FFCP PHASE1:Mm9::chr5:18732560..18732618,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:18732560..18732618,+
|short_description=p4@Magi2
|description=CAGE_peak_4_at_Magi2_5end
|association_with_transcript=-245bp_to_ENSMUST00000088516,NM_001170...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=50791 | |EntrezGene=50791 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9WVQ1 | |UniProt=Q9WVQ1 | ||
|association_with_transcript=-245bp_to_ENSMUST00000088516,NM_001170746,uc012dsm.1_5end | |||
|cluster_id=chr5:18732560..18732618,+ | |||
|description=CAGE_peak_4_at_Magi2_5end | |||
|id=chr5:18732560..18732618,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.50e-15!75;UBERON:0001016!3.50e-15!75;UBERON:0004121!7.33e-15!102;UBERON:0000924!7.33e-15!102;UBERON:0006601!7.33e-15!102;UBERON:0001017!1.36e-14!73;UBERON:0005743!1.36e-14!73;UBERON:0002346!3.89e-14!71;UBERON:0003075!3.89e-14!71;UBERON:0007284!3.89e-14!71;UBERON:0000033!2.90e-13!63;UBERON:0001049!4.43e-11!52;UBERON:0005068!4.43e-11!52;UBERON:0006241!4.43e-11!52;UBERON:0007135!4.43e-11!52;UBERON:0003056!6.88e-11!49;UBERON:0000955!1.10e-10!50;UBERON:0006238!1.10e-10!50;UBERON:0002616!3.43e-10!49;UBERON:0000489!5.21e-09!21;UBERON:0003103!6.22e-08!43;UBERON:0003080!1.64e-07!40;UBERON:0002780!5.39e-07!39;UBERON:0001890!5.39e-07!39;UBERON:0006240!5.39e-07!39;UBERON:0000025!5.79e-07!114;UBERON:0004111!9.33e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.73e-15,64;UBERON:0003075,1.73e-15,64;UBERON:0007284,1.73e-15,64;UBERON:0001016,2.23e-14,75;UBERON:0004121,3.96e-14,95;UBERON:0000924,3.96e-14,95;UBERON:0006601,3.96e-14,95;UBERON:0010314,8.42e-14,92;UBERON:0001017,9.33e-14,73;UBERON:0000073,7.40e-12,54;UBERON:0010371,1.75e-11,73;UBERON:0003056,3.78e-11,49;UBERON:0001049,5.28e-11,52;UBERON:0005068,5.28e-11,52;UBERON:0006241,5.28e-11,52;UBERON:0007135,5.28e-11,52;UBERON:0000489,2.12e-09,21;UBERON:0000955,3.56e-09,47;UBERON:0006238,3.56e-09,47;UBERON:0002616,1.13e-08,46;UBERON:0003080,1.61e-07,40;UBERON:0003103,3.22e-07,43;UBERON:0002780,5.68e-07,39;UBERON:0001890,5.68e-07,39;UBERON:0006240,5.68e-07,39;UBERON:0002020,9.65e-07,34 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03587271902309,4.56196190487815,2.9367480345869,0.782391344348039,0.218025156380447,0.439372365468944,1.94429899074283,0.699932108126813,2.87505128729943,0,0,0,2.05807548828758,4.58453503902011,2.57836046138721,3.23706337375356,3.70293685490423,0.633831403506179,2.03306719241479,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0.384218305321555,1.34796496001021,0.675029691658453,0.210324961351382,2.57085885963423,2.87129103237098,1.22490799214954,0.766763768145891,0,3.30347642998166,6.51205424234457,8.90917892886212,1.97829431595291,1.37231465403614,0,6.14202597803038,5.06486349028512,6.57032465440283,5.59794312399969,5.69486723196412,2.60959224155421,2.42323818666189,3.17400552448499,0.579728977403356,0,0,0,0,0,0.702222100658759,1.87473354835864,2.07828803682295,3.18005617059306,0.422530259330042,1.28326477414318,0,0,0.216491041011214,0,0,2.39786147410026,1.55362730188303,2.82040064223167,1.04091196059682,0.913396434936424,1.38369298353635,0.150722640552623,1.41106448562846,0.376999773989026,0.247194967734374,2.74738778147832,0,0.970601099684455,0.883366073841574,0.969750506270444,0,16.1029438356351,10.4723353406728,0.255457055208591,0,0,0,11.833460512981,11.4375150704657,1.00523481690292,9.03886464999838,3.83573185995496,10.1816141834184,5.51620294430376,2.95334155165917,2.98576729464223,4.29628689337247,6.94458124425364,2.21204753036596,1.60931473103431,3.42118046630164,3.31550599238573,6.53150391852747,9.60852902136373,8.05834831213668,12.9351685369508,0.646703978798527,0.756424320671277,0.879755620819744,1.09597866213787,1.11218899690239,1.74126083261083,1.02891068203972,6.56813080501028,0,0,0,0.828503090142008,0.938104239924385,1.62055855314913,2.13070262026689,1.96764231747404,1.3884040159864,2.09280550275367,0.804820204198858,1.63471479314037,0.987359099480883,1.47750717671186,5.59374785866405,4.09359964790931,3.73235195994786,5.50246316917524,9.46304768538573,1.74937841044784,0,0.264450566663544,0.853153002140936,2.55460339046482,1