FFCP PHASE1:Mm9::chr7:134119793..134119811,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:134119793..134119811,+ to FFCP PHASE1:Mm9::chr7:134119793..134119811,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=52858 | |EntrezGene=52858 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=240 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VDP6 | |UniProt=Q8VDP6 | ||
|association_with_transcript=-51bp_to_ENSMUST00000032920,NM_026638,uc009jtv.1,uc012fty.1,uc012ftz.1_5end | |||
|cluster_id=chr7:134119793..134119811,+ | |||
|description=CAGE_peak_6_at_Cdipt_5end | |||
|id=chr7:134119793..134119811,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.76e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.31e-15!75;UBERON:0001016!5.31e-15!75;UBERON:0001017!9.44e-15!73;UBERON:0005743!9.44e-15!73;UBERON:0001049!3.69e-13!52;UBERON:0005068!3.69e-13!52;UBERON:0006241!3.69e-13!52;UBERON:0007135!3.69e-13!52;UBERON:0002020!1.57e-12!34;UBERON:0000955!2.49e-12!50;UBERON:0006238!2.49e-12!50;UBERON:0002616!5.59e-12!49;UBERON:0002791!1.65e-10!29;UBERON:0003528!1.65e-10!29;UBERON:0001893!1.65e-10!29;UBERON:0003080!1.28e-09!40;UBERON:0002780!2.82e-09!39;UBERON:0001890!2.82e-09!39;UBERON:0006240!2.82e-09!39;UBERON:0000956!6.48e-09!21;UBERON:0001869!6.48e-09!21;UBERON:0000203!6.48e-09!21;UBERON:0002619!2.39e-08!17;UBERON:0002346!2.48e-08!71;UBERON:0003075!2.48e-08!71;UBERON:0007284!2.48e-08!71;UBERON:0002021!8.60e-08!10;UBERON:0000411!8.60e-08!10;UBERON:0001950!8.60e-08!10;UBERON:0004121!2.30e-07!102;UBERON:0000924!2.30e-07!102;UBERON:0006601!2.30e-07!102;UBERON:0000033!9.58e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.44e-14,73;UBERON:0001016,3.68e-14,75;UBERON:0000073,2.05e-13,54;UBERON:0002020,4.84e-13,34;UBERON:0001049,2.19e-12,52;UBERON:0005068,2.19e-12,52;UBERON:0006241,2.19e-12,52;UBERON:0007135,2.19e-12,52;UBERON:0000160,1.08e-10,31;UBERON:0003528,1.80e-10,29;UBERON:0002791,1.80e-10,29;UBERON:0001893,1.80e-10,29;UBERON:0000955,4.87e-10,47;UBERON:0006238,4.87e-10,47;UBERON:0002021,7.39e-10,10;UBERON:0000411,7.39e-10,10;UBERON:0001950,7.39e-10,10;UBERON:0002616,1.25e-09,46;UBERON:0000956,2.12e-09,21;UBERON:0001869,2.12e-09,21;UBERON:0000203,2.12e-09,21;UBERON:0002346,2.57e-09,64;UBERON:0003075,2.57e-09,64;UBERON:0007284,2.57e-09,64;UBERON:0002619,3.24e-09,17;UBERON:0004121,1.10e-08,95;UBERON:0000924,1.10e-08,95;UBERON:0006601,1.10e-08,95;UBERON:0003080,2.37e-08,40;UBERON:0002780,5.98e-08,39;UBERON:0001890,5.98e-08,39;UBERON:0006240,5.98e-08,39;UBERON:0000344,2.26e-07,15 | |||
|phase1_expression=0.480446541314382,8.37540978334467,11.8299802241279,9.98131897312539,7.51343594919521,2.35030980676646,3.27057696833736,0.129123323441576,0.140788722151667,0,0.171217968225505,0.239316476986009,0.342401459862411,0.34968160967599,0,0.809901069559304,0,0,0.137114433605739,0.42438965179803,1.44573593256819,0.397163804803541,1.04479915655574,7.99962113967033,10.782236210157,4.01962374880514,8.61523992318149,6.03319451520489,22.9928337542212,13.8616571367962,9.5344119581781,1.90509202037889,3.07532393792285,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0,0,2.14024590558481,1.92616169317078,1.10128051297009,3.9119567217402,1.09012578190223,1.97717564461025,1.36100929351998,1.67983705950435,4.31257693094915,0,0,0,2.57259436035947,0.286533439938757,1.03134418455488,1.82084814773638,1.5869729378161,1.90149421051