FFCP PHASE1:Mm9::chr5:116102962..116102975,-: Difference between revisions
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{{FFCP|EntrezGene=75665|HGNC=|UniProt=|association_with_transcript=11bp_to_uc008zek.1_5end|description=CAGE_peak_2_at_Ccdc64_5end|id=chr5:116102962..116102975,-|ontology_enrichment_celltype=CL:0000055!9.88e-10!50;CL:0002319!1.53e-08!43;CL:0000221!5.16e-08!44;CL:0000133!5.16e-08!44;CL:0000393!1.32e-07!39;CL:0000211!1.32e-07!39|ontology_enrichment_celltype_v019_2=CL:0002319,1.77e-12,43;CL:0000221,4.92e-12,44;CL:0000133,4.92e-12,44;CL:0000117,1.69e-10,23;CL:0000337,1.69e-10,23;CL:0002453,3.98e-10,8;CL:0002321,4.87e-10,70;CL:0000393,1.88e-09,39;CL:0000211,1.88e-09,39;CL:0000128,5.01e-08,6;CL:0000126,5.01e-08,6;CL:0000127,5.01e-08,6;CL:0000723,8.83e-08,91;CL:0000048,8.83e-08,91;CL:0000333,9.65e-08,10;CL:0000095,9.65e-08,10;CL:0000243,9.65e-08,10;CL:0000123,9.65e-08,10;CL:0000125,9.65e-08,10;CL:0000030,9.65e-08,10;CL:0000339,9.65e-08,10;CL:0000540,5.63e-07,33;CL:0000047,5.63e-07,33;CL:0000031,5.63e-07,33;CL:0000404,5.63e-07,33;CL:0000034,8.99e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.97e-17!73;UBERON:0005743!4.97e-17!73;UBERON:0000073!3.76e-16!75;UBERON:0001016!3.76e-16!75;UBERON:0001049!2.85e-12!52;UBERON:0005068!2.85e-12!52;UBERON:0006241!2.85e-12!52;UBERON:0007135!2.85e-12!52;UBERON:0004121!8.07e-11!102;UBERON:0000924!8.07e-11!102;UBERON:0006601!8.07e-11!102;UBERON:0000955!1.41e-10!50;UBERON:0006238!1.41e-10!50;UBERON:0002616!1.79e-10!49;UBERON:0002346!1.07e-09!71;UBERON:0003075!1.07e-09!71;UBERON:0007284!1.07e-09!71;UBERON:0000033!3.33e-08!63;UBERON:0003076!1.52e-07!12;UBERON:0003057!1.52e-07!12;UBERON:0002020!2.59e-07!34;UBERON:0003080!7.93e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.56e-20,73;UBERON:0001016,2.57e-19,75;UBERON:0000073,3.05e-18,54;UBERON:0001049,1.82e-16,52;UBERON:0005068,1.82e-16,52;UBERON:0006241,1.82e-16,52;UBERON:0007135,1.82e-16,52;UBERON:0004121,8.57e-13,95;UBERON:0000924,8.57e-13,95;UBERON:0006601,8.57e-13,95;UBERON:0002346,1.05e-11,64;UBERON:0003075,1.05e-11,64;UBERON:0007284,1.05e-11,64;UBERON:0003076,2.42e-11,12;UBERON:0003057,2.42e-11,12;UBERON:0002020,6.34e-11,34;UBERON:0002616,1.06e-10,46;UBERON:0000955,2.49e-10,47;UBERON:0006238,2.49e-10,47;UBERON:0010371,5.20e-10,73;UBERON:0002240,2.34e-09,6;UBERON:0005174,2.34e-09,6;UBERON:0001137,2.34e-09,6;UBERON:0000025,3.28e-09,114;UBERON:0004111,1.63e-08,122;UBERON:0003080,3.58e-08,40;UBERON:0001948,6.43e-08,5;UBERON:0002315,6.43e-08,5;UBERON:0010314,1.22e-07,92;UBERON:0002780,2.49e-07,39;UBERON:0001890,2.49e-07,39;UBERON:0006240,2.49e-07,39;UBERON:0002950,6.50e-07,4;UBERON:0001891,6.50e-07,4;UBERON:0009616,6.50e-07,4;UBERON:0010286,6.50e-07,4;UBERON:0000055,6.69e-07,5;UBERON:0007500,6.69e-07,5;UBERON:0001981,6.69e-07,5;UBERON:0002049,6.69e-07,5;UBERON:0007798,6.69e-07,5;UBERON:0004537,6.69e-07,5;UBERON:0006965,6.69e-07,5|phase1_expression=1.28119077683835,0,0,0.30246421130683,0,0.503637815735669,0.467225281191051,1.29123323441576,0.281577444303333,0.936258105287974,0,0,0.684802919724823,0.699363219351979,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