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FFCP PHASE1:Mm9::chr2:180922214..180922300,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66496
|EntrezGene=66496
|HGNC=
|HGNC=
|MCL_coexpression_id=1773
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000138800_5end
|association_with_transcript=0bp_to_ENSMUST00000138800_5end
|cluster_id=chr2:180922214..180922300,+
|description=CAGE_peak_2_at_Ppdpf_5end
|description=CAGE_peak_2_at_Ppdpf_5end
|id=chr2:180922214..180922300,+
|id=chr2:180922214..180922300,+
|ontology_enrichment_celltype=CL:0000221!2.69e-22!44;CL:0000133!2.69e-22!44;CL:0002319!1.51e-21!43;CL:0000540!1.60e-17!33;CL:0000047!1.60e-17!33;CL:0000031!1.60e-17!33;CL:0000404!1.60e-17!33;CL:0000055!2.95e-16!50;CL:0000393!7.62e-13!39;CL:0000211!7.62e-13!39;CL:0000117!1.33e-12!23;CL:0000337!1.33e-12!23;CL:0002321!1.63e-09!70;CL:0000220!1.63e-09!70
|ontology_enrichment_celltype_v019_2=CL:0000221,2.65e-22,44;CL:0000133,2.65e-22,44;CL:0002319,1.49e-21,43;CL:0000540,1.58e-17,33;CL:0000047,1.58e-17,33;CL:0000031,1.58e-17,33;CL:0000404,1.58e-17,33;CL:0000393,7.56e-13,39;CL:0000211,7.56e-13,39;CL:0000117,1.32e-12,23;CL:0000337,1.32e-12,23;CL:0002321,1.61e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.42e-27!75;UBERON:0001016!1.42e-27!75;UBERON:0004121!3.95e-27!102;UBERON:0000924!3.95e-27!102;UBERON:0006601!3.95e-27!102;UBERON:0001017!2.42e-26!73;UBERON:0005743!2.42e-26!73;UBERON:0002346!1.53e-18!71;UBERON:0003075!1.53e-18!71;UBERON:0007284!1.53e-18!71;UBERON:0000033!4.81e-18!63;UBERON:0001049!7.37e-16!52;UBERON:0005068!7.37e-16!52;UBERON:0006241!7.37e-16!52;UBERON:0007135!7.37e-16!52;UBERON:0003056!1.96e-15!49;UBERON:0000955!4.43e-14!50;UBERON:0006238!4.43e-14!50;UBERON:0002616!7.98e-14!49;UBERON:0003080!2.77e-11!40;UBERON:0002780!4.34e-11!39;UBERON:0001890!4.34e-11!39;UBERON:0006240!4.34e-11!39;UBERON:0002020!2.49e-10!34;UBERON:0000153!2.17e-09!94;UBERON:0007811!3.78e-09!86;UBERON:0002791!5.83e-08!29;UBERON:0003528!5.83e-08!29;UBERON:0001893!5.83e-08!29;UBERON:0005085!4.13e-07!13;UBERON:0000010!8.26e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.65e-30,95;UBERON:0000924,1.65e-30,95;UBERON:0006601,1.65e-30,95;UBERON:0001016,1.40e-27,75;UBERON:0001017,2.39e-26,73;UBERON:0002346,4.57e-22,64;UBERON:0003075,4.57e-22,64;UBERON:0007284,4.57e-22,64;UBERON:0010371,5.69e-22,73;UBERON:0000073,2.02e-16,54;UBERON:0001049,7.31e-16,52;UBERON:0005068,7.31e-16,52;UBERON:0006241,7.31e-16,52;UBERON:0007135,7.31e-16,52;UBERON:0003056,1.95e-15,49;UBERON:0010314,1.34e-14,92;UBERON:0000955,4.07e-13,47;UBERON:0006238,4.07e-13,47;UBERON:0002616,7.26e-13,46;UBERON:0003080,2.76e-11,40;UBERON:0002780,4.31e-11,39;UBERON:0001890,4.31e-11,39;UBERON:0006240,4.31e-11,39;UBERON:0002020,2.48e-10,34;UBERON:0003528,5.80e-08,29;UBERON:0002791,5.80e-08,29;UBERON:0001893,5.80e-08,29;UBERON:0005085,4.12e-07,13;UBERON:0000010,8.24e-07,11
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69293868419,9.27002585472668,10.7548018797113,6.02798683866548,6.58715099736429,4.89972763923257,9.85800804624333,5.4685841634459,5.45268591013696,1.20792060413003,0,4.4241556887945,13.7853146397312,9.65482997349376,5.3267537420896,4.29664069601955,2.98022032171897,3.846254384639,2.65841148914239,1.9183625490148,3.42930629947499,2.01652370273681,1.55932609183604,1.53938946624527,2.57129184799452,1.58711268530648,1.77588762699252,1.88399098879899,2.01461539636894,2.12508553435409,1.68914227906064,5.49454872801795,3.21552568618599,1.00314420807073,11.8597886949584,17.9526842237799,19.4784474569395,12.7171354934329,8.22099023724771,6.7985450765073,9.45031500324528,3.15224842256954,5.89085131679466,3.62432218226274,32.6930144890156,35.9122386060928,19.122163844463,12.398442570483,17.8171188233785,8.27295788025063,6.66740183404846,8.65347240403356,7.06022261101994,7.58091635291392,7.60437899670719,8.11093267960128,6.46126401542189,6.85069130732101,6.4902079919843,7.62069906052918,7.3007125345259,3.47236596834669,4.94503080963968,8.24313952752625,6.51451579532289,6.38912902173615,6.67621331852499,7.1219744149841,8.37573485696442,4.14611578669215,7.3171189149109,4.99832451731901,6.11118512306378,6.17256498823512,9.72807148618228,7.78185410766951,6.54769669071503,5.42278944150881,5.98010494041538,12.4905288968973,3.50897412668113,5.58664740525576,3.06061331310149,6.17655973534643,3.94175320554716
