FFCP PHASE1:Mm9::chr11:101943778..101943807,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:101943778..101943807,- to FFCP PHASE1:Mm9::chr11:101943778..101943807,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=50997 | |EntrezGene=50997 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=93 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WV34 | |UniProt=Q9WV34 | ||
|association_with_transcript=0bp_to_ENSMUST00000100398,uc007lqk.2_5end | |||
|cluster_id=chr11:101943778..101943807,- | |||
|description=CAGE_peak_3_at_Mpp2_5end | |||
|id=chr11:101943778..101943807,- | |||
|ontology_enrichment_celltype=CL:0000117!3.49e-10!23;CL:0000337!3.49e-10!23;CL:0000540!5.41e-07!33;CL:0000047!5.41e-07!33;CL:0000031!5.41e-07!33;CL:0000404!5.41e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.91e-13,23;CL:0000337,2.91e-13,23;CL:0000540,5.01e-08,33;CL:0000047,5.01e-08,33;CL:0000031,5.01e-08,33;CL:0000404,5.01e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.38e-14!71;UBERON:0003075!9.38e-14!71;UBERON:0007284!9.38e-14!71;UBERON:0001017!1.17e-12!73;UBERON:0005743!1.17e-12!73;UBERON:0004121!2.84e-12!102;UBERON:0000924!2.84e-12!102;UBERON:0006601!2.84e-12!102;UBERON:0000073!3.78e-12!75;UBERON:0001016!3.78e-12!75;UBERON:0001049!1.01e-11!52;UBERON:0005068!1.01e-11!52;UBERON:0006241!1.01e-11!52;UBERON:0007135!1.01e-11!52;UBERON:0003056!1.04e-11!49;UBERON:0000033!5.17e-11!63;UBERON:0000955!1.23e-09!50;UBERON:0006238!1.23e-09!50;UBERON:0002780!1.32e-09!39;UBERON:0001890!1.32e-09!39;UBERON:0006240!1.32e-09!39;UBERON:0003080!1.35e-09!40;UBERON:0002616!4.84e-09!49;UBERON:0002020!1.98e-07!34;UBERON:0000153!2.46e-07!94;UBERON:0001894!2.59e-07!10;UBERON:0006222!2.59e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.56e-16,54;UBERON:0001017,2.02e-16,73;UBERON:0001049,3.78e-16,52;UBERON:0005068,3.78e-16,52;UBERON:0006241,3.78e-16,52;UBERON:0007135,3.78e-16,52;UBERON:0001016,9.72e-16,75;UBERON:0002780,2.92e-14,39;UBERON:0001890,2.92e-14,39;UBERON:0006240,2.92e-14,39;UBERON:0003080,9.42e-14,40;UBERON:0002346,9.02e-13,64;UBERON:0003075,9.02e-13,64;UBERON:0007284,9.02e-13,64;UBERON:0000955,2.85e-12,47;UBERON:0006238,2.85e-12,47;UBERON:0001894,3.41e-12,10;UBERON:0006222,3.41e-12,10;UBERON:0000007,3.51e-12,8;UBERON:0003296,3.51e-12,8;UBERON:0010133,3.51e-12,8;UBERON:0004121,2.17e-11,95;UBERON:0000924,2.17e-11,95;UBERON:0006601,2.17e-11,95;UBERON:0003056,3.13e-11,49;UBERON:0002616,3.51e-11,46;UBERON:0002020,4.69e-11,34;UBERON:0010371,2.87e-10,73;UBERON:0001948,2.45e-09,5;UBERON:0002315,2.45e-09,5;UBERON:0010314,8.93e-09,92;UBERON:0002240,1.15e-07,6;UBERON:0005174,1.15e-07,6;UBERON:0001137,1.15e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0.419959264876088,1.43752564364972,0,0,0,0,0,0,2.63011399117477,2.11596391708813,3.80298842103708,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,1.24427534770173,0.270011876663381,0.841299845405528,3.14216082844184,2.87129103237098,1.22490799214954,1.15014565221884,0.919218786610021,1.10115880999389,0.255374676170375,0.307213066512487,2.2420668914133,1.28082701043374,3.12548022334056,0,0.56276261003168,0.61119299110724,1.76777151284201,2.13557521198654,2.98239113320481,0,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,1.04091196059682,0.608930956624282,1.15307748628029,0,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.915001205637253,1.7591609295801,1.39059456153821,0.255715457330331,0.83115217823824,2.75810147215188,0.203678727700633,0,0,0.420883711772948,0.650602214813519,1.14951052216736,0.720248519221397,0.30140963567143,0.884474488967262,0.2562274405697,0.937017245597288,0.776110112217047,2.58681591519411,2.08016688184601,0.703804496655795,0.219195732427575,0.278047249225598,1.0447564995665,0.411564272815887,1.19420560091096,0,0,0,1.24