FFCP PHASE1:Mm9::chr14:55711198..55711258,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=239102 | |EntrezGene=239102 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q2MHN3 | |UniProt=Q2MHN3 | ||
|association_with_transcript=-313bp_to_ENSMUST00000036328,NM_001039198,uc007txz.1_5end | |association_with_transcript=-313bp_to_ENSMUST00000036328,NM_001039198,uc007txz.1_5end | ||
|cluster_id=chr14:55711198..55711258,- | |||
|description=CAGE_peak_1_at_Zfhx2_5end | |description=CAGE_peak_1_at_Zfhx2_5end | ||
|id=chr14:55711198..55711258,- | |id=chr14:55711198..55711258,- | ||
|ontology_enrichment_celltype=CL:0000540!1.03e-13!33;CL:0000047!1.03e-13!33;CL:0000031!1.03e-13!33;CL:0000404!1.03e-13!33;CL:0000117!1.46e-11!23;CL:0000337!1.46e-11!23;CL:0000393!6.16e-08!39;CL:0000211!6.16e-08!39;CL:0002319!2.96e-07!43;CL:0000221!6.35e-07!44;CL:0000133!6.35e-07!44 | |ontology_enrichment_celltype=CL:0000540!1.03e-13!33;CL:0000047!1.03e-13!33;CL:0000031!1.03e-13!33;CL:0000404!1.03e-13!33;CL:0000117!1.46e-11!23;CL:0000337!1.46e-11!23;CL:0000393!6.16e-08!39;CL:0000211!6.16e-08!39;CL:0002319!2.96e-07!43;CL:0000221!6.35e-07!44;CL:0000133!6.35e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.01e-13,33;CL:0000047,1.01e-13,33;CL:0000031,1.01e-13,33;CL:0000404,1.01e-13,33;CL:0000117,1.44e-11,23;CL:0000337,1.44e-11,23;CL:0000393,5.33e-08,39;CL:0000211,5.33e-08,39;CL:0002319,3.56e-07,43;CL:0000221,7.59e-07,44;CL:0000133,7.59e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.28e-23!73;UBERON:0005743!1.28e-23!73;UBERON:0000073!7.58e-22!75;UBERON:0001016!7.58e-22!75;UBERON:0002346!1.64e-21!71;UBERON:0003075!1.64e-21!71;UBERON:0007284!1.64e-21!71;UBERON:0004121!2.73e-21!102;UBERON:0000924!2.73e-21!102;UBERON:0006601!2.73e-21!102;UBERON:0000033!8.37e-21!63;UBERON:0003056!4.04e-19!49;UBERON:0000955!1.01e-18!50;UBERON:0006238!1.01e-18!50;UBERON:0001049!1.97e-18!52;UBERON:0005068!1.97e-18!52;UBERON:0006241!1.97e-18!52;UBERON:0007135!1.97e-18!52;UBERON:0002616!3.82e-18!49;UBERON:0000153!1.17e-16!94;UBERON:0007811!3.99e-16!86;UBERON:0003080!4.65e-16!40;UBERON:0002780!1.82e-15!39;UBERON:0001890!1.82e-15!39;UBERON:0006240!1.82e-15!39;UBERON:0002020!3.56e-12!34;UBERON:0002791!1.57e-10!29;UBERON:0003528!1.57e-10!29;UBERON:0001893!1.57e-10!29 | |ontology_enrichment_uberon=UBERON:0001017!1.28e-23!73;UBERON:0005743!1.28e-23!73;UBERON:0000073!7.58e-22!75;UBERON:0001016!7.58e-22!75;UBERON:0002346!1.64e-21!71;UBERON:0003075!1.64e-21!71;UBERON:0007284!1.64e-21!71;UBERON:0004121!2.73e-21!102;UBERON:0000924!2.73e-21!102;UBERON:0006601!2.73e-21!102;UBERON:0000033!8.37e-21!63;UBERON:0003056!4.04e-19!49;UBERON:0000955!1.01e-18!50;UBERON:0006238!1.01e-18!50;UBERON:0001049!1.97e-18!52;UBERON:0005068!1.97e-18!52;UBERON:0006241!1.97e-18!52;UBERON:0007135!1.97e-18!52;UBERON:0002616!3.82e-18!49;UBERON:0000153!1.17e-16!94;UBERON:0007811!3.99e-16!86;UBERON:0003080!4.65e-16!40;UBERON:0002780!1.82e-15!39;UBERON:0001890!1.82e-15!39;UBERON:0006240!1.82e-15!39;UBERON:0002020!3.56e-12!34;UBERON:0002791!1.57e-10!29;UBERON:0003528!1.57e-10!29;UBERON:0001893!1.57e-10!