FFCP PHASE1:Mm9::chr1:44176296..44176364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=246229 | |EntrezGene=246229 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8CBX9 | |UniProt=Q8CBX9 | ||
|association_with_transcript=-448bp_to_ENSMUST00000114709,NM_144558,uc007awf.2_5end | |association_with_transcript=-448bp_to_ENSMUST00000114709,NM_144558,uc007awf.2_5end | ||
|cluster_id=chr1:44176296..44176364,+ | |||
|description=CAGE_peak_1_at_Bivm_5end | |description=CAGE_peak_1_at_Bivm_5end | ||
|id=chr1:44176296..44176364,+ | |id=chr1:44176296..44176364,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.73e-10!63;UBERON:0000955!9.52e-10!50;UBERON:0006238!9.52e-10!50;UBERON:0001049!1.68e-09!52;UBERON:0005068!1.68e-09!52;UBERON:0006241!1.68e-09!52;UBERON:0007135!1.68e-09!52;UBERON:0002616!1.89e-09!49;UBERON:0002346!2.76e-09!71;UBERON:0003075!2.76e-09!71;UBERON:0007284!2.76e-09!71;UBERON:0004111!4.56e-09!122;UBERON:0003056!7.06e-09!49;UBERON:0003080!1.63e-08!40;UBERON:0000025!1.89e-08!114;UBERON:0002780!3.94e-08!39;UBERON:0001890!3.94e-08!39;UBERON:0006240!3.94e-08!39;UBERON:0004121!1.61e-07!102;UBERON:0000924!1.61e-07!102;UBERON:0006601!1.61e-07!102;UBERON:0002020!7.25e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.22e-09,54;UBERON:0001049,1.97e-09,52;UBERON:0005068,1.97e-09,52;UBERON:0006241,1.97e-09,52;UBERON:0007135,1.97e-09,52;UBERON:0000955,4.33e-09,47;UBERON:0006238,4.33e-09,47;UBERON:0004111,4.52e-09,122;UBERON:0003056,7.00e-09,49;UBERON:0002346,8.11e-09,64;UBERON:0003075,8.11e-09,64;UBERON:0007284,8.11e-09,64;UBERON:0002616,8.51e-09,46;UBERON:0010314,1.39e-08,92;UBERON:0003080,1.62e-08,40;UBERON:0000025,1.87e-08,114;UBERON:0002780,3.91e-08,39;UBERON:0001890,3.91e-08,39;UBERON:0006240,3.91e-08,39;UBERON:0010371,4.27e-08,73;UBERON:0004121,5.45e-07,95;UBERON:0000924,5.45e-07,95;UBERON:0006601,5.45e-07,95;UBERON:0002020,7.21e-07,34 | |||
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|phase1_expression=4.32401887182944,0.697950815278722,2.72999543633722,0.90739263392049,1.00179145989269,3.52546471014969,2.56973904655078,1.67860320474049,0.281577444303333,0,0.856089841127525,0.239316476986009,0.342401459862411,0.524522414513984,1.33243904726265,1.21485160433896,0.699561878128147,0.788655413395594,0.274228867211478,0.42438965179803,2.97651515528744,4.0709289992363,5.74639536105658,3.99981056983517,2.2940928106717,1.72269589234506,3.4460959692726,1.72376986148711,2.85035129184561,2.01624103807945,3.54768817048488,1.27006134691926,0,15.8481681015439,2.59966457776147,2.99222361645286,1.83752420636132,0.418531630736908,0,1.0470474879476,0,0,0,7.05022180663233,7.40051597902456,8.9937908559224,0.782391344348039,0.872100625521786,1.09843091367236,1.94429899074283,3.3596741190087,0,0.167782606057736,0,0.336093799142464,3.60163210450326,5.15760191889762,4.12537673821954,3.84401275633236,4.23192783417626,3.1691570175309,2.03306719241479,0.889294796111139,1.7997994345628,0,1.4209602298922,1.49800055259202,1.15265491596466,7.8804105354443,7.1553147315796,6.09942387919008,4.28476476605705,3.97563373712904,7.10446635446733,5.07980996396653,4.5960939330501,4.40463523997555,5.87361755191863,5.83704826373725,5.27545150920775,4.94033275453012,8.33461392890816,3.90856198601933,5.6276261003168,4.27835093775068,5.00868595305235,3.84403538157578,7.64237727883732,3.02904773332736,4.98772296704784,3.18850937571846,0,0,3.2382191498269,4.54843492213368,3.58421509677868,3.5111105032938,9.20323741921512,7.01422212427746,6.36011234118612,4.50698943285378,6.41632387071589,10.1922095882658,7.11066703153331,3.89683873820185,2.28023878927589,2.02209778005913,3.65388415100992,4.14300613835475,5.34391700633369,3.99016251562112,2.13125834818499,4.61230994512117,5.42601505989441,5.76184664964954,5.27799683584637,5.6854842578906,4.48258006451726,2.65383165584962,5.01477234836968,1.98757366614354,2.90925151881133,1.86391761218122,6.73395833126558,8.58731497935166,3.0654846625031,1.1981512450592,1.79970819298022,1.52484272487678,6.44099749440738,6.8625090422794,12.8167439155122,5.56237824615285,6.90431734791892,5.61027720310812,8.92326946872667,4.88828946481518,3.35