FFCP PHASE1:Mm9::chr8:125777986..125778023,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:125777986..125778023,-
|short_description=p1@1300018I17Rik
|description=CAGE_peak_1_at_1300018I17Rik_5end
|association_with_transcript=0bp_to_ENSMUST000001...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72325 | |EntrezGene=72325 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3U280,D6RGB6 | |UniProt=Q3U280,D6RGB6 | ||
|association_with_transcript=0bp_to_ENSMUST00000118279,ENSMUST00000130275,ENSMUST00000155869_5end | |||
|cluster_id=chr8:125777986..125778023,- | |||
|description=CAGE_peak_1_at_1300018I17Rik_5end | |||
|id=chr8:125777986..125778023,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.71e-13!102;UBERON:0000924!1.71e-13!102;UBERON:0006601!1.71e-13!102;UBERON:0001049!2.27e-13!52;UBERON:0005068!2.27e-13!52;UBERON:0006241!2.27e-13!52;UBERON:0007135!2.27e-13!52;UBERON:0001017!2.93e-13!73;UBERON:0005743!2.93e-13!73;UBERON:0000073!6.35e-12!75;UBERON:0001016!6.35e-12!75;UBERON:0002346!7.25e-12!71;UBERON:0003075!7.25e-12!71;UBERON:0007284!7.25e-12!71;UBERON:0000033!1.35e-11!63;UBERON:0000955!1.54e-11!50;UBERON:0006238!1.54e-11!50;UBERON:0002616!2.02e-11!49;UBERON:0002020!8.26e-09!34;UBERON:0003080!9.80e-09!40;UBERON:0002780!3.34e-08!39;UBERON:0001890!3.34e-08!39;UBERON:0006240!3.34e-08!39;UBERON:0003056!4.89e-08!49;UBERON:0004111!7.90e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.14e-14,54;UBERON:0001049,2.27e-13,52;UBERON:0005068,2.27e-13,52;UBERON:0006241,2.27e-13,52;UBERON:0007135,2.27e-13,52;UBERON:0001017,2.93e-13,73;UBERON:0004121,3.89e-13,95;UBERON:0000924,3.89e-13,95;UBERON:0006601,3.89e-13,95;UBERON:0010314,7.57e-13,92;UBERON:0010371,1.29e-12,73;UBERON:0001016,6.35e-12,75;UBERON:0002346,1.00e-11,64;UBERON:0003075,1.00e-11,64;UBERON:0007284,1.00e-11,64;UBERON:0000955,2.09e-10,47;UBERON:0006238,2.09e-10,47;UBERON:0002616,2.73e-10,46;UBERON:0002020,8.26e-09,34;UBERON:0003080,9.79e-09,40;UBERON:0002780,3.34e-08,39;UBERON:0001890,3.34e-08,39;UBERON:0006240,3.34e-08,39;UBERON:0003056,4.89e-08,49;UBERON:0004111,7.90e-08,122 | |||
|phase1_expression=10.4096750618116,10.8182376368202,16.3799726180233,12.7034968748869,16.0286633582831,5.70789524500425,3.97141489012394,6.06879620175408,1.83025338797167,1.87251621057595,1.88339765048055,1.59544317990673,2.9104124088305,2.79745287740792,3.33109761815663,3.03712901084739,1.39912375625629,4.25873923233621,4.11343300817216,4.2438965179803,10.2902381082794,2.48227378002213,2.08959831311148,6.07971206614945,5.04700418347774,12.6331032105304,6.8921919385452,9.04979177280734,6.84084310042946,5.79669298447841,3.99114919179548,1.90509202037889,4.92051830067656,0,3.17736781726402,1.49611180822643,2.6542016314108,17.996860121687,20.3147189576188,16.2292360631877,23.5292595212406,24.589637458504,26.2175590636823,6.79842817068117,6.48812359804893,7.52541683862894,20.342174953049,3.70642765846759,9.00713349211335,3.88859798148567,3.63964696225943,2.87505128729943,2.68452169692378,0.725362142011344,2.35265659399725,4.63066984864705,5.73066879877513,4.64104883049698,18.0061650165042,15.869729378161,16.4796164911607,7.11573517345177,4.4464739805557,17.5480444869873,15.8218618010716,14.9200824138681,13.1824048628098,16.1371688235053,10.9910989046986,7.02030879324791,9.25429829946081