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FFCP PHASE1:Mm9::chr3:143867822..143867842,-: Difference between revisions

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{{FFCP|EntrezGene=16911|HGNC=|UniProt=|association_with_transcript=301bp_to_ENSMUST00000134961_5end|description=CAGE_peak_6_at_Lmo4_5end|id=chr3:143867822..143867842,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.11e-11!94;UBERON:0004121!1.31e-11!102;UBERON:0000924!1.31e-11!102;UBERON:0006601!1.31e-11!102;UBERON:0003056!3.25e-11!49;UBERON:0001017!5.59e-11!73;UBERON:0005743!5.59e-11!73;UBERON:0007811!7.32e-11!86;UBERON:0000073!1.62e-10!75;UBERON:0001016!1.62e-10!75;UBERON:0002346!1.80e-10!71;UBERON:0003075!1.80e-10!71;UBERON:0007284!1.80e-10!71;UBERON:0000033!1.95e-10!63;UBERON:0002780!4.00e-10!39;UBERON:0001890!4.00e-10!39;UBERON:0006240!4.00e-10!39;UBERON:0003080!1.58e-09!40;UBERON:0001049!1.59e-09!52;UBERON:0005068!1.59e-09!52;UBERON:0006241!1.59e-09!52;UBERON:0007135!1.59e-09!52;UBERON:0002616!1.73e-08!49;UBERON:0000955!3.05e-08!50;UBERON:0006238!3.05e-08!50;UBERON:0002020!1.21e-07!34;UBERON:0002791!2.56e-07!29;UBERON:0003528!2.56e-07!29;UBERON:0001893!2.56e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0003056,6.65e-12,49;UBERON:0010314,6.99e-11,92;UBERON:0002780,9.00e-11,39;UBERON:0001890,9.00e-11,39;UBERON:0006240,9.00e-11,39;UBERON:0004121,1.28e-10,95;UBERON:0000924,1.28e-10,95;UBERON:0006601,1.28e-10,95;UBERON:0001017,1.66e-10,73;UBERON:0002346,1.74e-10,64;UBERON:0003075,1.74e-10,64;UBERON:0007284,1.74e-10,64;UBERON:0010371,2.59e-10,73;UBERON:0003080,4.34e-10,40;UBERON:0001016,6.63e-10,75;UBERON:0002616,1.23e-09,46;UBERON:0001049,1.82e-09,52;UBERON:0005068,1.82e-09,52;UBERON:0006241,1.82e-09,52;UBERON:0007135,1.82e-09,52;UBERON:0000073,2.56e-09,54;UBERON:0000955,4.56e-09,47;UBERON:0006238,4.56e-09,47;UBERON:0002020,5.08e-08,34;UBERON:0003528,9.40e-08,29;UBERON:0002791,9.40e-08,29;UBERON:0001893,9.40e-08,29;UBERON:0000483,5.48e-07,174;UBERON:0000956,7.84e-07,21;UBERON:0001869,7.84e-07,21;UBERON:0000203,7.84e-07,21|phase1_expression=4.32401887182944,0,0,0,0,0,0,0.903863264091034,0.281577444303333,0.936258105287974,0,0,1.36960583944965,1.83582845079895,1.33243904726265,0,0,0.315462165358238,0.548457734422955,0,0.850432901510698,2.38298282882125,0.261199789138935,0.159992422793407,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.664938581433969,0.816677425049476,6.69650609179052,6.2506827561904,4.18818995179039,9.41170380849623,6.14740936462601,3.39857247121808,2.01434908760924,1.62203089951223,1.46837401729345,7.04152209913235,2.8343270329458,1.97717564461025,4.08302788055995,3.07970127575798,2.87505128729943,0.671130424230945,0.725362142011344,0.672187598284928,2.57259436035947,1.43266719969378,2.06268836910977,4.04632921719196,2.11596391708813,1.90149421051854,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,1.4209602298922,1.49800055259202,4.2264013585371,2.28117147078651,2.8351247049655,3.99617426567626,1.99955689082663,0.662605622854841,3.79721477566358,3.54628242767475,5.51531271966013,0,1.0214987046815,1.68967186581868,2.2420668914133,3.20206752608434,2.08365348222704,1.3959149950069,1.12552522006336,0.61119299110724,2.35702868378934,2.27794689278565,2.42319279572891,1.06016670666458,0.831287161174641,1.15945795480671,0,2.719885334831,0.539703191637817,0.649776417447669,0,0.421333260395256,1.02258193546835,1.29893002301434,0.35333957451034,4.50698943285378,1.28326477414318,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0.91347103775248,0.776813650941515,0.890652834388949,1.56136794089522,1.82679286987285,1.15307748628029,0.904335843315735,2.82212897125692,1.13099932196708,0.741584903203122,2.31358971071859,0,0.970