555989687673,12.8526355577944,19.0270349373167,15.5037420259786,14.1607563704062,18.1011068038486,14.9200886930897,11.0172727298024,9.94142900939081,3.94585057078933,2.39226473670366,1.82004339502807,5.63908446197738,4.26227417476513,3.04121025883401,8.33236394384853,7.29144555126121,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| ||
|short_description=p1@Plcb1 | |short_description=p1@Plcb1 | ||
}} | }} |
Latest revision as of 19:10, 25 September 2015
Short description: | p1@Plcb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Plcb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000110116, NM_001145830, NM_019677, uc008mnv.2, uc008mnw.2, uc008mnx.2, uc008mny.2, uc012ceu.1_5end |
EntrezGene: | Plcb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.08e-10 | 33 |
neuronal stem cell | 8.08e-10 | 33 |
neuroblast | 8.08e-10 | 33 |
electrically signaling cell | 8.08e-10 | 33 |
electrically responsive cell | 4.93e-07 | 39 |
electrically active cell | 4.93e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.06e-14 | 73 |
nervous system | 1.03e-13 | 75 |
gray matter | 6.52e-12 | 34 |
regional part of nervous system | 1.05e-11 | 54 |
tube | 2.82e-11 | 114 |
neural tube | 4.86e-11 | 52 |
neural rod | 4.86e-11 | 52 |
future spinal cord | 4.86e-11 | 52 |
neural keel | 4.86e-11 | 52 |
neurectoderm | 1.23e-09 | 64 |
neural plate | 1.23e-09 | 64 |
presumptive neural plate | 1.23e-09 | 64 |
brain grey matter | 1.28e-09 | 29 |
regional part of telencephalon | 1.28e-09 | 29 |
telencephalon | 1.28e-09 | 29 |
anatomical conduit | 1.35e-09 | 122 |
ectoderm-derived structure | 1.64e-09 | 95 |
ectoderm | 1.64e-09 | 95 |
presumptive ectoderm | 1.64e-09 | 95 |
brain | 5.43e-09 | 47 |
future brain | 5.43e-09 | 47 |
regional part of brain | 1.75e-08 | 46 |
occipital lobe | 3.65e-08 | 10 |
visual cortex | 3.65e-08 | 10 |
neocortex | 3.65e-08 | 10 |
cerebral cortex | 5.65e-08 | 21 |
cerebral hemisphere | 5.65e-08 | 21 |
pallium | 5.65e-08 | 21 |
ecto-epithelium | 5.71e-08 | 73 |
anterior neural tube | 7.67e-08 | 40 |
structure with developmental contribution from neural crest | 7.99e-08 | 92 |
trunk region element | 1.61e-07 | 79 |
regional part of forebrain | 2.24e-07 | 39 |
forebrain | 2.24e-07 | 39 |
future forebrain | 2.24e-07 | 39 |
tissue | 2.62e-07 | 349 |