|phase1_expression=15.0539916278506,2.79180326111489,1.81999695755814,0.60492842261366,1.00179145989269,5.54001597309236,7.47560449905682,2.7115897922731,4.36445038670167,5.85161315804984,2.05461561870606,2.23362045186942,1.19840510951844,2.71003247498892,0.666219523631325,1.21485160433896,1.39912375625629,3.47008381894061,4.66189074259512,4.2438965179803,2.38121212422995,5.26242041364692,5.22399578277871,5.59973479776923,4.81759490241057,6.31655160526522,3.4460959692726,6.24866574789078,3.42042155021473,1.76421090831952,5.09980174507201,0,1.23012957516914,0,2.3108129580102,5.31950865147176,2.45003227514843,0,0,0,0.588231488031014,0,0.485510353031154,1.6366586336825,1.11514624341466,2.75320128242522,11.7358701652206,23.1106665763273,15.5977189741475,17.4986909166855,8.11921245427103,14.3752564364972,3.52343472721246,0.725362142011344,2.35265659399725,6.17422646486273,3.15186783932632,4.12537673821954,44.7119378499711,41.2612963832186,40.5652098243955,4.74382344896785,6.22506357277798,1.3498495759221,0.988866362566974,0.7104801149461,25.7656095045828,57.6327457982332,22.9154043201736,22.0059679480656,25.86997024622,45.132855535801,41.9650227808066,35.7673133707666,32.8749965592551,24.8189072384706,16.5173821499083,15.3224805702225,13.9781945263182,58.9531706153967,48.4884511092771,44.7985498678814,17.588528937087,16.3201156909187,15.279824777681,18.2669722993674,18.5083185038834,26.2823218613674,31.1234654599386,22.5958964719289,7.8263411949453,3.44169550792555,4.0798280022465,4.85732872474035,1.29955283489534,3.58421509677868,3.5111105032938,1.53387290320252,2.33807404142582,1.7666978725517,52.3937521569251,1.28326477414318,5.09610479413291,0,6.061749148314,7.60079596425296,6.0662933401774,1.59857431606684,2.58937883647172,0.742210695324124,9.54169297213747,5.48037860961854,4.15107895060905,2.86373017049983,4.23319345688537,1.25666591329675,4.6967043869531,0.433798070759735,0,3.07357014900077,1.10420759230197,1.93950101254089,1.86391761218122,7.31951992528868,8.3778682725382,3.0654846625031,3.35482348616577,1.79970819298022,1.65191295194984,11.0845073159569,9.60751265919116,13.3193613239636,5.38855392596057,6.39288643325826,11.8439185398949,13.7905073607594,6.21220119486929,2.36373244159177,4.29628689337247,7.99679052368601,31.4891471969743,38.39365144039,40.6940413360089,22.3043130396858,29.6639136299789,27.0319949801033,23.2380276908127,14.7460921321239,22.8502072508813,24.2055782614809,14.0760899331159,10.9597866213787,4.72680323683516,3.83077383174383,3.08673204611915,12.1410902759281,0.702213187313235,0.772043721344145,1.70498099637356,10.9776659443816,12.8989332989603,9.7233513188948,10.8902578369197,6.49321964766433,5.24508183817086,3.25547522650571,4.82892122519315,3.97002164048376,4.11399624783701,4.59668899421467,2.67527071501324,2.19299981137998,1.53685080703735,1.34206418760372,7.57043814830858,17.3908794920991,0,8.46241813323342,21.3288250535234,15.7920936865098,12.371276286921,11.4959609035305,11.1189021922435,6.27744566171445,1.89811624617805,6.91735609840846,2.5133520880027,5.96869416123452,4.48417400373976,3.59527763461689,2.37751854862164,1.7922714592893,29.3985246477277,11.3106027483632,19.1603150644237,10.997171703647,10.4734343070518,6.45249542990931,5.05892296