,21.4238238302853,18.1112203580323,9.67677313798137,8.24271050756833,2.75765635983006,13.2139057199266,18.386976684267,15.5142598588806,19.6510568717989,17.199676997253,16.1483144872596,13.959149950069,7.87867654044352,13.5990440521361,19.1508580557884,19.362548588678,19.9447407033072,2.72614295999463,4.23200736597999,7.24661221754194,6.0229671388697,3.39985666853875,7.55584468292944,9.74664626171504,7.16843019355737,11.6568868709354,7.83979483859066,6.75443611967459,8.48014978824817,9.43650912503759,8.98285341900225,0,14.2213340630666,2.16491041011214,0.506719730950197,1.01104889002957,11.418387971906,7.25026074212081,15.5864246018066,9.02123699183906,9.13396434936424,9.4552353874984,9.49552635481522,12.6995803706561,11.8126595849895,6.67426412882809,8.82056077211461,5.30766331169925,11.1619126463712,9.05450225687614,9.69750506270444,5.59175283654366,16.9812862266697,17.8029700791437,10.4737392635522,2.15667224110656,2.39961092397363,3.81210681219194,22.4685959107234,23.33253074375,22.240820323977,20.5112697826886,27.105838477015,22.8566849015516,18.1710214635889,13.4427960282417,11.6942552373487,5.30717792710717,9.89076722666428,8.32770834961304,5.74755261083682,9.90341713929421,9.0422890701429,12.042460349785,9.73664274164858,10.4008914261299,15.78090561508,6.68260778091811,10.2117283290622,9.85326295318113,9.64461222681329,9.73165372289593,12.537077994798,12.1411460480687,10.3497818745616,0.702213187313235,1.28673953557358,1.70498099637356,7.04227626620706,6.80125573945179,8.4629168886677,9.70653415899362,12.3961466000864,11.5700334665534,12.0917651270212,13.413670069981,11.0927075248811,18.1015834904828,11.984224877774,15.3220050041667,14.4737987551079,17.344459107993,19.4599307202539,22.2907345477975,16.9792610425819,18.1730330641089,8.72686869989696,8.10495352033889,13.0052536241846,9.665059599157,7.66397393568702,9.11749979763968,8.3699275489526,11.8632265386128,7.5761519173045,12.0640900224129,10.7436494902221,11.5028811400281,18.8752075817387,12.1037307929829,12.5459002150251,5.12103332573321,7.99739588268102,9.01661885384643,9.36796108088446,9.50367187121366,12.3439043006961,9.99137286563265,11.8088118383682,11.4609071324204,14.5608653427725,12.4510103376603,2.66952169145751,3.73462090715086,4.72210436008193,4.86864291332407,6.02942899381042,5.0925170356284,5.4662266115654,5.5125977103512,6.31491250332587,7.18841032636773,15.2577788544086,9.36113019343682,11.36604950762,10.0462551572271,13.5084185981743,7.944387177164,5.30575952957357,8.8001087278694,11.3729207469376,9.62230017982859,9.71536293162531,9.04565835366852,12.2934198150413,12.7684466726015,9.96591103419487,12.5969267239415,8.68475567993411,9.15230403889247,7.5217510462386,9.04747703635634,11.4220193601929,9.34352118736169,8.00216564283724,19.1055202085472,16.5268478095006,7.70494243270374,11.3611917241968,8.20321370482267,9.76096860741596,7.75524231838076,7.64700153448166,9.58034298554295,10.7569081699756,7.69140333182299,11.3979784585412,8.69633111482352,11.5675673911851,9.36804562374573,15.4917075190512,10.9134262766896,11.0529982391599,9.2921596837974,7.04063844849446,7.86041248108353,7.35559811048003,8.26845300066164,8.60818414242997,10.3371317267288,6.90714086007261,7.48644494607915,11.6933600436252,10.5418608574999,16.5016869197099,15.3197822589205,8.64293