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(Created page with "{{f5samples |id=FF:10041-101F5 |name=dura mater, adult, donor1 |sample_id=10041 |rna_tube_id=101F5 |rna_box=101 |rna_position=F5 |sample_cell_lot=NA |sample_cell_catal...")
 
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{{f5samples
{{f5samples
|id=FF:10041-101F5
|DRA_sample_Accession=CAGE@SAMD00005192
|name=dura mater, adult, donor1
|accession_numbers=CAGE;DRX008647;DRR009519;DRZ000944;DRZ002329;DRZ012294;DRZ013679
|sample_id=10041
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0002363,UBERON:0002360,UBERON:0000479,UBERON:0004121,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000094,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0010743
|rna_tube_id=101F5
|rna_box=101
|rna_position=F5
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Clontech
|rna_lot_number=3040808.00000
|rna_catalog_number=Cat:636588
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=59 years old adult
|sample_tissue=dura mater
|sample_donor(cell lot)=1.00000
|sample_sex=female
|sample_age=
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=50.00000
|rna_concentration=
|sample_note=
|profile_hcage=CNhs10648,LSID658,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000073,UBERON:0000094,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000926,UBERON:0001016,UBERON:0001017,UBERON:0001062,UBERON:0002050,UBERON:0002342,UBERON:0002346,UBERON:0002360,UBERON:0002363,UBERON:0002532,UBERON:0003075,UBERON:0004120,UBERON:0004121,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007284,UBERON:0007645,UBERON:0007647
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010041
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.04!108.05!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.03!105.84!SPI1;;chr1:170632285..170632309,+!p1@PRRX1!1.96!102.49!PRRX1;;chr16:85932760..85932775,+!p1@IRF8!1.74!54.34!IRF8;;chr21:39870339..39870443,-!p1@ERG!1.71!50.42!ERG;;chr2:45236540..45236577,-!p1@SIX2!1.65!43.60!SIX2;;chr20:39317868..39317884,-!p1@MAFB!1.64!480.91!MAFB;;chr11:113930425..113930471,+!p1@ZBTB16!1.64!60.09!ZBTB16;;chr3:147127142..147127168,+!p1@ZIC1!1.63!41.20!ZIC1;;chr17:53344945..53344977,+!p2@HLF!1.62!40.94!HLF;;chr1:40105299..40105326,-!p1@HEYL!1.58!37.15!HEYL;;chr13:100634031..100634045,+!p1@ZIC2!1.58!37.03!ZIC2;;chr1:170633348..170633399,+!p2@PRRX1!1.57!48.53!PRRX1;;chr11:47399947..47399961,-!p3@SPI1!1.55!34.44!SPI1;;chr11:47400062..47400077,-!p2@SPI1!1.55!34.37!SPI1;;chr17:38256799..38256815,-!p3@NR1D1!1.52!57.50!NR1D1;;chr14:61116183..61116208,-!p1@SIX1!1.51!114.81!SIX1;;chr20:62680984..62680999,-!p1@SOX18!1.51!41.45!SOX18;;chr1:170632477..170632506,+!p6@PRRX1!1.51!31.53!PRRX1;;chr3:147127177..147127194,+!p2@ZIC1!1.51!31.40!ZIC1;;chr17:53342311..53342400,+!p1@HLF!1.50!34.88!HLF;;chr3:71630980..71631110,-!p3@FOXP1!1.48!98.89!FOXP1;;chr17:53344980..53345011,+!p3@HLF!1.48!29.26!HLF;;chr6:1610293..1610310,+!p1@FOXC1!1.45!44.67!FOXC1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.44!26.79!ZBED1;;chr12:26277817..26277863,-!p2@BHLHE41!1.43!34.75!BHLHE41;;chr5:88178983..88179012,-!p1@MEF2C!1.42!187.35!MEF2C;;chr12:54778471..54778528,-!p1@ZNF385A!1.41!24.71!ZNF385A;;chr1:47903709..47903