FFCP PHASE1:Mm9::chr10:39451780..39451817,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=327744 | |EntrezGene=327744 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000129191,ENSMUST00000133302,ENSMUST00000145971,ENSMUST00000149830,ENSMUST00000151921,ENSMUST00000155482,NR_038037_5end | |association_with_transcript=0bp_to_ENSMUST00000129191,ENSMUST00000133302,ENSMUST00000145971,ENSMUST00000149830,ENSMUST00000151921,ENSMUST00000155482,NR_038037_5end | ||
|cluster_id=chr10:39451780..39451817,- | |||
|description=CAGE_peak_1_at_E130307A14Rik_5end | |description=CAGE_peak_1_at_E130307A14Rik_5end | ||
|id=chr10:39451780..39451817,- | |id=chr10:39451780..39451817,- | ||
|ontology_enrichment_celltype=CL:0000117!1.41e-14!23;CL:0000337!1.41e-14!23;CL:0000540!5.03e-13!33;CL:0000047!5.03e-13!33;CL:0000031!5.03e-13!33;CL:0000404!5.03e-13!33;CL:0000393!2.35e-10!39;CL:0000211!2.35e-10!39;CL:0002319!2.98e-09!43;CL:0000221!3.08e-09!44;CL:0000133!3.08e-09!44;CL:0000055!3.19e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.41e-14!23;CL:0000337!1.41e-14!23;CL:0000540!5.03e-13!33;CL:0000047!5.03e-13!33;CL:0000031!5.03e-13!33;CL:0000404!5.03e-13!33;CL:0000393!2.35e-10!39;CL:0000211!2.35e-10!39;CL:0002319!2.98e-09!43;CL:0000221!3.08e-09!44;CL:0000133!3.08e-09!44;CL:0000055!3.19e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-14,23;CL:0000337,1.35e-14,23;CL:0000540,4.84e-13,33;CL:0000047,4.84e-13,33;CL:0000031,4.84e-13,33;CL:0000404,4.84e-13,33;CL:0000393,2.34e-10,39;CL:0000211,2.34e-10,39;CL:0002319,2.91e-09,43;CL:0000221,3.00e-09,44;CL:0000133,3.00e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.97e-21!73;UBERON:0005743!1.97e-21!73;UBERON:0000073!3.49e-20!75;UBERON:0001016!3.49e-20!75;UBERON:0001049!3.11e-18!52;UBERON:0005068!3.11e-18!52;UBERON:0006241!3.11e-18!52;UBERON:0007135!3.11e-18!52;UBERON:0000955!5.62e-17!50;UBERON:0006238!5.62e-17!50;UBERON:0002616!2.77e-16!49;UBERON:0002020!3.89e-16!34;UBERON:0004121!9.79e-16!102;UBERON:0000924!9.79e-16!102;UBERON:0006601!9.79e-16!102;UBERON:0002346!2.30e-15!71;UBERON:0003075!2.30e-15!71;UBERON:0007284!2.30e-15!71;UBERON:0000033!3.38e-15!63;UBERON:0007811!1.80e-14!86;UBERON:0003080!2.15e-14!40;UBERON:0002780!8.75e-14!39;UBERON:0001890!8.75e-14!39;UBERON:0006240!8.75e-14!39;UBERON:0003056!1.47e-13!49;UBERON:0000153!3.96e-13!94;UBERON:0002791!4.35e-13!29;UBERON:0003528!4.35e-13!29;UBERON:0001893!4.35e-13!29;UBERON:0000956!1.29e-08!21;UBERON:0001869!1.29e-08!21;UBERON:0000203!1.29e-08!21 | |ontology_enrichment_uberon=UBERON:0001017!1.97e-21!73;UBERON:0005743!1.97e-21!73;UBERON:0000073!3.49e-20!75;UBERON:0001016!3.49e-20!75;UBERON:0001049!3.11e-18!52;UBERON:0005068!3.11e-18!52;UBERON:0006241!3.11e-18!52;UBERON:0007135!3.11e-18!52;UBERON:0000955!5.62e-17!50;UBERON:0006238!5.62e-17!50;UBERON:0002616!2.77e-16!49;UBERON:0002020!3.89e-16!34;UBERON:0004121!9.79e-16!102;UBERON:0000924!9.79e-16!102;UBERON:0006601!9.79e-16!102;UBERON:0002346!2.30e-15!71;UBERON:0003075!2.30e-15!71;UBERON:0007284!2.30e-15!71;UBERON:0000033!3.38e-15!63;UBERON:0007811!1.80e-14!86;UBERON:0003080!2.15e-14!40;UBERON:0002780!8.75e-14!39;UBERON:0001890!8.75e-14!39;UBERON:0006240!8.75e-14!39;UBERON:0003056!1.47e-13!49;UBERON:0000153!3.96e-13!94;UBERON:0002791!4.35e-13!29;UBERON:0003528!4.35e-13!29;UBERON:0001893!4.35e-13!29;UBERON:0000956!1.29e-08!21;UBERON:0001869!1.29e-08!21;UBERON:0000203!1.29e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.85e-21,73;UBERON:0001016,3.29e-20,75;UBERON:0000073,2.15e-19,54;UBERON:0001049,2.95e-18,52;UBERON:0005068,2.95e-18,52;UBERON:0006241,2.95e-18,52;UBERON:0007135,2.95e-18,52;UBERON:0002346,3.23e-18,64;UBERON:0003075,3.23e-18,64;UBERON:0007284,3.23e-18,64;UBERON:0004121,8.24e-18,95;UBERON:0000924,8.24e-18,95;UBERON:0006601,8.24e-18,95;UBERON:0010371,1.75e-16,73;UBERON:0002020,3.72e-16,34;UBERON:0000955,1.83e-15,47;UBERON:0006238,1.83e-15,47;UBERON:0002616,8.69e-15,46;UBERON:0003080,2.06e-14,40;UBERON:0002780,8.41e-14,39;UBERON:0001890,8.41e-14,39;UBERON:0006240,8.41e-14,39;UBERON:0003056,1.41e-13,49;UBERON:0003528,4.20e-13,29;UBERON:0002791,4.20e-13,29;UBERON:0001893,4.20e-13,29;UBERON:0010314,1.81e-11,92;UBERON:0000956,1.26e-08,21;UBERON:0001869,1.26e-08,21;UBERON:0000203,1.26e-08,21 | |||
|phase1_expression=2.88267924788629,0.348975407639361,0.454999239389536,1.20985684522732,0,1.00727563147134,1.16806320297763,4.9066862907799,1.68946466582,1.40438715793196,1.71217968225505,2.23362045186942,6.84802919724823,5.33264454755884,1.66554880907831,2.83465374345756,4.19737126876888,5.36285681109004,9.1866670515845,5.51706547337439,5.01755411891312,2.08510997521859,0.522399578277871,0.47997726838022,0.22940928106717,0.57423196411502,0,0.861884930743556,1.14014051673824,0.252030129759931,0.886922042621219,0.635030673459631,1.84519436275371,0,2.02196133825892,1.16364251750945,2.24586291888606,7.95210098400125,5.4693474116666,6.28228492768558,5.88231488031014,9.56263678941824,6.311634589405,3.52511090331616,2.53442328048786,3.67093504323363,2.34717403304412,2.8343270329458,1.97717564461025,2.3331587888914,1.67983705950435,5.75010257459886,6.37573903019398,6.5282592781021,4.36921938885203,1.28629718017973,2.86533439938757,0.515672092277442,9.1042407386819,11.1088105647127,12.0427966666174,1.69422266034566,0,2.2497492932035,1.97773272513395,1.4209602298922,2.69640099466564,3.07374644257244,6.84351441235953,8.50537411489651,7.15104868594699,11.1403883917483,7.95126747425809,9.67677313798137,8.53024692062304,11.9498442259303,5.50579404996943,8.2996769755372,9.98442466165583,9.75958529203434,8.96578907303615,10.4182674111352,8.09630697104005,7.31591393041184,9.77908785771585,9.1334861496837,9.96601765593721,8.38797506213853,1.51452386666368,2.04043212288321,2.31891590961342,1.72084775396277,0,0,0,0,1.12355536105401,2.21559419351475,1.55871602761721,1.41335829804136,3.52108549441701,1.28326477414318,2.54805239706646,0,0.649473123033642,1.26679932737549,1.01104889002957,1.82694207550496,6.21450920753212,1.92974780784272,1.38788261412909,1.82679286987285,2.07553947530453,2.86373017049983,2.4693628498498,3.39299796590124,2.47194967734374,1.59059292611903,4.42305275974937,2.26473589926373,2.20841518460394,3.39412677194655,1.86391761218122,4.39171195517321,4.60782754989601,2.04365644166873,1.67741174308288,2.39961092397363,1.65191295194984,9.58660092190865,5.94750783664214,13.0680526197379,7.47444576826789,6.39288643325826,6.64921742590592,7.62533936418461,4.27725328171328,2.61254638281195,4.29628689337247,2.31486041475121,2.73252930221678,2.29902104433473,1.80062129805349,3.0140963567