FFCP PHASE1:Mm9::chr9:114549293..114549336,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78893 | |EntrezGene=78893 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=463 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BH15 | |UniProt=Q8BH15 | ||
|association_with_transcript=0bp_to_NM_153585,uc009rxq.2,uc009rxr.2,uc009rxs.2,uc009rxu.2,uc009rxv.2,uc009rxw.2,uc012hcc.1_5end | |association_with_transcript=0bp_to_NM_153585,uc009rxq.2,uc009rxr.2,uc009rxs.2,uc009rxu.2,uc009rxv.2,uc009rxw.2,uc012hcc.1_5end | ||
|cluster_id=chr9:114549293..114549336,- | |||
|description=CAGE_peak_2_at_Cnot10_5end | |description=CAGE_peak_2_at_Cnot10_5end | ||
|id=chr9:114549293..114549336,- | |id=chr9:114549293..114549336,- | ||
|ontology_enrichment_celltype=CL:0000117!7.30e-12!23;CL:0000337!7.30e-12!23;CL:0000540!9.42e-08!33;CL:0000047!9.42e-08!33;CL:0000031!9.42e-08!33;CL:0000404!9.42e-08!33 | |ontology_enrichment_celltype=CL:0000117!7.30e-12!23;CL:0000337!7.30e-12!23;CL:0000540!9.42e-08!33;CL:0000047!9.42e-08!33;CL:0000031!9.42e-08!33;CL:0000404!9.42e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.28e-12,23;CL:0000337,7.28e-12,23;CL:0000540,9.40e-08,33;CL:0000047,9.40e-08,33;CL:0000031,9.40e-08,33;CL:0000404,9.40e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.71e-20!63;UBERON:0003056!2.44e-18!49;UBERON:0002346!8.54e-18!71;UBERON:0003075!8.54e-18!71;UBERON:0007284!8.54e-18!71;UBERON:0001049!3.37e-17!52;UBERON:0005068!3.37e-17!52;UBERON:0006241!3.37e-17!52;UBERON:0007135!3.37e-17!52;UBERON:0000955!2.64e-16!50;UBERON:0006238!2.64e-16!50;UBERON:0002616!1.09e-15!49;UBERON:0004121!3.72e-15!102;UBERON:0000924!3.72e-15!102;UBERON:0006601!3.72e-15!102;UBERON:0001017!1.31e-14!73;UBERON:0005743!1.31e-14!73;UBERON:0003080!3.54e-14!40;UBERON:0000073!1.26e-13!75;UBERON:0001016!1.26e-13!75;UBERON:0002780!1.58e-13!39;UBERON:0001890!1.58e-13!39;UBERON:0006240!1.58e-13!39;UBERON:0000153!9.45e-13!94;UBERON:0007811!1.59e-12!86;UBERON:0002020!2.63e-12!34;UBERON:0002791!5.82e-10!29;UBERON:0003528!5.82e-10!29;UBERON:0001893!5.82e-10!29;UBERON:0000922!7.09e-09!328;UBERON:0000468!7.64e-09!333;UBERON:0000991!5.30e-07!18;UBERON:0005564!5.30e-07!18;UBERON:0000475!6.08e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.49e-19,64;UBERON:0003075,2.49e-19,64;UBERON:0007284,2.49e-19,64;UBERON:0003056,2.42e-18,49;UBERON:0000073,3.25e-18,54;UBERON:0010371,2.42e-17,73;UBERON:0001049,3.36e-17,52;UBERON:0005068,3.36e-17,52;UBERON:0006241,3.36e-17,52;UBERON:0007135,3.36e-17,52;UBERON:0004121,6.21e-16,95;UBERON:0000924,6.21e-16,95;UBERON:0006601,6.21e-16,95;UBERON:0000955,5.68e-15,47;UBERON:0006238,5.68e-15,47;UBERON:0001017,1.30e-14,73;UBERON:0002616,2.29e-14,46;UBERON:0003080,3.53e-14,40;UBERON:0001016,1.25e-13,75;UBERON:0002780,1.58e-13,39;UBERON:0001890,1.58e-13,39;UBERON:0006240,1.58e-13,39;UBERON:0002020,2.62e-12,34;UBERON:0010314,1.03e-10,92;UBERON:0003528,5.81e-10,29;UBERON:0002791,5.81e-10,29;UBERON:0001893,5.81e-10,29;UBERON:0000922,2.73e-08,320;UBERON:0000991,5.29e-07,18;UBERON:0005564,5.29e-07,18 | |||
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| ||
|short_description=p2@Cnot10 | |short_description=p2@Cnot10 | ||
}} | }} |
Latest revision as of 07:02, 26 September 2015
Short description: | p2@Cnot10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cnot10_5end |
Coexpression cluster: | MCL_coexpression_mm9:463 |
Association with transcript: | 0bp_to_NM_153585, uc009rxq.2, uc009rxr.2, uc009rxs.2, uc009rxu.2, uc009rxv.2, uc009rxw.2, uc012hcc.1_5end |
EntrezGene: | Cnot10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.28e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.28e-12 | 23 |
neuron | 9.40e-08 | 33 |
neuronal stem cell | 9.40e-08 | 33 |
neuroblast | 9.40e-08 | 33 |
electrically signaling cell | 9.40e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.49e-19 | 64 |
neural plate | 2.49e-19 | 64 |
presumptive neural plate | 2.49e-19 | 64 |
pre-chordal neural plate | 2.42e-18 | 49 |
regional part of nervous system | 3.25e-18 | 54 |
ecto-epithelium | 2.42e-17 | 73 |
neural tube | 3.36e-17 | 52 |
neural rod | 3.36e-17 | 52 |
future spinal cord | 3.36e-17 | 52 |
neural keel | 3.36e-17 | 52 |
ectoderm-derived structure | 6.21e-16 | 95 |
ectoderm | 6.21e-16 | 95 |
presumptive ectoderm | 6.21e-16 | 95 |
brain | 5.68e-15 | 47 |
future brain | 5.68e-15 | 47 |
central nervous system | 1.30e-14 | 73 |
regional part of brain | 2.29e-14 | 46 |
anterior neural tube | 3.53e-14 | 40 |
nervous system | 1.25e-13 | 75 |
regional part of forebrain | 1.58e-13 | 39 |
forebrain | 1.58e-13 | 39 |
future forebrain | 1.58e-13 | 39 |
gray matter | 2.62e-12 | 34 |
structure with developmental contribution from neural crest | 1.03e-10 | 92 |
brain grey matter | 5.81e-10 | 29 |
regional part of telencephalon | 5.81e-10 | 29 |
telencephalon | 5.81e-10 | 29 |
embryo | 2.73e-08 | 320 |
gonad | 5.29e-07 | 18 |
gonad primordium | 5.29e-07 | 18 |