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FFCP PHASE1:Mm9::chr1:133421888..133421928,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14270
|EntrezGene=14270
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=241bp_to_uc011wrq.1_5end
|association_with_transcript=241bp_to_uc011wrq.1_5end
|cluster_id=chr1:133421888..133421928,-
|description=CAGE_peak_5_at_Srgap2_5end
|description=CAGE_peak_5_at_Srgap2_5end
|id=chr1:133421888..133421928,-
|id=chr1:133421888..133421928,-
|ontology_enrichment_celltype=CL:0000117!3.20e-08!23;CL:0000337!3.20e-08!23;CL:0000540!9.39e-07!33;CL:0000047!9.39e-07!33;CL:0000031!9.39e-07!33;CL:0000404!9.39e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.07e-10,23;CL:0000337,6.07e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.13e-14!75;UBERON:0001016!3.13e-14!75;UBERON:0001017!1.86e-13!73;UBERON:0005743!1.86e-13!73;UBERON:0001049!2.96e-13!52;UBERON:0005068!2.96e-13!52;UBERON:0006241!2.96e-13!52;UBERON:0007135!2.96e-13!52;UBERON:0004121!3.10e-13!102;UBERON:0000924!3.10e-13!102;UBERON:0006601!3.10e-13!102;UBERON:0002020!4.19e-13!34;UBERON:0000955!9.76e-12!50;UBERON:0006238!9.76e-12!50;UBERON:0002616!3.10e-11!49;UBERON:0002791!6.95e-11!29;UBERON:0003528!6.95e-11!29;UBERON:0001893!6.95e-11!29;UBERON:0000033!2.43e-10!63;UBERON:0003080!1.86e-09!40;UBERON:0000468!3.65e-09!333;UBERON:0002780!5.54e-09!39;UBERON:0001890!5.54e-09!39;UBERON:0006240!5.54e-09!39;UBERON:0002346!6.67e-09!71;UBERON:0003075!6.67e-09!71;UBERON:0007284!6.67e-09!71;UBERON:0000956!3.94e-08!21;UBERON:0001869!3.94e-08!21;UBERON:0000203!3.94e-08!21;UBERON:0003056!8.40e-08!49;UBERON:0002619!6.69e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.97e-16,34;UBERON:0000073,1.14e-14,54;UBERON:0001049,1.82e-14,52;UBERON:0005068,1.82e-14,52;UBERON:0006241,1.82e-14,52;UBERON:0007135,1.82e-14,52;UBERON:0001016,3.14e-14,75;UBERON:0003528,1.58e-13,29;UBERON:0002791,1.58e-13,29;UBERON:0001893,1.58e-13,29;UBERON:0001017,2.64e-13,73;UBERON:0004121,3.14e-13,95;UBERON:0000924,3.14e-13,95;UBERON:0006601,3.14e-13,95;UBERON:0010371,3.93e-12,73;UBERON:0000955,7.47e-12,47;UBERON:0006238,7.47e-12,47;UBERON:0002616,3.04e-11,46;UBERON:0000956,2.67e-10,21;UBERON:0001869,2.67e-10,21;UBERON:0000203,2.67e-10,21;UBERON:0003080,3.81e-10,40;UBERON:0002780,1.47e-09,39;UBERON:0001890,1.47e-09,39;UBERON:0006240,1.47e-09,39;UBERON:0002346,1.60e-09,64;UBERON:0003075,1.60e-09,64;UBERON:0007284,1.60e-09,64;UBERON:0002619,1.09e-08,17;UBERON:0002021,1.05e-07,10;UBERON:0000411,1.05e-07,10;UBERON:0001950,1.05e-07,10;UBERON:0003056,7.27e-07,49
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0.404950534779652,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0.7813353445238,0,0,0,0,0.881277725829041,0.506884656097573,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,2.42779753031517,3.1739458756322,1.26766280701236,0.677689064138264,0,0.449949858640699,1.97773272513395,0,0,0.768436610643109,1.76272340924412,2.8351247049655,1.26194976810829,1.14260393761521,4.63823935998388,2.44981598429908,2.87536413054709,1.83843757322004,1.10115880999389,2.42605942361857,1.38245879930619,2.76961204233407,4.39140689291566,7.29278718779464,2.51264699101243,0.56276261003168,1.5279824777681,5.59794312399969,4.27115042397309,2.98239113320481,4.39211921332468,1.73814588245607,1.73918693221007,0,0,0,0,0,0.280888840263504,0,0,0,6.33795388995062,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0.890652834388949,0,0.304465478312141,0.230615497256059,0.301445281105245,1.17588707135705,0.502666365318702,0,1.59059292611903,0.884610551949874,1.29413479957927,1.54589062922275,2.42437626