854,1.0165335962074,3.55717918444456,2.2497492932035,6.92206453796882,2.1314403448383,0.299600110518405,2.30530983192933,1.03689612308478,1.62007125998029,0.841299845405528,3.99911378165325,3.09215957332259,0.734944795289724,1.34183659425531,0.919218786610021,3.30347642998166,2.80912143787413,3.22573719838111,0.791317726381163,0.823388792421687,1.04182674111352,2.51264699101243,2.8138130501584,2.29197371665215,2.35702868378934,3.84403538157578,3.35519002485541,0.908714319998209,1.28471652181535,0.289864488701678,0,0.679971333707751,0,0,0,1.68533304158102,0.852151612890289,0.779358013808606,1.06001872353102,0,1.28326477414318,0,0,2.16491041011214,1.26679932737549,2.52762222507392,2.16949371466214,0,0,0.346970653532272,0.913396434936424,1.15307748628029,0.753613202763113,0.587943535678524,0.753999547978053,8.40462890296871,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,3.35114730901528,6.64188343542338,1.07833612055328,1.19980546198682,0.508280908292259,2.69623150928681,5.94750783664214,3.76963056338593,9.73416193076748,10.4843337505436,2.90903262383384,3.89379031362618,1.12023300235348,0.373220911830279,1.26361379216837,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.204109497453984,0.640568601424249,0.562210347358373,1.03481348295606,0.646703978798527,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0.823128545631774,0.199034266818493,0,1.54408744268829,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,6.30869845692382,2.16099685996497,10.9038198384653,1.32225283331772,0.639864751605702,0.696710015581316,0.644337306610467,1.00841762311671,2.2237804384487,5.32631753115166,9.49058123089023,5.92916237006439,4.02136334080431,3.58121649674071,4.28920991662064,7.19055526923377,5.18731319699266,13.7407478545513,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.189709611372772,0.738050739898011,0,0.493588655687202,0,1.00107063429656,0.393117990226406,0.899448449539415,0.811440485554012,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.538192240565737,0,0.923765950833023,0.37898282354097,0.325929952884052,0,0.234690248288502,1.00503754465089,0.476087281772027,0.780534591431195,0.157635144106191,1.10732344824387,0.318909537314974,0.655453258862952,0.518054945597687,0.867894351489069,3.01582567878545,1.08781136763742,0,0,2.0871576698413,1.75817529888305,1.80328439914343,0.504941854408746,0,1.56175497718655,2.15423397732799,0.477937595905104,0.445597348164788,0.566153061577665,1.21443210502468,1.16902343164525,0.395287777946524,2.57057053137446,0.851640511249612,0.35613120733451,0.81443479676788,0.494910368917606,0,0,0.604647113929502,0.565815239267694,1.47650946440386,0,1.29214146584111,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,1.70219802876894,0.540183282093931,0.646793418913773,0.643011105094777,0.177340233642274,0.713475270408282,0.822745103010605,0.304464949114599,3.75474732901937,4.87213762986786,0.882113592219848,0.16488625294148,0.322928853391811,0.241251699712623,0.238744688006273,0.492422699235184,9.32738677215522,2.22510362412612,0,0.206386867963223,0.740778109478847,0.941842285023455,0.820165366326151,0.228778173206523,0.339956859987711,0.419854356970974,0.552799895217695,0.954670618015114,0.949007980743406,0,0.324016022465404,0.418176592028937,0,0.269728692769641,0.661227645802687,0.523511883968059,1.29614973291793,0,0,1.19613236835183,1.32366792365678,0.583353565032143,