601099684455,0.883366073841574,0,0,0.878342391034642,1.04723353406728,1.27728527604296,2.15667224110656,1.19980546198682,2.28726408731516,0.599162557619291,4.57500602818627,7.91622418311046,2.9550134432687,3.83573185995496,2.0778804455956,1.94689515681309,2.95334155165917,0.746441823660558,0.758168275301024,3.36706969418358,2.99277018814219,2.29902104433473,2.16074555766419,1.9591626318643,3.40182495756639,1.66547836370305,1.03071897015702,1.81092359517311,1.5089759505299,2.64748512234947,3.16712023495108,4.16471891612392,3.89266148915837,1.0447564995665,0.61734640922383,0.59710280045548,3.51106593656617,2.31613116403244,1.98914449576915,2.89976081549703,3.28336483973535,1.98068267607116,2.13070262026689,1.18058539048442,1.3884040159864,1.16266972375204,2.41446061259657,2.91913355917924,1.15191894939436,0.985004784474571,1.4592385718254,0.438599962275997,0,1.07365135008297,2.94405927989778,5.45394445610208,0,0,2.98603550749328,3.25131340604614,0.902072229254653,0.201683524623343,0.667134131534611,0.380451252225118,0.474529061544512,0.494096864172033,0.502670417600539,2.58643413653496,1.16978452271472,0.898819408654221,0,0.398282546508734,4.36236172192088,1.5994791765362,0,1.4255592949172,2.52138233317913,2.66516115583211,0.885311519739602,1.03327103585722,0.156998727841375,0.863780147452604,0,0.500535317148282,1.17935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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16911
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=301bp_to_ENSMUST00000134961_5end
|cluster_id=chr3:143867822..143867842,-
|description=CAGE_peak_6_at_Lmo4_5end
|id=chr3:143867822..143867842,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.11e-11!94;UBERON:0004121!1.31e-11!102;UBERON:0000924!1.31e-11!102;UBERON:0006601!1.31e-11!102;UBERON:0003056!3.25e-11!49;UBERON:0001017!5.59e-11!73;UBERON:0005743!5.59e-11!73;UBERON:0007811!7.32e-11!86;UBERON:0000073!1.62e-10!75;UBERON:0001016!1.62e-10!75;UBERON:0002346!1.80e-10!71;UBERON:0003075!1.80e-10!71;UBERON:0007284!1.80e-10!71;UBERON:0000033!1.95e-10!63;UBERON:0002780!4.00e-10!39;UBERON:0001890!4.00e-10!39;UBERON:0006240!4.00e-10!39;UBERON:0003080!1.58e-09!40;UBERON:0001049!1.59e-09!52;UBERON:0005068!1.59e-09!52;UBERON:0006241!1.59e-09!52;UBERON:0007135!1.59e-09!52;UBERON:0002616!1.73e-08!49;UBERON:0000955!3.05e-08!50;UBERON:0006238!3.05e-08!50;UBERON:0002020!1.21e-07!34;UBERON:0002791!2.56e-07!29;UBERON:0003528!2.56e-07!29;UBERON:0001893!2.56e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0003056,6.65e-12,49;UBERON:0010314,6.99e-11,92;UBERON:0002780,9.00e-11,39;UBERON:0001890,9.00e-11,39;UBERON:0006240,9.00e-11,39;UBERON:0004121,1.28e-10,95;UBERON:0000924,1.28e-10,95;UBERON:0006601,1.28e-10,95;UBERON:0001017,1.66e-10,73;UBERON:0002346,1.74e-10,64;UBERON:0003075,1.74e-10,64;UBERON:0007284,1.74e-10,64;UBERON:0010371,2.59e-10,73;UBERON:0003080,4.34e-10,40;UBERON:0001016,6.63e-10,75;UBERON:0002616,1.23e-09,46;UBERON:0001049,1.82e-09,52;UBERON:0005068,1.82e-09,52;UBERON:0006241,1.82e-09,52;UBERON:0007135,1.82e-09,52;UBERON:0000073,2.56e-09,54;UBERON:0000955,4.56e-09,47;UBERON:0006238,4.56e-09,47;UBERON:0002020,5.08e-08,34;UBERON:0003528,9.40e-08,29;UBERON:0002791,9.40e-08,29;UBERON:0001893,9.40e-08,29;UBERON:0000483,5.48e-07,174;UBERON:0000956,7.84e-07,21;UBERON:0001869,7.84e-07,21;UBERON:0000203,7.84e-07,21
