FFCP PHASE1:Mm9::chr10:62849298..62849324,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:62849298..62849324,+ to FFCP PHASE1:Mm9::chr10:62849298..62849324,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=30045 | |EntrezGene=30045 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9R022,Q9CWA0 | |UniProt=Q9R022,Q9CWA0 | ||
|association_with_transcript=0bp_to_ENSMUST00000043317,ENSMUST00000136832,NM_013888,uc007fkg.2_5end | |||
|cluster_id=chr10:62849298..62849324,+ | |||
|description=CAGE_peak_3_at_Dnajc12_5end | |||
|id=chr10:62849298..62849324,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.05e-13!200;UBERON:0000033!3.13e-12!63;UBERON:0004111!1.71e-11!122;UBERON:0002346!2.30e-11!71;UBERON:0003075!2.30e-11!71;UBERON:0007284!2.30e-11!71;UBERON:0004121!1.37e-10!102;UBERON:0000924!1.37e-10!102;UBERON:0006601!1.37e-10!102;UBERON:0000025!2.93e-10!114;UBERON:0001049!1.04e-09!52;UBERON:0005068!1.04e-09!52;UBERON:0006241!1.04e-09!52;UBERON:0007135!1.04e-09!52;UBERON:0000955!3.50e-09!50;UBERON:0006238!3.50e-09!50;UBERON:0003056!5.42e-09!49;UBERON:0002616!6.26e-09!49;UBERON:0001017!1.76e-08!73;UBERON:0005743!1.76e-08!73;UBERON:0000073!6.18e-08!75;UBERON:0001016!6.18e-08!75;UBERON:0003080!5.40e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-13,54;UBERON:0002346,1.96e-13,64;UBERON:0003075,1.96e-13,64;UBERON:0007284,1.96e-13,64;UBERON:0010371,3.37e-13,73;UBERON:0001049,3.03e-12,52;UBERON:0005068,3.03e-12,52;UBERON:0006241,3.03e-12,52;UBERON:0007135,3.03e-12,52;UBERON:0004121,3.46e-12,95;UBERON:0000924,3.46e-12,95;UBERON:0006601,3.46e-12,95;UBERON:0010314,3.88e-11,92;UBERON:0001017,6.29e-11,73;UBERON:0004111,9.78e-11,122;UBERON:0001016,3.12e-10,75;UBERON:0003056,4.21e-10,49;UBERON:0000955,1.14e-09,47;UBERON:0006238,1.14e-09,47;UBERON:0000025,1.68e-09,114;UBERON:0002616,2.41e-09,46;UBERON:0002020,6.88e-08,34;UBERON:0003080,1.01e-07,40;UBERON:0002780,4.03e-07,39;UBERON:0001890,4.03e-07,39;UBERON:0006240,4.03e-07,39 | |||
|phase1_expression=2.7225304007815,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0.684802919724823,0.262261207256992,0,0.202475267389826,0.699561878128147,0.630924330716475,0.137114433605739,0.42438965179803,3.31668831589172,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,0,0.430942465371778,0.570070258369122,0,0,0,0,0,0,0,0.204169356262369,0.837063261473815,1.5626706890476,1.0470474879476,0,0,0,2.01434908760924,2.43304634926835,0.734187008646726,0,0,1.75748946187577,1.94429899074283,0,0,0.335565212115473,0,0.336093799142464,0.257259436035947,0,0,2.42779753031517,2.11596391708813,0.633831403506179,0.338844532069132,0,0,0,0,0.898800331555214,3.07374644257244,0.518448061542388,0.405017814995072,0.210324961351382,1.71390590642282,3.53389665522582,0.367472397644862,0.383381884072945,0,6.60695285996332,3.57524546638526,3.37934373163736,0.791317726381163,1.09785172322892,2.6045668527838,6.14202597803038,7.87867654044352,3.81995619442025,2.06240009831567,1.99320353118744,2.60959224155421,0.454357159999104,0.302286240427142,1.15945795480671,4.30211938490693,0.679971333707751,3.77792234146472,2.59910566979068,2.68816132258401,5.33688796500657,1.1930122580464,0,0.70667914902068,1.54927761754349,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,3.19714863213368,0.776813650941515,3.11728492036132,0.867426633830679,0.608930956624282,0.230615497256059,1.50722640552623,0.823120949949934,1.88499886994513,0.247194967734374,1.87979163995885,0,1.7794353494215,1.32504911076236,1.45462575940567,0,4.9772735491963,7.33063473847093,0.510914110417183,0.11981512450592,0.599902730993408,0.254140454146129,5.24267237916879,2.74500361691176,0.628271760564322,3.12883776346098,2.30143911597297,4.36354893575076,2.59586020908412,0.712875546952214,1.8661045591514,1.51633655060205,2.52530227063769,1.04096354370163,1.60931473103431,1.0803727788321,1.50704817835715,0.680364991513279,2.17793324484245,2.15513966487376,4.39795730256327,0.646703978798527,0.945530400839096,0.879755620819744,0.876782929710299,0.834141747676794,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0.568326998791185,0.414251545071004,0.469052119962192,0.540186184383045,0.710234206755631,0.590292695242212,0.771335564436891,0.697601834251224,0.536546802799238,0.350296027101508,0.822799249567402,0.164167464079095,1.62137619091711,2.77779976108131,2.63460138349261,2.68412837520744,3.57492912559016,1.02904612379284,0,0.264450566663544,0.426576501070468,0.464473343720