251350289,13.9707378485375,10.502514716548,9.57637261668277,10.5237602385222,13.4930196893739,17.9634319977614,6.10146440965647,8.04961869282517,11.467476698858,12.036696464728,13.724476269152,13.8719727334758,15.3990323764046,13.6236946788401,9.91034844541493,16.8737024829564,5.29699730473343,9.49379592630823,7.59297562215818,4.33247451110789,4.64760374251486,5.0331198105435,3.56954702987096,3.91864066506242,5.2515990045681,11.4560474161814,7.11755985557555,8.53941761932765,9.07244862903131,9.19988502463662,9.38959024108564,12.1377911746339,12.067404535899,9.6849698534091,9.46189305030088,18.6401793926078,11.2738587736838,12.4098733216502,7.94200754194069,13.6115831840833,7.74958940866387,11.3200604078821,11.6183666259296,11.9788034056434,9.12276296503684,9.18019659138823,9.50499020650956,2.52808896502543,4.86540516696394,5.13554785824136,4.67714962720062,4.833720783022,3.57626438606277,4.44723163223885,4.43068581523732,4.34155734777035,5.41068327250499,5.34378781225255,5.26272555994663,4.2333210321745,4.9088298916259,19.4988129909082,3.32978930061097,2.69141569828427,1.34307693091263,9.65947970160952,9.00875882165674,5.86085197655248,11.1471557121114,13.5424468089548,26.5433366030021,15.1907328047368,21.7700295106971,23.7157391634289,15.7568979547248,12.8416962556249,15.5255175053315,22.0657389579868,15.406841905463,16.0505696643064,6.53860289780313,5.98537310101547,7.68301225893604,10.4535888339366,8.17491334249131,10.1113929647508,9.11211583986622,9.88968274746692,15.0832028508153,8.08631077644152,13.1809235942925,9.61994341068989,10.7687733590365,12.2928292617349,10.9701745705221,7.1444053692461,11.240779616651,10.4170979050401,6.59337441285291,6.03515572551029,8.9146005620208,9.9386451449229,10.7296285476294,7.84870649814574,7.0582035311498,9.56145069175945,10.0610385080025,6.83981249738391,10.8643291076689,6.17256498823512,10.6771516311757,13.3966096030766,6.54769669071503,10.6906420418317,12.5389297137742,19.2354145012218,12.1644436391612,11.1732948105115,11.2860115920618,11.9119366324538,9.50658126043728 | |phase1_expression=10.4096750618116,10.8182376368202,16.3799726180233,12.7034968748869,16.0286633582831,5.70789524500425,3.97141489012394,6.06879620175408,1.83025338797167,1.87251621057595,1.88339765048055,1.59544317990673,2.9104124088305,2.79745287740792,3.33109761815663,3.03712901084739,1.39912375625629,4.25873923233621,4.11343300817216,4.2438965179803,10.2902381082794,2.48227378002213,2.08959831311148,6.07971206614945,5.04700418347774,12.6331032105304,6.8921919385452,9.04979177280734,6.84084310042946,5.79669298447841,3.99114919179548,1.90509202037889,4.92051830067656,0,3.17736781726402,1.49611180822643,2.6542016314108,17.996860121687,20.3147189576188,16.2292360631877,23.5292595212406,24.589637458504,26.2175590636823,6.79842817068117,6.48812359804893,7.52541683862894,20.342174953049,3.70642765846759,9.00713349211335,3.88859798148567,3.63964696225943,2.87505128729943,2.68452169692378,0.725362142011344,2.35265659399725,4.63066984864705,5.73066879877513,4.64104883049698,18.0061650165042,15.869729378161,16.4796164911607,7.11573517345177,4.4464739805557,17.5480444869873,15.8218618010716,14.9200824138681,13.1824048628098,16.1371688235053,10.9910989046986,7.02030879324791,9.25429829946081,21.4238238302853,18.1112203580323,9.67