143,5.57899293040888,4.61209393025459,6.65282244374075,5.69147415625834,1.72454394346274,2.45837904218165,3.69497360744293,2.41115305670332,2.50242524303038,3.1342694986995,0.823128545631774,4.77682240364384,1.40442637462647,0.772043721344145,1.70498099637356,3.93538967817454,2.81431271977315,3.78130329068131,2.60419209143731,4.52557733019029,2.31400669331067,3.25547522650571,3.21928081679543,3.73649095574942,3.12663714835613,1.64167464079095,1.70244500046297,2.77779976108131,1.3173006917463,3.22095405024892,6.9395683026162,7.20332286654991,0.330418782983798,1.05780226665418,3.19932375802851,2.55460339046482,2.70621668776396,1.00841762311671,0.889512175379481,1.71203063501303,1.42358718463353,1.97638745668813,4.02136334080431,1.98956472041151,3.50935356814416,0,1.08069024937347,0.995706366271836,2.65535061334314,3.77020091612105,3.38123207019241,2.44381593414377,3.87904974335251,3.57692681440625,2.90888070771584,2.36176236767363,1.56998727841375,1.35736880313981,0.296452627087149,1.66845105716094,1.76903095601883,1.34917267430912,1.01430060694251,1.68824011826692,1.01850340712568,1.43848068725405,2.43202840162553,0.823684239564244,2.87536413054709,0.372140947668503,0.936113019343682,0.505157755894224,1.25578189465339,0.482443521363367,5.72734889516475,3.22135400009824,2.11854469374634,4.07388205860452,4.45911471748154,4.02015017860358,4.76087281772027,5.07347484430277,3.78324345854858,3.98636441367795,5.26200736569707,4.42430949732493,3.7990696010497,4.33947175744535,7.53956419696361,3.26343410291226,2.45882136509518,0.827810238914197,6.26147300952389,6.21221938938677,1.96721934452011,1.51482556322624,4.41711507182759,4.29482618726302,5.60100834105277,1.43381278771531,3.34198011123591,3.67999490025482,3.23848561339915,4.38383786866968,4.34816555741176,13.4954952897159,1.70328102249922,3.20518086601059,4.56083486190013,2.96946221350564,1.32745138339963,3.15614827001476,1.51161778482376,1.50884063804718,1.18120757152309,0.922305443831782,1.03371317267288,1.81766864738753,1.42598951353889,1.8962205476149,1.05418608574999,0,5.7874732978144,3.42116078659489,2.06973894052407,2.7863814554107,6.38424841112185,4.99432689285798,4.60737257685939,3.04464949114599,0.469343416127421,1.69465656691056,0.882113592219848,2.80306630000516,3.87514624070173,3.5584625707612,2.626191568069,4.59594519286172,1.1659233465194,6.30446026835733,3.2465467351592,3.714963623338,3.51869602002452,2.82552685507037,4.37421528707281,2.74533807847827,2.37969801991397,1.81936888020755,2.21119958087078,0.954670618015114,3.00519193902079,2.84647253977588,3.13215488383224,3.13632444021703,2.18362563746178,2.96701562046606,2.97552440611209,0.785267825952089,1.8146096260851,2.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| |phase1_expression=2.88267924788629,0.348975407639361,0.454999239389536,1.20985684522732,0,1.00727563147134,1.16806320297763,4.9066862907799,1.68946466582,1.40438715793196,1.71217968225505,2.23362045186942,6.84802919724823,5.33264454755884,1.66554880907831,2.83465374345756,4.19737126876888,5.36285681109004,9.1866670515845,5.51706547337439,5.01755411891312,2.08510997521859,0.522399578277871,0.47997726838022,0.22940928106717,0.57423196411502,0,0.861884930743556,1.14014051673824,0.252030129759931,0.886922042621219,0.635030673459631