994058,2.65698266363284,2.35498091762062,1.60416313098341,1.77871576252289,4.50481785433454,3.14494392181125,3.59779379815766,1.82574109249653,3.61765739628625,4.07401362850272,3.16465751195892,1.62135226775035,4.3929826110093,1.43768206527355,4.09355042435354,4.68056509671841,2.27320990152401,3.94674309748207,2.8946611281802,2.58654466233247,20.6545638829828,14.8298128562244,12.7308814331391,13.8467246490216,7.20276906999808,4.99891645860629,5.26860849216057,7.09358148477859,4.4292937929755,7.97273843287435,1.96635977658886,1.72684981865896,2.4590339958857,0,0,20.6540994667995,21.5230662117691,15.412856638828,23.3251256318484,2.95082901678016,0.504941854408746,30.2887890639606,27.7211508450613,23.0503035574095,28.6762557543062,31.1918143715352,29.1568826712497,24.2886421004937,18.4121190484126,19.3691011193797,12.5315313404505,4.11626247103979,10.1497394090335,6.67836533349662,4.94910368917606,1.32745138339963,25.2491861601181,24.4882081141448,10.7504895460862,7.67784921490009,6.7635732547664,7.23599220871019,8.72480950746013,7.48644494607915,1.26414703174326,2.10837217149998,2.06271086496374,4.08527526904546,28.0895306688844,31.4341601592093,30.0071849044229,22.5222096725687,19.4422011186257,17.9358432456312,18.8768268451052,3.75474732901937,5.08396970073168,1.98475558249466,4.9465875882444,3.06782410722221,4.22190474497091,5.37175548014114,3.77524069413641,3.20628920292836,20.9530591271876,0.512612642393558,4.74689796315412,1.66675074632741,1.13021074202815,1.6403307326523,1.37266903923914,6.4591803397665,6.57771825921193,7.18639863783004,9.54670618015114,30.0519193902079,12.6058069618646,7.88438987999149,9.40897332065109,7.20596460362386,8.22672512947406,6.61227645802687,4.71160695571253,2.46268449254406,3.72803587852155,0.56369293868419,9.27002585472668,10.7548018797113,6.02798683866548,6.58715099736429,4.89972763923257,9.85800804624333,5.4685841634459,5.45268591013696,1.20792060413003,0,4.4241556887945,13.7853146397312,9.65482997349376,5.3267537420896,4.29664069601955,2.98022032171897,3.846254384639,2.65841148914239,1.9183625490148,3.42930629947499,2.01652370273681,1.55932609183604,1.53938946624527,2.57129184799452,1.58711268530648,1.77588762699252,1.88399098879899,2.01461539636894,2.12508553435409,1.68914227906064,5.49454872801795,3.21552568618599,1.00314420807073,11.8597886949584,17.9526842237799,19.4784474569395,12.7171354934329,8.22099023724771,6.7985450765073,9.45031500324528,3.15224842256954,5.89085131679466,3.62432218226274,32.6930144890156,35.9122386060928,19.122163844463,12.398442570483,17.8171188233785,8.27295788025063,6.66740183404846,8.65347240403356,7.06022261101994,7.58091635291392,7.60437899670719,8.11093267960128,6.46126401542189,6.85069130732101,6.4902079919843,7.62069906052918,7.3007125345259,3.47236596834669,4.94503080963968,8.24313952752625,6.51451579532289,6.38912902173615,6.67621331852499,7.1219744149841,8.37573485696442,4.14611578669215,7.3171189149109,4.99832451731901,6.11118512306378,6.17256498823512,9.72807148618228,7.78185410766951,6.54769669071503,5.42278944150881,5.98010494041538,12.4905288968973,3.50897412668113,5.58664740525576,3.06061331310149,6.17655973534643,3.94175320554716
|short_description=p2@Ppdpf
|short_description=p2@Ppdpf
}}
}}

Latest revision as of 08:00, 26 September 2015

Short description:p2@Ppdpf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ppdpf_5end
Coexpression cluster:MCL_coexpression_mm9:1773
Association with transcript: 0bp_to_ENSMUST00000138800_5end
EntrezGene:Ppdpf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ppdpf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.66
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I26.25
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C223.11
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.60