877,0.902072229254653,0.605050573870028,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0.502670417600539,0.994782360205754,0.19496408711912,0.898819408654221,0,0.597423819763102,0.569003702859245,0.571242563048644,0,1.01825663922657,1.16371492300575,0.420814919341911,1.7706230394792,4.57591458736767,6.27994911365499,7.77402132707343,4.15033677922008,0.166845105716094,0.982794975566015,0.899448449539415,0.202860121388503,0.241177159752417,0.763877555344259,0.575392274901621,0.486405680325106,0.823684239564244,2.87536413054709,2.23284568601102,1.87222603868736,3.53610429125956,5.02312757861354,4.3419916922703,1.47802552133284,0.189491411770485,0.488894929326078,0.848725428875941,0.704070744865506,0.837531287209079,0.952174563544055,0.195133647857799,0.945810864637146,0,0.318909537314974,0.983179888294428,1.38147985492716,1.01254341007058,1.50791283939272,0.54390568381871,0.983528546038072,0.827810238914197,5.45872005958493,3.7507739709505,0.163934945376675,9.08895337935743,0.315508219416257,0.780877488593277,0.646270193198397,0.716906393857656,0.668396022247182,0.283076530788832,0,0.292255857911312,0,1.60660658210904,0.709700426041343,0.178065603667255,0.81443479676788,0.989820737835213,1.32745138339963,0.242780636154981,1.51161778482376,0.943025398779491,2.06711325016541,3.07435147943927,0.258428293168221,0.727067458955011,3.20847640546249,0.948110273807448,6.32511651449993,7.21948802737308,8.17055053809091,0.900305470156551,1.03486947026204,0.857348140126369,1.95074257006501,0.713475270408282,1.15184314421485,1.2178597964584,0.23467170806371,0.21183207086382,2.42581237860458,1.15420377059036,1.13025098687134,0.663442174209714,0.238744688006273,1.14898629821543,0.291480836629851,4.45020724825223,0,0,0.370389054739423,0.565105371014073,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,0.690999869022119,0.954670618015114,0.316335993581135,0.813277868507395,0.432021363287205,0.209088296014469,0.436725127492355,0.674321731924103,0.909188012978695,0.26175594198403,0.90730481304255,0.621339313086926,0,0.299033092087958,0.330916980914195,1.36115831840833,1.29159823477731,1.01373675294467,2.11243029562357,0.2604087696879,1.57289016638566,0.483168241652012,1.15212002503146,0.632022241256357,1.01362607645082,0.821687657318618,0.389762468933385,0.716106782669926,0.993406773906324,0.360586348559907,1.32920574457119,0.201932899896295,0.381034033274999,0.403304740547362,0.292373642219257,0.192423683280659,0.584384510907845,3.40095575422817,0.443971906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| |phase1_expression=2.7225304007815,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0.684802919724823,0.262261207256992,0,0.202475267389826,0.699561878128147,0.630924330716475,0.137114433605739,0.42438965179803,3.31668831589172,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,0,0.430942465371778,0.570070258369122,0,0,0,0,0,0,0,0.204169356262369,0.837063261473815,1.5626706890476,1.0470474879476,0,0,0,2.01434908760924,2.43304634926835,0.734187008646726,0,0,1.75748946187577,1.94429899074283,0,0,0.335565212115473,0,0.336093799142464,0.257259436035947,0,0,2.42779753031517,2.11596391708813,0.633831403506179,0.338844532069132,0,0,0,0,0.898800331555214,3.07374644257244,0.518448061542388,0.405017814995072,0.210324961351382,1.71390590642282,3.53389665522582,0.367472397644862,0.383381884072945,0,6.60695285996332,3.57524546638526,3.37934373163736,0.791317726381163,1.09785172322892,2.6045668527838,6.14202597803038,7.87867654044352,3.81995619442025,2.06240009831567,1.99320353118744,2.60959224155421,0.454357159999104,0.302286240427142,1.15945795480671,4.30211938490693,0.679971333707751,3.77792234146472,2.59910566979068,2.68816132258401,5.33688796500657,1.1930122580464,0,0.70667914902068,1.54927761754349,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,3.19714863213368,0.776813650941515,3.11728492036132,0.867426633830679,0.608930956624282,0.230615497256059,1.50722640552623,0.823120949949934,1.88499886994513,0.247194967734374,1.87979163995885,0,1.7794353494215,1.32504911076236,1.45462575940567,0,4.9772735491963,7.33063473847093,0.510914110417183,0.11981512450592,0.599902730993408,0.254140454146129,5.24267237916879,2.74500361691176,0.628271760564322,3.12883776346098,2.30143911597297,4.36354893575076,2.59586020908412,0.712875546952214,1.8661045591514,1.51633655060205,2.52530227063769,1.04096354370163,1.60931473103431,1.0803727788321,1.50704817835715