764,+!p1@BC169308!1.38!25.91!FOXD2;;chr16:86600426..86600441,+!p1@FOXC2!1.34!50.36!FOXC2;;chr1:170633262..170633285,+!p3@PRRX1!1.33!23.38!PRRX1;;chr19:46801639..46801699,+!p1@HIF3A!1.32!19.97!HIF3A;;chr11:44331576..44331650,-!p1@ALX4!1.32!19.78!ALX4;;chr5:122424955..122424988,+!p2@PRDM6!1.31!19.65!PRDM6;;chr2:145277640..145277771,-!p1@ZEB2!1.30!248.20!ZEB2;;chr1:170632683..170632696,+!p12@PRRX1!1.29!18.70!PRRX1;;chr9:132427972..132428056,+!p1@PRRX2!1.28!23.51!PRRX2;;chr6:45296048..45296082,+!p1@RUNX2!1.28!20.60!RUNX2;;chr1:170632115..170632136,+!p9@PRRX1!1.28!18.20!PRRX1;;chr7:96654133..96654150,-!p1@DLX5!1.28!18.13!DLX5;;chr5:122424918..122424944,+!p1@PRDM6!1.28!18.07!PRDM6;;chr7:44143925..44143970,+!p1@AEBP1!1.26!370.91!AEBP1;;chr1:170632723..170632739,+!p8@PRRX1!1.26!17.19!PRRX1;;chr4:26165074..26165110,+!p9@RBPJ!1.26!17.19!RBPJ;;chr1:170632137..170632172,+!p10@PRRX1!1.25!16.87!PRRX1;;chr5:158526917..158526932,-!p1@EBF1!1.22!38.16!EBF1;;chr1:170632959..170632987,+!p4@PRRX1!1.22!16.93!PRRX1;;chr17:38256822..38256851,-!p1@NR1D1!1.21!116.71!NR1D1;;chr4:4861385..4861398,+!p1@MSX1!1.21!44.93!MSX1;;chr7:115670804..115670825,-!p1@TFEC!1.20!14.72!TFEC;;chr7:113726357..113726443,+!p1@FOXP2!1.19!25.15!FOXP2;;chr11:47399996..47400014,-!p4@SPI1!1.19!14.66!SPI1;;chr7:63505799..63505904,+!p1@ZNF727!1.19!14.60!ZNF727;;chr1:119530706..119530736,-!p3@TBX15!1.18!14.09!TBX15;;chr1:170632439..170632465,+!p11@PRRX1!1.18!14.03!PRRX1;;chr11:113930291..113930339,+!p2@ZBTB16!1.17!22.24!ZBTB16;;chr6:19837592..19837621,+!p1@ID4!1.16!81.07!ID4;;chrX:106960180..106960197,-!p2@TSC22D3!1.15!50.30!TSC22D3;;chr7:44143978..44143989,+!p2@AEBP1!1.15!24.07!AEBP1;;chr11:47400032..47400043,-!p5@SPI1!1.15!13.08!SPI1;;chr11:125034640..125034655,+!p1@PKNOX2!1.14!12.70!PKNOX2;;chr19:45971246..45971265,+!p1@FOSB!1.12!224.69!FOSB;;chr19:13134772..13134822,+!p2@NFIX!1.11!17.69!NFIX;;chr1:119530493..119530572,-!p1@TBX15!1.11!12.01!TBX15;;chr7:50344289..50344323,+!p1@IKZF1!1.11!11.75!IKZF1;;chr12:26277956..26277980,-!p1@BHLHE41!1.10!42.02!BHLHE41;;chr7:137620684..137620711,-!p4@CREB3L2!1.10!11.50!CREB3L2;;chr5:92918919..92918942,+!p1@NR2F1!1.09!51.05!NR2F1;;chr6:391743..391759,+!p1@IRF4!1.09!11.44!IRF4;;chr11:44331679..44331702,-!p2@ALX4!1.09!11.44!ALX4;;chr11:113930401..113930422,+!p3@ZBTB16!1.07!10.80!ZBTB16;;chr19:16435625..16435682,+!p1@KLF2!1.06!338.62!KLF2;;chr1:61548374..61548415,+!p4@NFIA!1.06!19.84!NFIA;;chr9:132427883..132427951,+!p2@PRRX2!1.06!10.55!PRRX2;;chr11:111249993..111250006,-!p1@POU2AF1!1.06!10.49!POU2AF1;;chr11:47400045..47400060,-!p6@SPI1!1.06!10.43!SPI1;;chr9:73028814..73028895,-!p1@KLF9!1.05!103.12!KLF9;;chrX:106960285..106960299,-!p1@TSC22D3!1.04!273.35!TSC22D3;;chr9:114287433..114287513,+!p1@ZNF483!1.04!26.10!ZNF483;;chr7:44143997..44144008,+!p3@AEBP1!1.04!12.83!AEBP1;;chr7:15726243..15726293,-!p2@MEOX2!1.04!9.98!MEOX2;;chr9:110252035..110252057,-!p1@KLF4!1.03!155.88!KLF4;;chr12:11802753..11802834,+!p2@ETV6!1.03!47.83!ETV6;;chr16:79633894..79633954,-!p3@MAF!1.03!19.02!MAF;;chr8:55370487..55370503,+!p1@SOX17!1.03!9.73!SOX17;;chr18:42260920..42260951,+!p4@SETBP1!1.03!9.67!SETBP1;;chr16:79634624..79634642,-!p1@MAF!1.02!38.04!MAF;;chr18:42260840..42260860,+!p2@SETBP1!1.02!9.41!SETBP1;;chr2:145277882..145277967,-!p3@ZEB2!1.01!16.24!ZEB2;;chr5:158526459..158526481,-!p2@EBF1!1.01!12.26!EBF1;;chr20:50179368..50179392,-!p2@NFATC2!1.01!12.13!NFATC2;;chr6:126240442..126240459,+!p4@NCOA7!1.01!11.75!NCOA7;;chr1:170632250..17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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0010743
