FFCP PHASE1:Mm9::chr18:72510663..72510676,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13176 | |EntrezGene=13176 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=E9QAE7 | |UniProt=E9QAE7 | ||
|association_with_transcript=0bp_to_ENSMUST00000073379_5end | |association_with_transcript=0bp_to_ENSMUST00000073379_5end | ||
|cluster_id=chr18:72510663..72510676,- | |||
|description=CAGE_peak_3_at_Dcc_5end | |description=CAGE_peak_3_at_Dcc_5end | ||
|id=chr18:72510663..72510676,- | |id=chr18:72510663..72510676,- | ||
|ontology_enrichment_celltype=CL:0000117!1.85e-16!23;CL:0000337!1.85e-16!23;CL:0000540!4.89e-13!33;CL:0000047!4.89e-13!33;CL:0000031!4.89e-13!33;CL:0000404!4.89e-13!33;CL:0000393!1.54e-09!39;CL:0000211!1.54e-09!39;CL:0000221!1.70e-09!44;CL:0000133!1.70e-09!44;CL:0002319!2.99e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.16e-20,23;CL:0000337,4.16e-20,23;CL:0000540,3.01e-12,33;CL:0000047,3.01e-12,33;CL:0000031,3.01e-12,33;CL:0000404,3.01e-12,33;CL:0000393,1.62e-09,39;CL:0000211,1.62e-09,39;CL:0002609,9.27e-09,6;CL:0002319,3.85e-08,43;CL:0000221,7.71e-08,44;CL:0000133,7.71e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.02e-25!71;UBERON:0003075!7.02e-25!71;UBERON:0007284!7.02e-25!71;UBERON:0003056!2.10e-24!49;UBERON:0000033!3.63e-24!63;UBERON:0001017!1.32e-22!73;UBERON:0005743!1.32e-22!73;UBERON:0000073!1.89e-21!75;UBERON:0001016!1.89e-21!75;UBERON:0001049!7.45e-21!52;UBERON:0005068!7.45e-21!52;UBERON:0006241!7.45e-21!52;UBERON:0007135!7.45e-21!52;UBERON:0004121!1.09e-20!102;UBERON:0000924!1.09e-20!102;UBERON:0006601!1.09e-20!102;UBERON:0000955!3.77e-18!50;UBERON:0006238!3.77e-18!50;UBERON:0002616!2.06e-17!49;UBERON:0003080!2.35e-17!40;UBERON:0002780!1.01e-16!39;UBERON:0001890!1.01e-16!39;UBERON:0006240!1.01e-16!39;UBERON:0002020!3.75e-16!34;UBERON:0007811!7.14e-14!86;UBERON:0000153!4.27e-13!94;UBERON:0002791!1.01e-12!29;UBERON:0003528!1.01e-12!29;UBERON:0001893!1.01e-12!29;UBERON:0000970!3.51e-08!9;UBERON:0000019!3.51e-08!9;UBERON:0000047!3.51e-08!9;UBERON:0004088!3.51e-08!9;UBERON:0002104!3.51e-08!9;UBERON:0001456!3.51e-08!9;UBERON:0003072!3.51e-08!9;UBERON:0003071!3.51e-08!9;UBERON:0004128!3.51e-08!9;UBERON:0000956!1.35e-07!21;UBERON:0001869!1.35e-07!21;UBERON:0000203!1.35e-07!21;UBERON:0000020!2.83e-07!12;UBERON:0001032!2.83e-07!12;UBERON:0004456!2.83e-07!12;UBERON:0002420!7.03e-07!8;UBERON:0007245!7.03e-07!8;UBERON:0010009!7.03e-07!8;UBERON:0010011!7.03e-07!8;UBERON:0000454!7.03e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.94e-28,64;UBERON:0003075,3.94e-28,64;UBERON:0007284,3.94e-28,64;UBERON:0003056,2.13e-27,49;UBERON:0010371,3.46e-23,73;UBERON:0000073,5.98e-23,54;UBERON:0004121,1.26e-22,95;UBERON:0000924,1.26e-22,95;UBERON:0006601,1.26e-22,95;UBERON:0001049,3.35e-21,52;UBERON:0005068,3.35e-21,52;UBERON:0006241,3.35e-21,52;UBERON:0007135,3.35e-21,52;UBERON:0001017,5.54e-20,73;UBERON:0001016,3.76e-19,75;UBERON:0000955,4.57e-19,47;UBERON:0006238,4.57e-19,47;UBERON:0002020,1.32e-18,34;UBERON:0003080,1.54e-18,40;UBERON:0002616,4.94e-18,46;UBERON:0002780,1.24e-17,39;UBERON:0001890,1.24e-17,39;UBERON:0006240,1.24e-17,39;UBERON:0010314,5.56e-16,92;UBERON:0003528,7.56e-15,29;UBERON:0002791,7.56e-15,29;UBERON:0001893,7.56e-15,29;UBERON:0000970,2.88e-10,9;UBERON:0000019,2.88e-10,9;UBERON:0000047,2.88e-10,9;UBERON:0010312,2.88e-10,9;UBERON:0004088,2.88e-10,9;UBERON:0002104,2.88e-10,9;UBERON:0001456,2.88e-10,9;UBERON:0003072,2.88e-10,9;UBERON:0004128,2.88e-10,9;UBERON:0003071,2.88e-10,9;UBERON:0000956,1.00e-09,21;UBERON:0001869,1.00e-09,21;UBERON:0000203,1.00e-09,21;UBERON:0001444,4.63e-08,11;UBERON:0000369,5.94e-08,5;UBERON:0002435,5.94e-08,5;UBERON:0000204,5.94e-08,5;UBERON:0010082,5.94e-08,5;UBERON:0000020,3.08e-07,12;UBERON:0001032,3.08e-07,12;UBERON:0004456,3.08e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,11.1088105647127,10.1413024560989,0,0,0,0,0,0.299600110518405,0.768436610643109,4.35496371695606,3.24014251996058,2.73422449756797,0.571301968807607,1.76694832761291,2.32732518508413,1.34183659425531,3.67687514644008,0,1.53224805702225,1.0752457327937,6.19865552331911,5.30628332893976,5.2091337055676,0.837548997004143,0.56276261003168,2.13917546887534,4.12480019663135,2.70506193518296,4.28718725398191,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.49790639404823,2.74500361691176,1.38219787324151,1.21677024134594,1.79000820131231,2.0778804455956