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FFCP PHASE1:Mm9::chr4:49072128..49072202,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:49072128..49072202,+
|DHSsupport=NA
|short_description=p1@E130309F12Rik
|DPIdataset=NA
|description=CAGE_peak_1_at_E130309F12Rik_5end
|association_with_transcript=0bp_to_ENSMUST00000076670,ENSMUST00000137884_5end
|EntrezGene=272031
|EntrezGene=272031
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q8BFZ2
|UniProt=Q8BFZ2
|association_with_transcript=0bp_to_ENSMUST00000076670,ENSMUST00000137884_5end
|cluster_id=chr4:49072128..49072202,+
|description=CAGE_peak_1_at_E130309F12Rik_5end
|id=chr4:49072128..49072202,+
|ontology_enrichment_celltype=CL:0000117!2.89e-12!23;CL:0000337!2.89e-12!23;CL:0000540!3.09e-09!33;CL:0000047!3.09e-09!33;CL:0000031!3.09e-09!33;CL:0000404!3.09e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-13,23;CL:0000337,3.34e-13,23;CL:0000540,1.09e-08,33;CL:0000047,1.09e-08,33;CL:0000031,1.09e-08,33;CL:0000404,1.09e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!4.38e-16!49;UBERON:0002346!3.18e-15!71;UBERON:0003075!3.18e-15!71;UBERON:0007284!3.18e-15!71;UBERON:0001049!9.14e-15!52;UBERON:0005068!9.14e-15!52;UBERON:0006241!9.14e-15!52;UBERON:0007135!9.14e-15!52;UBERON:0001017!1.23e-14!73;UBERON:0005743!1.23e-14!73;UBERON:0000073!7.15e-14!75;UBERON:0001016!7.15e-14!75;UBERON:0002020!7.83e-14!34;UBERON:0000033!1.48e-13!63;UBERON:0003080!8.98e-13!40;UBERON:0002780!1.78e-12!39;UBERON:0001890!1.78e-12!39;UBERON:0006240!1.78e-12!39;UBERON:0000955!5.32e-12!50;UBERON:0006238!5.32e-12!50;UBERON:0002616!1.72e-11!49;UBERON:0004121!1.86e-11!102;UBERON:0000924!1.86e-11!102;UBERON:0006601!1.86e-11!102;UBERON:0002791!1.34e-10!29;UBERON:0003528!1.34e-10!29;UBERON:0001893!1.34e-10!29;UBERON:0000468!2.81e-10!333;UBERON:0000922!2.94e-08!328;UBERON:0000956!2.83e-07!21;UBERON:0001869!2.83e-07!21;UBERON:0000203!2.83e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.16e-17,64;UBERON:0003075,8.16e-17,64;UBERON:0007284,8.16e-17,64;UBERON:0003056,1.04e-16,49;UBERON:0001049,4.05e-15,52;UBERON:0005068,4.05e-15,52;UBERON:0006241,4.05e-15,52;UBERON:0007135,4.05e-15,52;UBERON:0000073,7.08e-15,54;UBERON:0002020,1.08e-14,34;UBERON:0001017,6.34e-14,73;UBERON:0003080,1.46e-13,40;UBERON:0010314,2.01e-13,92;UBERON:0002780,3.07e-13,39;UBERON:0001890,3.07e-13,39;UBERON:0006240,3.07e-13,39;UBERON:0010371,4.64e-13,73;UBERON:0001016,6.69e-13,75;UBERON:0000955,5.39e-12,47;UBERON:0006238,5.39e-12,47;UBERON:0004121,8.08e-12,95;UBERON:0000924,8.08e-12,95;UBERON:0006601,8.08e-12,95;UBERON:0002616,1.89e-11,46;UBERON:0003528,3.43e-11,29;UBERON:0002791,3.43e-11,29;UBERON:0001893,3.43e-11,29;UBERON:0000956,1.36e-07,21;UBERON:0001869,1.36e-07,21;UBERON:0000203,1.36e-07,21
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0.515672092277442,48.1513176845843,44.9642332381228,38.0298842103708,0,0,0,0,0,3.59520132622086,3.84218305321555,44.3791540680284,58.7275831742854,48.5850660721692,25.7085885963423,28.4920417827581,23.1507610516263,26.1658135879785,23.8996884518605,1.10115880999389,6.2566795661742,4.14737639791857,45.5007692669169,54.0691973690241,52.6122504262328,3.07101298901519,4.50210088025344,6.1119299110724,47.4352022612605,50.8266900452797,65.9854038221564,0.075726193333184,0.0755715601067855,6.95674772884027,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0.22836775943812,2.07150306917737,0,1.56136794089522,1.52232739156071,1.84492397804847,0.904335843315735,1.88141931417128,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0.878342391034642,1.04723353406728,0.766371165625774,0,0,0,6.74057877321702,20.1300265240196,37.6963056338593,6.60532416730651,4.85859368927628,8.51930982694196,10.707923362472,1.2220723662038,0,0.252722758433675,0.841767423545896,5.07469727554544,10.3455946995063,18.7264614997563,26.2226383034144,24.7652856910833,24.2134931338366,18.7403449119458,3.3631438196072,5.17363183038821,4.53854592402766,6.51019159406611,4.3839146485515,5.83899223373756,4.87553033131033,4.7329891373827,2.38841120182192,0,0,0,2.07125772535502,2.57978665979206,3.78130329068131,4.97163944728941,6.49321964766433,9.87309522479221,13.7195027402741,9.38956904898667,10.8591768401468,6.7469538464527,1.47750717671186,0.162137619091711,0.292399974850665,0.878200461164203,0.268412837520744,6.30869845692382,48.5709770430223,0.330418782983798,0,4.90562976231038,5.57368012465052,2.31961430379768,1.81515172161008,2.44615848229357,0.951128130562796,0,0.988193728344065,0.754005626400808,0.994782360205754,0.38992817423824,0.898819408654221,0,0.199141273254367,4.55202962287396,5.71242563048644,5.63538678365402,9.16430975303914,6.59438456369928,4.41855665309007,5.12215950706484,1.62371162777562,1.8839847340965,1.48076596706161,0,0.83422552858047,0.196558995113203,0,0.202860121388503,0,0.50925170356284,2.87696137450811,2.7562988551756,6.04035109013779,12.9391385874619,4.46569137202204,2.80833905803104,2.52578877947112,0.358794827043824,1.4473305640901,0,2.27389694124582,3.09633455239849,1.69745085775188,1.87752198630802,1.67506257441816,0.952174563544055,0.195133647857799,0.315270288212382,0.44292937929755,0,0,0.172684981865896,0,0,0,0,0,3.53211297973142,4.68846746368813,0,0,0.631016438832513,1.17131623288992,0.215423397732799,3.34556317133573,2.22798674082394,1.98153571552183,1.21443210502468,0.292255857911312,0.790575555893047,14.7807805554031,0,1.95872164033981,0.81443479676788,0.824850614862677,5.30980553359851,2.91336763385978,2.72091201268276,6.97838795096823,4.13422650033082,7.37844355065426,4.13485269069154,7.99774204850512,6.77345018930971,4.10847785316561,4.21674434299995,8.25084345985495,3.06395645178409,5.94201610303324,4.2688365648309,5.5727629108214,6.91626911204867,4.45922044005176,5.92376474167636,2.74018454203139,0,0,0,0,1.93757312035087,0.482503399425247,0.119372344003136,0,0.291480836629851,8.15871328846243,0.170870880797853,5.15967169908056,2.03713980106683,1.13021074202815,0.820165366326151,0.228778173206523,0,0,0,0,3.95419991976419,2.64315307264903,2.91614420218863,1.67270636811575,1.52853794622324,1.61837215661785,1.57041565878138,0,0.129614973291793,0,0,1.64468200648377,1.32366792365678,4.4723773319131,3.09983576346555,4.89972763923257,4.10750335260139,3.1249052362548,1.46803082195995,0,0,0,1.41907650703115,0.924398614483445,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0,0.443971906748129,0,0,0.19318959403219,0,0.183151624267265,0,0,19.2015626489803,16.1113832777512,12.6037012956667,13.2326950404639,4.7955776383945,6.0431511791176,6.07520250208625,4.95353323546643,5.43770890781046,1.03552062350364,5.91587881229807,10.7736715818278,9.39034831647738,9.72426868273176,7.1268475293514,4.41224420280034,9.33436256766784,7.62329711783909,5.77654577265267,8.84440241173291,8.11133759648767,8.67681170375951,8.80230170216895,9.09157164149144,9.41941690872058,10.4784612082276,8.92309309775387,8.48800570040302,4.53294490883637,8.68473628792944,11.3146853287187,9.22874192028555,10.7296285476294,10.7556348307923,7.0582035311498,8.96914843651771,5.85369513192872,9.73357932320019,7.74083448921412,7.2948495315506,8.18581625056802,8.0773675547962,6.54769669071503,10.5357052006457,6.55882477335881,16.7373087218424,7.01794825336225,7.95022899978704,3.06061331310149,1.10295709559758,0.231867835620421
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0.515672092277442,48.1513176845843,44.9642332381228,38.0298842103708,0,0,0,0,0,3.59520132622086,3.84218305321555,44.3791540680284,58.7275831742854,48.5850660721692,25.7085885963423,28.4920417827581,23.1507610516263,26.1658135879785,23.8996884518605,1.10115880999389,6.2566795661742,4.14737639791857,45.5007692669169,54.0691973690241,52.6122504262328,3.07101298901519,4.50210088025344,6.1119299110724,47.4352022612605,50.8266900452797,65.9854038221564,0.075726193333184,0.0755715601067855,6.95674772884027,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0.22836775943812,2.07150306917737,0,1.56136794089522,1.52232739156071,1.84492397804847,0.904335843315735,1.88141931417128,