567611,0,8.49064311333487,10.4723353406728,0.255457055208591,0,0,0,3.74476598512057,2.74500361691176,6.28271760564322,4.69325664519146,5.62574006126727,3.1168206683934,3.56930778749067,0.509196819251581,0.622034853050465,0.505445516867349,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0.753524089178575,0.748401490664606,0.768682321709099,0.655912071918102,1.03481348295606,0,0.189106080167819,0.703804496655795,0.657587197282725,1.11218899690239,6.268538997399,7.40815691068596,1.39323986772945,0.702213187313235,0,0.284163499395593,0.207125772535502,1.17263029990548,0.900310307305074,0,0.787056926989615,1.23413690309903,0.930135779001631,0.268273401399619,0.817357396570186,0.822799249567402,1.80584210487005,2.1888578577381,0.730999937126662,2.85415149878366,1.8788898626452,6.30869845692382,8.54108282748061,0,0.264450566663544,0.213288250535234,0.232236671860439,0.77320476793256,0.201683524623343,0.444756087689741,0.570676878337677,0,0.329397909448022,1.00534083520108,0.198956472041151,0.58489226135736,0,0,0.796565093017469,0,0.571242563048644,1.1270773567308,1.22190796707189,0.969762435838129,1.8936671370386,1.83385957660346,1.03327103585722,1.09899109488962,0.246794327843601,0,0,0.393117990226406,0,0.405720242777006,0.482354319504834,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0,0.505157755894224,0.358794827043824,0,0.923765950833023,0,0.162964976442026,0,0.469380496577004,0.335012514883631,0.714130922658041,0.975668239288994,0.630540576424764,0.664394068946325,1.43509291791738,1.14704320301017,0.345369963731791,0.578596234326046,1.50791283939272,1.63171705145613,0,0.551873492609465,2.0871576698413,1.87538698547525,0,0.757412781613119,0.631016438832513,0.390438744296638,0,1.67278158566786,1.11399337041197,2.26461224631066,0.404810701674894,0.584511715822624,0.790575555893047,3.85585579706168,0.851640511249612,0.35613120733451,0.651547837414304,1.15479086080775,1.32745138339963,0.728341908464944,0.604647113929502,1.32023555829129,0.590603785761546,0.922305443831782,2.58428293168221,1.09060118843252,1.78248689192361,0.948110273807448,3.16255825724996,0,0.680879211507576,0.18006109403131,0.258717367565509,0.643011105094777,0.177340233642274,0.535106452806212,0.987294123612726,0.304464949114599,1.17335854031855,0,0.441056796109924,11.5420377059036,14.8547272560233,6.6947346670253,7.5204576721976,11.8181447816444,0.291480836629851,2.96680483216816,0,1.44470807574256,0.555583582109135,0.565105371014073,0,0,0,0,0.138199973804424,1.90934123603023,0.158167996790568,0.406638934253697,0,0.627264888043406,1.52853794622324,4.45052343069908,2.97552440611209,1.30877970992015,0.388844919875379,0.621339313086926,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0.774958940866387,0.844780627453891,1.5256441023948,0.651021924219751,0.838874755405687,0.483168241652012,0.576060012515731,0,0,0.102710957164827,0.51968329191118,0.716106782669926,0.198681354781265,0.120195449519969,0.147689527174577,0.504832249740738,0.15241361331,0.201652370273681,0.38983152295901,0.384847366561318,0,0.680191150845634,0,0.0897138566094757,0,0.965947970160952,1.50145980360946,0.549454872801795,0.428736758158132,0.501572104035363,4.51801474093653,9.20650473014354,3.43737308063638,3.78077001156113,2.05524755931193,3.0215755895588,2.02506750069542,3.15224842256954,3.62513927187364,4.14208249401456,0.31136204275253,1.19707462020309,0.512200817262403,0.729320151204882,1.67690530102386,1.10306105070008,1.77797382241292,2.88449080134452,2.24643446714271,0.758091635291392,1.2673964994512,2.45214243801899,1.77918864192777,1.21647789569252,1.95280594449085,2.85776214769844