,1.84519436275371,0,2.02196133825892,1.16364251750945,2.24586291888606,7.95210098400125,5.4693474116666,6.28228492768558,5.88231488031014,9.56263678941824,6.311634589405,3.52511090331616,2.53442328048786,3.67093504323363,2.34717403304412,2.8343270329458,1.97717564461025,2.3331587888914,1.67983705950435,5.75010257459886,6.37573903019398,6.5282592781021,4.36921938885203,1.28629718017973,2.86533439938757,0.515672092277442,9.1042407386819,11.1088105647127,12.0427966666174,1.69422266034566,0,2.2497492932035,1.97773272513395,1.4209602298922,2.69640099466564,3.07374644257244,6.84351441235953,8.50537411489651,7.15104868594699,11.1403883917483,7.95126747425809,9.67677313798137,8.53024692062304,11.9498442259303,5.50579404996943,8.2996769755372,9.98442466165583,9.75958529203434,8.96578907303615,10.4182674111352,8.09630697104005,7.31591393041184,9.77908785771585,9.1334861496837,9.96601765593721,8.38797506213853,1.51452386666368,2.04043212288321,2.31891590961342,1.72084775396277,0,0,0,0,1.12355536105401,2.21559419351475,1.55871602761721,1.41335829804136,3.52108549441701,1.28326477414318,2.54805239706646,0,0.649473123033642,1.26679932737549,1.01104889002957,1.82694207550496,6.21450920753212,1.92974780784272,1.38788261412909,1.82679286987285,2.07553947530453,2.86373017049983,2.4693628498498,3.39299796590124,2.47194967734374,1.59059292611903,4.42305275974937,2.26473589926373,2.20841518460394,3.39412677194655,1.86391761218122,4.39171195517321,4.60782754989601,2.04365644166873,1.67741174308288,2.39961092397363,1.65191295194984,9.58660092190865,5.94750783664214,13.0680526197379,7.47444576826789,6.39288643325826,6.64921742590592,7.62533936418461,4.27725328171328,2.61254638281195,4.29628689337247,2.31486041475121,2.73252930221678,2.29902104433473,1.80062129805349,3.0140963567143,5.57899293040888,4.61209393025459,6.65282244374075,5.69147415625834,1.72454394346274,2.45837904218165,3.69497360744293,2.41115305670332,2.50242524303038,3.1342694986995,0.823128545631774,4.77682240364384,1.40442637462647,0.772043721344145,1.70498099637356,3.93538967817454,2.81431271977315,3.78130329068131,2.60419209143731,4.52557733019029,2.31400669331067,3.25547522650571,3.21928081679543,3.73649095574942,3.12663714835613,1.64167464079095,1.70244500046297,2.77779976108131,1.3173006917463,3.22095405024892,6.9395683026162,7.20332286654991,0.330418782983798,1.05780226665418,3.19932375802851,2.55460339046482,2.70621668776396,1.00841762311671,0.889512175379481,1.71203063501303,1.42358718463353,1.97638745668813,4.02136334080431,1.98956472041151,3.50935356814416,0,1.08069024937347,0.995706366271836,2.65535061334314,3.77020091612105,3.38123207019241,2.44381593414377,3.87904974335251,3.57692681440625,2.90888070771584,2.36176236767363,1.56998727841375,1.35736880313981,0.296452627087149,1.66845105716094,1.76903095601883,1.34917267430912,1.01430060694251,1.68824011826692,1.01850340712568,1.43848068725405,2.43202840162553,0.823684239564244,2.87536413054709,0.372140947668503,0.936113019343682,0.505157755894224,1.25578189465339,0.482443521363367,5.72734889516475,3.22135400009824,2.11854469374634,4.07388205860452,4.45911471748154,4.02015017860358,4.76087281772027,5.07347484430277,3.78324345854858,3.98636441367795,5.26200736569707,4.42430949732493,3.7990696010497,4.33947175