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FFCP PHASE1:Mm9::chr12:86939657..86939685,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=81703
|EntrezGene=81703
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P97875
|UniProt=P97875
|association_with_transcript=-369bp_to_NM_001205052,uc007ohb.1_5end
|association_with_transcript=-369bp_to_NM_001205052,uc007ohb.1_5end
|cluster_id=chr12:86939657..86939685,+
|description=CAGE_peak_6_at_Jdp2_5end
|description=CAGE_peak_6_at_Jdp2_5end
|id=chr12:86939657..86939685,+
|id=chr12:86939657..86939685,+
|ontology_enrichment_celltype=CL:0000221!1.42e-07!44;CL:0000133!1.42e-07!44;CL:0000055!1.60e-07!50;CL:0002319!2.04e-07!43;CL:0000393!4.77e-07!39;CL:0000211!4.77e-07!39
|ontology_enrichment_celltype=CL:0000221!1.42e-07!44;CL:0000133!1.42e-07!44;CL:0000055!1.60e-07!50;CL:0002319!2.04e-07!43;CL:0000393!4.77e-07!39;CL:0000211!4.77e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,8.50e-16,23;CL:0000337,8.50e-16,23;CL:0002319,2.88e-10,43;CL:0000221,6.22e-10,44;CL:0000133,6.22e-10,44;CL:0000540,7.17e-10,33;CL:0000047,7.17e-10,33;CL:0000031,7.17e-10,33;CL:0000404,7.17e-10,33;CL:0000393,4.24e-09,39;CL:0000211,4.24e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.76e-15!102;UBERON:0000924!4.76e-15!102;UBERON:0006601!4.76e-15!102;UBERON:0001017!4.93e-15!73;UBERON:0005743!4.93e-15!73;UBERON:0000073!3.31e-14!75;UBERON:0001016!3.31e-14!75;UBERON:0000033!2.43e-12!63;UBERON:0001049!4.41e-11!52;UBERON:0005068!4.41e-11!52;UBERON:0006241!4.41e-11!52;UBERON:0007135!4.41e-11!52;UBERON:0002346!7.38e-11!71;UBERON:0003075!7.38e-11!71;UBERON:0007284!7.38e-11!71;UBERON:0000955!3.03e-10!50;UBERON:0006238!3.03e-10!50;UBERON:0002616!8.60e-10!49;UBERON:0002020!1.37e-09!34;UBERON:0003076!1.23e-07!12;UBERON:0003057!1.23e-07!12;UBERON:0002791!4.52e-07!29;UBERON:0003528!4.52e-07!29;UBERON:0001893!4.52e-07!29;UBERON:0003056!8.65e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.29e-22,54;UBERON:0001017,8.19e-22,73;UBERON:0001016,5.26e-21,75;UBERON:0004121,4.62e-20,95;UBERON:0000924,4.62e-20,95;UBERON:0006601,4.62e-20,95;UBERON:0001049,6.87e-18,52;UBERON:0005068,6.87e-18,52;UBERON:0006241,6.87e-18,52;UBERON:0007135,6.87e-18,52;UBERON:0002346,5.03e-16,64;UBERON:0003075,5.03e-16,64;UBERON:0007284,5.03e-16,64;UBERON:0010371,7.62e-16,73;UBERON:0003076,4.85e-15,12;UBERON:0003057,4.85e-15,12;UBERON:0000955,1.06e-13,47;UBERON:0006238,1.06e-13,47;UBERON:0002616,1.04e-12,46;UBERON:0002020,2.82e-12,34;UBERON:0010314,6.29e-11,92;UBERON:0001948,3.14e-09,5;UBERON:0002315,3.14e-09,5;UBERON:0004733,5.76e-09,6;UBERON:0004732,5.76e-09,6;UBERON:0002028,5.76e-09,6;UBERON:0007277,5.76e-09,6;UBERON:0002420,9.29e-09,8;UBERON:0007245,9.29e-09,8;UBERON:0010009,9.29e-09,8;UBERON:0010011,9.29e-09,8;UBERON:0000454,9.29e-09,8;UBERON:0003080,1.26e-07,40;UBERON:0002240,1.27e-07,6;UBERON:0005174,1.27e-07,6;UBERON:0001137,1.27e-07,6;UBERON:0003056,1.65e-07,49;UBERON:0003528,4.46e-07,29;UBERON:0002791,4.46e-07,29;UBERON:0001893,4.46e-07,29
|phase1_expression=0.640595388419176,0.348975407639361,0,0.30246421130683,0,0.503637815735669,0,0,0,0,0.34243593645101,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.595303031057488,0,0,0,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,1.0470474879476,0,1.36609096991689,0,0.377690453926732,0.304130793658544,0,1.56478268869608,0.218025156380447,0.878744730937887,0.194429899074283,0.419959264876088,1.43752564364972,0.335565212115473,0,0.336093799142464,0.514518872071894,0.573066879877513,2.06268836910977,1.41621522601718,2.11596391708813,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0,0.135005938331691,0.420649922702764,1.71390590642282,1.98781686856452,0.244981598429908,0.0958454710182364,0,1.10115880999389,3.06449611404451,3.84016333140609,1.45074916503213,1.55528994124096,2.6045668527838,3.90856198601933,0.56276261003168,2.13917546887534,1.76777151284201,1.42371680799103,1.3047961207771,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0.681721290312231,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.517875767294343,0.29688427812965,0,0.608930956624282