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0.903863264091034,0.281577444303333,0.936258105287974,0,0,1.36960583944965,1.83582845079895,1.33243904726265,0,0,0.315462165358238,0.548457734422955,0,0.850432901510698,2.38298282882125,0.261199789138935,0.159992422793407,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.664938581433969,0.816677425049476,6.69650609179052,6.2506827561904,4.18818995179039,9.41170380849623,6.14740936462601,3.39857247121808,2.01434908760924,1.62203089951223,1.46837401729345,7.04152209913235,2.8343270329458,1.97717564461025,4.08302788055995,3.07970127575798,2.87505128729943,0.671130424230945,0.725362142011344,0.672187598284928,2.57259436035947,1.43266719969378,2.06268836910977,4.04632921719196,2.11596391708813,1.90149421051854,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,1.4209602298922,1.49800055259202,4.2264013585371,2.28117147078651,2.8351247049655,3.99617426567626,1.99955689082663,0.662605622854841,3.79721477566358,3.54628242767475,5.51531271966013,0,1.0214987046815,1.68967186581868,2.2420668914133,3.20206752608434,2.08365348222704,1.3959149950069,1.12552522006336,0.61119299110724,2.35702868378934,2.27794689278565,2.42319279572891,1.06016670666458,0.831287161174641,1.15945795480671,0,2.719885334831,0.539703191637817,0.649776417447669,0,0.421333260395256,1.02258193546835,1.29893002301434,0.35333957451034,4.50698943285378,1.28326477414318,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0.91347103775248,0.776813650941515,0.890652834388949,1.56136794089522,1.82679286987285,1.15307748628029,0.904335843315735,2.82212897125692,1.13099932196708,0.741584903203122,2.31358971071859,0,0.970601099684455,0.883366073841574,0,0,0.878342391034642,1.04723353406728,1.27728527604296,2.15667224110656,1.19980546198682,2.28726408731516,0.599162557619291,4.57500602818627,7.91622418311046,2.9550134432687,3.83573185995496,2.0778804455956,1.94689515681309,2.95334155165917,0.746441823660558,0.758168275301024,3.36706969418358,2.99277018814219,2.29902104433473,2.16074555766419,1.9591626318643,3.40182495756639,1.66547836370305,1.03071897015702,1.81092359517311,1.5089759505299,2.64748512234947,3.16712023495108,4.16471891612392,3.89266148915837,1.0447564995665,0.61734640922383,0.59710280045548,3.51106593656617,2.31613116403244,1.98914449576915,2.89976081549703,3.28336483973535,1.98068267607116,2.13070262026689,1.18058539048442,1.3884040159864,1.16266972375204,2.41446061259657,2.91913355917924,1.15191894939436,0.985004784474571,1.4592385718254,0.438599962275997,0,1.07365135008297,2.94405927989778,5.45394445610208,0,0,2.98603550749328,3.25131340604614,0.902072229254653,0.201683524623343,0.667134131534611,0.380451252225118,0.474529061544512,0.494096864172033,0.502670417600539,2.58643413653496,1.16978452271472,0.898819408654221,0,0.398282546508734,4.36236172192088,1.5994791765362,0,1.4255592949172,2.52138233317913,2.66516115583211,0.885311519739602,1.03327103585722,0.156998727841375,0.863780147452604,0,0.500535317148282,1.17935397067922,0.449724224769707,1.21716072833102,0.964708639009667,0.50925170356284,1.43848068725405,2.43202840162553,0.274561413188081,1.43768206527355,2.97712758134803,0.312037673114561,0,0.538192240565737,0.482443521363367,0.923765950833023,2.4633883530163,2.28150967018836,2.37643120085263,1.40814148973101,1.84256883185997,1.90434912708811,0.390267295715598,2.20689201748667,2.21464689648775,2.07291199254733,0.655453258862952,1.03610989119537,1.01254341007058,0,2.17562273527484,0.983528546038072,1.93155722413313,1.76605648986571,0.703270119553219,1.14754461763673,1.26235463602186,0.94652465824877,0.780877488593277,2.15423397732799,2.15071918157297,1.78238939265915,1.13230612315533,2.83367491172426,2.92255857911312,0.790575555893047,0.963963949265421,1.56134093729095,1.6025904330053,2.44330439030364,0.824850614862677,0,1.69946445308487,0.604647113929502,2.64047111658257,0.295301892880773,0.614870295887855,1.29214146584111,1.09060118843252,0.712994756769443,1.58018378967908,1.05418608574999,2.06271086496374,1.02131881726136,3.96134406868882