.54640953586512,0.80673409849337,0.444756087689741,0.951128130562796,0,0.164698954724011,0.502670417600539,0.397912944082302,1.16978452271472,0,0,0.398282546508734,0.758671603812327,3.77020091612105,5.63538678365402,6.31319116320474,9.50367187121366,8.41629838683823,17.5797573205435,11.513591542409,11.9319033159445,9.37818445805684,0,0.166845105716094,0.589676985339609,0,0.202860121388503,0.72353147925725,0,0.575392274901621,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,1.47802552133284,1.51593129416388,0.814824882210129,1.35796068620151,1.40814148973101,1.00503754465089,2.85652369063216,0.585400943573396,0.788175720530955,1.10732344824387,1.43509291791738,1.80249646187312,0.863424909329478,0.578596234326046,0,0,0,0.827810238914197,11.559642479121,7.03270119553219,0.491804836130026,1.26235463602186,1.89304931649754,2.34263246577983,2.15423397732799,3.10659437338318,2.45078541490634,4.52922449262132,2.83367491172426,1.46127928955656,5.13874111330481,7.39039027770156,4.25820255624806,1.78065603667255,3.74640006513225,7.58862565673663,1.32745138339963,1.21390318077491,0.302323556964751,1.13163047853539,1.18120757152309,0.922305443831782,0.775284879504663,1.09060118843252,1.42598951353889,0.316036757935816,0,1.03135543248187,7.83011093233712,1.8006109403131,0.776152102696527,1.50035924522115,2.12808280370728,1.96205699362278,3.1264313914403,2.43571959291679,1.17335854031855,0.21183207086382,0.441056796109924,1.31909002353184,1.13025098687134,0.301564624640779,0.238744688006273,0.164140899745061,0.291480836629851,11.1255181206306,0,3.30218988741156,2.59272338317596,0.188368457004691,0,0,0.169978429993855,0,0.138199973804424,2.86401185404534,0.949007980743406,2.84647253977588,2.26811215725783,2.09088296014469,0.87345025498471,1.34864346384821,1.1571483801547,0.785267825952089,1.03691978633434,1.24267862617385,1.12738587736838,3.88743019714345,1.65458490457098,1.75006069509643,1.93739735216597,1.68956125490778,3.52071715937262,1.8228613878153,2.62148361064277,0,1.15212002503146,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0.680191150845634,0,0,0,2.89784391048286,2.81523713176773,2.19781949120718,1.71494703263253,1.00314420807073,4.51801474093653,6.44455331110048,8.59343270159095,4.81188910562325,3.42541259885321,3.7769694869485,2.70009000092722,4.5032120322422,9.9691329976525,8.28416498802912,0.62272408550506,1.19707462020309,0.853668028770671,1.21553358534147,0.838452650511929,0.367687016900028,2.889207461421,2.67845574410562,1.92551525755089,1.51618327058278,3.29523089857312,2.26351609663291,2.43467919421694,2.68905640100451,1.7230640686684,2.38146845641537,1.15884325944855,0.77163688185482,1.64834360321323,1.32479028120958,0.685738504770831,1.59728225543404,1.43061713968393,1.30811774969096,2.070406369137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| ||
|short_description=p4@Magi2 | |||
}} | }} |
Latest revision as of 19:43, 25 September 2015
Short description: | p4@Magi2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Magi2_5end |
Coexpression cluster: | NA |
Association with transcript: | -245bp_to_ENSMUST00000088516, NM_001170746, uc012dsm.1_5end |
EntrezGene: | Magi2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.73e-15 | 64 |
neural plate | 1.73e-15 | 64 |
presumptive neural plate | 1.73e-15 | 64 |
nervous system | 2.23e-14 | 75 |
ectoderm-derived structure | 3.96e-14 | 95 |
ectoderm | 3.96e-14 | 95 |
presumptive ectoderm | 3.96e-14 | 95 |
structure with developmental contribution from neural crest | 8.42e-14 | 92 |
central nervous system | 9.33e-14 | 73 |
regional part of nervous system | 7.40e-12 | 54 |
ecto-epithelium | 1.75e-11 | 73 |
pre-chordal neural plate | 3.78e-11 | 49 |
neural tube | 5.28e-11 | 52 |
neural rod | 5.28e-11 | 52 |
future spinal cord | 5.28e-11 | 52 |
neural keel | 5.28e-11 | 52 |
cavitated compound organ | 2.12e-09 | 21 |
brain | 3.56e-09 | 47 |
future brain | 3.56e-09 | 47 |
regional part of brain | 1.13e-08 | 46 |
anterior neural tube | 1.61e-07 | 40 |
compound organ | 3.22e-07 | 43 |
regional part of forebrain | 5.68e-07 | 39 |
forebrain | 5.68e-07 | 39 |
future forebrain | 5.68e-07 | 39 |
gray matter | 9.65e-07 | 34 |