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FFCP PHASE1:Mm9::chr4:102787317..102787364,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71148
|EntrezGene=71148
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=B1AY30
|UniProt=B1AY30
|association_with_transcript=-2bp_to_ENSMUST00000143417_5end
|association_with_transcript=-2bp_to_ENSMUST00000143417_5end
|cluster_id=chr4:102787317..102787364,+
|description=CAGE_peak_3_at_Mier1_5end
|description=CAGE_peak_3_at_Mier1_5end
|id=chr4:102787317..102787364,+
|id=chr4:102787317..102787364,+
|ontology_enrichment_celltype=CL:0000117!3.07e-09!23;CL:0000337!3.07e-09!23;CL:0000540!5.66e-08!33;CL:0000047!5.66e-08!33;CL:0000031!5.66e-08!33;CL:0000404!5.66e-08!33
|ontology_enrichment_celltype=CL:0000117!3.07e-09!23;CL:0000337!3.07e-09!23;CL:0000540!5.66e-08!33;CL:0000047!5.66e-08!33;CL:0000031!5.66e-08!33;CL:0000404!5.66e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.06e-09,23;CL:0000337,3.06e-09,23;CL:0000540,5.64e-08,33;CL:0000047,5.64e-08,33;CL:0000031,5.64e-08,33;CL:0000404,5.64e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!2.67e-16!94;UBERON:0007811!1.83e-14!86;UBERON:0000033!6.36e-12!63;UBERON:0002346!1.07e-10!71;UBERON:0003075!1.07e-10!71;UBERON:0007284!1.07e-10!71;UBERON:0000955!2.64e-10!50;UBERON:0006238!2.64e-10!50;UBERON:0001049!3.08e-10!52;UBERON:0005068!3.08e-10!52;UBERON:0006241!3.08e-10!52;UBERON:0007135!3.08e-10!52;UBERON:0004121!3.82e-10!102;UBERON:0000924!3.82e-10!102;UBERON:0006601!3.82e-10!102;UBERON:0003056!5.22e-10!49;UBERON:0002616!6.56e-10!49;UBERON:0001017!7.75e-10!73;UBERON:0005743!7.75e-10!73;UBERON:0000073!4.13e-09!75;UBERON:0001016!4.13e-09!75;UBERON:0002020!4.90e-09!34;UBERON:0003080!1.33e-08!40;UBERON:0002780!1.45e-08!39;UBERON:0001890!1.45e-08!39;UBERON:0006240!1.45e-08!39;UBERON:0002791!9.82e-08!29;UBERON:0003528!9.82e-08!29;UBERON:0001893!9.82e-08!29;UBERON:0000468!3.87e-07!333
|ontology_enrichment_uberon=UBERON:0000153!2.67e-16!94;UBERON:0007811!1.83e-14!86;UBERON:0000033!6.36e-12!63;UBERON:0002346!1.07e-10!71;UBERON:0003075!1.07e-10!71;UBERON:0007284!1.07e-10!71;UBERON:0000955!2.64e-10!50;UBERON:0006238!2.64e-10!50;UBERON:0001049!3.08e-10!52;UBERON:0005068!3.08e-10!52;UBERON:0006241!3.08e-10!52;UBERON:0007135!3.08e-10!52;UBERON:0004121!3.82e-10!102;UBERON:0000924!3.82e-10!102;UBERON:0006601!3.82e-10!102;UBERON:0003056!5.22e-10!49;UBERON:0002616!6.56e-10!49;UBERON:0001017!7.75e-10!73;UBERON:0005743!7.75e-10!73;UBERON:0000073!4.13e-09!75;UBERON:0001016!4.13e-09!75;UBERON:0002020!4.90e-09!34;UBERON:0003080!1.33e-08!40;UBERON:0002780!1.45e-08!39;UBERON:0001890!1.45e-08!39;UBERON:0006240!1.45e-08!39;UBERON:0002791!9.82e-08!29;UBERON:0003528!9.82e-08!29;UBERON:0001893!9.82e-08!29;UBERON:0000468!3.87e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.95e-11,54;UBERON:0010371,3.10e-11,73;UBERON:0002346,4.45e-11,64;UBERON:0003075,4.45e-11,64;UBERON:0007284,4.45e-11,64;UBERON:0004121,2.95e-10,95;UBERON:0000924,2.95e-10,95;UBERON:0006601,2.95e-10,95;UBERON:0001049,3.21e-10,52;UBERON:0005068,3.21e-10,52;UBERON:0006241,3.21e-10,52;UBERON:0007135,3.21e-10,52;UBERON:0003056,5.44e-10,49;UBERON:0001017,7.58e-10,73;UBERON:0000955,2.80e-09,47;UBERON:0006238,2.80e-09,47;UBERON:0010314,3.21e-09,92;UBERON:0001016,4.04e-09,75;UBERON:0002020,5.14e-09,34;UBERON:0002616,6.79e-09,46;UBERON:0003080,1.39e-08,40;UBERON:0002780,1.52e-08,39;UBERON:0001890,1.52e-08,39;UBERON:0006240,1.52e-08,39;UBERON:0003528,1.03e-07,29;UBERON:0002791,1.03e-07,29;UBERON:0001893,1.03e-07,29;UBERON:0000922,4.30e-07,320