,1.62241263067758,0,0,0,0.420883711772948,4.29397461776922,6.20735681970377,5.94205028357652,2.71268672104287,3.40182495756639,6.02134485338794,4.59138450342671,1.03481348295606,0,1.32374256117473,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0.116765342367169,0,0,0,0,0,0,2.3131894342054,9.15851050175631,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.87538698547525,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0.404810701674894,0,0,2.24924921495265,0,0.178065603667255,0.488660878060728,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,1.62054984628179,0.129358683782755,1.28602221018955,1.59606210278046,1.07021290561242,0.987294123612726,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.71868654031819,1.03111909406213,0,1.5107877947794,1.35004500046361,0,0.906284817968409,1.03552062350364,2.38710899443606,12.369771075432,4.95127456686989,1.45864030240976,0.419226325255965,0.367687016900028,1.33348036680969,1.23621034343337,0,2.02157769411038,1.52087579934144,0.565879024158229,1.03005658216871,1.21647789569252,0.918967503289812,1.42888107384922,0.811190281613988,1.15745532278223,0.412085900803307,0.147198920134397,1.02860775715625,0.532427418478012,0.715308569841963,1.59881058295561,1.97629698872194,0.761531471025089,0.73171189149109,0.789209134313529,0.950628796921032,1.12228454331548,0.711810108745045,0.689531376628944,1.22769312950907,1.39443157067369,0.578719832943424,1.49886346762768,0.467863216890817,0.644613162144895,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,11.1088105647127,10.1413024560989,0,0,0,0,0,0.299600110518405,0.768436610643109,4.35496371695606,3.24014251996058,2.73422449756797,0.571301968807607,1.76694832761291,2.32732518508413,1.34183659425531,3.67687514644008,0,1.53224805702225,1.0752457327937,6.19865552331911,5.30628332893976,5.2091337055676,0.837548997004143,0.56276261003168,2.13917546887534,4.12480019663135,2.70506193518296,4.28718725398191,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.49790639404823,2.74500361691176,1.38219787324151,1.21677024134594,1.79000820131231,2.0778804455956,1.62241263067758,0,0,0,0.420883711772948,4.29397461776922,6.20735681970377,5.94205028357652,2.71268672104287,3.40182495756639,6.02134485338794,4.59138450342671,1.03481348295606,0,1.32374256117473,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0.116765342367169,0,0,0,0,0,0,2.3131894342054,9.15851050175631,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.87538698547525,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0.404810701674894,0,0,2.24924921495265,0,0.178065603667255,0.488660878060728,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,1.62054984628179,0.129358683782755,1.28602221018955,1.59606210278046,1.07021290561242,0.987294123612726,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.71868654031819,1.03111909406213,0,1.5107877947794,1.35004500046361,0,0.906284817968409,1.03552062350364,2.38710899443606,12.369771075432,4.95127456686989,1.45864030240976,0.419226325255965,0.367687016900028,1.33348036680969,1.23621034343337,0,2.02157769411038,1.52087579934144,0.565879024158229,1.03005658216871,1.21647789569252,0.918967503289812,1.42888107384922,0.811190281613988,1.15745532278223,0.412085900803307,0.147198920134397,1.02860775715625,0.532427418478012,0.715308569841963,1.59881058295561,1.97629698872194,0.761531471025089,0.73171189149109,0.789209134313529,0.950628796921032,1.12228454331548,0.711810108745045,0.689531376628944,1.22769312950907,1.39443157067369,0.578719832943424,1.49886346762768,0.467863216890817,0.644613162144895,0.191288332068843,0,0.231867835620421 | ||
|short_description=p3@Dcc | |short_description=p3@Dcc | ||
}} | }} |
Latest revision as of 17:06, 1 October 2015
Short description: | p3@Dcc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dcc_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000073379_5end |
EntrezGene: | Dcc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.16e-20 | 23 |
neuroblast (sensu Vertebrata) | 4.16e-20 | 23 |
neuron | 3.01e-12 | 33 |
neuronal stem cell | 3.01e-12 | 33 |
neuroblast | 3.01e-12 | 33 |
electrically signaling cell | 3.01e-12 | 33 |
electrically responsive cell | 1.62e-09 | 39 |
electrically active cell | 1.62e-09 | 39 |
neuron of cerebral cortex | 9.27e-09 | 6 |
neural cell | 3.85e-08 | 43 |
ectodermal cell | 7.71e-08 | 44 |
neurectodermal cell | 7.71e-08 | 44 |