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.68e-23,73;UBERON:0002346,9.76e-23,64;UBERON:0003075,9.76e-23,64;UBERON:0007284,9.76e-23,64;UBERON:0004121,8.71e-22,95;UBERON:0000924,8.71e-22,95;UBERON:0006601,8.71e-22,95;UBERON:0001016,9.81e-22,75;UBERON:0000073,6.26e-20,54;UBERON:0003056,3.94e-19,49;UBERON:0001049,2.23e-18,52;UBERON:0005068,2.23e-18,52;UBERON:0006241,2.23e-18,52;UBERON:0007135,2.23e-18,52;UBERON:0010371,3.75e-18,73;UBERON:0000955,1.27e-16,47;UBERON:0006238,1.27e-16,47;UBERON:0003080,4.56e-16,40;UBERON:0002616,4.62e-16,46;UBERON:0010314,6.16e-16,92;UBERON:0002780,1.79e-15,39;UBERON:0001890,1.79e-15,39;UBERON:0006240,1.79e-15,39;UBERON:0002020,3.51e-12,34;UBERON:0003528,1.56e-10,29;UBERON:0002791,1.56e-10,29;UBERON:0001893,1.56e-10,29 | |||
|phase1_expression=2.5623815536767,2.44282785347553,0.454999239389536,4.83942738090928,2.00358291978539,3.69334398206158,4.43864017131499,14.2035655785734,3.66050677594334,3.97909694747389,2.22583358693156,1.91453181588807,9.58724087614752,13.1130603628496,3.33109761815663,2.22722794128809,2.09868563438444,8.51747846467242,6.58149281307546,6.79023442876848,7.39876624314307,5.26242041364692,2.08959831311148,2.55987876469451,2.52350209173887,1.14846392823004,0.430761996159075,2.58565479223067,2.09025761402011,2.77233142735924,2.43903561720835,1.90509202037889,4.30545351309199,0,2.59966457776147,1.32987716286794,1.83752420636132,0,1.5626706890476,0,0.588231488031014,0,1.45653105909346,1.25896817975577,1.21652317463417,1.28482726513177,0.782391344348039,1.52617609466313,1.97717564461025,2.3331587888914,0.839918529752175,1.43752564364972,7.21465206048266,15.9579671242496,10.4189077734164,0,0.286533439938757,0,20.2316460859598,14.2827564403449,20.9164363157039,0,0,4.94944844504769,3.9554654502679,3.5524005747305,4.49400165777607,5.37905627450176,7.36196247390191,9.85543349821342,5.25812403378455,6.56997264128748,6.62605622854841,9.43179153955146,15.4311208339361,10.1114066527102,28.6301290598411,22.7283461791634,21.1977015893616,28.8830970129125,33.8504281328916,23.962015045611,11.725685958058,10.1297269805702,15.279824777681,12.0797720044204,9.681274294339,16.4031512326265,1.66597625333005,1.66257432234928,8.40607017234866,1.72084775396277,0,2.69851595818909,1.94932925234301,0.448026887097336,3.23022166303029,0,0,0,2.95771181531029,0,0,0,1.73192832808971,2.28023878927589,1.51657333504435,2.8545969929765,16.3130866697718,5.49235914539852,5.72501578328248,5.78484408793068,5.76538743140146,4.37095657602605,3.52766121407114,3.14166478324189,3.95511948374998,4.77177877835708,5.30766331169925,1.61766849947409,4.41683036920787,3.39412677194655,7.45567044872489,18.4451902117275,20.3163305609051,3.83185582812887,1.67741174308288,0.599902730993408,0.762421362438388,16.027598416316,16.9275223042892,13.6963243803022,13.0368240144207,13.0414883238469,23.4800490352303,16.3863675698435,1.01839363850316,2.36373244159177,1.76905930903572,7.57590681191306,7.28674480591141,5.0578462975364,10.4436035287103,12.0563854268572,11.0899493616664,11.0177799444971,10.5882948752494,7.76110112217