898820647251,3.79084137650512,3.78795340595653,5.33493816147085,4.36813998423599,5.22180176435513,4.21973489940002,6.25935792192216,5.12454881139399,3.65436725782942,4.65666067330228,5.17363183038821,6.24050064553804,7.38994721488585,4.82230611340665,5.00485048606076,5.92028683087683,5.35033554660653,2.9855140022774,0.702213187313235,1.54408744268829,0.852490498186778,2.48550927042602,3.51789089971644,3.06105504483725,4.97163944728941,4.13204886669548,6.01641740260775,5.58081467400979,2.95100741539581,4.78737903705395,3.45575684818309,3.77585167381919,4.45878452502207,2.92399974850665,7.46470391989572,2.81833479396781,6.9395683026162,13.0688857721691,1.32167513193519,2.3800550999719,5.11891801284562,6.0381534683714,5.15469845288373,4.84040459096022,4.66993892074228,3.61428689613862,4.74529061544512,4.28217282282428,4.52403375840485,6.76452004939913,4.09424582950152,4.49409704327111,4.75503709724327,3.18626037206988,3.22435431620239,4.34144347916969,4.50830942692322,3.25842124552503,5.04276466635827,2.73529697572242,3.85742876457969,3.39503340353085,2.66897837330337,5.05928372079382,3.85388415213294,3.17005700860579,3.53806191203765,2.02375901146368,2.02860121388503,4.3411888755435,2.5462585178142,2.30156909960649,2.91843408195064,1.92192989231657,7.18841032636773,4.09355042435354,4.05648975048929,4.79899868099512,6.27890947326693,5.78932225636041,3.69506380333209,3.97931964718018,4.88894929326078,5.94107800213158,4.69380496577004,5.69521275302174,5.71304738126433,3.70753930929818,6.9359463406724,6.64394068946325,4.62418829106713,5.40748938561935,6.21665934717224,3.61622646453779,1.50791283939272,2.71952841909355,1.47529281905711,4.41498794087572,6.74312477948726,9.02529986759964,9.18035694109382,4.54447668967871,1.89304931649754,2.34263246577983,3.87762115919038,5.01834475700359,6.01556420022464,5.09537755419898,3.64329631507405,2.92255857911312,2.37172666767914,5.78378369559253,3.69044221541498,4.27357448801413,7.00413925220377,6.76377504187395,5.30980553359851,4.12727081463468,3.02323556964751,2.64047111658257,2.06711325016541,3.3817866273832,5.68542244970086,6.18007340111759,3.56497378384721,3.79244109522979,1.05418608574999,2.06271086496374,5.7874732978144,6.12207719706455,2.8458910432206,4.92975180572662,4.96552654198366,4.28085162244969,6.91105886528908,4.56697423671899,3.28540391289194,8.47328283455281,3.08739757276947,3.95727007059552,5.48979050766079,5.30753739367772,2.74556391207214,3.28281799490123,4.37221254944776,6.48988557036784,1.70870880797853,2.68302928352189,2.96311243791539,1.13021074202815,1.0935538217682,0.915112692826091,1.01987057996313,1.53946597556024,2.62579950228405,2.86401185404534,5.53587988766987,6.30290348093231,4.64422965533745,2.29997125615916,4.58561383866973,5.66430254816247,6.19900917940019,6.28214260761671,4.79575401179634,3.10669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| ||
|short_description=p1@Bivm | |short_description=p1@Bivm | ||
}} | }} |
Latest revision as of 04:16, 27 September 2015
Short description: | p1@Bivm |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bivm_5end |
Coexpression cluster: | NA |
Association with transcript: | -448bp_to_ENSMUST00000114709, NM_144558, uc007awf.2_5end |
EntrezGene: | Bivm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.22e-09 | 54 |
neural tube | 1.97e-09 | 52 |
neural rod | 1.97e-09 | 52 |
future spinal cord | 1.97e-09 | 52 |
neural keel | 1.97e-09 | 52 |
brain | 4.33e-09 | 47 |
future brain | 4.33e-09 | 47 |
anatomical conduit | 4.52e-09 | 122 |
pre-chordal neural plate | 7.00e-09 | 49 |
neurectoderm | 8.11e-09 | 64 |
neural plate | 8.11e-09 | 64 |
presumptive neural plate | 8.11e-09 | 64 |
regional part of brain | 8.51e-09 | 46 |
structure with developmental contribution from neural crest | 1.39e-08 | 92 |
anterior neural tube | 1.62e-08 | 40 |
tube | 1.87e-08 | 114 |
regional part of forebrain | 3.91e-08 | 39 |
forebrain | 3.91e-08 | 39 |
future forebrain | 3.91e-08 | 39 |
ecto-epithelium | 4.27e-08 | 73 |
ectoderm-derived structure | 5.45e-07 | 95 |
ectoderm | 5.45e-07 | 95 |
presumptive ectoderm | 5.45e-07 | 95 |
gray matter | 7.21e-07 | 34 |