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FFCP PHASE1:Mm9::chr6:122824544..122824591,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67602
|EntrezGene=67602
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9CR95,Q0VB06
|UniProt=Q9CR95,Q0VB06
|association_with_transcript=0bp_to_ENSMUST00000032477,NM_026267,uc009dpt.1_5end
|association_with_transcript=0bp_to_ENSMUST00000032477,NM_026267,uc009dpt.1_5end
|cluster_id=chr6:122824544..122824591,+
|description=CAGE_peak_1_at_Necap1_5end
|description=CAGE_peak_1_at_Necap1_5end
|id=chr6:122824544..122824591,+
|id=chr6:122824544..122824591,+
|ontology_enrichment_celltype=CL:0000117!1.97e-08!23;CL:0000337!1.97e-08!23
|ontology_enrichment_celltype=CL:0000117!1.97e-08!23;CL:0000337!1.97e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.97e-08,23;CL:0000337,1.97e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.51e-15!52;UBERON:0005068!4.51e-15!52;UBERON:0006241!4.51e-15!52;UBERON:0007135!4.51e-15!52;UBERON:0002346!2.01e-14!71;UBERON:0003075!2.01e-14!71;UBERON:0007284!2.01e-14!71;UBERON:0000955!3.03e-14!50;UBERON:0006238!3.03e-14!50;UBERON:0002616!1.10e-13!49;UBERON:0000033!7.79e-13!63;UBERON:0002020!1.19e-12!34;UBERON:0001017!2.19e-12!73;UBERON:0005743!2.19e-12!73;UBERON:0000073!6.66e-12!75;UBERON:0001016!6.66e-12!75;UBERON:0003080!1.63e-11!40;UBERON:0003056!3.27e-11!49;UBERON:0002780!6.78e-11!39;UBERON:0001890!6.78e-11!39;UBERON:0006240!6.78e-11!39;UBERON:0002791!3.51e-10!29;UBERON:0003528!3.51e-10!29;UBERON:0001893!3.51e-10!29;UBERON:0004121!7.60e-10!102;UBERON:0000924!7.60e-10!102;UBERON:0006601!7.60e-10!102;UBERON:0002021!4.95e-07!10;UBERON:0000411!4.95e-07!10;UBERON:0001950!4.95e-07!10;UBERON:0000025!8.40e-07!114
|ontology_enrichment_uberon=UBERON:0001049!4.51e-15!52;UBERON:0005068!4.51e-15!52;UBERON:0006241!4.51e-15!52;UBERON:0007135!4.51e-15!52;UBERON:0002346!2.01e-14!71;UBERON:0003075!2.01e-14!71;UBERON:0007284!2.01e-14!71;UBERON:0000955!3.03e-14!50;UBERON:0006238!3.03e-14!50;UBERON:0002616!1.10e-13!49;UBERON:0000033!7.79e-13!63;UBERON:0002020!1.19e-12!34;UBERON:0001017!2.19e-12!73;UBERON:0005743!2.19e-12!73;UBERON:0000073!6.66e-12!75;UBERON:0001016!6.66e-12!75;UBERON:0003080!1.63e-11!40;UBERON:0003056!3.27e-11!49;UBERON:0002780!6.78e-11!39;UBERON:0001890!6.78e-11!39;UBERON:0006240!6.78e-11!39;UBERON:0002791!3.51e-10!29;UBERON:0003528!3.51e-10!29;UBERON:0001893!3.51e-10!29;UBERON:0004121!7.60e-10!102;UBERON:0000924!7.60e-10!102;UBERON:0006601!7.60e-10!102;UBERON:0002021!4.95e-07!10;UBERON:0000411!4.95e-07!10;UBERON:0001950!4.95e-07!10;UBERON:0000025!8.40e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.17e-16,54;UBERON:0001049,4.51e-15,52;UBERON:0005068,4.51e-15,52;UBERON:0006241,4.51e-15,52;UBERON:0007135,4.51e-15,52;UBERON:0002346,4.21e-14,64;UBERON:0003075,4.21e-14,64;UBERON:0007284,4.21e-14,64;UBERON:0002020,1.19e-12,34;UBERON:0000955,1.60e-12,47;UBERON:0006238,1.60e-12,47;UBERON:0001017,2.19e-12,73;UBERON:0002616,5.54e-12,46;UBERON:0001016,6.66e-12,75;UBERON:0003080,1.63e-11,40;UBERON:0003056,3.27e-11,49;UBERON:0002780,6.78e-11,39;UBERON:0001890,6.78e-11,39;UBERON:0006240,6.78e-11,39;UBERON:0010371,1.53e-10,73;UBERON:0010314,1.77e-10,92;UBERON:0003528,3.51e-10,29;UBERON:0002791,3.51e-10,29;UBERON:0001893,3.51e-10,29;UBERON:0004121,2.79e-09,95;UBERON:0000924,2.79e-09,95;UBERON:0006601,2.79e-09,95;UBERON:0002021,4.95e-07,10;UBERON:0000411,4.95e-07,10;UBERON:0001950,4.95e-07,10;UBERON:0000025,8.40e-07,114