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0.878342391034642,1.04723353406728,0.766371165625774,0,0,0,6.74057877321702,20.1300265240196,37.6963056338593,6.60532416730651,4.85859368927628,8.51930982694196,10.707923362472,1.2220723662038,0,0.252722758433675,0.841767423545896,5.07469727554544,10.3455946995063,18.7264614997563,26.2226383034144,24.7652856910833,24.2134931338366,18.7403449119458,3.3631438196072,5.17363183038821,4.53854592402766,6.51019159406611,4.3839146485515,5.83899223373756,4.87553033131033,4.7329891373827,2.38841120182192,0,0,0,2.07125772535502,2.57978665979206,3.78130329068131,4.97163944728941,6.49321964766433,9.87309522479221,13.7195027402741,9.38956904898667,10.8591768401468,6.7469538464527,1.47750717671186,0.162137619091711,0.292399974850665,0.878200461164203,0.268412837520744,6.30869845692382,48.5709770430223,0.330418782983798,0,4.90562976231038,5.57368012465052,2.31961430379768,1.81515172161008,2.44615848229357,0.951128130562796,0,0.988193728344065,0.754005626400808,0.994782360205754,0.38992817423824,0.898819408654221,0,0.199141273254367,4.55202962287396,5.71242563048644,5.63538678365402,9.16430975303914,6.59438456369928,4.41855665309007,5.12215950706484,1.62371162777562,1.8839847340965,1.48076596706161,0,0.83422552858047,0.196558995113203,0,0.202860121388503,0,0.50925170356284,2.87696137450811,2.7562988551756,6.04035109013779,12.9391385874619,4.46569137202204,2.80833905803104,2.52578877947112,0.358794827043824,1.4473305640901,0,2.27389694124582,3.09633455239849,1.69745085775188,1.87752198630802,1.67506257441816,0.952174563544055,0.195133647857799,0.315270288212382,0.44292937929755,0,0,0.172684981865896,0,0,0,0,0,3.53211297973142,4.68846746368813,0,0,0.631016438832513,1.17131623288992,0.215423397732799,3.34556317133573,2.22798674082394,1.98153571552183,1.21443210502468,0.292255857911312,0.790575555893047,14.7807805554031,0,1.95872164033981,0.81443479676788,0.824850614862677,5.30980553359851,2.91336763385978,2.72091201268276,6.97838795096823,4.13422650033082,7.37844355065426,4.13485269069154,7.99774204850512,6.77345018930971,4.10847785316561,4.21674434299995,8.25084345985495,3.06395645178409,5.94201610303324,4.2688365648309,5.5727629108214,6.91626911204867,4.45922044005176,5.92376474167636,2.74018454203139,0,0,0,0,1.93757312035087,0.482503399425247,0.119372344003136,0,0.291480836629851,8.15871328846243,0.170870880797853,5.15967169908056,2.03713980106683,1.13021074202815,0.820165366326151,0.228778173206523,0,0,0,0,3.95419991976419,2.64315307264903,2.91614420218863,1.67270636811575,1.52853794622324,1.61837215661785,1.57041565878138,0,0.129614973291793,0,0,1.64468200648377,1.32366792365678,4.4723773319131,3.09983576346555,4.89972763923257,4.10750335260139,3.1249052362548,1.46803082195995,0,0,0,1.41907650703115,0.924398614483445,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0,0.443971906748129,0,0,0.19318959403219,0,0.183151624267265,0,0,19.2015626489803,16.1113832777512,12.6037012956667,13.2326950404639,4.7955776383945,6.0431511791176,6.07520250208625,4.95353323546643,5.43770890781046,1.03552062350364,5.91587881229807,10.7736715818278,9.39034831647738,9.72426868273176,7.1268475293514,4.41224420280034,9.33436256766784,7.62329711783909,5.77654577265267,8.84440241173291,8.11133759648767,8.67681170375951,8.80230170216895,9.09157164149144,9.41941690872058,10.4784612082276,8.92309309775387,8.48800570040302,4.53294490883637,8.68473628792944,11.3146853287187,9.22874192028555,10.7296285476294,10.7556348307923,7.0582035311498,8.96914843651771,5.85369513192872,9.73357932320019,7.74083448921412,7.2948495315506,8.18581625056802,8.0773675547962,6.54769669071503,10.5357052006457,6.55882477335881,16.7373087218424,7.01794825336225,7.95022899978704,3.06061331310149,1.10295709559758,0.231867835620421
|short_description=p1@E130309F12Rik
}}
}}

Latest revision as of 01:57, 27 September 2015

Short description:p1@E130309F12Rik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_E130309F12Rik_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000076670, ENSMUST00000137884_5end
