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FFCP PHASE1:Mm9::chr1:154613670..154613681,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67771
|EntrezGene=67771
|HGNC=
|HGNC=
|MCL_coexpression_id=1914
|MCL_coexpression_id=1914
|TSSclassifier=NA
|UniProt=Q9CPW4,Q3UA72
|UniProt=Q9CPW4,Q3UA72
|association_with_transcript=0bp_to_ENSMUST00000077755,ENSMUST00000097536,NM_026369,uc007czj.2_5end
|association_with_transcript=0bp_to_ENSMUST00000077755,ENSMUST00000097536,NM_026369,uc007czj.2_5end
|cluster_id=chr1:154613670..154613681,+
|description=CAGE_peak_3_at_Arpc5_5end
|description=CAGE_peak_3_at_Arpc5_5end
|id=chr1:154613670..154613681,+
|id=chr1:154613670..154613681,+
|ontology_enrichment_celltype=CL:0000117!7.41e-08!23;CL:0000337!7.41e-08!23
|ontology_enrichment_celltype=CL:0000117!7.41e-08!23;CL:0000337!7.41e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.91e-08,23;CL:0000337,6.91e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.88e-13!34;UBERON:0001049!9.83e-13!52;UBERON:0005068!9.83e-13!52;UBERON:0006241!9.83e-13!52;UBERON:0007135!9.83e-13!52;UBERON:0000955!5.68e-11!50;UBERON:0006238!5.68e-11!50;UBERON:0003056!6.15e-11!49;UBERON:0002780!6.59e-11!39;UBERON:0001890!6.59e-11!39;UBERON:0006240!6.59e-11!39;UBERON:0002791!7.06e-11!29;UBERON:0003528!7.06e-11!29;UBERON:0001893!7.06e-11!29;UBERON:0003080!7.57e-11!40;UBERON:0000033!1.19e-10!63;UBERON:0002616!1.28e-10!49;UBERON:0001017!9.63e-10!73;UBERON:0005743!9.63e-10!73;UBERON:0000073!1.04e-09!75;UBERON:0001016!1.04e-09!75;UBERON:0002346!1.09e-09!71;UBERON:0003075!1.09e-09!71;UBERON:0007284!1.09e-09!71;UBERON:0000956!1.78e-07!21;UBERON:0001869!1.78e-07!21;UBERON:0000203!1.78e-07!21;UBERON:0004121!3.86e-07!102;UBERON:0000924!3.86e-07!102;UBERON:0006601!3.86e-07!102
|ontology_enrichment_uberon=UBERON:0002020!1.88e-13!34;UBERON:0001049!9.83e-13!52;UBERON:0005068!9.83e-13!52;UBERON:0006241!9.83e-13!52;UBERON:0007135!9.83e-13!52;UBERON:0000955!5.68e-11!50;UBERON:0006238!5.68e-11!50;UBERON:0003056!6.15e-11!49;UBERON:0002780!6.59e-11!39;UBERON:0001890!6.59e-11!39;UBERON:0006240!6.59e-11!39;UBERON:0002791!7.06e-11!29;UBERON:0003528!7.06e-11!29;UBERON:0001893!7.06e-11!29;UBERON:0003080!7.57e-11!40;UBERON:0000033!1.19e-10!63;UBERON:0002616!1.28e-10!49;UBERON:0001017!9.63e-10!73;UBERON:0005743!9.63e-10!73;UBERON:0000073!1.04e-09!75;UBERON:0001016!1.04e-09!75;UBERON:0002346!1.09e-09!71;UBERON:0003075!1.09e-09!71;UBERON:0007284!1.09e-09!71;UBERON:0000956!1.78e-07!21;UBERON:0001869!1.78e-07!21;UBERON:0000203!1.78e-07!21;UBERON:0004121!3.86e-07!102;UBERON:0000924!3.86e-07!102;UBERON:0006601!3.86e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.65e-13,34;UBERON:0000073,4.88e-13,54;UBERON:0001049,9.47e-13,52;UBERON:0005068,9.47e-13,52;UBERON:0006241,9.47e-13,52;UBERON:0007135,9.47e-13,52;UBERON:0002346,1.61e-12,64;UBERON:0003075,1.61e-12,64;UBERON:0007284,1.61e-12,64;UBERON:0010371,9.41e-12,73;UBERON:0000955,3.34e-11,47;UBERON:0006238,3.34e-11,47;UBERON:0003056,6.09e-11,49;UBERON:0003528,6.36e-11,29;UBERON:0002791,6.36e-11,29;UBERON:0001893,6.36e-11,29;UBERON:0002780,6.92e-11,39;UBERON:0001890,6.92e-11,39;UBERON:0006240,6.92e-11,39;UBERON:0002616,7.65e-11,46;UBERON:0003080,7.95e-11,40;UBERON:0001017,6.63e-10,73;UBERON:0001016,7.19e-10,75;UBERON:0004121,6.39e-09,95;UBERON:0000924,6.39e-09,95;UBERON:0006601,6.39e-09,95;UBERON:0010314,1.46e-08,92;UBERON:0000956,1.67e-07,21;UBERON:0001869,1.67e-07,21;UBERON:0000203,1.67e-07,21