,2.31768651889711,1.92909220463705,2.88460130562315,2.50238164228475,2.05721551431249,2.12970967391205,2.38436189947321,1.30811774969096,1.88218760830661,1.86152137361688,0.914639864363863,1.31534855718921,2.17286582153379,2.80571135828869,2.49133538060766,2.36410757701352,0.409231043169689,2.94379998253335,2.50778594275484,4.49659040288303,2.8071793013449,3.43793686477277,1.3390183244819,1.54413993383661,2.31867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0.404950534779652,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0.7813353445238,0,0,0,0,0.881277725829041,0.506884656097573,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,2.42779753031517,3.1739458756322,1.26766280701236,0.677689064138264,0,0.449949858640699,1.97773272513395,0,0,0.768436610643109,1.76272340924412,2.8351247049655,1.26194976810829,1.14260393761521,4.63823935998388,2.44981598429908,2.87536413054709,1.83843757322004,1.10115880999389,2.42605942361857,1.38245879930619,2.76961204233407,4.39140689291566,7.29278718779464,2.51264699101243,0.56276261003168,1.5279824777681,5.59794312399969,4.27115042397309,2.98239113320481,4.39211921332468,1.73814588245607,1.73918693221007,0,0,0,0,0,0.280888840263504,0,0,0,6.33795388995062,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0.890652834388949,0,0.304465478312141,0.230615497256059,0.301445281105245,1.17588707135705,0.502666365318702,0,1.59059292611903,0.884610551949874,1.29413479957927,1.54589062922275,2.42437626567611,0,8.49064311333487,10.4723353406728,0.255457055208591,0,0,0,3.74476598512057,2.74500361691176,6.28271760564322,4.69325664519146,5.62574006126727,3.1168206683934,3.56930778749067,0.509196819251581,0.622034853050465,0.505445516867349,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0.753524089178575,0.748401490664606,0.768682321709099,0.655912071918102,1.03481348295606,0,0.189106080167819,0.703804496655795,0.657587197282725,1.11218899690239,6.268538997399,7.40815691068596,1.39323986772945,0.702213187313235,0,0.284163499395593,0.207125772535502,1.17263029990548,0.900310307305074,0,0.787056926989615,1.23413690309903,0.930135779001631,0.268273401399619,0.817357396570186,0.822799249567402,1.80584210487005,2.1888578577381,0.730999937126662,2.85415149878366,1.8788898626452,6.30869845692382,8.54108282748061,0,0.264450566663544,0.213288250535234,0.232236671860439,0.77320476793256,0.201683524623343,0.444756087689741,0.570676878337677,0,0.329397909448022,1.00534083520108,0.198956472041151,0.58489226135736,0,0,0.796565093017469,0,0.571242563048644,1.1270773567308,1.22190796707189,0.969762435838129,1.8936671370386,1.83385957660346,1.03327103585722,1.09899109488962,0.246794327843601,0,0,0.393117990226406,0,0.405720242777006,0.482354319504834,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0,0.505157755894224,0.358794827043824,0,0.923765950833023,0,0.162964976442026,0,0.469380496577004,0.335012514883631,0.714130922658041,0.975668239288994,0.630540576424764,0.664394068946325,1.43509291791738,1.14704320301017,0.345369963731791,0.578596234326046,1.50791283939272,1.63171705145613,0,0.551873492609465,2.0871576698413,1.87538698547525,0,0.757412781613119,0.631016438832513,0.390438744296638,0,1.67278158566786,1.11399337041197,2.26461224631066,0.404810701674894,0.584511715822624,0.790575555893047,3.85585579706168,0.851640511249612,0.35613120733451,0.651547837414304,1.15479086080775,1.32745138339963,0.728341908464944,0.604647113929502,1.32023555829129,0.590603785761546,0.922305443831782,2.58428293168221,1.09060118843252,1.78248689192361,0.948110273807448,3.16255825724996,0,0.680879211507576,0.18006109403131,0