,4.13947788104814,4.07240366560025,2.12808280370728,2.85390108163313,3.29098041204242,3.34911444026059,0.23467170806371,0.847328283455281,0.661585194164886,0.98931751764888,2.26050197374268,0.784068024066026,1.43246812803764,1.14898629821543,0.582961673259701,0.927126510052548,0.512612642393558,1.857481811669,0.740778109478847,0.376736914009382,0.956859594047176,0,1.18984900995699,1.6794174278839,1.52019971184866,1.90934123603023,3.63786392618306,0.813277868507395,1.62008011232702,0.836353184057875,1.74690050996942,0.404593039154462,1.57041565878138,1.04702376793612,0.129614973291793,1.86401793926078,0.56369293868419,1.34564891439581,1.82004339502807,0.583353565032143,1.42075805825504,1.35164900392623,2.11243029562357,1.3020438484395,1.15345278868282,0.483168241652012,0.288030006257865,6.32022241256356,0.608175645870493,1.74608627180206,1.42912905275575,2.68540043501222,2.58285761215644,3.24527713703916,2.65841148914239,2.22126189885925,2.362411006305,3.62974266492626,4.77543615624787,3.07877893249054,4.55819918508119,0.226730383615211,0.887943813496259,1.25599399253266,0.503653849092235,0.965947970160952,0.563047426353546,0.549454872801795,0.857473516316263,0,1.6942555278512,0.460325236507177,2.86447756719698,3.26521046453006,1.37016503954128,1.5107877947794,1.35004500046361,5.40385443869065,1.35942722695261,5.69536342927002,1.66059756134683,3.99024873401031,3.41467211508268,2.18796045361465,1.88651846365184,1.2869045591501,0.888986911206461,1.03017528619447,0.64183841918363,0.758091635291392,1.2673964994512,1.32038438970253,0.561849044819294,1.34452820050225,1.26358031702349,0,0.695305955669133,1.54327376370964,0.412085900803307,0.883193520806384,1.37147700954166,0.887379030796687,0.953744759789284,1.0174249164263,0.188218760830661,0.676916863133412,1.28049581010941,0.263069711437843,0.679020569229309,0,0.593175090620871,0.886540341380071,1.22769312950907,0.929621047115796,1.15743966588685,2.99772693525535,1.87145286756327,5.58664740525576,3.44318997723918,3.08827986767322,0.927471342481686
|short_description=p6@Lmo4
}}

Latest revision as of 18:03, 1 October 2015

Short description:p6@Lmo4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Lmo4_5end
Coexpression cluster:NA
Association with transcript: 301bp_to_ENSMUST00000134961_5end
EntrezGene:Lmo4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Lmo4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E32.92
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G72.67
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C74.14
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E43.63
thymus, neonate N20.CNhs11186.820-7A24.78
thymus, neonate N25.CNhs11125.1362-25G73.08
thymus, neonate N30.CNhs11132.1393-42G24.56
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate6.65e-1249
structure with developmental contribution from neural crest6.99e-1192
regional part of forebrain9.00e-1139
forebrain9.00e-1139
future forebrain9.00e-1139
ectoderm-derived structure1.28e-1095
ectoderm1.28e-1095
presumptive ectoderm1.28e-1095
central nervous system1.66e-1073
neurectoderm1.74e-1064
neural plate1.74e-1064
presumptive neural plate1.74e-1064
ecto-epithelium2.59e-1073
anterior neural tube4.34e-1040
nervous system6.63e-1075
regional part of brain1.23e-0946
neural tube1.82e-0952
neural rod1.82e-0952
future spinal cord1.82e-0952
neural keel1.82e-0952
regional part of nervous system2.56e-0954
brain4.56e-0947
future brain4.56e-0947
gray matter5.08e-0834
brain grey matter9.40e-0829
regional part of telencephalon9.40e-0829
telencephalon9.40e-0829
epithelium5.48e-07174
cerebral cortex7.84e-0721
cerebral hemisphere7.84e-0721
pallium7.84e-0721
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