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,28.8713643320125,31.6455648607878,25.9269487057941,29.9156712332263,29.5352918582757,32.8134219229584,33.5047605739558,44.9763957322521,39.1443767244763,23.675103424736,32.1460573994554,31.6025716773056,40.4458471755619,28.6734808120563,36.8324353569896,32.3905978662281,30.0772128989525,35.1278803826131,32.1306880698588,27.6508806007551,25.2808896502543,21.8943232513377,23.9316530194047,17.7991527479579,19.1558564364205,21.6562676711579,19.351467372715,20.3811547500917,19.9913570897332,19.35652889037,23.5933273220207,25.2415911115959,24.6302314599243,25.9466722843083,24.0334206632124,61.934080991364,66.8368231740594,80.9203850874858,24.9214576301526,33.5951631057616,30.9526245011678,16.7207335681671,39.1226241147583,130.457675644542,137.637245715646,150.671520034561,141.778875433542,123.999936078486,113.309084608455,145.129837549838,143.652463828526,152.708991827677,142.38408573175,32.0702904035106,35.9122386060928,38.7565285061885,32.0900866530148,39.1976614114327,36.4010146731028,41.3378913711004,31.7293988147897,43.6450125044869,36.8937929175144,38.5288535833164,39.4229053496899,38.9548671074711,41.1041478439261,43.5935209373105,39.5323763764951,35.2288350872361,40.5109362973781,42.0327618819373,34.5917462315834,37.0298792576249,41.1743870289663,39.1035351513606,33.4296758254356,39.6200491548542,41.7996162984882,39.5124421405189,40.5127355614278,42.235079406063,25.812544496256,32.3873599478995,38.7122615735964,29.0554040650479,40.2835787083512,31.443777589926,44.7160934508923,37.8969205681562,33.0901423234379,33.8580347761853,34.4122613826444,38.49006071299
|phase1_expression=41.7988490943512,61.4196717445275,57.7849034024711,74.4061959814802,57.6030089438299,30.2182689441402,30.1360306368228,29.9566110384457,69.9719949093784,73.9643903177499,33.7299397404245,31.7493192801439,33.0417408767227,38.4649770643589,11.6588416635482,15.7930708564064,18.1886088313318,33.9121827760106,30.987861994897,25.4633791078818,55.7883983391018,20.751808800985,21.6795824985316,40.7980678123187,35.5584385654114,49.9581808780068,43.5069616120666,48.6964985870109,51.4963466726773,44.3573028377478,32.8161155769851,30.4814723260623,19.6820732027062,31.6963362030877,22.2415747208481,21.1117999605285,19.8044275574498,59.8500231953778,17.1893775795236,33.5055196143231,49.9996764826362,59.4249571913848,58.2612423637384,38.6503231185022,36.1915644453667,40.0131919712466,19.559783608701,20.9304150125229,30.0970070346226,29.5533446592911,26.7374065304442,14.3752564364972,51.5092600597251,36.2681071005672,35.9620365082436,30.3566134522417,23.7822755149168,28.8776371675368,55.2323938146702,57.1310257613796,61.4816461400994,23.7191172448392,16.8966011261116,36.8958884085374,37.576921777545,45.4707273565504,23.3688086204356,23.0530983192933,41.9942929849335,39.8267518078487,37.6481680818974,97.6926366661008,97.8447636415648,48.016393292262,42.6512346031152,34.9303138911808,151.959915779156,151.054120954777,162.515712185106,58.4256254644759,66.0540786809398,59.9050376140274,176.443655368873,184.586136090391,170.981239262251,88.683204227574,87.4162120106492,76.9829711258491,34.3039655799324,32.9492002065585,31.8850937571846,37.858650587181,57.7975633651588,60.4467574634355,51.9821133958135,53.3151995645829,46.3466586434781,25.3941180641306,21.5622383820381,22.6137327686618,31.8306128695298,29.5150898052931,28.028576367731,7.11066703153331,14.7213907887626,14.9482320630308,17.6933555755174,49.6699876777911,67.5827876319118,41.8606832162806,33.3091827390981,39.8849776588905,46.1230994512117,46.724018571313,43.5078216402108,41.0929753648039,88.0014085134371,39.7648231529757,20.3460426948471,36.2357743882197,25.6176161414057,25.6983884161668,35.4144346314432,134.3863858283,164.206218141749,42.6613282198348,40.9767725810247,26.9956228947033,46.7618435628878,195.177203144484,171.562726056985,91.0994052818267,189.989981970158,192.298023912409,164.360343246612,174.084875271704,32.7922751598018,28.4891962697113,41.193809624689,39.1421851948842,36.6939649154824,34.7152177694544,33.8516804034057,41.1424152691502,41.298154984856,49.8362371908066,38.3240053449291,80.9741550413119,25.6525911590082,35.9301552318857,32.9028602186584,28.2762494831572,37.8144258946813,29.253181987862,39.7159523267331,33.8358253591438,28.0885274925294,25.9921386185862,33.2471294292843,38.7325194641389,46.201633816276,41.7743982589555,37.168923486878,37.1884398002593,39.6466480120562,40.6934403313214,35.948635787549,35.846960106721,36.6968465307061,40.8776985