275463521301,0.469052119962192,0.180062061461015,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0.493679549740441,0.164167464079095,0,0,0,0,1.05144974282064,2.16099685996497,0,0,0.639864751605702,0.928946687441754,0.902072229254653,0.605050573870028,0.22237804384487,0.570676878337677,0,0.329397909448022,0.754005626400808,0,0.19496408711912,0,0.216138049874694,0,1.70701110857774,1.14248512609729,1.1270773567308,1.01825663922657,0.387904974335251,0.350679099451593,0.0632365371242573,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.89491411770485,0.162964976442026,0.848725428875941,0.469380496577004,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,0,0.646270193198397,0,0,0.283076530788832,0,0,0.395287777946524,45.9489482483184,0,0.35613120733451,0.488660878060728,0,0,2.18502572539483,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,2.04263763452273,1.08036656418786,1.68166288917581,1.71469628025274,1.77340233642274,2.14042581122485,1.31639216481697,4.26250928760439,0,0,0,0.16488625294148,0.161464426695906,0.482503399425247,0.119372344003136,0,0,0.556275906031529,0,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0,1.89801596148681,0.609958401380546,0.86404272657441,0.418176592028937,0.218362563746178,0.674321731924103,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.387479470433193,0.337912250981556,0.117357238645754,0.39061315453185,0,0,0.288030006257865,0,1.41907650703115,1.64337531463724,0.389762468933385,0.358053391334963,0,0.480781798079875,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0,0,0,0,0,1.12950368523413,0.460325236507177,1.71868654031819,1.20297227640581,0,0.755393897389701,0,0,0,0,1.14166082342594,0.798049746802062,0.341467211508268,0.486213434136588,0.628839487883947,1.10306105070008,1.55572709461131,0.618105171716683,0,1.01078884705519,1.2673964994512,0.943131706930381,0.37456602987953,0.640251524048693,0.574354689556133,0.952587382566147,0.927074607558844,0,1.64834360321323,0.441596760403192,0.342869252385415,0.70990322463735,0.476872379894642,0.581385666529314,0.846984423737976,0.423073039458382,0.73171189149109,0.789209134313529,1.08643291076689,0.561142271657738,0.711810108745045,1.0835493061312,1.63692417267876,0.309873682371932,0.771626443924566,2.49810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0.419959264876088,1.43752564364972,0,0,0,0,0,0,2.63011399117477,2.11596391708813,3.80298842103708,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,1.24427534770173,0.270011876663381,0.841299845405528,3.14216082844184,2.87129103237098,1.22490799214954,1.15014565221884,0.919218786610021,1.10115880999389,0.255374676170375,0.307213066512487,2.2420668914133,1.28082701043374,3.12548022334056,0,0.56276261003168,0.61119299110724,1.76777151284201,2.13557521198654,2.98239113320481,0,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,1.04091196059682,0.608930956624282,1.15307748628029,0,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.915001205637253,1.7591609295801,1.39059456153821,0.255715457330331,0.83115217823824,2.75810147215188,0.203678727700633,0,0,0.420883711772948,0.650602214813519,1.14951052216736,0.720248519221397,0.30140963567143,0.884474488967262,0.2562274405697,0.937017245597288,0.776110112217047,2.58681591519411,2.08016688184601,0.703804496655795,0.219195732427575,0.278047249225598,1.0447564995665,0.411564272815887,1.19420560091096,0,0,0,1.24275463521301,0.469052119962192,0.180062061461015,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0.493679549740441,0.164167464079095,0,0,0,0,1.05144974282064,2.16099685996497,0,0,0.639864751605702,0.928946687441754,0.902072229254653,0.605050573870028,0.22237804384487,0.570676878337677,0,0.329397909448022,0.754005626400808,0,0.19496408711912,0,0.216138049874694,0,1.70701110857