0.387479470433193,0.844780627453891,0.938857909166032,1.0416350787516,1.04859344425711,1.20792060413003,1.15212002503146,0,0.608175645870493,0.205421914329655,0.389762468933385,0.895133478337407,0.198681354781265,0,0.590758108698309,0.201932899896295,0.533447646584999,0.604957110821043,0.292373642219257,0.192423683280659,0.233753804363138,0,4.88369097422942,3.76798197759798,7.05115388729129,0.772758376128762,1.12609485270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| |phase1_expression=0.480446541314382,8.37540978334467,11.8299802241279,9.98131897312539,7.51343594919521,2.35030980676646,3.27057696833736,0.129123323441576,0.140788722151667,0,0.171217968225505,0.239316476986009,0.342401459862411,0.34968160967599,0,0.809901069559304,0,0,0.137114433605739,0.42438965179803,1.44573593256819,0.397163804803541,1.04479915655574,7.99962113967033,10.782236210157,4.01962374880514,8.61523992318149,6.03319451520489,22.9928337542212,13.8616571367962,9.5344119581781,1.90509202037889,3.07532393792285,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0,0,2.14024590558481,1.92616169317078,1.10128051297009,3.9119567217402,1.09012578190223,1.97717564461025,1.36100929351998,1.67983705950435,4.31257693094915,0,0,0,2.57259436035947,0.286533439938757,1.03134418455488,1.82084814773638,1.5869729378161,1.90149421051854,1.0165335962074,3.55717918444456,2.2497492932035,6.92206453796882,2.1314403448383,0.299600110518405,2.30530983192933,1.03689612308478,1.62007125998029,0.841299845405528,3.99911378165325,3.09215957332259,0.734944795289724,1.34183659425531,0.919218786610021,3.30347642998166,2.80912143787413,3.22573719838111,0.791317726381163,0.823388792421687,1.04182674111352,2.51264699101243,2.8138130501584,2.29197371665215,2.35702868378934,3.84403538157578,3.35519002485541,0.908714319998209,1.28471652181535,0.289864488701678,0,0.679971333707751,0,0,0,1.68533304158102,0.852151612890289,0.779358013808606,1.06001872353102,0,1.28326477414318,0,0,2.16491041011214,1.26679932737549,2.52762222507392,2.16949371466214,0,0,0.346970653532272,0.913396434936424,1.15307748628029,0.753613202763113,0.587943535678524,0.753999547978053,8.40462890296871,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,3.35114730901528,6.64188343542338,1.07833612055328,1.19980546198682,0.508280908292259,2.69623150928681,5.94750783664214,3.76963056338593,9.73416193076748,10.4843337505436,2.90903262383384,3.89379031362618,1.12023300235348,0.373220911830279,1.26361379216837,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.204109497453984,0.640568601424249,0.562210347358373,1.03481348295606,0.646703978798527,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0.823128545631774,0.199034266818493,0,1.54408744268829,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,6.30869845692382,2.16099685996497,10.9038198384653,1.32225283331772,0.639864751605702,0.696710015581316,0.644337306610467,1.00841762311671,2.2237804384487,5.32631753115166,9.49058123089023,5.92916237006439,4.02136334080431,3.58121649674071,4.28920991662064,7.19055526923377,5.18731319699266,13.7407478545513,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.189709611372772,0.738050739898011,0,0.493588655687202,0,1.00107063429656,0.393117990226406,0.899448449539415,0.811440485554012,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.538192240565737,0,0.923765950833023,0.37898282354097,0.325929952