556947,29.4279778651456,31.7253972712971,34.469368100695,26.1702516582725,194.097622524689,85.1021144376682,111.681548648524,52.6256627660453,37.3254438436659,33.6743174197636,31.3147931012687,34.2861991859682,32.0224383136613,49.4586627892654,47.4529061544512,58.9622257911959,55.5450811448596,57.6973768919337,47.3762731699462,51.2327062932906,62.0316203140372,50.5818834066093,25.605166628666,30.7328498920171,27.0498565615393,31.769607143869,26.9593957163,30.8597607517402,31.3653224136316,33.0646731474309,41.1336666944402,33.6874257506515,67.8876516029571,21.8567088488083,23.5870794135844,26.3088671490279,26.1689556591169,32.3177394068239,42.2678913957157,28.1942214701794,42.4794294150593,43.3807032837169,53.1942364151212,51.727591725922,46.181575620955,50.7683544673695,51.4870576807888,68.5069800335981,33.4403274201554,27.2867632949498,27.0521860893763,26.8197235524797,30.5097322775053,28.8110762799923,30.2315423925237,30.6359827136744,31.2117585330258,32.5553093783699,28.7018583583477,32.6087996284319,38.6814359379606,34.2818268838182,72.3798162908507,70.7077388964322,38.8493775685039,32.8364728102632,211.284576423934,207.816320327976,38.1968422727654,35.0934588814078,32.4973465998744,32.406415776621,42.869256148827,22.4630670075399,26.5130422158049,29.4399592020386,35.6233417473907,43.2538669708742,39.5287777946523,143.630628440548,33.2139799387349,34.0105303004458,35.0206962610189,28.5398312742486,66.3725691699814,33.7465084255424,35.0695326079111,70.5382998287059,71.7583599700278,71.0175191750472,60.4722206013637,50.5311883973733,58.1090726767096,79.009189483954,84.334886859999,64.9753922463577,70.8114379967879,28.449652856947,31.6928775267749,34.5082626400864,45.5764400460643,43.7003603125073,54.7948238605063,57.8483403317739,53.9744928546534,77.1068737944305,74.3180701445222,25.5573692059294,32.6158141925729,27.080503292742,20.5320431685395,22.4873032650734,68.4979966080149,185.981577916541,18.7957968877638,29.3069352507776,22.0381487569957,19.0252141574738,17.2234726928492,16.7008066440762,41.9846722084823,46.1839792668071,49.890190543397,36.2774834845743,26.7303914576059,28.8713643320125,31.6455648607878,25.9269487057941,29.9156712332263,29.5352918582757,32.8134219229584,33.5047605739558,44.9763957322521,39.1443767244763,23.675103424736,32.1460573994554,31.6025716773056,40.4458471755619,28.6734808120563,36.8324353569896,32.3905978662281,30.0772128989525,35.1278803826131,32.1306880698588,27.6508806007551,25.2808896502543,21.8943232513377,23.9316530194047,17.7991527479579,19.1558564364205,21.6562676711579,19.351467372715,20.3811547500917,19.9913570897332,19.35652889037,23.5933273220207,25.2415911115959,24.6302314599243,25.9466722843083,24.0334206632124,61.934080991364,66.8368231740594,80.9203850874858,24.9214576301526,33.5951631057616,30.9526245011678,16.7207335681671,39.1226241147583,130.457675644542,137.637245715646,150.671520034561,141.778875433542,123.999936078486,113.309084608455,145.129837549838,143.652463828526,152.708991827677,142.38408573175,32.0702904035106,35.9122386060928,38.7565285061885,32.0900866530148,39.1976614114327,36.4010146731028,41.3378913711004,31.7293988147897,43.6450125044869,36.8937929175144,38.5288535833164,39.4229053496899,38.9548671074711,41.1041478439261,43.5935209373105,39.5323763764951,35.2288350872361,40.5109362973781,42.0327618819373,34.5917462315834,37.0298792576249,41.1743870289663,39.1035351513606,33.4296758254356,39.6200491548542,41.7996162984882,39.5124421405189,40.5127355614278,42.235079406063,25.812544496256,32.3873599478995,38.7122615735964,29.0554040650479,40.2835787083512,31.443777589926,44.7160934508923,37.8969205681562,33.0901423234379,33.8580347761853,34.4122613826444,38.49006071299
|short_description=p1@Necap1
|short_description=p1@Necap1
}}
}}

Latest revision as of 15:08, 26 September 2015

Short description:p1@Necap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Necap1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000032477, NM_026267, uc009dpt.1_5end