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C344.71
Mouse Granule cells, donor2.CNhs12357.11731-123E341.26
Mouse Granule cells, donor3.CNhs12108.11636-122C740.57
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C825.77
Mouse Microglia, donor2.CNhs12634.11736-123E857.63
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.92
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.01
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.87
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D541.97
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D235.77
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F232.87
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D624.82
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D458.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F448.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D844.80
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.59
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E126.28
Mouse Schwann, donor1.CNhs12507.11728-123D931.12
Mouse Schwann, donor2.CNhs12573.11746-123F922.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G652.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C59.54
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C14.23
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I28.38
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A411.08
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F113.32
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F211.84
diencephalon, neonate N30.CNhs11201.1388-42B213.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G48.00
eyeball, embryo E12.CNhs11016.345-16C631.49
eyeball, embryo E14.CNhs10521.399-16E238.39
eyeball, embryo E15.CNhs10593.426-16C940.69
eyeball, embryo E17.CNhs11023.1261-18D422.30
eyeball, neonate N00.CNhs11207.633-15C629.66
eyeball, neonate N01.CNhs11140.1532-43E727.03
eyeball, neonate N02.CNhs11205.1551-44G823.24
eyeball, neonate N16.CNhs11188.777-19A214.75
forelimb, embryo E11.CNhs10596.335-25E222.85
forelimb, embryo E12.CNhs10600.359-14H224.21
forelimb, embryo E13.CNhs10589.384-1E214.08
forelimb, embryo E14.CNhs10577.413-26A810.96
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I612.14
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E910.98
heart, embryo E12.CNhs11015.353-12F512.90
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D410.89
heart, embryo E15.CNhs11017.431-16C86.49
heart, embryo E16.CNhs11021.457-17C65.25
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G14.60
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E87.57
hippocampus, neonate N00.CNhs11228.627-43G117.39
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A38.46
intestine, embryo E12.CNhs11019.1251-16I521.33
intestine, embryo E13.CNhs11010.381-16D515.79
intestine, embryo E15.CNhs10602.976-16D812.37
intestine, embryo E16.CNhs10585.463-22H411.50
intestine, embryo E17.CNhs10582.482-18D311.12
intestine, embryo E18.CNhs10526.1289-20F76.28
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E96.92
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F25.97
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I929.40
kidney, embryo E15.CNhs10997.434-16F811.31
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I211.00
kidney, embryo E18.CNhs11001.1288-20C710.47
kidney, neonate N00.CNhs11214.646-21G76.45
kidney, neonate N10.CNhs11206.758-6D55.06
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G220.65
lung, embryo E14.CNhs10604.404-26F814.83
lung, embryo E15.CNhs11020.432-17C512.73
lung, embryo E16.CNhs10998.458-17B613.85
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E57.09
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B620.65
mammary gland, adult pregnant day19.CNhs10476.588-5H221.52
medulla oblongata, adult.CNhs10477.17-12C215.41