774,1.14248512609729,1.1270773567308,1.01825663922657,0.387904974335251,0.350679099451593,0.0632365371242573,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.89491411770485,0.162964976442026,0.848725428875941,0.469380496577004,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,0,0.646270193198397,0,0,0.283076530788832,0,0,0.395287777946524,45.9489482483184,0,0.35613120733451,0.488660878060728,0,0,2.18502572539483,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,2.04263763452273,1.08036656418786,1.68166288917581,1.71469628025274,1.77340233642274,2.14042581122485,1.31639216481697,4.26250928760439,0,0,0,0.16488625294148,0.161464426695906,0.482503399425247,0.119372344003136,0,0,0.556275906031529,0,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0,1.89801596148681,0.609958401380546,0.86404272657441,0.418176592028937,0.218362563746178,0.674321731924103,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.387479470433193,0.337912250981556,0.117357238645754,0.39061315453185,0,0,0.288030006257865,0,1.41907650703115,1.64337531463724,0.389762468933385,0.358053391334963,0,0.480781798079875,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0,0,0,0,0,1.12950368523413,0.460325236507177,1.71868654031819,1.20297227640581,0,0.755393897389701,0,0,0,0,1.14166082342594,0.798049746802062,0.341467211508268,0.486213434136588,0.628839487883947,1.10306105070008,1.55572709461131,0.618105171716683,0,1.01078884705519,1.2673964994512,0.943131706930381,0.37456602987953,0.640251524048693,0.574354689556133,0.952587382566147,0.927074607558844,0,1.64834360321323,0.441596760403192,0.342869252385415,0.70990322463735,0.476872379894642,0.581385666529314,0.846984423737976,0.423073039458382,0.73171189149109,0.789209134313529,1.08643291076689,0.561142271657738,0.711810108745045,1.0835493061312,1.63692417267876,0.309873682371932,0.771626443924566,2.49810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0,0.463735671240843 | ||
|short_description=p3@Mpp2 | |||
}} | }} |
Latest revision as of 17:51, 26 September 2015
Short description: | p3@Mpp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mpp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | 0bp_to_ENSMUST00000100398, uc007lqk.2_5end |
EntrezGene: | Mpp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.91e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.91e-13 | 23 |
neuron | 5.01e-08 | 33 |
neuronal stem cell | 5.01e-08 | 33 |
neuroblast | 5.01e-08 | 33 |
electrically signaling cell | 5.01e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.56e-16 | 54 |
central nervous system | 2.02e-16 | 73 |
neural tube | 3.78e-16 | 52 |
neural rod | 3.78e-16 | 52 |
future spinal cord | 3.78e-16 | 52 |
neural keel | 3.78e-16 | 52 |
nervous system | 9.72e-16 | 75 |
regional part of forebrain | 2.92e-14 | 39 |
forebrain | 2.92e-14 | 39 |
future forebrain | 2.92e-14 | 39 |
anterior neural tube | 9.42e-14 | 40 |
neurectoderm | 9.02e-13 | 64 |
neural plate | 9.02e-13 | 64 |
presumptive neural plate | 9.02e-13 | 64 |
brain | 2.85e-12 | 47 |
future brain | 2.85e-12 | 47 |
diencephalon | 3.41e-12 | 10 |
future diencephalon | 3.41e-12 | 10 |
pituitary gland | 3.51e-12 | 8 |
gland of diencephalon | 3.51e-12 | 8 |
neuroendocrine gland | 3.51e-12 | 8 |
ectoderm-derived structure | 2.17e-11 | 95 |
ectoderm | 2.17e-11 | 95 |
presumptive ectoderm | 2.17e-11 | 95 |
pre-chordal neural plate | 3.13e-11 | 49 |
regional part of brain | 3.51e-11 | 46 |
gray matter | 4.69e-11 | 34 |
ecto-epithelium | 2.87e-10 | 73 |
regional part of spinal cord | 2.45e-09 | 5 |
gray matter of spinal cord | 2.45e-09 | 5 |
structure with developmental contribution from neural crest | 8.93e-09 | 92 |
spinal cord | 1.15e-07 | 6 |
dorsal region element | 1.15e-07 | 6 |
dorsum | 1.15e-07 | 6 |