744535,7.53956419696361,3.26343410291226,2.45882136509518,0.827810238914197,6.26147300952389,6.21221938938677,1.96721934452011,1.51482556322624,4.41711507182759,4.29482618726302,5.60100834105277,1.43381278771531,3.34198011123591,3.67999490025482,3.23848561339915,4.38383786866968,4.34816555741176,13.4954952897159,1.70328102249922,3.20518086601059,4.56083486190013,2.96946221350564,1.32745138339963,3.15614827001476,1.51161778482376,1.50884063804718,1.18120757152309,0.922305443831782,1.03371317267288,1.81766864738753,1.42598951353889,1.8962205476149,1.05418608574999,0,5.7874732978144,3.42116078659489,2.06973894052407,2.7863814554107,6.38424841112185,4.99432689285798,4.60737257685939,3.04464949114599,0.469343416127421,1.69465656691056,0.882113592219848,2.80306630000516,3.87514624070173,3.5584625707612,2.626191568069,4.59594519286172,1.1659233465194,6.30446026835733,3.2465467351592,3.714963623338,3.51869602002452,2.82552685507037,4.37421528707281,2.74533807847827,2.37969801991397,1.81936888020755,2.21119958087078,0.954670618015114,3.00519193902079,2.84647253977588,3.13215488383224,3.13632444021703,2.18362563746178,2.96701562046606,2.97552440611209,0.785267825952089,1.8146096260851,2.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| ||
|short_description=p1@E130307A14Rik | |short_description=p1@E130307A14Rik | ||
}} | }} |
Latest revision as of 23:50, 25 September 2015
Short description: | p1@E130307A14Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_E130307A14Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000129191, ENSMUST00000133302, ENSMUST00000145971, ENSMUST00000149830, ENSMUST00000151921, ENSMUST00000155482, NR_038037_5end |
EntrezGene: | E130307A14Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.35e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.35e-14 | 23 |
neuron | 4.84e-13 | 33 |
neuronal stem cell | 4.84e-13 | 33 |
neuroblast | 4.84e-13 | 33 |
electrically signaling cell | 4.84e-13 | 33 |
electrically responsive cell | 2.34e-10 | 39 |
electrically active cell | 2.34e-10 | 39 |
neural cell | 2.91e-09 | 43 |
ectodermal cell | 3.00e-09 | 44 |
neurectodermal cell | 3.00e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.85e-21 | 73 |
nervous system | 3.29e-20 | 75 |
regional part of nervous system | 2.15e-19 | 54 |
neural tube | 2.95e-18 | 52 |
neural rod | 2.95e-18 | 52 |
future spinal cord | 2.95e-18 | 52 |
neural keel | 2.95e-18 | 52 |
neurectoderm | 3.23e-18 | 64 |
neural plate | 3.23e-18 | 64 |
presumptive neural plate | 3.23e-18 | 64 |
ectoderm-derived structure | 8.24e-18 | 95 |
ectoderm | 8.24e-18 | 95 |
presumptive ectoderm | 8.24e-18 | 95 |
ecto-epithelium | 1.75e-16 | 73 |
gray matter | 3.72e-16 | 34 |
brain | 1.83e-15 | 47 |
future brain | 1.83e-15 | 47 |
regional part of brain | 8.69e-15 | 46 |
anterior neural tube | 2.06e-14 | 40 |
regional part of forebrain | 8.41e-14 | 39 |
forebrain | 8.41e-14 | 39 |
future forebrain | 8.41e-14 | 39 |
pre-chordal neural plate | 1.41e-13 | 49 |
brain grey matter | 4.20e-13 | 29 |
regional part of telencephalon | 4.20e-13 | 29 |
telencephalon | 4.20e-13 | 29 |
structure with developmental contribution from neural crest | 1.81e-11 | 92 |
cerebral cortex | 1.26e-08 | 21 |
cerebral hemisphere | 1.26e-08 | 21 |
pallium | 1.26e-08 | 21 |