EntrezGene:Necap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Necap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G741.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I561.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I657.78
CD326+ enterocyte, pool1.CNhs13542.11848-124I374.41
CD326+ enterocyte, pool2.CNhs13197.11849-124I457.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I730.22
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I830.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E929.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E769.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F273.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E633.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F131.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E433.04
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.79
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A518.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A233.91
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A430.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A625.46
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A355.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.75
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.68
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D140.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D235.56
GP2+ M cell, pool1.CNhs13228.11845-124H949.96
GP2+ M cell, pool2.CNhs13231.11846-124I143.51
GP2+ M cell, pool3.CNhs13240.11847-124I248.70
Ileum epithelium, pool1.CNhs13199.10252-104B951.50
Ileum epithelium, pool2.CNhs13232.10253-104C144.36
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C832.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I330.48
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G619.68
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F522.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F621.11
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F719.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G859.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H333.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G950.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H259.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H458.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D838.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D936.19
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B340.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.93
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B830.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C329.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C426.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A251.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I936.27
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A135.96
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C130.36
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.78
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C528.88
Mouse Granule cells, donor1.CNhs12131.11713-123C355.23
Mouse Granule cells, donor2.CNhs12357.11731-123E357.13
Mouse Granule cells, donor3.CNhs12108.11636-122C761.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C623.72
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C736.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E737.58
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D245.47
Mouse Microglia, donor1.CNhs12629.11718-123C823.37
Mouse Microglia, donor2.CNhs12634.11736-123E823.05
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D541.99
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F539.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D937.65
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F197.69
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D597.84
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D248.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F242.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.93