.935476191661768,0.297872853602656,0.261199789138935,0,0,0,0,0.215471232685889,0.380046838912748,0,0.443461021310609,0,0.61506478758457,0,0.577703239502549,0.332469290716985,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.971020706062307,2.26614272356039,3.24406179902447,1.83546752161682,6.25913075478431,1.30815093828268,1.75748946187577,2.52758868796568,1.25987779462826,2.87505128729943,0.671130424230945,2.17608642603403,0,0.514518872071894,0.573066879877513,2.57836046138721,1.82084814773638,0.528990979272033,1.26766280701236,1.35537812827653,1.77858959222228,1.7997994345628,0.988866362566974,1.4209602298922,1.19840044207362,7.68436610643109,0.622137673850866,0.135005938331691,0.210324961351382,3.42781181284564,3.97563373712904,0.367472397644862,0.479227355091182,0,2.20231761998777,2.17068474744819,2.30409799884365,0.395658863190582,1.00636407962651,1.56274011167028,3.35019598801657,2.8138130501584,2.44477196442896,2.65165726926301,2.42031857358475,1.86399445825301,0.151452386666368,0.377857800533928,2.6087803983151,0,0,0,0,0,0.421333260395256,2.55645483867087,1.29893002301434,2.12003744706204,0.14084341977668,1.28326477414318,0,0,0,0,0.505524445014783,0.45673551887624,0.258937883647172,0.890652834388949,0.520455980298408,0.608930956624282,1.61430848079241,0.150722640552623,0.23517741427141,0.753999547978053,0.494389935468748,1.01219549843938,0,0.161766849947409,0.441683036920787,0,0,0.878342391034642,0.628340120440365,0.255457055208591,0.359445373517761,0.599902730993408,0.127070227073065,4.04434726393021,0.457500602818626,1.25654352112864,1.73824320192276,2.30143911597297,2.28566849015516,3.24482526135515,0.407357455401265,0.622034853050465,0.758168275301024,0,0.650602214813519,0.229902104433473,0,0.150704817835715,0.748401490664606,0.384341160854549,0.468508622798644,0.517406741478031,0.646703978798527,0.567318240503458,0.879755620819744,1.31517439456545,0.2780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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75665 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=11bp_to_uc008zek.1_5end | |||
|cluster_id=chr5:116102962..116102975,- | |||
|description=CAGE_peak_2_at_Ccdc64_5end | |||
|id=chr5:116102962..116102975,- | |||
|ontology_enrichment_celltype=CL:0000055!9.88e-10!50;CL:0002319!1.53e-08!43;CL:0000221!5.16e-08!44;CL:0000133!5.16e-08!44;CL:0000393!1.32e-07!39;CL:0000211!1.32e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.77e-12,43;CL:0000221,4.92e-12,44;CL:0000133,4.92e-12,44;CL:0000117,1.69e-10,23;CL:0000337,1.69e-10,23;CL:0002453,3.98e-10,8;CL:0002321,4.87e-10,70;CL:0000393,1.88e-09,39;CL:0000211,1.88e-09,39;CL:0000128,5.01e-08,6;CL:0000126,5.01e-08,6;CL:0000127,5.01e-08,6;CL:0000723,8.83e-08,91;CL:0000048,8.83e-08,91;CL:0000333,9.65e-08,10;CL:0000095,9.65e-08,10;CL:0000243,9.65e-08,10;CL:0000123,9.65e-08,10;CL:0000125,9.65e-08,10;CL:0000030,9.65e-08,10;CL:0000339,9.65e-08,10;CL:0000540,5.63e-07,33;CL:0000047,5.63e-07,33;CL:0000031,5.63e-07,33;CL:0000404,5.63e-07,33;CL:0000034,8.99e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.97e-17!73;UBERON:0005743