|phase1_expression=7.68714466103011,0.697950815278722,0.909998478779072,1.51232105653415,0,0.839396359559449,0.467225281191051,4.39019299701359,1.54867594366833,1.63845168425395,2.05461561870606,2.55270908785077,5.82082481766099,5.07038334030185,2.33176833270964,2.02475267389826,1.39912375625629,2.99689057090326,3.70208970735495,2.54633791078818,5.95303031057488,2.6808556824239,2.35079810225042,0.47997726838022,1.83527424853736,0.57423196411502,1.29228598847722,1.72376986148711,1.33016393619462,1.51218077855958,1.55211357458713,1.27006134691926,1.23012957516914,0,1.73310971850765,0.997407872150954,1.83752420636132,4.60384793810598,2.3440060335714,3.14114246384279,3.52938892818609,6.14740936462601,5.82612423637384,2.01434908760924,1.31790010585369,2.75320128242522,4.69434806608824,1.09012578190223,0.878744730937887,2.13872888981712,2.65974201088189,0,2.68452169692378,2.90144856804538,2.35265659399725,1.28629718017973,1.71920063963254,2.57836046138721,10.3181395038395,5.81890077199236,6.97214543856797,1.69422266034566,0,0,0.988866362566974,0,1.79760066311043,1.53687322128622,11.8206158031665,8.91039192989158,9.46462326081219,4.28476476605705,5.30084498283872,11.6366259254206,9.96792898589658,15.6267193723704,7.70811166995721,6.38436690425939,8.1411462625809,10.6827893061457,8.41686321142169,12.5019208933622,5.58365998002762,3.93933827022176,7.02871939773326,8.54422897873636,10.8202477407318,13.4207600994216,3.10477392666055,2.34271836331035,3.47837386442013,0.860423876981386,1.3599426674155,3.2382191498269,2.59910566979068,3.58421509677868,1.82577746171277,2.04516387093669,2.07828803682295,1.7666978725517,5.49289337129054,3.84979432242953,15.2883143823987,0,2.59789249213457,3.54703811665138,4.04419556011827,2.39786147410026,3.36619248741323,4.75014845007439,3.99016251562112,4.87144765299426,2.99800146432876,5.42601505989441,5.99702406392095,4.64966387919799,3.21353458054686,4.19338135067744,3.5384422077995,4.69123864847487,3.3126227769059,2.42437626567611,5.59175283654366,10.5401086924157,7.33063473847093,1.27728527604296,2.99537811264801,1.79970819298022,1.77898317902291,5.39246301857362,7.32000964509802,10.5549655774806,5.73620256634512,7.67146371990992,6.2336413367868,7.13861557498134,6.41587992256993,3.4833951770826,3.28539585963777,4.41927897361595,5.33493816147085,6.43725892413724,7.02242306240862,6.48030716693575,5.57899293040888,7.17436833595159,7.68354141389776,4.9153640440413,4.095791865724,9.26619792822314,9.50136070485324,5.2606975782618,8.61946472599353,8.00979983000983,6.99659263787008,11.1459189418356,0.702213187313235,0.772043721344145,1.98914449576915,4.97101854085205,4.69052119962192,3.24111710629827,5.20838418287463,4.52557733019029,4.62801338662135,4.65067889500816,5.36546802799238,4.55384835231961,4.27855609775049,4.92502392237286,5.02626619184305,3.94739966048397,6.36695334344047,4.2946054003319,7.36014819974445,11.216602749342,1.98251269790279,1.58670339998127,6.18535926552179,7.89604684325491,3.47942145569652,3.42861991859682,3.33567065767305,2.66315876557583,1.42358718463353,2.9645811850322,4.52403375840485,3.18330355265841,4.09424582950152,0.898819408654221,1.94524244887225,2.38969527905241,2.0863469104839,5.25543158004753,9.01661885384643,7.127796474586,4.46090720485539,3.71719845418688,4.86921335856781,4.72352473534727,5.80895293013087,2.83813477020141,2.37162101669719,1.33476084572875,1.96558995113203,1.34917267430912,1.62288097110802,1.68824011826692,2.29163266603278,3.45235364940973,2.7562988551756,3.0201755450689,1.43768206527355,1.86070473834252,3.74445207737473,1.01031551178845,2.87035861635059,0.964887042726734,4.61882975416512,4.35830247072115,3.91115943460862,4.2436271443797,4.92849521405854,5.52770649557992,5.71304738126433,4.29294025287157,6.9359463406724,3.32197034473162,6.218735977642,5.89907932976657,3.10832967358612,3.03763023021174,1.50791283939272,0.54390568381871,3.93411418415229,