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FFCP PHASE1:Mm9::chr8:17535661..17535677,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=94109
|EntrezGene=94109
|HGNC=
|HGNC=
|MCL_coexpression_id=63
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-75bp_to_ENSMUST00000137947_5end
|association_with_transcript=-75bp_to_ENSMUST00000137947_5end
|cluster_id=chr8:17535661..17535677,-
|description=CAGE_peak_5_at_Csmd1_5end
|description=CAGE_peak_5_at_Csmd1_5end
|id=chr8:17535661..17535677,-
|id=chr8:17535661..17535677,-
|ontology_enrichment_celltype=CL:0000221!1.13e-14!44;CL:0000133!1.13e-14!44;CL:0002319!2.22e-14!43;CL:0000055!2.99e-14!50;CL:0000393!2.93e-13!39;CL:0000211!2.93e-13!39;CL:0000540!7.71e-13!33;CL:0000047!7.71e-13!33;CL:0000031!7.71e-13!33;CL:0000404!7.71e-13!33;CL:0000117!7.16e-09!23;CL:0000337!7.16e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000393,1.05e-16,39;CL:0000211,1.05e-16,39;CL:0000540,1.09e-14,33;CL:0000047,1.09e-14,33;CL:0000031,1.09e-14,33;CL:0000404,1.09e-14,33;CL:0002319,3.47e-13,43;CL:0000221,9.32e-13,44;CL:0000133,9.32e-13,44;CL:0000117,3.03e-12,23;CL:0000337,3.03e-12,23;CL:0002321,9.28e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.88e-23!75;UBERON:0001016!1.88e-23!75;UBERON:0004121!3.20e-22!102;UBERON:0000924!3.20e-22!102;UBERON:0006601!3.20e-22!102;UBERON:0001017!3.79e-22!73;UBERON:0005743!3.79e-22!73;UBERON:0002020!1.04e-14!34;UBERON:0000033!1.56e-13!63;UBERON:0002346!2.02e-13!71;UBERON:0003075!2.02e-13!71;UBERON:0007284!2.02e-13!71;UBERON:0001049!4.48e-13!52;UBERON:0005068!4.48e-13!52;UBERON:0006241!4.48e-13!52;UBERON:0007135!4.48e-13!52;UBERON:0000955!5.35e-12!50;UBERON:0006238!5.35e-12!50;UBERON:0002791!1.41e-11!29;UBERON:0003528!1.41e-11!29;UBERON:0001893!1.41e-11!29;UBERON:0002616!1.72e-11!49;UBERON:0003056!7.35e-10!49;UBERON:0003080!9.78e-10!40;UBERON:0002780!1.56e-09!39;UBERON:0001890!1.56e-09!39;UBERON:0006240!1.56e-09!39;UBERON:0000956!1.64e-09!21;UBERON:0001869!1.64e-09!21;UBERON:0000203!1.64e-09!21;UBERON:0002021!3.12e-08!10;UBERON:0000411!3.12e-08!10;UBERON:0001950!3.12e-08!10;UBERON:0007811!4.86e-08!86;UBERON:0002619!5.77e-08!17;UBERON:0000153!4.96e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.53e-25,75;UBERON:0001017,1.32e-24,73;UBERON:0002020,1.34e-21,34;UBERON:0004121,1.10e-20,95;UBERON:0000924,1.10e-20,95;UBERON:0006601,1.10e-20,95;UBERON:0000073,5.12e-18,54;UBERON:0002021,2.90e-17,10;UBERON:0000411,2.90e-17,10;UBERON:0001950,2.90e-17,10;UBERON:0003528,4.01e-15,29;UBERON:0002791,4.01e-15,29;UBERON:0001893,4.01e-15,29;UBERON:0001049,1.87e-14,52;UBERON:0005068,1.87e-14,52;UBERON:0006241,1.87e-14,52;UBERON:0007135,1.87e-14,52;UBERON:0002619,6.41e-13,17;UBERON:0000956,1.39e-11,21;UBERON:0001869,1.39e-11,21;UBERON:0000203,1.39e-11,21;UBERON:0002346,1.50e-11,64;UBERON:0003075,1.50e-11,64;UBERON:0007284,1.50e-11,64;UBERON:0002780,2.42e-11,39;UBERON:0001890,2.42e-11,39;UBERON:0006240,2.42e-11,39;UBERON:0003080,6.16e-11,40;UBERON:0000955,9.01e-11,47;UBERON:0006238,9.01e-11,47;UBERON:0010371,2.15e-10,73;UBERON:0002616,6.29e-10,46;UBERON:0001948,8.51e-09,5;UBERON:0002315,8.51e-09,5;UBERON:0003056,4.76e-08,49;UBERON:0000947,2.20e-07,4;UBERON:0001637,2.20e-07,4;UBERON:0004573,2.20e-07,4;UBERON:0003509,2.20e-07,4;UBERON:0004571,2.20e-07,4;UBERON:0010191,2.20e-07,4;UBERON:0004572,2.20e-07,4;UBERON:0002240,3.03e-07,6;UBERON:0005174,3.03e-07,6;UBERON:0001137,3.03e-07,6