!4.97e-17!73;UBERON:0000073!3.76e-16!75;UBERON:0001016!3.76e-16!75;UBERON:0001049!2.85e-12!52;UBERON:0005068!2.85e-12!52;UBERON:0006241!2.85e-12!52;UBERON:0007135!2.85e-12!52;UBERON:0004121!8.07e-11!102;UBERON:0000924!8.07e-11!102;UBERON:0006601!8.07e-11!102;UBERON:0000955!1.41e-10!50;UBERON:0006238!1.41e-10!50;UBERON:0002616!1.79e-10!49;UBERON:0002346!1.07e-09!71;UBERON:0003075!1.07e-09!71;UBERON:0007284!1.07e-09!71;UBERON:0000033!3.33e-08!63;UBERON:0003076!1.52e-07!12;UBERON:0003057!1.52e-07!12;UBERON:0002020!2.59e-07!34;UBERON:0003080!7.93e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.56e-20,73;UBERON:0001016,2.57e-19,75;UBERON:0000073,3.05e-18,54;UBERON:0001049,1.82e-16,52;UBERON:0005068,1.82e-16,52;UBERON:0006241,1.82e-16,52;UBERON:0007135,1.82e-16,52;UBERON:0004121,8.57e-13,95;UBERON:0000924,8.57e-13,95;UBERON:0006601,8.57e-13,95;UBERON:0002346,1.05e-11,64;UBERON:0003075,1.05e-11,64;UBERON:0007284,1.05e-11,64;UBERON:0003076,2.42e-11,12;UBERON:0003057,2.42e-11,12;UBERON:0002020,6.34e-11,34;UBERON:0002616,1.06e-10,46;UBERON:0000955,2.49e-10,47;UBERON:0006238,2.49e-10,47;UBERON:0010371,5.20e-10,73;UBERON:0002240,2.34e-09,6;UBERON:0005174,2.34e-09,6;UBERON:0001137,2.34e-09,6;UBERON:0000025,3.28e-09,114;UBERON:0004111,1.63e-08,122;UBERON:0003080,3.58e-08,40;UBERON:0001948,6.43e-08,5;UBERON:0002315,6.43e-08,5;UBERON:0010314,1.22e-07,92;UBERON:0002780,2.49e-07,39;UBERON:0001890,2.49e-07,39;UBERON:0006240,2.49e-07,39;UBERON:0002950,6.50e-07,4;UBERON:0001891,6.50e-07,4;UBERON:0009616,6.50e-07,4;UBERON:0010286,6.50e-07,4;UBERON:0000055,6.69e-07,5;UBERON:0007500,6.69e-07,5;UBERON:0001981,6.69e-07,5;UBERON:0002049,6.69e-07,5;UBERON:0007798,6.69e-07,5;UBERON:0004537,6.69e-07,5;UBERON:0006965,6.69e-07,5 | |||
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| |||
|short_description=p2@Ccdc64 | |||
}} |
Latest revision as of 17:48, 1 October 2015
Short description: | p2@Ccdc64 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ccdc64_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_uc008zek.1_5end |
EntrezGene: | Ccdc64 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.77e-12 | 43 |
ectodermal cell | 4.92e-12 | 44 |
neurectodermal cell | 4.92e-12 | 44 |
CNS neuron (sensu Vertebrata) | 1.69e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.69e-10 | 23 |
oligodendrocyte precursor cell | 3.98e-10 | 8 |
embryonic cell | 4.87e-10 | 70 |
electrically responsive cell | 1.88e-09 | 39 |
electrically active cell | 1.88e-09 | 39 |
oligodendrocyte | 5.01e-08 | 6 |
macroglial cell | 5.01e-08 | 6 |
astrocyte | 5.01e-08 | 6 |
somatic stem cell | 8.83e-08 | 91 |
multi fate stem cell | 8.83e-08 | 91 |
migratory neural crest cell | 9.65e-08 | 10 |
neuron associated cell | 9.65e-08 | 10 |
glial cell (sensu Vertebrata) | 9.65e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 9.65e-08 | 10 |
glial cell | 9.65e-08 | 10 |
glioblast | 9.65e-08 | 10 |
glioblast (sensu Vertebrata) | 9.65e-08 | 10 |
neuron | 5.63e-07 | 33 |
neuronal stem cell | 5.63e-07 | 33 |
neuroblast | 5.63e-07 | 33 |
electrically signaling cell | 5.63e-07 | 33 |
stem cell | 8.99e-07 | 97 |