FFCP PHASE1:Mm9::chr11:94871611..94871679,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:94871611..94871679,+
|short_description=p3@Samd14
|description=CAGE_peak_3_at_Samd14_5end
|association_with_transcript=16bp_to_ENSMUST00000124735_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217125 | |EntrezGene=217125 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1312 | |||
|TSSclassifier=NA | |||
|UniProt=B7ZC59 | |UniProt=B7ZC59 | ||
|association_with_transcript=16bp_to_ENSMUST00000124735_5end | |||
|cluster_id=chr11:94871611..94871679,+ | |||
|description=CAGE_peak_3_at_Samd14_5end | |||
|id=chr11:94871611..94871679,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.28e-14!23;CL:0000337!1.28e-14!23;CL:0000540!2.82e-12!33;CL:0000047!2.82e-12!33;CL:0000031!2.82e-12!33;CL:0000404!2.82e-12!33;CL:0000221!8.41e-10!44;CL:0000133!8.41e-10!44;CL:0002319!8.78e-10!43;CL:0000393!1.50e-09!39;CL:0000211!1.50e-09!39;CL:0000055!2.76e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.28e-15,23;CL:0000337,4.28e-15,23;CL:0000540,1.14e-12,33;CL:0000047,1.14e-12,33;CL:0000031,1.14e-12,33;CL:0000404,1.14e-12,33;CL:0000221,5.68e-10,44;CL:0000133,5.68e-10,44;CL:0002319,5.95e-10,43;CL:0000393,7.37e-10,39;CL:0000211,7.37e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.52e-23!73;UBERON:0005743!4.52e-23!73;UBERON:0002346!1.21e-22!71;UBERON:0003075!1.21e-22!71;UBERON:0007284!1.21e-22!71;UBERON:0000073!4.33e-22!75;UBERON:0001016!4.33e-22!75;UBERON:0001049!2.05e-21!52;UBERON:0005068!2.05e-21!52;UBERON:0006241!2.05e-21!52;UBERON:0007135!2.05e-21!52;UBERON:0000033!1.79e-20!63;UBERON:0000955!2.11e-19!50;UBERON:0006238!2.11e-19!50;UBERON:0004121!3.72e-19!102;UBERON:0000924!3.72e-19!102;UBERON:0006601!3.72e-19!102;UBERON:0002616!3.77e-19!49;UBERON:0003056!4.77e-18!49;UBERON:0003080!1.29e-15!40;UBERON:0002020!1.58e-15!34;UBERON:0002780!5.58e-15!39;UBERON:0001890!5.58e-15!39;UBERON:0006240!5.58e-15!39;UBERON:0002791!2.31e-12!29;UBERON:0003528!2.31e-12!29;UBERON:0001893!2.31e-12!29;UBERON:0007811!2.89e-09!86;UBERON:0000153!2.94e-09!94;UBERON:0000956!2.95e-08!21;UBERON:0001869!2.95e-08!21;UBERON:0000203!2.95e-08!21;UBERON:0000468!9.87e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.46e-24,64;UBERON:0003075,1.46e-24,64;UBERON:0007284,1.46e-24,64;UBERON:0001017,1.09e-23,73;UBERON:0000073,2.72e-23,54;UBERON:0001016,1.12e-22,75;UBERON:0001049,3.85e-22,52;UBERON:0005068,3.85e-22,52;UBERON:0006241,3.85e-22,52;UBERON:0007135,3.85e-22,52;UBERON:0010371,1.56e-19,73;UBERON:0004121,3.94e-19,95;UBERON:0000924,3.94e-19,95;UBERON:0006601,3.94e-19,95;UBERON:0003056,1.19e-18,49;UBERON:0000955,1.76e-18,47;UBERON:0006238,1.76e-18,47;UBERON:0002616,3.17e-18,46;UBERON:0003080,3.95e-16,40;UBERON:0002020,4.89e-16,34;UBERON:0002780,1.81e-15,39;UBERON:0001890,1.81e-15,39;UBERON:0006240,1.81e-15,39;UBERON:0010314,1.26e-13,92;UBERON:0003528,9.31e-13,29;UBERON:0002791,9.31e-13,29;UBERON:0001893,9.31e-13,29;UBERON:0000956,1.68e-08,21;UBERON:0001869,1.68e-08,21;UBERON:0000203,1.68e-08,21 | |||
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| ||
|short_description=p3@Samd14 | |||
}} | }} |
Latest revision as of 00:33, 26 September 2015
Short description: | p3@Samd14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Samd14_5end |
Coexpression cluster: | MCL_coexpression_mm9:1312 |
Association with transcript: | 16bp_to_ENSMUST00000124735_5end |
EntrezGene: | Samd14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.28e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.28e-15 | 23 |
neuron | 1.14e-12 | 33 |
neuronal stem cell | 1.14e-12 | 33 |
neuroblast | 1.14e-12 | 33 |
electrically signaling cell | 1.14e-12 | 33 |
ectodermal cell | 5.68e-10 | 44 |
neurectodermal cell | 5.68e-10 | 44 |
neural cell | 5.95e-10 | 43 |
electrically responsive cell | 7.37e-10 | 39 |
electrically active cell | 7.37e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.46e-24 | 64 |
neural plate | 1.46e-24 | 64 |
presumptive neural plate | 1.46e-24 | 64 |
central nervous system | 1.09e-23 | 73 |
regional part of nervous system | 2.72e-23 | 54 |
nervous system | 1.12e-22 | 75 |
neural tube | 3.85e-22 | 52 |
neural rod | 3.85e-22 | 52 |
future spinal cord | 3.85e-22 | 52 |
neural keel | 3.85e-22 | 52 |
ecto-epithelium | 1.56e-19 | 73 |
ectoderm-derived structure | 3.94e-19 | 95 |
ectoderm | 3.94e-19 | 95 |
presumptive ectoderm | 3.94e-19 | 95 |
pre-chordal neural plate | 1.19e-18 | 49 |
brain | 1.76e-18 | 47 |
future brain | 1.76e-18 | 47 |
regional part of brain | 3.17e-18 | 46 |
anterior neural tube | 3.95e-16 | 40 |
gray matter | 4.89e-16 | 34 |
regional part of forebrain | 1.81e-15 | 39 |
forebrain | 1.81e-15 | 39 |
future forebrain | 1.81e-15 | 39 |
structure with developmental contribution from neural crest | 1.26e-13 | 92 |
brain grey matter | 9.31e-13 | 29 |
regional part of telencephalon | 9.31e-13 | 29 |
telencephalon | 9.31e-13 | 29 |
cerebral cortex | 1.68e-08 | 21 |
cerebral hemisphere | 1.68e-08 | 21 |
pallium | 1.68e-08 | 21 |