medulla oblongata, neonate N30.CNhs11200.1396-42A323.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E130.29
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E227.72
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D728.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D831.19
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D929.16
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.41
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.37
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H710.15
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F425.25
pancreas, embryo E15.CNhs11042.1556-45F224.49
pancreas, embryo E16.CNhs11003.460-26E510.75
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E628.09
pituitary gland, embryo E13.CNhs11009.370-44C731.43
pituitary gland, embryo E14.CNhs11037.398-44A530.01
pituitary gland, embryo E15.CNhs10592.427-16B922.52
pituitary gland, embryo E16.CNhs11036.449-43F619.44
pituitary gland, embryo E17.CNhs11039.1265-44F517.94
pituitary gland, neonate N00.CNhs11190.1308-22E918.88
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C34.95
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H34.22
skin, neonate N06.CNhs11097.693-20I55.37
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C920.95
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.19
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E330.05
stomach, embryo E15.CNhs10603.1252-16G812.61
stomach, embryo E16.CNhs11022.459-17D47.88
stomach, embryo E17.CNhs11006.1035-18D59.41
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B88.23
stomach, neonate N07.CNhs11210.718-18A96.61
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F59.27
testis, embryo E15.CNhs11034.443-27C510.75
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I56.59
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B79.86
testis, neonate N07.CNhs11222.726-26I45.47
testis, neonate N10.CNhs11204.763-44D95.45
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I413.79
thymus, embryo E15.CNhs11005.430-45I29.65
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D33.43
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G22.57
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I832.69
whole body, embryo E12.CNhs10587.857-27C935.91
whole body, embryo E13.CNhs10512.372-23H219.12
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B117.82
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.42
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.65e-2244
neurectodermal cell2.65e-2244
neural cell1.49e-2143
neuron1.58e-1733
neuronal stem cell1.58e-1733
neuroblast1.58e-1733
electrically signaling cell1.58e-1733
electrically responsive cell7.56e-1339
electrically active cell7.56e-1339
CNS neuron (sensu Vertebrata)1.32e-1223
neuroblast (sensu Vertebrata)1.32e-1223
embryonic cell1.61e-0970

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.65e-3095
ectoderm1.65e-3095
presumptive ectoderm1.65e-3095
nervous system1.40e-2775
central nervous system2.39e-2673
neurectoderm4.57e-2264
neural plate4.57e-2264
presumptive neural plate4.57e-2264
ecto-epithelium5.69e-2273
regional part of nervous system2.02e-1654
neural tube7.31e-1652
neural rod7.31e-1652
future spinal cord7.31e-1652
neural keel7.31e-1652
pre-chordal neural plate1.95e-1549
structure with developmental contribution from neural crest1.34e-1492
brain4.07e-1347
future brain4.07e-1347
regional part of brain7.26e-1346
anterior neural tube2.76e-1140
regional part of forebrain4.31e-1139
forebrain4.31e-1139
future forebrain4.31e-1139
gray matter2.48e-1034
brain grey matter5.80e-0829
regional part of telencephalon5.80e-0829
telencephalon5.80e-0829
ectodermal placode4.12e-0713
peripheral nervous system8.24e-0711
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