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0006603,UBERON:0010115,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/dura%2520mater%252c%2520adult%252c%2520donor1.CNhs10648.10041-101F5.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/dura%2520mater%252c%2520adult%252c%2520donor1.CNhs10648.10041-101F5.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/dura%2520mater%252c%2520adult%252c%2520donor1.CNhs10648.10041-101F5.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/dura%2520mater%252c%2520adult%252c%2520donor1.CNhs10648.10041-101F5.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/dura%2520mater%252c%2520adult%252c%2520donor1.CNhs10648.10041-101F5.hg38.nobarcode.ctss.bed.gz
|id=FF:10041-101F5
|is_a=EFO:0002091;;FF:0010041
|is_obsolete=
|library_id=CNhs10648
|library_id_phase_based=2:CNhs10648
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10041
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10041
|name=dura mater, adult, donor1
|namespace=FANTOM5
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|profile_hcage=CNhs10648,LSID658,release008,COMPLETED
|profile_rnaseq=
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|rna_box=101
|rna_catalog_number=Cat:636588
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=3040808
|rna_od260/230=
|rna_od260/280=
|rna_position=F5
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=101F5
|rna_weight_ug=50
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Clontech
|sample_description=
|sample_dev_stage=59 years old adult
|sample_disease=normal
|sample_donor(cell lot)=1
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.48995056993039e-256!GO:0005737;cytoplasm;1.31102669814177e-150!GO:0043226;organelle;2.51902781083901e-112!GO:0043229;intracellular organelle;6.34638135132831e-112!GO:0005515;protein binding;2.33449575978051e-110!GO:0043227;membrane-bound organelle;1.16505354473329e-108!GO:0043231;intracellular membrane-bound organelle;1.76662176284009e-108!GO:0044444;cytoplasmic part;2.82671779703874e-88!GO:0044422;organelle part;1.60988807978377e-70!GO:0044446;intracellular organelle part;5.42654619293159e-69!GO:0032991;macromolecular complex;6.5993555763359e-61!GO:0016043;cellular component organization and biogenesis;4.27772823271828e-55!GO:0043170;macromolecule metabolic process;2.2260012861963e-45!GO:0044238;primary metabolic process;4.86458399320205e-44!GO:0003723;RNA binding;5.65351588653354e-44!GO:0030529;ribonucleoprotein complex;1.78533140824136e-41!GO:0044237;cellular metabolic process;5.57103639624795e-41!GO:0044428;nuclear part;1.25734199729307e-40!GO:0005634;nucleus;1.77788334213944e-40!GO:0033036;macromolecule localization;1.66047954874988e-39!GO:0015031;protein transport;2.04555388614682e-38!GO:0043233;organelle lumen;3.24900222770695e-38!GO:0031974;membrane-enclosed lumen;3.24900222770695e-38!GO:0019538;protein metabolic