FFCP PHASE1:Mm9::chr5:77380652..77380663,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:77380652..77380663,+ to FFCP PHASE1:Mm9::chr5:77380652..77380663,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67054 | |EntrezGene=67054 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D6RCU8 | |UniProt=D6RCU8 | ||
|association_with_transcript=-138bp_to_ENSMUST00000153648_5end | |||
|cluster_id=chr5:77380652..77380663,+ | |||
|description=CAGE_peak_4_at_Paics_5end | |||
|id=chr5:77380652..77380663,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.65e-14,92;UBERON:0000025,1.53e-12,114;UBERON:0004111,1.56e-12,122;UBERON:0000073,4.75e-12,54;UBERON:0001049,6.60e-12,52;UBERON:0005068,6.60e-12,52;UBERON:0006241,6.60e-12,52;UBERON:0007135,6.60e-12,52;UBERON:0002346,8.66e-11,64;UBERON:0003075,8.66e-11,64;UBERON:0007284,8.66e-11,64;UBERON:0002020,9.48e-10,34;UBERON:0002616,1.97e-09,46;UBERON:0000955,2.45e-09,47;UBERON:0006238,2.45e-09,47;UBERON:0003056,2.97e-09,49;UBERON:0010371,1.20e-08,73;UBERON:0003080,1.43e-08,40;UBERON:0001016,4.90e-08,75;UBERON:0002780,5.22e-08,39;UBERON:0001890,5.22e-08,39;UBERON:0006240,5.22e-08,39;UBERON:0001017,6.25e-08,73;UBERON:0003528,7.27e-08,29;UBERON:0002791,7.27e-08,29;UBERON:0001893,7.27e-08,29;UBERON:0004121,8.33e-08,95;UBERON:0000924,8.33e-08,95;UBERON:0006601,8.33e-08,95 | |||
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| ||
|short_description=p4@Paics | |||
}} | }} |
Latest revision as of 05:44, 26 September 2015
Short description: | p4@Paics |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Paics_5end |
Coexpression cluster: | NA |
Association with transcript: | -138bp_to_ENSMUST00000153648_5end |
EntrezGene: | Paics |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.65e-14 | 92 |
tube | 1.53e-12 | 114 |
anatomical conduit | 1.56e-12 | 122 |
regional part of nervous system | 4.75e-12 | 54 |
neural tube | 6.60e-12 | 52 |
neural rod | 6.60e-12 | 52 |
future spinal cord | 6.60e-12 | 52 |
neural keel | 6.60e-12 | 52 |
neurectoderm | 8.66e-11 | 64 |
neural plate | 8.66e-11 | 64 |
presumptive neural plate | 8.66e-11 | 64 |
gray matter | 9.48e-10 | 34 |
regional part of brain | 1.97e-09 | 46 |
brain | 2.45e-09 | 47 |
future brain | 2.45e-09 | 47 |
pre-chordal neural plate | 2.97e-09 | 49 |
ecto-epithelium | 1.20e-08 | 73 |
anterior neural tube | 1.43e-08 | 40 |
nervous system | 4.90e-08 | 75 |
regional part of forebrain | 5.22e-08 | 39 |
forebrain | 5.22e-08 | 39 |
future forebrain | 5.22e-08 | 39 |
central nervous system | 6.25e-08 | 73 |
brain grey matter | 7.27e-08 | 29 |
regional part of telencephalon | 7.27e-08 | 29 |
telencephalon | 7.27e-08 | 29 |
ectoderm-derived structure | 8.33e-08 | 95 |
ectoderm | 8.33e-08 | 95 |
presumptive ectoderm | 8.33e-08 | 95 |