.258717367565509,0.643011105094777,0.177340233642274,0.535106452806212,0.987294123612726,0.304464949114599,1.17335854031855,0,0.441056796109924,11.5420377059036,14.8547272560233,6.6947346670253,7.5204576721976,11.8181447816444,0.291480836629851,2.96680483216816,0,1.44470807574256,0.555583582109135,0.565105371014073,0,0,0,0,0.138199973804424,1.90934123603023,0.158167996790568,0.406638934253697,0,0.627264888043406,1.52853794622324,4.45052343069908,2.97552440611209,1.30877970992015,0.388844919875379,0.621339313086926,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0.774958940866387,0.844780627453891,1.5256441023948,0.651021924219751,0.838874755405687,0.483168241652012,0.576060012515731,0,0,0.102710957164827,0.51968329191118,0.716106782669926,0.198681354781265,0.120195449519969,0.147689527174577,0.504832249740738,0.15241361331,0.201652370273681,0.38983152295901,0.384847366561318,0,0.680191150845634,0,0.0897138566094757,0,0.965947970160952,1.50145980360946,0.549454872801795,0.428736758158132,0.501572104035363,4.51801474093653,9.20650473014354,3.43737308063638,3.78077001156113,2.05524755931193,3.0215755895588,2.02506750069542,3.15224842256954,3.62513927187364,4.14208249401456,0.31136204275253,1.19707462020309,0.512200817262403,0.729320151204882,1.67690530102386,1.10306105070008,1.77797382241292,2.88449080134452,2.24643446714271,0.758091635291392,1.2673964994512,2.45214243801899,1.77918864192777,1.21647789569252,1.95280594449085,2.85776214769844,2.31768651889711,1.92909220463705,2.88460130562315,2.50238164228475,2.05721551431249,2.12970967391205,2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|short_description=p5@Srgap2
|short_description=p5@Srgap2
}}
}}

Latest revision as of 08:27, 26 September 2015

Short description:p5@Srgap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Srgap2_5end
Coexpression cluster:NA
Association with transcript: 241bp_to_uc011wrq.1_5end
EntrezGene:Srgap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Srgap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D94.39
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F16.28
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B57.41
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G18.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C311.54
skin, neonate N00.CNhs11124.650-25G414.85
skin, neonate N03.CNhs11215.662-22H36.69
skin, neonate N06.CNhs11097.693-20I57.52
skin, neonate N10.CNhs11108.762-6C411.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A92.98
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.07e-1023
neuroblast (sensu Vertebrata)6.07e-1023

Uber anatomy
Ontology termp-valuen
gray matter1.97e-1634
regional part of nervous system1.14e-1454
neural tube1.82e-1452
neural rod1.82e-1452
future spinal cord1.82e-1452
neural keel1.82e-1452
nervous system3.14e-1475
brain grey matter1.58e-1329
regional part of telencephalon1.58e-1329
telencephalon1.58e-1329
central nervous system2.64e-1373
ectoderm-derived structure3.14e-1395
ectoderm3.14e-1395
presumptive ectoderm3.14e-1395
ecto-epithelium3.93e-1273
brain7.47e-1247
future brain7.47e-1247
regional part of brain3.04e-1146
cerebral cortex2.67e-1021
cerebral hemisphere2.67e-1021
pallium2.67e-1021
anterior neural tube3.81e-1040
regional part of forebrain1.47e-0939
forebrain1.47e-0939
future forebrain1.47e-0939
neurectoderm1.60e-0964
neural plate1.60e-0964
presumptive neural plate1.60e-0964
regional part of cerebral cortex1.09e-0817
occipital lobe1.05e-0710
visual cortex1.05e-0710
neocortex1.05e-0710
pre-chordal neural plate7.27e-0749
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