884052,0,0.234690248288502,1.00503754465089,0.476087281772027,0.780534591431195,0.157635144106191,1.10732344824387,0.318909537314974,0.655453258862952,0.518054945597687,0.867894351489069,3.01582567878545,1.08781136763742,0,0,2.0871576698413,1.75817529888305,1.80328439914343,0.504941854408746,0,1.56175497718655,2.15423397732799,0.477937595905104,0.445597348164788,0.566153061577665,1.21443210502468,1.16902343164525,0.395287777946524,2.57057053137446,0.851640511249612,0.35613120733451,0.81443479676788,0.494910368917606,0,0,0.604647113929502,0.565815239267694,1.47650946440386,0,1.29214146584111,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,1.70219802876894,0.540183282093931,0.646793418913773,0.643011105094777,0.177340233642274,0.713475270408282,0.822745103010605,0.304464949114599,3.75474732901937,4.87213762986786,0.882113592219848,0.16488625294148,0.322928853391811,0.241251699712623,0.238744688006273,0.492422699235184,9.32738677215522,2.22510362412612,0,0.206386867963223,0.740778109478847,0.941842285023455,0.820165366326151,0.228778173206523,0.339956859987711,0.419854356970974,0.552799895217695,0.954670618015114,0.949007980743406,0,0.324016022465404,0.418176592028937,0,0.269728692769641,0.661227645802687,0.523511883968059,1.29614973291793,0,0,1.19613236835183,1.32366792365678,0.583353565032143,0.387479470433193,0.844780627453891,0.938857909166032,1.0416350787516,1.04859344425711,1.20792060413003,1.15212002503146,0,0.608175645870493,0.205421914329655,0.389762468933385,0.895133478337407,0.198681354781265,0,0.590758108698309,0.201932899896295,0.533447646584999,0.604957110821043,0.292373642219257,0.192423683280659,0.233753804363138,0,4.88369097422942,3.76798197759798,7.05115388729129,0.772758376128762,1.12609485270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| ||
|short_description=p6@Cdipt | |||
}} | }} |
Latest revision as of 21:57, 25 September 2015
Short description: | p6@Cdipt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cdipt_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | -51bp_to_ENSMUST00000032920, NM_026638, uc009jtv.1, uc012fty.1, uc012ftz.1_5end |
EntrezGene: | Cdipt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.76e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.44e-14 | 73 |
nervous system | 3.68e-14 | 75 |
regional part of nervous system | 2.05e-13 | 54 |
gray matter | 4.84e-13 | 34 |
neural tube | 2.19e-12 | 52 |
neural rod | 2.19e-12 | 52 |
future spinal cord | 2.19e-12 | 52 |
neural keel | 2.19e-12 | 52 |
intestine | 1.08e-10 | 31 |
brain grey matter | 1.80e-10 | 29 |
regional part of telencephalon | 1.80e-10 | 29 |
telencephalon | 1.80e-10 | 29 |
brain | 4.87e-10 | 47 |
future brain | 4.87e-10 | 47 |
occipital lobe | 7.39e-10 | 10 |
visual cortex | 7.39e-10 | 10 |
neocortex | 7.39e-10 | 10 |
regional part of brain | 1.25e-09 | 46 |
cerebral cortex | 2.12e-09 | 21 |
cerebral hemisphere | 2.12e-09 | 21 |
pallium | 2.12e-09 | 21 |
neurectoderm | 2.57e-09 | 64 |
neural plate | 2.57e-09 | 64 |
presumptive neural plate | 2.57e-09 | 64 |
regional part of cerebral cortex | 3.24e-09 | 17 |
ectoderm-derived structure | 1.10e-08 | 95 |
ectoderm | 1.10e-08 | 95 |
presumptive ectoderm | 1.10e-08 | 95 |
anterior neural tube | 2.37e-08 | 40 |
regional part of forebrain | 5.98e-08 | 39 |
forebrain | 5.98e-08 | 39 |
future forebrain | 5.98e-08 | 39 |
mucosa | 2.26e-07 | 15 |