FFCP PHASE1:Mm9::chr4:132833508..132833589,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:132833508..132833589,- to FFCP PHASE1:Mm9::chr4:132833508..132833589,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=52174 | |EntrezGene=52174 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F6XVJ2,F6ZS99 | |UniProt=F6XVJ2,F6ZS99 | ||
|association_with_transcript=0bp_to_ENSMUST00000134781,ENSMUST00000137622_5end | |||
|cluster_id=chr4:132833508..132833589,- | |||
|description=CAGE_peak_1_at_Tmem222_5end | |||
|id=chr4:132833508..132833589,- | |||
|ontology_enrichment_celltype=CL:0000144!5.75e-13!121;CL:0000012!5.75e-13!121;CL:0002371!7.04e-12!118;CL:0000723!2.48e-11!91;CL:0000048!2.48e-11!91;CL:0000034!5.53e-11!97;CL:0000548!6.40e-11!115;CL:0000004!6.40e-11!115;CL:0000255!6.40e-11!115;CL:0000219!3.60e-08!54;CL:0000117!6.14e-08!23;CL:0000337!6.14e-08!23;CL:0000055!1.29e-07!50;CL:0002319!6.13e-07!43;CL:0000221!8.28e-07!44;CL:0000133!8.28e-07!44;CL:0002320!8.46e-07!46;CL:0000134!8.46e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,2.48e-11,91;CL:0000048,2.48e-11,91;CL:0000034,5.53e-11,97;CL:0000219,3.60e-08,54;CL:0000117,6.14e-08,23;CL:0000337,6.14e-08,23;CL:0002319,6.13e-07,43;CL:0000221,8.28e-07,44;CL:0000133,8.28e-07,44;CL:0002320,8.46e-07,46;CL:0000134,8.46e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.81e-16,54;UBERON:0001017,2.49e-15,73;UBERON:0001016,1.12e-14,75;UBERON:0001049,1.32e-14,52;UBERON:0005068,1.32e-14,52;UBERON:0006241,1.32e-14,52;UBERON:0007135,1.32e-14,52;UBERON:0000955,4.42e-12,47;UBERON:0006238,4.42e-12,47;UBERON:0002616,6.79e-12,46;UBERON:0002346,7.35e-12,64;UBERON:0003075,7.35e-12,64;UBERON:0007284,7.35e-12,64;UBERON:0002020,5.21e-11,34;UBERON:0004121,4.63e-10,95;UBERON:0000924,4.63e-10,95;UBERON:0006601,4.63e-10,95;UBERON:0003080,6.64e-10,40;UBERON:0002780,1.89e-09,39;UBERON:0001890,1.89e-09,39;UBERON:0006240,1.89e-09,39;UBERON:0010371,4.14e-09,73;UBERON:0003528,1.12e-08,29;UBERON:0002791,1.12e-08,29;UBERON:0001893,1.12e-08,29;UBERON:0003056,3.82e-08,49;UBERON:0002384,8.46e-07,46;UBERON:0010314,8.81e-07,92 | |||
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| ||
|short_description=p1@Tmem222 | |||
}} | }} |
Latest revision as of 11:21, 26 September 2015
Short description: | p1@Tmem222 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem222_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000134781, ENSMUST00000137622_5end |
EntrezGene: | Tmem222 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 2.48e-11 | 91 |
multi fate stem cell | 2.48e-11 | 91 |
stem cell | 5.53e-11 | 97 |
motile cell | 3.60e-08 | 54 |
CNS neuron (sensu Vertebrata) | 6.14e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.14e-08 | 23 |
neural cell | 6.13e-07 | 43 |
ectodermal cell | 8.28e-07 | 44 |
neurectodermal cell | 8.28e-07 | 44 |
connective tissue cell | 8.46e-07 | 46 |
mesenchymal cell | 8.46e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.81e-16 | 54 |
central nervous system | 2.49e-15 | 73 |
nervous system | 1.12e-14 | 75 |
neural tube | 1.32e-14 | 52 |
neural rod | 1.32e-14 | 52 |
future spinal cord | 1.32e-14 | 52 |
neural keel | 1.32e-14 | 52 |
brain | 4.42e-12 | 47 |
future brain | 4.42e-12 | 47 |
regional part of brain | 6.79e-12 | 46 |
neurectoderm | 7.35e-12 | 64 |
neural plate | 7.35e-12 | 64 |
presumptive neural plate | 7.35e-12 | 64 |
gray matter | 5.21e-11 | 34 |
ectoderm-derived structure | 4.63e-10 | 95 |
ectoderm | 4.63e-10 | 95 |
presumptive ectoderm | 4.63e-10 | 95 |
anterior neural tube | 6.64e-10 | 40 |
regional part of forebrain | 1.89e-09 | 39 |
forebrain | 1.89e-09 | 39 |
future forebrain | 1.89e-09 | 39 |
ecto-epithelium | 4.14e-09 | 73 |
brain grey matter | 1.12e-08 | 29 |
regional part of telencephalon | 1.12e-08 | 29 |
telencephalon | 1.12e-08 | 29 |
pre-chordal neural plate | 3.82e-08 | 49 |
connective tissue | 8.46e-07 | 46 |
structure with developmental contribution from neural crest | 8.81e-07 | 92 |