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,2.12891555560981,4.58866880404204,0,0.436050312760893,0.219686182734472,0.777719596297134,0.699932108126813,0,0,0,0,0,0.286533439938757,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,3.1496490104849,0.988866362566974,0,5.69240209984969,0.768436610643109,0.933206510776299,0.540023753326763,0.841299845405528,2.57085885963423,1.54607978666129,0.489963196859816,0.0958454710182364,0,2.20231761998777,2.55374676170375,1.22885226604995,1.18697658957174,1.09785172322892,0.52091337055676,0,2.25105044012672,1.5279824777681,2.65165726926301,1.85083185038834,3.16879057903011,0.984440513331393,8.01058537131927,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,25.1169747137757,0.890652834388949,0,0,0.230615497256059,0.301445281105245,0.470354828542819,0,0,1.15679485535929,1.76922110389975,0.485300549842228,0.220841518460394,0,0,0,0.628340120440365,0.255457055208591,0,0,0,0.449371918214468,3.20250421973039,0.251308704225729,1.39059456153821,3.3243009452943,0.41557608911912,1.62241263067758,0.203678727700633,0.622034853050465,0.252722758433675,0.631325567659422,0,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0,0.268412837520744,1.89260953707715,1.02904612379284,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0.432276099749388,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,1.12385412991454,0.937693492737625,0,0.252470927204373,0.631016438832513,0.390438744296638,1.29254038639679,0.716906393857656,1.78238939265915,1.98153571552183,1.61924280669958,2.92255857911312,0.395287777946524,1.60660658210904,3.12268187458191,0.178065603667255,0.488660878060728,0.824850614862677,1.32745138339963,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0.177340233642274,0.535106452806212,0.329098041204242,0,0,0,0.441056796109924,3.2977250588296,0.161464426695906,0,0,0.164140899745061,0.582961673259701,0.741701208042039,2.05045056957423,0,0,0.565105371014073,0.683471138605126,0.457556346413045,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.26175594198403,0.129614973291793,1.24267862617385,0.56369293868419,0,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0.948033361884535,0.202725215290164,0.205421914329655,0.25984164595559,0,0,0.120195449519969,0,0,0,0.100826185136841,0.292373642219257,0.192423683280659,0.233753804363138,0.680191150845634,0,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.428736758158132,0,3.3885110557024,1.84130094602871,2.29158205375759,4.29632955859219,4.11049511862385,2.2661816921691,4.05013500139084,2.70192721934532,1.35942722695261,4.65984280576638,0,0.798049746802062,0.341467211508268,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.402048282689293,1.90517476513229,0.463537303779422,0.38581844092741,0.824171801606613,0.588795680537589,0.685738504770831,0.532427418478012,0,1.0174249164263,0.470546902076653,0.25384382367503,0,0.789209134313529,0.407412341537585,1.12228454331548,0.237270036248348,0.0985044823755635,0.818462086339379,0.619747364743864,0,0.749431733813838,0.935726433781634,0,0.382576664137687,0.220591419119515,0.463735671240843
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,2.12891555560981,4.58866880404204,0,0.436050312760893,0.219686182734472,0.777719596297134,0.699932108126813,0,0,0,0,0,0.286533439938757,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,3.1496490104849,0.988866362566974,0,5.69240209984969,0.768436610643109,0.933206510776299,0.540023753326763,0.841299845405528,2.57085885963423,1.54607978666129,0.489963196859816,0.0958454710182364,0,2.20231761998777,2.55374676170375,1.22885226604995,1.18697658957174,1.09785172322892,0.52091337055676,0,2.25105044012672,1.5279824777681,2.65165726926301,1.85083185038834,3.16879057903011,0.984440513331393,8.01058537131927,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,25.1169747137757,0.890652834388949,0,0,0.230615497256059,0.301445281105245,0.470354828542819,0,0,1.15679485535929,1.76922110389975,0.485300549842228,0.220841518460394,0,0,0,0.628340120440365,0.255457055208591,0,0,0,0.449371918214468,3.20250421973039,0.251308704225729,1.39059456153821,3.3243009452943,0.41557608911912,1.62241263067758,0.203678727700633,0.622034853050465,0.252722758433675,0.631325567659422,0,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0,0.268412837520744,1.89260953707715,1.02904612379284,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0.432276099749388,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,1