047,6.68260778091811,9.26619792822314,6.33424046990216,4.82230611340665,3.89266148915837,4.179025998266,2.88094990971121,3.98068533636986,0,0.772043721344145,0.852490498186778,7.04227626620706,6.3322036194896,6.12211008967451,6.62885259638589,6.49321964766433,6.32495162838251,7.20855228726264,4.82892122519315,3.73649095574942,3.45575684818309,1.31333971263276,3.64809642956351,3.50879969820798,3.07370161407471,3.35516046900929,14.0894265537965,3.80747065803352,4.29544417878937,3.96675849995316,4.90562976231038,5.34144345279009,6.18563814346048,5.64713868945359,4.44756087689741,3.99473814836374,4.74529061544512,1.4822905925161,1.00534083520108,2.38747766449381,1.75467678407208,4.49409704327111,4.10662294761919,2.58883655230677,4.1726938209678,6.740662243974,6.76246414038483,5.7022371796688,3.87904974335251,2.87556861550306,4.67950374719504,5.16635517928608,5.18095801876537,3.82531208157582,2.07516838961004,2.66952169145751,1.76903095601883,2.24862112384854,2.02860121388503,1.92941727801933,2.03700681425136,3.74004978686054,1.78348749452539,1.37280706594041,2.87536413054709,2.23284568601102,2.80833905803104,2.52578877947112,1.79397413521912,0.964887042726734,4.24932337383191,3.03186258832776,6.19266910479698,4.2436271443797,6.10194645550105,10.3853879613926,6.9032655856944,4.09780660501378,3.94087860265477,2.43611158613652,3.18909537314974,4.58817281204066,6.56202931090403,4.48412081602686,3.01582567878545,2.71952841909355,3.44234991113325,1.65562047782839,12.2018448390722,10.3146284201139,0.163934945376675,5.04941854408746,7.2566890465739,8.98009111882268,8.83235930704476,8.12493913038677,7.5751549188014,11.889214293131,7.69140333182299,8.76767573733936,12.2539211163422,14.7807805554031,3.83238230062325,2.67098405500883,0.651547837414304,3.29940245945071,1.32745138339963,3.39892890616974,3.32555912661226,3.77210159511796,3.83892460745005,3.99665692327106,3.87642439752332,2.90826983582004,1.42598951353889,3.79244109522979,2.10837217149998,2.06271086496374,31.3204437293485,5.94201610303324,8.14959707831353,8.3591443662321,17.0246624296583,18.9070946658195,16.29035303961,18.8768268451052,0.938686832254841,1.27099242518292,2.42581237860458,4.122156323537,1.45317984026315,3.07595917133595,4.05865969610664,5.0883678920969,3.78925087618806,12.6089205367147,4.78438466233988,1.857481811669,1.66675074632741,2.82552685507037,3.69074414846768,2.51655990527175,3.39956859987711,2.37917468950219,2.62579950228405,5.72802370809068,6.95939185878498,6.91286188231286,4.42821897369385,2.71814784818809,4.58561383866973,2.42755823492677,2.72756403893609,1.57053565190418,4.66613903850454,7.45607175704311,3.94585057078933,3.88743019714345,2.31641886639937,4.4723773319131,3.48731523389874,5.91346439217724,6.33729088687071,5.59878854828985,5.87212328783981,6.52277126230216,3.45636007509439,8.53230025696081,3.85177909051312,4.21114924375792,3.50786222040047,5.01274747868948,4.76835251475036,3.24527713703916,4.87375439676105,5.45218829719997,4.11516755936999,5.34378781225255,6.43222012882366,7.21588812302471,7.12949103307571,4.98806843953465,0.221