4.13905119457099,5.77982123956051,6.21221938938677,5.40985319743029,2.7771801992481,4.73262329124385,3.90438744296638,3.23135096599198,4.06246956519338,4.90157082981267,5.66153061577665,4.85772842009873,4.67609372658099,5.53402889125133,8.03303291054518,5.96148357874728,4.62970569534864,5.53815661802159,5.1140738121486,0,3.39892890616974,2.72091201268276,3.58349651536206,0.885905678642318,3.68922177532713,3.10113951801865,6.18007340111759,4.27796854061666,2.52829406348653,2.10837217149998,3.09406629744561,7.83011093233712,8.10274923140896,2.8458910432206,4.92975180572662,9.22169214939823,6.42127743367454,5.75921572107423,1.8267896946876,2.11204537257339,5.71946591332314,4.41056796109924,7.91454014119104,4.35953952078945,6.93598636673792,3.9392873521035,3.77524069413641,5.24665505933731,5.00648315428376,2.39219233116994,5.15967169908056,4.07427960213366,2.63715839806567,2.7338845544205,2.74533807847827,2.71965487990169,3.49878630809145,2.62579950228405,1.90934123603023,6.01038387804157,7.9294592179471,5.18425635944646,5.64538399239065,6.11415178489297,3.77620169877498,3.30613822901344,2.09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|phase1_expression=7.68714466103011,0.697950815278722,0.909998478779072,1.51232105653415,0,0.839396359559449,0.467225281191051,4.39019299701359,1.54867594366833,1.63845168425395,2.05461561870606,2.55270908785077,5.82082481766099,5.07038334030185,2.33176833270964,2.02475267389826,1.39912375625629,2.99689057090326,3.70208970735495,2.54633791078818,5.95303031057488,2.6808556824239,2.35079810225042,0.47997726838022,1.83527424853736,0.57423196411502,1.29228598847722,1.72376986148711,1.33016393619462,1.51218077855958,1.55211357458713,1.27006134691926,1.23012957516914,0,1.73310971850765,0.997407872150954,1.83752420636132,4.60384793810598,2.3440060335714,3.14114246384279,3.52938892818609,6.14740936462601,5.82612423637384,2.01434908760924,1.31790010585369,2.75320128242522,4.69434806608824,1.09012578190223,0.878744730937887,2.13872888981712,2.65974201088189,0,2.68452169692378,2.90144856804538,2.35265659399725,1.28629718017973,1.71920063963254,2.57836046138721,10.3181395038395,5.81890077199236,6.97214543856797,1.69422266034566,0,0,0.988866362566974,0,1.79760066311043,1.53687322128622,11.8206158031665,8.91039192989158,9.46462326081219,4.28476476605705,5.30084498283872,11.6366259254206,9.96792898589658,15.6267193723704,7.70811166995721,6.38436690425939,8.1411462625809,10.6827893061457,8.41686321142169,12.5019208933622,5.58365998002762,3.93933827022176,7.02871939773326,8.54422897873636,10.8202477407318,13.4207600994216,3.10477392666055,2.34271836331035,3.47837386442013,0.860423876981386,1.3599426674155,3.2382191498269,2.59910566979068,3.58421509677868,1.82577746171277,2.04516387093669,2.07828803682295,1.7666978725517,5.49289337129054,3.84979432242953,15.2883143823987,0,2.59789249213457,3.54703811665138,4.04419556011827,2.39786147410026,3.36619248741323,4.75014845007439,3.99016251562112,4.87144765299426,2.99800146432876,5.42601505989441,5.99702406392095,4.64966387919799,3.21353458054686,4.19338135067744,3.5384422077995,4.69123864847487,3.3126227769059,2.42437626567611,5.59175283654366,10.5401086924157,7.33063473847093,1.27728527604296,2.99537811264801,1.79970819298022,1.77898317902291,5.39246301857362,7.32000964509802,10.5549655774806,5.73620256634512,7.67146371990992,6.2336413367868,7.13861557498134,6.41587992256993,3.4833951770826,3.28539585963777,4.41927897361595,5.33493816147085,6.43725892413724,7.02242306240862,6.48030716693575,5.57899293040888,7.17436833595159,7.68354141389776,4.9153640440413,4.095791865724,9.26619792822314,9.50136070485324,5.2606975782618,8.61946472599353,8.00979983000983,6.99659263787008,11.1459189418356