677313798137,8.24271050756833,2.75765635983006,13.2139057199266,18.386976684267,15.5142598588806,19.6510568717989,17.199676997253,16.1483144872596,13.959149950069,7.87867654044352,13.5990440521361,19.1508580557884,19.362548588678,19.9447407033072,2.72614295999463,4.23200736597999,7.24661221754194,6.0229671388697,3.39985666853875,7.55584468292944,9.74664626171504,7.16843019355737,11.6568868709354,7.83979483859066,6.75443611967459,8.48014978824817,9.43650912503759,8.98285341900225,0,14.2213340630666,2.16491041011214,0.506719730950197,1.01104889002957,11.418387971906,7.25026074212081,15.5864246018066,9.02123699183906,9.13396434936424,9.4552353874984,9.49552635481522,12.6995803706561,11.8126595849895,6.67426412882809,8.82056077211461,5.30766331169925,11.1619126463712,9.05450225687614,9.69750506270444,5.59175283654366,16.9812862266697,17.8029700791437,10.4737392635522,2.15667224110656,2.39961092397363,3.81210681219194,22.4685959107234,23.33253074375,22.240820323977,20.5112697826886,27.105838477015,22.8566849015516,18.1710214635889,13.4427960282417,11.6942552373487,5.30717792710717,9.89076722666428,8.32770834961304,5.74755261083682,9.90341713929421,9.0422890701429,12.042460349785,9.73664274164858,10.4008914261299,15.78090561508,6.68260778091811,10.2117283290622,9.85326295318113,9.64461222681329,9.73165372289593,12.537077994798,12.1411460480687,10.3497818745616,0.702213187313235,1.28673953557358,1.70498099637356,7.04227626620706,6.80125573945179,8.4629168886677,9.70653415899362,12.3961466000864,11.5700334665534,12.0917651270212,13.413670069981,11.0927075248811,18.1015834904828,11.984224877774,15.3220050041667,14.4737987551079,17.344459107993,19.4599307202539,22.2907345477975,16.9792610425819,18.1730330641089,8.72686869989696,8.10495352033889,13.0052536241846,9.665059599157,7.66397393568702,9.11749979763968,8.3699275489526,11.8632265386128,7.5761519173045,12.0640900224129,10.7436494902221,11.5028811400281,18.8752075817387,12.1037307929829,12.5459002150251,5.12103332573321,7.99739588268102,9.01661885384643,9.36796108088446,9.50367187121366,12.3439043006961,9.99137286563265,11.8088118383682,11.4609071324204,14.5608653427725,12.4510103376603,2.66952169145751,3.73462090715086,4.72210436008193,4.86864291332407,6.02942899381042,5.0925170356284,5.4662266115654,5.5125977103512,6.31491250332587,7.18841032636773,15.2577788544086,9.36113019343682,11.36604950762,10.0462551572271,13.5084185981743,7.944387177164,5.30575952957357,8.8001087278694,11.3729207469376,9.62230017982859,9.71536293162531,9.04565835366852,12.2934198150413,12.7684466726015,9.96591103419487,12.5969267239415,8.68475567993411,9.15230403889247,7.5217510462386,9.04747703635634,11.4220193601929,9.34352118736169,8.00216564283724,19.1055202085472,16.5268478095006,7.70494243270374,11.3611917241968,8.20321370482267,9.76096860741596,7.75524231838076,7.64700153448166,9.58034298554295,10.7569081699756,7.69140333182299,11.3979784585412,8.69633111482352,11.5675673911851,9.36804562374573,15.4917075190512,10.9134262766896,11.0529982391599,9.2921596837974,7.04063844849446,7.86041248108353,7.35559811048003,8.26845300066164,8.60818414242997,10.3371317267288,6.90714086007261,7.48644494607915,11.6933600436252,10.5418608574999,16.5016869197099,15.3197822589205,8.64293251350289,13.9707378485375,10.502514716