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3151.96
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3151.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7162.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D458.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F466.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D859.91
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4176.44
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5184.59
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6170.98
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D688.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F687.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E176.98
Mouse Schwann, donor1.CNhs12507.11728-123D934.30
Mouse Schwann, donor2.CNhs12573.11746-123F932.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G331.89
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C457.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C860.45
Mouse hepatocyte, donor6.CNhs13090.11822-124F451.98
Mouse hepatocyte, donor8.CNhs13091.11824-124F653.32
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A746.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I725.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G631.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.72
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.69
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B649.67
accessory axillary lymph node, adult.CNhs10475.1063-29H967.58
adrenal gland, adult.CNhs10508.49-24D741.86
adrenal gland, embryo E14.CNhs11038.406-44C533.31
adrenal gland, embryo E16.CNhs11004.1254-43D639.88
adrenal gland, embryo E17.CNhs11043.1263-45I146.12
adrenal gland, embryo E18.CNhs11026.1262-18F546.72
adrenal gland, neonate N00.CNhs11191.1311-23C143.51
adrenal gland, neonate N25.CNhs11223.1377-27I341.09
amnion, adult pregnant day17.5.CNhs10488.583-22A888.00
aorta, adult.CNhs10498.46-23H139.76
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F536.24
bone (os femoris), neonate N16.CNhs11225.1525-43A625.62
bone (os femoris), neonate N20.CNhs11195.1350-25C325.70
cecum, adult.CNhs10467.37-13H435.41
cerebellum, adult.CNhs10494.15-8B2134.39
cerebellum, neonate N30.CNhs11135.1395-42I2164.21
colon, adult.CNhs10468.36-18H742.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C740.98
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D127.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D446.76
corpora quadrigemina, adult.CNhs10501.16-22A4195.18
corpus striatum, adult.CNhs10487.19-21D8171.56
corpus striatum, neonate N00.CNhs11226.630-43F191.10
cortex, adult.CNhs10473.12-14D5189.99
cortex, neonate N30.CNhs11107.1392-42F2192.30
diencephalon, adult.CNhs10482.20-12F2164.36
diencephalon, neonate N30.CNhs11201.1388-42B2174.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B132.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A228.49
epididymis, adult.CNhs10490.58-23B241.19
eyeball, adult.CNhs10484.31-12G439.14
eyeball, embryo E12.CNhs11016.345-16C636.69
eyeball, embryo E14.CNhs10521.399-16E234.72
eyeball, embryo E15.CNhs10593.426-16C933.85
eyeball, embryo E17.CNhs11023.1261-18D441.14
eyeball, neonate N00.CNhs11207.633-15C641.30
eyeball, neonate N01.CNhs11140.1532-43E749.84
eyeball, neonate N02.CNhs11205.1551-44G838.32
eyeball, neonate N16.CNhs11188.777-19A280.97
forelimb, embryo E11.CNhs10596.335-25E225.65
forelimb, embryo E12.CNhs10600.359-14H235.93
forelimb, embryo E13.CNhs10589.384-1E232.90
forelimb, embryo E14.CNhs10577.413-26A828.28
forelimb, embryo E15.CNhs11007.437-20E737.81
forelimb, embryo E17.CNhs10598.1517-43C429.25
forelimb, embryo E18.CNhs11008.1520-43B539.72
gonad, embryo E13.CNhs11044.1564-45I633.84
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C828.09
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.99
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D533.25
heart, embryo E11.CNhs10586.331-24E938.73