,0.702213187313235,0.772043721344145,1.98914449576915,4.97101854085205,4.69052119962192,3.24111710629827,5.20838418287463,4.52557733019029,4.62801338662135,4.65067889500816,5.36546802799238,4.55384835231961,4.27855609775049,4.92502392237286,5.02626619184305,3.94739966048397,6.36695334344047,4.2946054003319,7.36014819974445,11.216602749342,1.98251269790279,1.58670339998127,6.18535926552179,7.89604684325491,3.47942145569652,3.42861991859682,3.33567065767305,2.66315876557583,1.42358718463353,2.9645811850322,4.52403375840485,3.18330355265841,4.09424582950152,0.898819408654221,1.94524244887225,2.38969527905241,2.0863469104839,5.25543158004753,9.01661885384643,7.127796474586,4.46090720485539,3.71719845418688,4.86921335856781,4.72352473534727,5.80895293013087,2.83813477020141,2.37162101669719,1.33476084572875,1.96558995113203,1.34917267430912,1.62288097110802,1.68824011826692,2.29163266603278,3.45235364940973,2.7562988551756,3.0201755450689,1.43768206527355,1.86070473834252,3.74445207737473,1.01031551178845,2.87035861635059,0.964887042726734,4.61882975416512,4.35830247072115,3.91115943460862,4.2436271443797,4.92849521405854,5.52770649557992,5.71304738126433,4.29294025287157,6.9359463406724,3.32197034473162,6.218735977642,5.89907932976657,3.10832967358612,3.03763023021174,1.50791283939272,0.54390568381871,3.93411418415229,4.13905119457099,5.77982123956051,6.21221938938677,5.40985319743029,2.7771801992481,4.73262329124385,3.90438744296638,3.23135096599198,4.06246956519338,4.90157082981267,5.66153061577665,4.85772842009873,4.67609372658099,5.53402889125133,8.03303291054518,5.96148357874728,4.62970569534864,5.53815661802159,5.1140738121486,0,3.39892890616974,2.72091201268276,3.58349651536206,0.885905678642318,3.68922177532713,3.10113951801865,6.18007340111759,4.27796854061666,2.52829406348653,2.10837217149998,3.09406629744561,7.83011093233712,8.10274923140896,2.8458910432206,4.92975180572662,9.22169214939823,6.42127743367454,5.75921572107423,1.8267896946876,2.11204537257339,5.71946591332314,4.41056796109924,7.91454014119104,4.35953952078945,6.93598636673792,3.9392873521035,3.77524069413641,5.24665505933731,5.00648315428376,2.39219233116994,5.15967169908056,4.07427960213366,2.63715839806567,2.7338845544205,2.74533807847827,2.71965487990169,3.49878630809145,2.62579950228405,1.90934123603023,6.01038387804157,7.9294592179471,5.18425635944646,5.64538399239065,6.11415178489297,3.77620169877498,3.30613822901344,2.09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|short_description=p3@Mier1
|short_description=p3@Mier1
}}
}}

Latest revision as of 02:02, 26 September 2015

Short description:p3@Mier1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Mier1_5end
Coexpression cluster:NA
Association with transcript: -2bp_to_ENSMUST00000143417_5end
EntrezGene:Mier1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Mier1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.07
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C310.32
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.82
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.42
Mouse Schwann, donor1.CNhs12507.11728-123D93.10
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D74.75
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C16.00
adrenal gland, neonate N25.CNhs11223.1377-27I34.65
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F54.69
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F110.55
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B27.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.42
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C97.02
eyeball, embryo E17.CNhs11023.1261-18D46.48
eyeball, neonate N00.CNhs11207.633-15C65.58
eyeball, neonate N01.CNhs11140.1532-43E77.17