process;3.78494054964753e-38!GO:0045184;establishment of protein localization;2.16227564559298e-37!GO:0008104;protein localization;1.2761109454095e-36!GO:0043234;protein complex;4.69692015609352e-34!GO:0044260;cellular macromolecule metabolic process;1.68468551948898e-32!GO:0046907;intracellular transport;1.18969920249462e-31!GO:0044267;cellular protein metabolic process;1.6833948434626e-31!GO:0031090;organelle membrane;6.76468707847059e-30!GO:0005829;cytosol;2.37834854527828e-28!GO:0065003;macromolecular complex assembly;7.49149598590578e-27!GO:0006886;intracellular protein transport;1.08409834951268e-26!GO:0016071;mRNA metabolic process;1.19443475524477e-26!GO:0031981;nuclear lumen;1.17346692284221e-25!GO:0051649;establishment of cellular localization;1.5370437325081e-25!GO:0051641;cellular localization;2.76821716301238e-25!GO:0022607;cellular component assembly;1.15913861314216e-24!GO:0043283;biopolymer metabolic process;3.42150736565378e-24!GO:0008380;RNA splicing;3.95102665701894e-24!GO:0006396;RNA processing;6.16140004277777e-24!GO:0006996;organelle organization and biogenesis;3.17965650752806e-23!GO:0006412;translation;3.19998922381045e-23!GO:0016192;vesicle-mediated transport;7.44064069515078e-23!GO:0005739;mitochondrion;1.57117388401543e-22!GO:0006397;mRNA processing;6.49564448845033e-22!GO:0005840;ribosome;3.75503037313511e-21!GO:0031967;organelle envelope;3.20216454303111e-20!GO:0031975;envelope;4.1125718800737e-20!GO:0008134;transcription factor binding;7.36045222182225e-20!GO:0010467;gene expression;1.25196087310214e-18!GO:0003735;structural constituent of ribosome;1.42971399119131e-18!GO:0048770;pigment granule;5.50015571729454e-18!GO:0042470;melanosome;5.50015571729454e-18!GO:0005681;spliceosome;1.51525257397556e-17!GO:0033279;ribosomal subunit;1.97833504042189e-17!GO:0005654;nucleoplasm;2.7741657031661e-17!GO:0044429;mitochondrial part;4.38173997822118e-17!GO:0009059;macromolecule biosynthetic process;1.4663090957776e-16!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.75685216311615e-16!GO:0005794;Golgi apparatus;4.22970183118831e-16!GO:0043228;non-membrane-bound organelle;5.22097318366717e-16!GO:0043232;intracellular non-membrane-bound organelle;5.22097318366717e-16!GO:0000166;nucleotide binding;1.35544256237028e-15!GO:0048523;negative regulation of cellular process;2.32556755885534e-15!GO:0044445;cytosolic part;5.10043789715165e-15!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.8680457392988e-15!GO:0005783;endoplasmic reticulum;9.37592015310428e-15!GO:0012501;programmed cell death;1.50818860264191e-14!GO:0044451;nucleoplasm part;1.91862352988578e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;2.78424878670373e-14!GO:0006915;apoptosis;3.01053737206991e-14!GO:0008219;cell death;3.68417273250456e-14!GO:0016265;death;3.68417273250456e-14!GO:0006511;ubiquitin-dependent protein catabolic process;3.89084889983295e-14!GO:0019941;modification-dependent protein catabolic process;4.16618172041738e-14!GO:0043632;modification-dependent macromolecule catabolic process;4.16618172041738e-14!GO:0044265;cellular macromolecule catabolic process;4.32482297930528e-14!GO:0044257;cellular protein catabolic process;8.28202054458463e-14!GO:0030036;actin cytoskeleton organization and biogenesis;1.00510026158319e-13!GO:0044249;cellular biosynthetic process;1.1922579494766e-13!GO:0043285;biopolymer catabolic process;1.2530650510714e-13!GO:0048519;negative regulation of biological process;1.50992020442385e-13!GO:0009058;biosynthetic process;2.23305058346171e-13!GO:0006119;oxidative phosphorylation;5.60684546792431e-13!GO:0050794;regulation of cellular process;6.29258606214434e-13!GO:0006605;protein targeting;7.15776932946607e-13!