,0.680364991513279,2.17793324484245,2.15513966487376,4.39795730256327,0.646703978798527,0.945530400839096,0.879755620819744,0.876782929710299,0.834141747676794,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0.568326998791185,0.414251545071004,0.469052119962192,0.540186184383045,0.710234206755631,0.590292695242212,0.771335564436891,0.697601834251224,0.536546802799238,0.350296027101508,0.822799249567402,0.164167464079095,1.62137619091711,2.77779976108131,2.63460138349261,2.68412837520744,3.57492912559016,1.02904612379284,0,0.264450566663544,0.426576501070468,0.464473343720877,0.902072229254653,0.605050573870028,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0.502670417600539,0.994782360205754,0.19496408711912,0.898819408654221,0,0.597423819763102,0.569003702859245,0.571242563048644,0,1.01825663922657,1.16371492300575,0.420814919341911,1.7706230394792,4.57591458736767,6.27994911365499,7.77402132707343,4.15033677922008,0.166845105716094,0.982794975566015,0.899448449539415,0.202860121388503,0.241177159752417,0.763877555344259,0.575392274901621,0.486405680325106,0.823684239564244,2.87536413054709,2.23284568601102,1.87222603868736,3.53610429125956,5.02312757861354,4.3419916922703,1.47802552133284,0.189491411770485,0.488894929326078,0.848725428875941,0.704070744865506,0.837531287209079,0.952174563544055,0.195133647857799,0.945810864637146,0,0.318909537314974,0.983179888294428,1.38147985492716,1.01254341007058,1.50791283939272,0.54390568381871,0.983528546038072,0.827810238914197,5.45872005958493,3.7507739709505,0.163934945376675,9.08895337935743,0.315508219416257,0.780877488593277,0.646270193198397,0.716906393857656,0.668396022247182,0.283076530788832,0,0.292255857911312,0,1.60660658210904,0.709700426041343,0.178065603667255,0.81443479676788,0.989820737835213,1.32745138339963,0.242780636154981,1.51161778482376,0.943025398779491,2.06711325016541,3.07435147943927,0.258428293168221,0.727067458955011,3.20847640546249,0.948110273807448,6.32511651449993,7.21948802737308,8.17055053809091,0.900305470156551,1.03486947026204,0.857348140126369,1.95074257006501,0.713475270408282,1.15184314421485,1.2178597964584,0.23467170806371,0.21183207086382,2.42581237860458,1.15420377059036,1.13025098687134,0.663442174209714,0.238744688006273,1.14898629821543,0.291480836629851,4.45020724825223,0,0,0.370389054739423,0.565105371014073,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,0.690999869022119,0.954670618015114,0.316335993581135,0.813277868507395,0.432021363287205,0.209088296014469,0.436725127492355,0.674321731924103,0.909188012978695,0.26175594198403,0.90730481304255,0.621339313086926,0,0.299033092087958,0.330916980914195,1.36115831840833,1.29159823477731,1.01373675294467,2.11243029562357,0.2604087696879,1.57289016638566,0.483168241652012,1.15212002503146,0.632022241256357,1.01362607645082,0.821687657318618,0.389762468933385,0.716106782669926,0.993406773906324,0.360586348559907,1.32920574457119,0.201932899896295,0.381034033274999,0.403304740547362,0.292373642219257,0.192423683280659,0.584384510907845,3.40095575422817,0.443971906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| ||
|short_description=p3@Dnajc12 | |||
}} | }} |
Latest revision as of 04:54, 26 September 2015
Short description: | p3@Dnajc12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dnajc12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000043317, ENSMUST00000136832, NM_013888, uc007fkg.2_5end |
EntrezGene: | Dnajc12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.53e-13 | 54 |
neurectoderm | 1.96e-13 | 64 |
neural plate | 1.96e-13 | 64 |
presumptive neural plate | 1.96e-13 | 64 |
ecto-epithelium | 3.37e-13 | 73 |
neural tube | 3.03e-12 | 52 |
neural rod | 3.03e-12 | 52 |
future spinal cord | 3.03e-12 | 52 |
neural keel | 3.03e-12 | 52 |
ectoderm-derived structure | 3.46e-12 | 95 |
ectoderm | 3.46e-12 | 95 |
presumptive ectoderm | 3.46e-12 | 95 |
structure with developmental contribution from neural crest | 3.88e-11 | 92 |
central nervous system | 6.29e-11 | 73 |
anatomical conduit | 9.78e-11 | 122 |
nervous system | 3.12e-10 | 75 |
pre-chordal neural plate | 4.21e-10 | 49 |
brain | 1.14e-09 | 47 |
future brain | 1.14e-09 | 47 |
tube | 1.68e-09 | 114 |
regional part of brain | 2.41e-09 | 46 |
gray matter | 6.88e-08 | 34 |
anterior neural tube | 1.01e-07 | 40 |
regional part of forebrain | 4.03e-07 | 39 |
forebrain | 4.03e-07 | 39 |
future forebrain | 4.03e-07 | 39 |