,0.230615497256059,0,0,0.376999773989026,0,0.722996784599558,0,0.647067399789637,1.10420759230197,0.969750506270444,0,2.63502717310392,4.1889341362691,0.255457055208591,0.718890747035522,0,0.381210681219194,2.69623150928681,2.28750301409313,0.376963056338593,0.695297280769106,0.767146371990992,3.1168206683934,1.94689515681309,0.101839363850316,0.248813941220186,0,0.631325567659422,0,0.689706313300419,0.180062129805349,0.150704817835715,1.02054748726992,0.384341160854549,0.468508622798644,3.10444044886819,0,0.189106080167819,0.527853372491847,0,0.834141747676794,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0.536546802799238,0.350296027101508,0,0.492502392237286,0.324275238183423,0.438599962275997,1.09775057645525,0.536825675041487,1.47202963994889,0.720332286654991,0,0,0.213288250535234,0,0,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0.509235257325564,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0.655453258862952,0.345369963731791,0.144649058581512,0,0,2.95058563811422,1.37968373152366,3.21101179975584,2.81308047821288,0.163934945376675,0.504941854408746,0.94652465824877,0,0.430846795465598,0.477937595905104,0,0.849229592366497,0,0.292255857911312,0.790575555893047,1.28528526568723,0.425820255624806,0.178065603667255,0,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0.441056796109924,0.16488625294148,0.484393280087717,0.120625849856312,0.238744688006273,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0.228778173206523,2.03974115992626,1.95932033253121,1.24379976423981,0,0.158167996790568,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0.194451188344048,0,0,0,0.2604087696879,0.419437377702843,0.241584120826006,0,0,0.608175645870493,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0.680191150845634,0.221985953374065,0.179427713218951,0,0.386379188064381,0.187682475451182,0.36630324853453,0.214368379079066,0,1.12950368523413,0.920650473014354,2.29158205375759,0.515559547031063,2.05524755931193,0,0.675022500231806,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0,0,0.628839487883947,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,0,0,0.377252682772152,0.37456602987953,0.192075457214608,0,0.476293691283074,0.811190281613988,0.192909220463705,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0.423073039458382,0.73171189149109,0,0.407412341537585,0.561142271657738,0.711810108745045,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,1.24905288968973,0.467863216890817,0.214871054048298,1.3390183244819,1.10295709559758,0.927471342481686
|phase1_expression=0.640595388419176,0.348975407639361,0,0.30246421130683,0,0.503637815735669,0,0,0,0,0.34243593645101,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.595303031057488,0,0,0,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,1.0470474879476,0,1.36609096991689,0,0.377690453926732,0.304130793658544,0,1.56478268869608,0.218025156380447,0.878744730937887,0.194429899074283,0.419959264876088,1.43752564364972,0.335565212115473,0,0.336093799142464,0.514518872071894,0.573066879877513,2.06268836910977,1.41621522601718,2.11596391708813,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0,0.135005938331691,0.420649922702764,1.71390590642282,1.98781686856452,0.244981598429908,0.0958454710182364,0,1.10115880999389,3.06449611404451,3.84016333140609,1.45074916503213,1.55528994124096,2.6045668527838,3.90856198601933,0.56276261003168,2.13917546887534,1.76777151284201,1.42371680799103,1.3047961207771,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0.681721290312231,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.517875767294343,0.29688427812965,0,0.608930956624282,0.230615497256059,0,0,0.376999773989026,0,0.722996784599558,0,0.647067399789637,1.10420759230197,0.969750506270444,0,2.63502717310392,4.1889341362691,0.255457055208591,0.718890747035522,0,0.381210681219194,2.69623150928681,2.28750301409313,0.376963056338593,0.695297280769106,0.767146371990992,3.1168206683934,1.94689515681309,0.101839363850316,0.248813941220186,0,0.631325567659422,0,0.689706313300419,0.180062129805349,0.150704817835715,1.02054748726992,0.