985953374065,0.448569283047378,0.503653849092235,6.56844619709447,3.19060208267009,4.02933573387983,5.35920947697665,3.51100472824754,13.5540442228096,10.1271552031579,8.59343270159095,8.42080593484069,14.3867329151835,10.5755145634558,14.8504950050997,10.3573876741571,14.5005570874945,18.1216109113137,6.53860289780313,15.9609949360412,6.82934423016537,6.07766792670735,4.40187641518763,6.61836630420051,6.44515510624684,7.62329711783909,5.77654577265267,6.82282471762253,7.85785829659743,5.65879024158229,6.18033949301224,6.6586158501064,6.60507892989553,6.19181798667996,5.79421629724277,4.24400285020151,6.1812885120496,6.77115032618228,11.3146853287187,6.38912902173615,7.39152188836695,4.50573891560218,5.92889096616583,7.02301245500915,6.76833499629258,4.73525480588117,6.3827933507555,6.73370725989286,4.38949567059444,5.61475549540712,6.95692773388472,6.04253680625267,6.17301155139652,9.49280196164194,7.48581147025307,4.29742108096597,2.67803664896381,1.32354851471709,1.85494268496337 | |phase1_expression=2.5623815536767,2.44282785347553,0.454999239389536,4.83942738090928,2.00358291978539,3.69334398206158,4.43864017131499,14.2035655785734,3.66050677594334,3.97909694747389,2.22583358693156,1.91453181588807,9.58724087614752,13.1130603628496,3.33109761815663,2.22722794128809,2.09868563438444,8.51747846467242,6.58149281307546,6.79023442876848,7.39876624314307,5.26242041364692,2.08959831311148,2.55987876469451,2.52350209173887,1.14846392823004,0.430761996159075,2.58565479223067,2.09025761402011,2.77233142735924,2.43903561720835,1.90509202037889,4.30545351309199,0,2.59966457776147,1.32987716286794,1.83752420636132,0,1.5626706890476,0,0.588231488031014,0,1.45653105909346,1.25896817975577,1.21652317463417,1.28482726513177,0.782391344348039,1.52617609466313,1.97717564461025,2.3331587888914,0.839918529752175,1.43752564364972,7.21465206048266,15.9579671242496,10.4189077734164,0,0.286533439938757,0,20.2316460859598,14.2827564403449,20.9164363157039,0,0,4.94944844504769,3.9554654502679,3.5524005747305,4.49400165777607,5.37905627450176,7.36196247390191,9.85543349821342,5.25812403378455,6.56997264128748,6.62605622854841,9.43179153955146,15.4311208339361,10.1114066527102,28.6301290598411,22.7283461791634,21.1977015893616,28.8830970129125,33.8504281328916,23.962015045611,11.725685958058,10.1297269805702,15.279824777681,12.0797720044204,9.681274294339,16.4031512326265,1.66597625333005,1.66257432234928,8.40607017234866,1.72084775396277,0,2.69851595818909,1.94932925234301,0.448026887097336,3.23022166303029,0,0,0,2.95771181531029,0,0,0,1.73192832808971,2.28023878927589,1.51657333504435,2.8545969929765,16.3130866697718,5.49235914539852,5.72501578328248,5.78484408793068,5.76538743140146,4.37095657602605,3.52766121407114,3.14166478324189,3.95511948374998,4.77177877835708,5.30766331169925,1.61766849947409,4.41683036920787,3.39412677194655,7.45567044872489,18.4451902117275,20.3163305609051,3.83185582812887,1.67741174308288,0.599902730993408,0.762421362438388,16.027598416316,16.9275223042892,13.6963243803022,13.0368240144207,13.0414883238469,23.