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|phase1_expression=2.88267924788629,8.72438519098403,3.18499467572675,1.81478526784098,0.500895729946347,1.34303417529512,1.16806320297763,0.903863264091034,0.84473233291,1.87251621057595,1.19852577757853,0.717949430958028,0.684802919724823,0.437102012094987,2.33176833270964,2.83465374345756,4.89693314689703,1.73504190947031,2.05671650408608,1.27316895539409,2.38121212422995,0.794327609607082,0.783599367416806,1.75991665072747,1.83527424853736,1.72269589234506,1.7230479846363,0.861884930743556,0.570070258369122,1.76421090831952,1.77384408524244,1.27006134691926,0.61506478758457,0,1.1554064790051,1.32987716286794,1.02084678131185,13.393012183581,7.0320181007142,7.32933241563318,12.3528612486513,16.3930916390027,16.9928623560904,0.503587271902309,1.31790010585369,1.46837401729345,3.12956537739216,0.65407546914134,1.5378032791413,2.52758868796568,1.39986421625363,2.87505128729943,1.51004345451963,0,0.672187598284928,1.80081605225163,2.0057340795713,1.54701627683233,6.87875966922632,2.64495489636016,2.53532561402472,3.38844532069132,0,0,0.988866362566974,0.7104801149461,1.49800055259202,1.53687322128622,2.59224030771194,2.8351247049655,2.10324961351382,3.71346279724945,5.52171352379034,2.9397791811589,2.58782771749238,2.75765635983006,1.10115880999389,2.80912143787413,2.15049146558741,3.95658863190582,4.48289453651807,6.25096044668112,2.79182999001381,2.25105044012672,2.75036845998258,3.53554302568401,2.98980529678116,5.03278503728312,1.59025005999687,2.26714680320357,1.15945795480671,2.58127163094416,2.03991400112325,2.15881276655127,1.29955283489534,3.13618820968135,0.842666520790511,1.70430322578058,2.07828803682295,1.41335829804136,4.50698943285378,1.28326477414318,0,7.11066703153331,1.08245520505607,1.77351905832569,1.01104889002957,1.59857431606684,1.29468941823586,1.48442139064825,1.90833859442749,0.304465478312141,1.15307748628029,1.20578112442098,1.52865319276416,1.13099932196708,2.22475470960936,0.86759614151947,0,1.45590164952668,3.5334642953663,0.969750506270444,1.86391761218122,1.75668478206928,1.67557365450764,1.27728527604296,1.55759661857696,1.19980546198682,2.03312363316904,1.9472783122627,3.66000482254901,8.79580464790051,6.77914848749878,5.11430914660661,3.32460871295296,4.86723789203273,3.86989582631202,3.11017426525233,3.0326731012041,0.841767423545896,1.56144531555244,2.98872735763515,2.52086981727489,2.71268672104287,4.28629944653366,3.84341160854549,2.52994656311268,0.517406741478031,1.29340795759705,0.567318240503458,2.63926686245923,2.19195732427575,0.834141747676794,2.089512999133,0.61734640922383,1.39323986772945,2.1066395619397,1.54408744268829,1.42081749697796,1.65700618028402,1.87620847984877,1.44049649168812,1.89395788468168,1.96764231747404,2.00547246753592,2.32533944750408,1.3413670069981,3.03589890154641,1.81015834904829,0.985004784474571,1.70244500046297,1.75439984910399,1.97595103761946,0.805238512562231,9.46304768538573,7.9236551532049,1.65209391491899,1.85115396664481,0.639864751605702,2.09013004674395,1.80414445850931,2.21851877085677,1.77902435075896,1.71203063501303,2.37264530772256,2.14108641141214,2.26201687920243,1.59165177632921,1.9496408711912,0.898819408654221,1.51296634912286,1.39398891278057,2.65535061334314,2.85621281524322,0,1.01825663922657,1.93952487167626,3.57692681440625,3.60448261608267,2.65698266363284,2.82597710114475,1.72756029490521,1.77871576252289,1.66845105716094,0.589676985339609,0.449724224769707,2.02860121388503,1.4470629585145,0.763877555344259,0.863088412352432,2.2698931748505,1.92192989231657,1.43768206527355,1.86070473834252,1.87222603868736,1.76805214562978,0.896987067609561,2.8946611281802,0.923765950833023,1.89491411770485,1.79261474086228,0.678980343100753,0.938760993154008,2.1775813467436,1.19021820443007,1.36593553500459,1.7339865851681,2.43611158613652,1.75400245523236,0.81931657357869,0.690739927463582,0.867894351489069,6.03165135757089,0.54390568381871,0.983528546038072,0.827810238914197,3.37156238974363,3.6335622843583,2.29508923527346,1.00988370881749,2.2085575359138,2.34263246577983,0.430846795465598,0.716906393857656,1.11399337041197,1.13230612315533,1.21443210502468,0.292255857911312,1.18586333383957,2.89189184779626,1.56134093729095,1.42452482933804,2.76907830901079,1.15479086080775,2.65490276679926,1.94224508923985,1.81394134178851,2.64047111658257,2.65771703592696,1.22974059177571,3.10113951801865,2.18120237686503,1.42598951353889,1.8962205476149,3.16255825724996,1.03135543248187,2.38307724027652,1.62054984628179,1.03486