heart, embryo E12.CNhs11015.353-12F546.20
heart, embryo E13.CNhs11013.376-3I941.77
heart, embryo E14.CNhs10597.403-26D437.17
heart, embryo E15.CNhs11017.431-16C837.19
heart, embryo E16.CNhs11021.457-17C639.65
heart, embryo E17.CNhs11025.479-18E540.69
heart, embryo E18.CNhs11030.1283-20G335.95
heart, neonate N00.CNhs11213.639-21E335.85
heart, neonate N03.CNhs11221.1349-25I236.70
heart, neonate N10.CNhs11118.749-24G140.88
heart, neonate N16.CNhs11209.782-15G129.43
heart, neonate N20.CNhs11127.821-26I631.73
heart, neonate N25.CNhs11196.1351-25D334.47
heart, neonate N30.CNhs11202.1390-42D226.17
hippocampus, adult.CNhs10478.13-16E8194.10
hippocampus, neonate N00.CNhs11228.627-43G185.10
intestinal mucosa, adult.CNhs10506.860-29I3111.68
intestine, adult.CNhs10496.178-9A352.63
intestine, embryo E12.CNhs11019.1251-16I537.33
intestine, embryo E13.CNhs11010.381-16D533.67
intestine, embryo E15.CNhs10602.976-16D831.31
intestine, embryo E16.CNhs10585.463-22H434.29
intestine, embryo E17.CNhs10582.482-18D332.02
intestine, embryo E18.CNhs10526.1289-20F749.46
intestine, neonate N00.CNhs11126.644-26D147.45
intestine, neonate N01.CNhs11192.1322-23E958.96
intestine, neonate N06.CNhs11102.688-20B855.55
intestine, neonate N07.CNhs11095.720-20F257.70
intestine, neonate N10.CNhs11098.755-23A547.38
intestine, neonate N20.CNhs11187.827-18D151.23
intestine, neonate N25.CNhs11121.1352-25E362.03
intestine, neonate N30.CNhs11131.1384-42G150.58
kidney, embryo E14.CNhs10606.411-4I925.61
kidney, embryo E15.CNhs10997.434-16F830.73
kidney, embryo E16.CNhs10584.464-22A527.05
kidney, embryo E17.CNhs11028.483-18I231.77
kidney, embryo E18.CNhs11001.1288-20C726.96
kidney, neonate N00.CNhs11214.646-21G730.86
kidney, neonate N10.CNhs11206.758-6D531.37
kidney, neonate N20.CNhs11113.832-19I133.06
kidney, neonate N25.CNhs11122.1353-25F341.13
kidney, neonate N30.CNhs11203.1385-42H133.69
liver, adult pregnant day01.CNhs10466.508-5B267.89
liver, embryo E12.CNhs10601.355-15F821.86
liver, embryo E13.CNhs10524.378-3H623.59
liver, embryo E14.CNhs10594.409-16E126.31
liver, embryo E15.CNhs10520.433-16D726.17
liver, embryo E16.CNhs10523.462-17F532.32
liver, embryo E17.CNhs10510.481-18A342.27
liver, embryo E18.CNhs10579.499-43G428.19
liver, neonate N00.CNhs11117.641-24F442.48
liver, neonate N03.CNhs11123.1345-25G243.38
liver, neonate N06.CNhs11101.684-20A853.19
liver, neonate N07.CNhs11103.716-20H251.73
liver, neonate N10.CNhs11115.751-24B946.18
liver, neonate N20.CNhs11220.823-25A350.77
liver, neonate N25.CNhs11198.1368-26H151.49
liver, neonate N30.CNhs11106.1382-42D168.51
lung, adult.CNhs10474.28-22B133.44
lung, embryo E12.CNhs10522.354-16G227.29
lung, embryo E14.CNhs10604.404-26F827.05
lung, embryo E15.CNhs11020.432-17C526.82
lung, embryo E16.CNhs10998.458-17B630.51
lung, embryo E17.CNhs10605.480-44A628.81
lung, embryo E18.CNhs10583.1287-20I630.23
lung, neonate N00.CNhs11224.640-42C630.64
lung, neonate N06.CNhs11212.683-20E531.21
lung, neonate N07.CNhs11111.715-19A332.56
lung, neonate N10.CNhs11219.750-23E628.70
lung, neonate N20.CNhs11109.822-18A432.61
lung, neonate N25.CNhs11119.1359-25C738.68
lung, neonate N30.CNhs11133.1394-42H234.28
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A172.38
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A170.71
mammary gland, adult lactating day02.CNhs10480.595-22B638.85
mammary gland, adult pregnant day19.CNhs10476.588-5H232.84
medulla oblongata, adult.CNhs10477.17-12C2211.28
medulla oblongata, neonate N30.CNhs11200.1396-42A3207.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C738.20
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C235.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E132.50
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E232.41
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E342.87
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.51
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D929.44
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D435.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D543.25