4800490352303,16.3863675698435,1.01839363850316,2.36373244159177,1.76905930903572,7.57590681191306,7.28674480591141,5.0578462975364,10.4436035287103,12.0563854268572,11.0899493616664,11.0177799444971,10.5882948752494,7.76110112217047,6.68260778091811,9.26619792822314,6.33424046990216,4.82230611340665,3.89266148915837,4.179025998266,2.88094990971121,3.98068533636986,0,0.772043721344145,0.852490498186778,7.04227626620706,6.3322036194896,6.12211008967451,6.62885259638589,6.49321964766433,6.32495162838251,7.20855228726264,4.82892122519315,3.73649095574942,3.45575684818309,1.31333971263276,3.64809642956351,3.50879969820798,3.07370161407471,3.35516046900929,14.0894265537965,3.80747065803352,4.29544417878937,3.96675849995316,4.90562976231038,5.34144345279009,6.18563814346048,5.64713868945359,4.44756087689741,3.99473814836374,4.74529061544512,1.4822905925161,1.00534083520108,2.38747766449381,1.75467678407208,4.49409704327111,4.10662294761919,2.58883655230677,4.1726938209678,6.740662243974,6.76246414038483,5.7022371796688,3.87904974335251,2.87556861550306,4.67950374719504,5.16635517928608,5.18095801876537,3.82531208157582,2.07516838961004,2.66952169145751,1.76903095601883,2.24862112384854,2.02860121388503,1.92941727801933,2.03700681425136,3.74004978686054,1.78348749452539,1.37280706594041,2.87536413054709,2.23284568601102,2.80833905803104,2.52578877947112,1.79397413521912,0.964887042726734,4.24932337383191,3.03186258832776,6.19266910479698,4.2436271443797,6.10194645550105,10.3853879613926,6.9032655856944,4.09780660501378,3.94087860265477,2.43611158613652,3.18909537314974,4.58817281204066,6.56202931090403,4.48412081602686,3.01582567878545,2.71952841909355,3.44234991113325,1.65562047782839,12.2018448390722,10.3146284201139,0.163934945376675,5.04941854408746,7.2566890465739,8.98009111882268,8.83235930704476,8.12493913038677,7.5751549188014,11.889214293131,7.69140333182299,8.76767573733936,12.2539211163422,14.7807805554031,3.83238230062325,2.67098405500883,0.651547837414304,3.29940245945071,1.32745138339963,3.39892890616974,3.32555912661226,3.77210159511796,3.83892460745005,3.99665692327106,3.87642439752332,2.90826983582004,1.42598951353889,3.79244109522979,2.10837217149998,2.06271086496374,31.3204437293485,5.94201610303324,8.14959707831353,8.3591443662321,17.0246624296583,18.9070946658195,16.29035303961,18.8768268451052,0.938686832254841,1.27099242518292,2.42581237860458,4.122156323537,1.45317984026315,3.07595917133595,4.05865969610664,5.0883678920969,3.78925087618806,12.6089205367147,4.78438466233988,1.857481811669,1.66675074632741,2.82552685507037,3.69074414846768,2.51655990527175,3.39956859987711,2.37917468950219,2.62579950228405,5.72802370809068,6.95939185878498,6.91286188231286,4.42821897369385,2.71814784818809,4.58561383866973,2.42755823492677,2.72756403893609,1.57053565190418,4.66613903850454,7.45607175704311,3.94585057078933,3.88743019714345,2.31641886639937,4.4723773319131,3.48731523389874,5.91346439217724,6.33729088687071,5.59878854828985,5.87212328783981,6.52277126230216,3.45636007509439,8.53230025696081,3.85177909051312