947026204,0.857348140126369,2.48276327099183,2.67553226403106,2.46823530903181,2.74018454203139,1.17335854031855,0.63549621259146,1.10264199027481,2.63818004706368,2.42196640043858,1.38719727334758,1.79058516004705,1.64140899745061,1.45740418314925,1.29797711407357,0.512612642393558,1.44470807574256,1.29636169158798,2.44878994106098,1.50363650493128,1.60144721244566,1.86976272993241,2.23922323717853,2.21119958087078,0.954670618015114,2.53068794864908,1.82987520414164,1.40406943068342,1.67270636811575,1.31017538247707,1.21377911746339,1.98368293740806,0.523511883968059,2.07383957266869,0.621339313086926,2.25477175473676,1.49516546043979,2.31641886639937,1.94451188344048,1.54991788173277,2.19642963138012,3.28600268208111,3.25510962109875,3.35549902162275,2.65742532908607,2.01621004380506,2.8441000856536,1.62180172232131,2.67048488628551,1.55904987573354,1.79026695667481,1.98681354781265,0.961563596159751,1.32920574457119,1.9183625490148,1.905170166375,1.31074040677893,0.779663045918019,1.25075394132428,1.5193997283604,0.680191150845634,1.33191572024439,1.70456327558004,2.01461539636894,0.772758376128762,1.87682475451182,0.73260649706906,0.857473516316263,1.00314420807073,9.60078132449013,5.06357760157895,4.01026859407578,3.43706364687375,3.42541259885321,3.0215755895588,2.70009000092722,4.05289082901798,3.17199686288943,1.03552062350364,1.03787347584177,2.39414924040619,1.36586884603307,1.45864030240976,2.30574478890781,3.30918315210025,2.66696073361938,1.85431551515005,2.24643446714271,1.01078884705519,2.78827229879264,1.69763707247469,1.591905626988,1.40855335290712,1.32101578597911,2.38146845641537,2.43357084484197,2.70072908649187,2.06042950401653,1.47198920134397,1.02860775715625,1.59728225543404,2.38436189947321,1.45346416632329,1.59985946706062,1.77690676572521,1.28049581010941,2.10455769150274,1.08643291076689,1.12228454331548,1.42362021749009,1.28055827088233,2.45538625901814,1.70430525304563,2.12197272079256,1.99848462350357,1.40358965067245,2.14871054048298,3.25190164517034,1.54413993383661,0.927471342481686
|short_description=p3@Arpc5
|short_description=p3@Arpc5
}}
}}

Latest revision as of 13:40, 26 September 2015

Short description:p3@Arpc5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Arpc5_5end
Coexpression cluster:MCL_coexpression_mm9:1914
Association with transcript: 0bp_to_ENSMUST00000077755, ENSMUST00000097536, NM_026369, uc007czj.2_5end
EntrezGene:Arpc5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Arpc5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C36.88
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F92.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F18.80
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C64.29
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E89.46
hippocampus, neonate N00.CNhs11228.627-43G17.92
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G73.58
kidney, neonate N10.CNhs11206.758-6D53.60
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.91e-0823
neuroblast (sensu Vertebrata)6.91e-0823

Uber anatomy
Ontology termp-valuen
gray matter1.65e-1334
regional part of nervous system4.88e-1354
neural tube9.47e-1352
neural rod9.47e-1352
future spinal cord9.47e-1352
neural keel9.47e-1352
neurectoderm1.61e-1264
neural plate1.61e-1264
presumptive neural plate1.61e-1264
ecto-epithelium9.41e-1273
brain3.34e-1147
future brain3.34e-1147
pre-chordal neural plate6.09e-1149
brain grey matter6.36e-1129
regional part of telencephalon6.36e-1129
telencephalon6.36e-1129
regional part of forebrain6.92e-1139
forebrain6.92e-1139
future forebrain6.92e-1139
regional part of brain7.65e-1146
anterior neural tube7.95e-1140
central nervous system6.63e-1073
nervous system7.19e-1075
ectoderm-derived structure6.39e-0995
ectoderm6.39e-0995
presumptive ectoderm6.39e-0995
structure with developmental contribution from neural crest1.46e-0892
cerebral cortex1.67e-0721
cerebral hemisphere1.67e-0721
pallium1.67e-0721
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