EntrezGene:E130309F12Rik
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@E130309F12Rik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C348.15
Mouse Granule cells, donor2.CNhs12357.11731-123E344.96
Mouse Granule cells, donor3.CNhs12108.11636-122C738.03
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D544.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F558.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D948.59
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F226.17
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D623.90
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D445.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F454.07
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D852.61
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D647.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F650.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E165.99
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F137.70
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F28.52
diencephalon, neonate N30.CNhs11201.1388-42B210.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C65.07
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C918.73
eyeball, embryo E17.CNhs11023.1261-18D426.22
eyeball, neonate N00.CNhs11207.633-15C624.77
eyeball, neonate N01.CNhs11140.1532-43E724.21
eyeball, neonate N02.CNhs11205.1551-44G818.74
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E26.51
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C86.49
heart, embryo E16.CNhs11021.457-17C69.87
heart, embryo E17.CNhs11025.479-18E513.72
heart, embryo E18.CNhs11030.1283-20G39.39
heart, neonate N00.CNhs11213.639-21E310.86
heart, neonate N03.CNhs11221.1349-25I26.75
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G148.57
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F85.71
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I29.16
kidney, embryo E18.CNhs11001.1288-20C76.59
kidney, neonate N00.CNhs11214.646-21G74.42
kidney, neonate N10.CNhs11206.758-6D55.12
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G26.04
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I914.78
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E56.98
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E65.94
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B96.92
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I85.92
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H29.39
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.92
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.97
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.54
whole body, embryo E17.5.CNhs10513.490-9F96.56
whole body, embryo E17.CNhs10517.475-3I516.74
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C27.95
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.34e-1323
neuroblast (sensu Vertebrata)3.34e-1323
neuron1.09e-0833
neuronal stem cell1.09e-0833
neuroblast1.09e-0833
electrically signaling cell1.09e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm8.16e-1764
neural plate8.16e-1764
presumptive neural plate8.16e-1764
pre-chordal neural plate1.04e-1649
neural tube4.05e-1552
neural rod4.05e-1552
future spinal cord4.05e-1552
neural keel4.05e-1552
regional part of nervous system7.08e-1554
gray matter1.08e-1434
central nervous system6.34e-1473
anterior neural tube1.46e-1340
structure with developmental contribution from neural crest2.01e-1392
regional part of forebrain3.07e-1339
forebrain3.07e-1339
future forebrain3.07e-1339
ecto-epithelium4.64e-1373
nervous system6.69e-1375
brain5.39e-1247
future brain5.39e-1247
ectoderm-derived structure8.08e-1295
ectoderm8.08e-1295
presumptive ectoderm8.08e-1295
regional part of brain1.89e-1146
brain grey matter3.43e-1129
regional part of telencephalon3.43e-1129
telencephalon3.43e-1129
cerebral cortex1.36e-0721
cerebral hemisphere1.36e-0721
pallium1.36e-0721
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