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D639.53
olfactory brain, adult.CNhs10489.18-22I9143.63
ovary, adult.CNhs10507.91-2I733.21
ovary, embryo E18.CNhs11040.505-44H734.01
ovary, neonate N00.CNhs11217.1299-22I435.02
oviduct, adult pregnant day01.CNhs10500.988-6G628.54
pancreas, adult.CNhs10486.34-16E466.37
pancreas, embryo E14.CNhs11012.405-44F433.75
pancreas, embryo E15.CNhs11042.1556-45F235.07
pancreas, embryo E16.CNhs11003.460-26E570.54
pancreas, embryo E17.CNhs10599.1558-45G371.76
pancreas, embryo E18.CNhs10580.1535-43I771.02
pancreas, neonate N00.CNhs11105.645-26G960.47
pancreas, neonate N01.CNhs11138.1531-43D750.53
pancreas, neonate N02.CNhs11139.1539-43D858.11
pancreas, neonate N16.CNhs11136.787-43B679.01
pancreas, neonate N25.CNhs11094.1555-45E284.33
pancreas, neonate N30.CNhs11182.1548-44H564.98
pituitary gland, adult.CNhs10493.21-1G870.81
pituitary gland, embryo E12.CNhs11018.346-16E628.45
pituitary gland, embryo E13.CNhs11009.370-44C731.69
pituitary gland, embryo E14.CNhs11037.398-44A534.51
pituitary gland, embryo E15.CNhs10592.427-16B945.58
pituitary gland, embryo E16.CNhs11036.449-43F643.70
pituitary gland, embryo E17.CNhs11039.1265-44F554.79
pituitary gland, neonate N00.CNhs11190.1308-22E957.85
placenta, adult pregnant day10.CNhs10472.539-13I753.97
placenta, adult pregnant day17.CNhs10464.577-18G377.11
prostate, adult.CNhs10470.859-1F874.32
skin, adult.CNhs10492.30-1C325.56
skin, neonate N00.CNhs11124.650-25G432.62
skin, neonate N03.CNhs11215.662-22H327.08
skin, neonate N06.CNhs11097.693-20I520.53
skin, neonate N10.CNhs11108.762-6C422.49
small intestine, neonate N16.CNhs11114.790-21I168.50
spinal cord, adult.CNhs10505.24-13C9185.98
spleen, adult.CNhs10465.25-2G218.80
spleen, embryo E16.CNhs11035.461-43C129.31
spleen, embryo E18.CNhs11011.1271-21F222.04
spleen, neonate N10.CNhs11116.752-24D119.03
spleen, neonate N20.CNhs11112.824-19H117.22
spleen, neonate N25.CNhs11099.1354-25G316.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C641.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C946.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D349.89
stomach, adult.CNhs10503.33-1H636.28
stomach, embryo E12.CNhs10588.356-43E326.73
stomach, embryo E15.CNhs10603.1252-16G828.87
stomach, embryo E16.CNhs11022.459-17D431.65
stomach, embryo E17.CNhs11006.1035-18D525.93
stomach, embryo E18.CNhs10999.1286-20C629.92
stomach, neonate N03.CNhs11193.1340-24B829.54
stomach, neonate N07.CNhs11210.718-18A932.81
stomach, neonate N25.CNhs11104.1355-25E433.50
stomach, neonate N30.CNhs11134.1386-42I144.98
submandibular gland, adult.CNhs10469.59-29C139.14
testis, adult.CNhs10504.57-7G523.68
testis, embryo E13.CNhs11031.389-23F532.15
testis, embryo E15.CNhs11034.443-27C531.60
testis, embryo E16.CNhs11033.470-26G540.45
testis, embryo E17.CNhs11029.486-18I528.67
testis, embryo E18.CNhs11027.503-18G536.83
testis, neonate N00.CNhs11189.1300-22B732.39
testis, neonate N07.CNhs11222.726-26I430.08
testis, neonate N10.CNhs11204.763-44D935.13
testis, neonate N20.CNhs11110.839-18H332.13
testis, neonate N30.CNhs11130.1391-42E227.65
thymus, adult.CNhs10471.38-12B525.28
thymus, embryo E14.CNhs11041.402-44I421.89
thymus, embryo E15.CNhs11005.430-45I223.93
thymus, embryo E16.CNhs11002.456-26C517.80
thymus, embryo E17.CNhs10581.478-18C119.16
thymus, embryo E18.CNhs10595.1273-19G421.66
thymus, neonate N02.CNhs11181.1541-43F819.35
thymus, neonate N03.CNhs11137.2104-43C720.38
thymus, neonate N06.CNhs11197.681-26C419.99
thymus, neonate N07.CNhs11211.713-19D319.36
thymus, neonate N10.CNhs11194.748-24E423.59
thymus, neonate N20.CNhs11186.820-7A225.24
thymus, neonate N25.CNhs11125.1362-25G724.63
thymus, neonate N30.CNhs11132.1393-42G225.95
tongue, adult.CNhs10499.32-1B424.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H361.93
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F766.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G580.92
urinary bladder, adult.CNhs10481.879-12E424.92