548,9.57637261668277,10.5237602385222,13.4930196893739,17.9634319977614,6.10146440965647,8.04961869282517,11.467476698858,12.036696464728,13.724476269152,13.8719727334758,15.3990323764046,13.6236946788401,9.91034844541493,16.8737024829564,5.29699730473343,9.49379592630823,7.59297562215818,4.33247451110789,4.64760374251486,5.0331198105435,3.56954702987096,3.91864066506242,5.2515990045681,11.4560474161814,7.11755985557555,8.53941761932765,9.07244862903131,9.19988502463662,9.38959024108564,12.1377911746339,12.067404535899,9.6849698534091,9.46189305030088,18.6401793926078,11.2738587736838,12.4098733216502,7.94200754194069,13.6115831840833,7.74958940866387,11.3200604078821,11.6183666259296,11.9788034056434,9.12276296503684,9.18019659138823,9.50499020650956,2.52808896502543,4.86540516696394,5.13554785824136,4.67714962720062,4.833720783022,3.57626438606277,4.44723163223885,4.43068581523732,4.34155734777035,5.41068327250499,5.34378781225255,5.26272555994663,4.2333210321745,4.9088298916259,19.4988129909082,3.32978930061097,2.69141569828427,1.34307693091263,9.65947970160952,9.00875882165674,5.86085197655248,11.1471557121114,13.5424468089548,26.5433366030021,15.1907328047368,21.7700295106971,23.7157391634289,15.7568979547248,12.8416962556249,15.5255175053315,22.0657389579868,15.406841905463,16.0505696643064,6.53860289780313,5.98537310101547,7.68301225893604,10.4535888339366,8.17491334249131,10.1113929647508,9.11211583986622,9.88968274746692,15.0832028508153,8.08631077644152,13.1809235942925,9.61994341068989,10.7687733590365,12.2928292617349,10.9701745705221,7.1444053692461,11.240779616651,10.4170979050401,6.59337441285291,6.03515572551029,8.9146005620208,9.9386451449229,10.7296285476294,7.84870649814574,7.0582035311498,9.56145069175945,10.0610385080025,6.83981249738391,10.8643291076689,6.17256498823512,10.6771516311757,13.3966096030766,6.54769669071503,10.6906420418317,12.5389297137742,19.2354145012218,12.1644436391612,11.1732948105115,11.2860115920618,11.9119366324538,9.50658126043728 | ||
|short_description=p1@1300018I17Rik | |||
}} | }} |
Latest revision as of 16:46, 1 October 2015
Short description: | p1@1300018I17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1300018I17Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000118279, ENSMUST00000130275, ENSMUST00000155869_5end |
EntrezGene: | 1300018I17Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.14e-14 | 54 |
neural tube | 2.27e-13 | 52 |
neural rod | 2.27e-13 | 52 |
future spinal cord | 2.27e-13 | 52 |
neural keel | 2.27e-13 | 52 |
central nervous system | 2.93e-13 | 73 |
ectoderm-derived structure | 3.89e-13 | 95 |
ectoderm | 3.89e-13 | 95 |
presumptive ectoderm | 3.89e-13 | 95 |
structure with developmental contribution from neural crest | 7.57e-13 | 92 |
ecto-epithelium | 1.29e-12 | 73 |
nervous system | 6.35e-12 | 75 |
neurectoderm | 1.00e-11 | 64 |
neural plate | 1.00e-11 | 64 |
presumptive neural plate | 1.00e-11 | 64 |
brain | 2.09e-10 | 47 |
future brain | 2.09e-10 | 47 |
regional part of brain | 2.73e-10 | 46 |
gray matter | 8.26e-09 | 34 |
anterior neural tube | 9.79e-09 | 40 |
regional part of forebrain | 3.34e-08 | 39 |
forebrain | 3.34e-08 | 39 |
future forebrain | 3.34e-08 | 39 |
pre-chordal neural plate | 4.89e-08 | 49 |
anatomical conduit | 7.90e-08 | 122 |