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.32924040268546e-13!GO:0005740;mitochondrial envelope;7.63765399457229e-13!GO:0043412;biopolymer modification;8.65437894092593e-13!GO:0031966;mitochondrial membrane;9.77264514945324e-13!GO:0043687;post-translational protein modification;1.08880099796938e-12!GO:0006512;ubiquitin cycle;1.43146053104593e-12!GO:0012505;endomembrane system;1.67406179692931e-12!GO:0000502;proteasome complex (sensu Eukaryota);2.38596230622156e-12!GO:0050789;regulation of biological process;2.70754637083257e-12!GO:0019866;organelle inner membrane;2.70754637083257e-12!GO:0030029;actin filament-based process;2.9629882154655e-12!GO:0006464;protein modification process;4.90798865392989e-12!GO:0030163;protein catabolic process;5.42550254322291e-12!GO:0003712;transcription cofactor activity;9.01678490199797e-12!GO:0006366;transcription from RNA polymerase II promoter;9.69684085986282e-12!GO:0006461;protein complex assembly;1.01322868877073e-11!GO:0006913;nucleocytoplasmic transport;1.03592256030133e-11!GO:0016462;pyrophosphatase activity;1.16168999835068e-11!GO:0048193;Golgi vesicle transport;1.18828955902778e-11!GO:0017111;nucleoside-triphosphatase activity;1.4709996454177e-11!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.60031494954933e-11!GO:0016817;hydrolase activity, acting on acid anhydrides;2.24455951255188e-11!GO:0051169;nuclear transport;2.32662721570664e-11!GO:0009057;macromolecule catabolic process;3.57304401161596e-11!GO:0031982;vesicle;4.34535199551232e-11!GO:0032553;ribonucleotide binding;5.29231591531748e-11!GO:0032555;purine ribonucleotide binding;5.29231591531748e-11!GO:0005743;mitochondrial inner membrane;5.56956383989348e-11!GO:0022618;protein-RNA complex assembly;7.3991975584641e-11!GO:0016604;nuclear body;9.00219515586874e-11!GO:0017076;purine nucleotide binding;1.03154916823311e-10!GO:0031988;membrane-bound vesicle;1.25527133437313e-10!GO:0031410;cytoplasmic vesicle;1.80469637776866e-10!GO:0006259;DNA metabolic process;2.35747618794366e-10!GO:0016874;ligase activity;2.53886953051735e-10!GO:0031252;leading edge;2.53886953051735e-10!GO:0016023;cytoplasmic membrane-bound vesicle;3.6638251829385e-10!GO:0008092;cytoskeletal protein binding;4.98756662913509e-10!GO:0016044;membrane organization and biogenesis;6.2481637483556e-10!GO:0005768;endosome;6.59963462940854e-10!GO:0005773;vacuole;1.02029283784491e-09!GO:0016564;transcription repressor activity;1.06731942932487e-09!GO:0006457;protein folding;1.16947574844198e-09!GO:0005793;ER-Golgi intermediate compartment;1.31774859890559e-09!GO:0016607;nuclear speck;1.36111294513555e-09!GO:0006793;phosphorus metabolic process;1.86332564508835e-09!GO:0006796;phosphate metabolic process;1.86332564508835e-09!GO:0015935;small