FFCP PHASE1:Mm9::chr2:28302351..28302398,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241289 | |EntrezGene=241289 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1187 | |MCL_coexpression_id=1187 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000150362_5end | |association_with_transcript=0bp_to_ENSMUST00000150362_5end | ||
|cluster_id=chr2:28302351..28302398,+ | |||
|description=CAGE_peak_1_at_Ppp1r26_5end | |description=CAGE_peak_1_at_Ppp1r26_5end | ||
|id=chr2:28302351..28302398,+ | |id=chr2:28302351..28302398,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.97e-13!33;CL:0000047!1.97e-13!33;CL:0000031!1.97e-13!33;CL:0000404!1.97e-13!33;CL:0000117!2.92e-12!23;CL:0000337!2.92e-12!23;CL:0000221!9.99e-10!44;CL:0000133!9.99e-10!44;CL:0000393!2.01e-09!39;CL:0000211!2.01e-09!39;CL:0002319!2.21e-09!43 | |ontology_enrichment_celltype=CL:0000540!1.97e-13!33;CL:0000047!1.97e-13!33;CL:0000031!1.97e-13!33;CL:0000404!1.97e-13!33;CL:0000117!2.92e-12!23;CL:0000337!2.92e-12!23;CL:0000221!9.99e-10!44;CL:0000133!9.99e-10!44;CL:0000393!2.01e-09!39;CL:0000211!2.01e-09!39;CL:0002319!2.21e-09!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.44e-14,33;CL:0000047,3.44e-14,33;CL:0000031,3.44e-14,33;CL:0000404,3.44e-14,33;CL:0000117,7.14e-13,23;CL:0000337,7.14e-13,23;CL:0000393,1.35e-09,39;CL:0000211,1.35e-09,39;CL:0000221,1.62e-09,44;CL:0000133,1.62e-09,44;CL:0002319,3.76e-09,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.85e-23,73;UBERON:0002346,3.57e-22,64;UBERON:0003075,3.57e-22,64;UBERON:0007284,3.57e-22,64;UBERON:0001016,9.29e-22,75;UBERON:0004121,2.64e-21,95;UBERON:0000924,2.64e-21,95;UBERON:0006601,2.64e-21,95;UBERON:0010314,1.32e-19,92;UBERON:0000073,1.53e-19,54;UBERON:0001049,1.34e-18,52;UBERON:0005068,1.34e-18,52;UBERON:0006241,1.34e-18,52;UBERON:0007135,1.34e-18,52;UBERON:0010371,1.35e-18,73;UBERON:0003056,4.09e-17,49;UBERON:0000955,2.38e-15,47;UBERON:0006238,2.38e-15,47;UBERON:0002616,1.02e-14,46;UBERON:0003080,2.94e-14,40;UBERON:0002780,1.39e-13,39;UBERON:0001890,1.39e-13,39;UBERON:0006240,1.39e-13,39;UBERON:0002020,1.82e-12,34;UBERON:0003528,3.01e-09,29;UBERON:0002791,3.01e-09,29;UBERON:0001893,3.01e-09,29;UBERON:0000922,1.55e-07,320;UBERON:0004111,3.19e-07,122;UBERON:0000025,8.02e-07,114 | |||
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| ||
|short_description=p1@Ppp1r26 | |short_description=p1@Ppp1r26 | ||
}} | }} |
Latest revision as of 11:56, 26 September 2015
Short description: | p1@Ppp1r26 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ppp1r26_5end |
Coexpression cluster: | MCL_coexpression_mm9:1187 |
Association with transcript: | 0bp_to_ENSMUST00000150362_5end |
EntrezGene: | Ppp1r26 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.44e-14 | 33 |
neuronal stem cell | 3.44e-14 | 33 |
neuroblast | 3.44e-14 | 33 |
electrically signaling cell | 3.44e-14 | 33 |
CNS neuron (sensu Vertebrata) | 7.14e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.14e-13 | 23 |
electrically responsive cell | 1.35e-09 | 39 |
electrically active cell | 1.35e-09 | 39 |
ectodermal cell | 1.62e-09 | 44 |
neurectodermal cell | 1.62e-09 | 44 |
neural cell | 3.76e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.85e-23 | 73 |
neurectoderm | 3.57e-22 | 64 |
neural plate | 3.57e-22 | 64 |
presumptive neural plate | 3.57e-22 | 64 |
nervous system | 9.29e-22 | 75 |
ectoderm-derived structure | 2.64e-21 | 95 |
ectoderm | 2.64e-21 | 95 |
presumptive ectoderm | 2.64e-21 | 95 |
structure with developmental contribution from neural crest | 1.32e-19 | 92 |
regional part of nervous system | 1.53e-19 | 54 |
neural tube | 1.34e-18 | 52 |
neural rod | 1.34e-18 | 52 |
future spinal cord | 1.34e-18 | 52 |
neural keel | 1.34e-18 | 52 |
ecto-epithelium | 1.35e-18 | 73 |
pre-chordal neural plate | 4.09e-17 | 49 |
brain | 2.38e-15 | 47 |
future brain | 2.38e-15 | 47 |
regional part of brain | 1.02e-14 | 46 |
anterior neural tube | 2.94e-14 | 40 |
regional part of forebrain | 1.39e-13 | 39 |
forebrain | 1.39e-13 | 39 |
future forebrain | 1.39e-13 | 39 |
gray matter | 1.82e-12 | 34 |
brain grey matter | 3.01e-09 | 29 |
regional part of telencephalon | 3.01e-09 | 29 |
telencephalon | 3.01e-09 | 29 |
embryo | 1.55e-07 | 320 |
anatomical conduit | 3.19e-07 | 122 |
tube | 8.02e-07 | 114 |