384341160854549,0.468508622798644,3.10444044886819,0,0.189106080167819,0.527853372491847,0,0.834141747676794,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0.536546802799238,0.350296027101508,0,0.492502392237286,0.324275238183423,0.438599962275997,1.09775057645525,0.536825675041487,1.47202963994889,0.720332286654991,0,0,0.213288250535234,0,0,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0.509235257325564,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0.655453258862952,0.345369963731791,0.144649058581512,0,0,2.95058563811422,1.37968373152366,3.21101179975584,2.81308047821288,0.163934945376675,0.504941854408746,0.94652465824877,0,0.430846795465598,0.477937595905104,0,0.849229592366497,0,0.292255857911312,0.790575555893047,1.28528526568723,0.425820255624806,0.178065603667255,0,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0.441056796109924,0.16488625294148,0.484393280087717,0.120625849856312,0.238744688006273,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0.228778173206523,2.03974115992626,1.95932033253121,1.24379976423981,0,0.158167996790568,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0.194451188344048,0,0,0,0.2604087696879,0.419437377702843,0.241584120826006,0,0,0.608175645870493,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0.680191150845634,0.221985953374065,0.179427713218951,0,0.386379188064381,0.187682475451182,0.36630324853453,0.214368379079066,0,1.12950368523413,0.920650473014354,2.29158205375759,0.515559547031063,2.05524755931193,0,0.675022500231806,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0,0,0.628839487883947,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,0,0,0.377252682772152,0.37456602987953,0.192075457214608,0,0.476293691283074,0.811190281613988,0.192909220463705,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0.423073039458382,0.73171189149109,0,0.407412341537585,0.561142271657738,0.711810108745045,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,1.24905288968973,0.467863216890817,0.214871054048298,1.3390183244819,1.10295709559758,0.927471342481686
|short_description=p6@Jdp2
|short_description=p6@Jdp2
}}
}}

Latest revision as of 22:53, 26 September 2015

Short description:p6@Jdp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Jdp2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -369bp_to_NM_001205052, uc007ohb.1_5end
EntrezGene:Jdp2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Jdp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.50e-1623
neuroblast (sensu Vertebrata)8.50e-1623
neural cell2.88e-1043
ectodermal cell6.22e-1044
neurectodermal cell6.22e-1044
neuron7.17e-1033
neuronal stem cell7.17e-1033
neuroblast7.17e-1033
electrically signaling cell7.17e-1033
electrically responsive cell4.24e-0939
electrically active cell4.24e-0939

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.29e-2254
central nervous system8.19e-2273
nervous system5.26e-2175
ectoderm-derived structure4.62e-2095
ectoderm4.62e-2095
presumptive ectoderm4.62e-2095
neural tube6.87e-1852
neural rod6.87e-1852
future spinal cord6.87e-1852
neural keel6.87e-1852
neurectoderm5.03e-1664
neural plate5.03e-1664
presumptive neural plate5.03e-1664
ecto-epithelium7.62e-1673
posterior neural tube4.85e-1512
chordal neural plate4.85e-1512
brain1.06e-1347
future brain1.06e-1347
regional part of brain1.04e-1246
gray matter2.82e-1234
structure with developmental contribution from neural crest6.29e-1192
regional part of spinal cord3.14e-095
gray matter of spinal cord3.14e-095
segmental subdivision of hindbrain5.76e-096
segmental subdivision of nervous system5.76e-096
hindbrain5.76e-096
presumptive hindbrain5.76e-096
basal ganglion9.29e-098
nuclear complex of neuraxis9.29e-098
aggregate regional part of brain9.29e-098
collection of basal ganglia9.29e-098
cerebral subcortex9.29e-098
anterior neural tube1.26e-0740
spinal cord1.27e-076
dorsal region element1.27e-076
dorsum1.27e-076
pre-chordal neural plate1.65e-0749
brain grey matter4.46e-0729
regional part of telencephalon4.46e-0729
telencephalon4.46e-0729
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