eyeball, neonate N02.CNhs11205.1551-44G87.68
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H29.27
forelimb, embryo E13.CNhs10589.384-1E29.50
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I611.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C64.63
heart, embryo E17.CNhs11025.479-18E54.65
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G14.93
heart, neonate N16.CNhs11209.782-15G15.03
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G111.22
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F85.26
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I27.13
kidney, embryo E18.CNhs11001.1288-20C74.46
kidney, neonate N00.CNhs11214.646-21G73.72
kidney, neonate N10.CNhs11206.758-6D54.87
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E56.94
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A45.90
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I75.96
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B99.22
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F55.76
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G35.72
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C37.91
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H36.94
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D45.18
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A93.31
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I12.72
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F58.67
testis, embryo E15.CNhs11034.443-27C58.60
testis, embryo E16.CNhs11033.470-26G58.17
testis, embryo E17.CNhs11029.486-18I57.62
testis, embryo E18.CNhs11027.503-18G58.79
testis, neonate N00.CNhs11189.1300-22B76.57
testis, neonate N07.CNhs11222.726-26I49.24
testis, neonate N10.CNhs11204.763-44D913.84
testis, neonate N20.CNhs11110.839-18H312.56
testis, neonate N30.CNhs11130.1391-42E29.22
thymus, adult.CNhs10471.38-12B58.53
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I24.01
thymus, embryo E16.CNhs11002.456-26C55.59
thymus, embryo E17.CNhs10581.478-18C16.27
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F89.62
thymus, neonate N03.CNhs11137.2104-43C710.93
thymus, neonate N06.CNhs11197.681-26C412.12
thymus, neonate N07.CNhs11211.713-19D313.11
thymus, neonate N10.CNhs11194.748-24E413.01
thymus, neonate N20.CNhs11186.820-7A212.77
thymus, neonate N25.CNhs11125.1362-25G79.91
thymus, neonate N30.CNhs11132.1393-42G214.73
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.49
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.53
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I86.43
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H27.51
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.06e-0923
neuroblast (sensu Vertebrata)3.06e-0923
neuron5.64e-0833
neuronal stem cell5.64e-0833
neuroblast5.64e-0833
electrically signaling cell5.64e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.95e-1154
ecto-epithelium3.10e-1173
neurectoderm4.45e-1164
neural plate4.45e-1164
presumptive neural plate4.45e-1164
ectoderm-derived structure2.95e-1095
ectoderm2.95e-1095
presumptive ectoderm2.95e-1095
neural tube3.21e-1052
neural rod3.21e-1052
future spinal cord3.21e-1052
neural keel3.21e-1052
pre-chordal neural plate5.44e-1049
central nervous system7.58e-1073
brain2.80e-0947
future brain2.80e-0947
structure with developmental contribution from neural crest3.21e-0992
nervous system4.04e-0975
gray matter5.14e-0934
regional part of brain6.79e-0946
anterior neural tube1.39e-0840
regional part of forebrain1.52e-0839
forebrain1.52e-0839
future forebrain1.52e-0839
brain grey matter1.03e-0729
regional part of telencephalon1.03e-0729
telencephalon1.03e-0729
embryo4.30e-07320
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