uterus, adult pregnant day19.CNhs10497.590-15F533.60
uterus, adult.CNhs10509.92-27E530.95
vagina, adult.CNhs10502.89-27D516.72
vesicular gland, adult.CNhs10491.51-27F839.12
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1130.46
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2137.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3150.67
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7141.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4124.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5113.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6145.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7143.65
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8152.71
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9142.38
whole body, embryo E11.CNhs11014.324-5I832.07
whole body, embryo E12.CNhs10587.857-27C935.91
whole body, embryo E13.CNhs10512.372-23H238.76
whole body, embryo E14.5.CNhs10578.420-27D232.09
whole body, embryo E14.CNhs10519.395-14B139.20
whole body, embryo E16.CNhs10514.453-14F236.40
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G541.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G531.73
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G543.65
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G536.89
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G538.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G539.42
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G538.95
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G541.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G543.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G539.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G535.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G540.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G542.03
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G537.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G541.17
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G539.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G533.43
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G539.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G541.80
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G539.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G540.51
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G542.24
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G525.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G538.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G529.06
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G540.28
whole body, embryo E17.5.CNhs10513.490-9F931.44
whole body, embryo E17.CNhs10517.475-3I544.72
whole body, embryo E18.CNhs10516.493-3B337.90
whole body, neonate N00.CNhs10525.657-19C233.09
whole body, neonate N01.CNhs10576.659-23C633.86
whole body, neonate N06.CNhs10515.692-21D134.41
whole body, neonate N10.CNhs10518.761-6B438.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.97e-0823
neuroblast (sensu Vertebrata)1.97e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.17e-1654
neural tube4.51e-1552
neural rod4.51e-1552
future spinal cord4.51e-1552
neural keel4.51e-1552
neurectoderm4.21e-1464
neural plate4.21e-1464
presumptive neural plate4.21e-1464
gray matter1.19e-1234
brain1.60e-1247
future brain1.60e-1247
central nervous system2.19e-1273
regional part of brain5.54e-1246
nervous system6.66e-1275
anterior neural tube1.63e-1140
pre-chordal neural plate3.27e-1149
regional part of forebrain6.78e-1139
forebrain6.78e-1139
future forebrain6.78e-1139
ecto-epithelium1.53e-1073
structure with developmental contribution from neural crest1.77e-1092
brain grey matter3.51e-1029
regional part of telencephalon3.51e-1029
telencephalon3.51e-1029
ectoderm-derived structure2.79e-0995
ectoderm2.79e-0995
presumptive ectoderm2.79e-0995
occipital lobe4.95e-0710
visual cortex4.95e-0710
neocortex4.95e-0710
tube8.40e-07114
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