,4.21114924375792,3.50786222040047,5.01274747868948,4.76835251475036,3.24527713703916,4.87375439676105,5.45218829719997,4.11516755936999,5.34378781225255,6.43222012882366,7.21588812302471,7.12949103307571,4.98806843953465,0.221985953374065,0.448569283047378,0.503653849092235,6.56844619709447,3.19060208267009,4.02933573387983,5.35920947697665,3.51100472824754,13.5540442228096,10.1271552031579,8.59343270159095,8.42080593484069,14.3867329151835,10.5755145634558,14.8504950050997,10.3573876741571,14.5005570874945,18.1216109113137,6.53860289780313,15.9609949360412,6.82934423016537,6.07766792670735,4.40187641518763,6.61836630420051,6.44515510624684,7.62329711783909,5.77654577265267,6.82282471762253,7.85785829659743,5.65879024158229,6.18033949301224,6.6586158501064,6.60507892989553,6.19181798667996,5.79421629724277,4.24400285020151,6.1812885120496,6.77115032618228,11.3146853287187,6.38912902173615,7.39152188836695,4.50573891560218,5.92889096616583,7.02301245500915,6.76833499629258,4.73525480588117,6.3827933507555,6.73370725989286,4.38949567059444,5.61475549540712,6.95692773388472,6.04253680625267,6.17301155139652,9.49280196164194,7.48581147025307,4.29742108096597,2.67803664896381,1.32354851471709,1.85494268496337 | ||
|short_description=p1@Zfhx2 | |short_description=p1@Zfhx2 | ||
}} | }} |
Latest revision as of 03:25, 26 September 2015
Short description: | p1@Zfhx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfhx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -313bp_to_ENSMUST00000036328, NM_001039198, uc007txz.1_5end |
EntrezGene: | Zfhx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.01e-13 | 33 |
neuronal stem cell | 1.01e-13 | 33 |
neuroblast | 1.01e-13 | 33 |
electrically signaling cell | 1.01e-13 | 33 |
CNS neuron (sensu Vertebrata) | 1.44e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.44e-11 | 23 |
electrically responsive cell | 5.33e-08 | 39 |
electrically active cell | 5.33e-08 | 39 |
neural cell | 3.56e-07 | 43 |
ectodermal cell | 7.59e-07 | 44 |
neurectodermal cell | 7.59e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.68e-23 | 73 |
neurectoderm | 9.76e-23 | 64 |
neural plate | 9.76e-23 | 64 |
presumptive neural plate | 9.76e-23 | 64 |
ectoderm-derived structure | 8.71e-22 | 95 |
ectoderm | 8.71e-22 | 95 |
presumptive ectoderm | 8.71e-22 | 95 |
nervous system | 9.81e-22 | 75 |
regional part of nervous system | 6.26e-20 | 54 |
pre-chordal neural plate | 3.94e-19 | 49 |
neural tube | 2.23e-18 | 52 |
neural rod | 2.23e-18 | 52 |
future spinal cord | 2.23e-18 | 52 |
neural keel | 2.23e-18 | 52 |
ecto-epithelium | 3.75e-18 | 73 |
brain | 1.27e-16 | 47 |
future brain | 1.27e-16 | 47 |
anterior neural tube | 4.56e-16 | 40 |
regional part of brain | 4.62e-16 | 46 |
structure with developmental contribution from neural crest | 6.16e-16 | 92 |
regional part of forebrain | 1.79e-15 | 39 |
forebrain | 1.79e-15 | 39 |
future forebrain | 1.79e-15 | 39 |
gray matter | 3.51e-12 | 34 |
brain grey matter | 1.56e-10 | 29 |
regional part of telencephalon | 1.56e-10 | 29 |
telencephalon | 1.56e-10 | 29 |