.12385412991454,0.937693492737625,0,0.252470927204373,0.631016438832513,0.390438744296638,1.29254038639679,0.716906393857656,1.78238939265915,1.98153571552183,1.61924280669958,2.92255857911312,0.395287777946524,1.60660658210904,3.12268187458191,0.178065603667255,0.488660878060728,0.824850614862677,1.32745138339963,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0.177340233642274,0.535106452806212,0.329098041204242,0,0,0,0.441056796109924,3.2977250588296,0.161464426695906,0,0,0.164140899745061,0.582961673259701,0.741701208042039,2.05045056957423,0,0,0.565105371014073,0.683471138605126,0.457556346413045,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.26175594198403,0.129614973291793,1.24267862617385,0.56369293868419,0,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0.948033361884535,0.202725215290164,0.205421914329655,0.25984164595559,0,0,0.120195449519969,0,0,0,0.100826185136841,0.292373642219257,0.192423683280659,0.233753804363138,0.680191150845634,0,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.428736758158132,0,3.3885110557024,1.84130094602871,2.29158205375759,4.29632955859219,4.11049511862385,2.2661816921691,4.05013500139084,2.70192721934532,1.35942722695261,4.65984280576638,0,0.798049746802062,0.341467211508268,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.402048282689293,1.90517476513229,0.463537303779422,0.38581844092741,0.824171801606613,0.588795680537589,0.685738504770831,0.532427418478012,0,1.0174249164263,0.470546902076653,0.25384382367503,0,0.789209134313529,0.407412341537585,1.12228454331548,0.237270036248348,0.0985044823755635,0.818462086339379,0.619747364743864,0,0.749431733813838,0.935726433781634,0,0.382576664137687,0.220591419119515,0.463735671240843
|short_description=p5@Csmd1
|short_description=p5@Csmd1
}}
}}

Latest revision as of 19:41, 1 October 2015

Short description:p5@Csmd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Csmd1_5end
Coexpression cluster:MCL_coexpression_mm9:63
Association with transcript: -75bp_to_ENSMUST00000137947_5end
EntrezGene:Csmd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Csmd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F98.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H925.12
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell1.05e-1639
electrically active cell1.05e-1639
neuron1.09e-1433
neuronal stem cell1.09e-1433
neuroblast1.09e-1433
electrically signaling cell1.09e-1433
neural cell3.47e-1343
ectodermal cell9.32e-1344
neurectodermal cell9.32e-1344
CNS neuron (sensu Vertebrata)3.03e-1223
neuroblast (sensu Vertebrata)3.03e-1223
embryonic cell9.28e-0970

Uber anatomy
Ontology termp-valuen
nervous system1.53e-2575
central nervous system1.32e-2473
gray matter1.34e-2134
ectoderm-derived structure1.10e-2095
ectoderm1.10e-2095
presumptive ectoderm1.10e-2095
regional part of nervous system5.12e-1854
occipital lobe2.90e-1710
visual cortex2.90e-1710
neocortex2.90e-1710
brain grey matter4.01e-1529
regional part of telencephalon4.01e-1529
telencephalon4.01e-1529
neural tube1.87e-1452
neural rod1.87e-1452
future spinal cord1.87e-1452
neural keel1.87e-1452
regional part of cerebral cortex6.41e-1317
cerebral cortex1.39e-1121
cerebral hemisphere1.39e-1121
pallium1.39e-1121
neurectoderm1.50e-1164
neural plate1.50e-1164
presumptive neural plate1.50e-1164
regional part of forebrain2.42e-1139
forebrain2.42e-1139
future forebrain2.42e-1139
anterior neural tube6.16e-1140
brain9.01e-1147
future brain9.01e-1147
ecto-epithelium2.15e-1073
regional part of brain6.29e-1046
regional part of spinal cord8.51e-095
gray matter of spinal cord8.51e-095
pre-chordal neural plate4.76e-0849
aorta2.20e-074
artery2.20e-074
systemic artery2.20e-074
arterial blood vessel2.20e-074
systemic arterial system2.20e-074
aortic system2.20e-074
arterial system2.20e-074
spinal cord3.03e-076
dorsal region element3.03e-076
dorsum3.03e-076
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