ribosomal subunit;1.99227983947358e-09!GO:0065007;biological regulation;2.58064413619658e-09!GO:0044432;endoplasmic reticulum part;2.73004408419216e-09!GO:0000323;lytic vacuole;3.10321027846118e-09!GO:0005764;lysosome;3.10321027846118e-09!GO:0044248;cellular catabolic process;3.61529748706487e-09!GO:0044455;mitochondrial membrane part;3.61529748706487e-09!GO:0008565;protein transporter activity;4.27980763653369e-09!GO:0007242;intracellular signaling cascade;5.35431264858933e-09!GO:0007264;small GTPase mediated signal transduction;5.92291408509504e-09!GO:0008639;small protein conjugating enzyme activity;7.71186024542239e-09!GO:0007243;protein kinase cascade;7.96246061188165e-09!GO:0015934;large ribosomal subunit;8.58891105400278e-09!GO:0007049;cell cycle;9.06761445421333e-09!GO:0004842;ubiquitin-protein ligase activity;9.4977224354788e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;9.82909727185332e-09!GO:0003676;nucleic acid binding;1.1764823341951e-08!GO:0006950;response to stress;1.254256850639e-08!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.70940724715588e-08!GO:0017038;protein import;1.77422371670389e-08!GO:0005746;mitochondrial respiratory chain;1.86783965244301e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;2.12047388124317e-08!GO:0000375;RNA splicing, via transesterification reactions;2.12047388124317e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.12047388124317e-08!GO:0051246;regulation of protein metabolic process;2.21157066528937e-08!GO:0008135;translation factor activity, nucleic acid binding;2.25579321123811e-08!GO:0007010;cytoskeleton organization and biogenesis;2.61753656764302e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.93849711926641e-08!GO:0019787;small conjugating protein ligase activity;3.44081308521144e-08!GO:0016481;negative regulation of transcription;3.76648348039726e-08!GO:0050136;NADH dehydrogenase (quinone) activity;3.77659071952601e-08!GO:0003954;NADH dehydrogenase activity;3.77659071952601e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.77659071952601e-08!GO:0005730;nucleolus;3.7905884146729e-08!GO:0031324;negative regulation of cellular metabolic process;3.94340885983135e-08!GO:0048522;positive regulation of cellular process;4.33893005584247e-08!GO:0003924;GTPase activity;4.34442242995168e-08!GO:0005635;nuclear envelope;5.06786605052982e-08!GO:0006606;protein import into nucleus;5.26881138954308e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.73799309222588e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.18483373041552e-08!GO:0016310;phosphorylation;6.2691375486009e-08!GO:0030695;GTPase regulator activity;6.86301369525054e-08!GO:0051170;nuclear import;7.00317182963997e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.44390132442819e-08!GO:0042981;regulation of apoptosis;8.18787182592274e-08!GO:0009966;regulation of signal transduction;8.22787916664383e-08!GO:0006897;endocytosis;9.94262684350057e-08!GO:0010324;membrane invagination;9.94262684350057e-08!GO:0006446;regulation of translational initiation;9.94262684350057e-08!GO:0016070;RNA metabolic process;1.04358293260724e-07!GO:0043067;regulation of programmed cell death;1.23056287795321e-07!GO:0019899;enzyme binding;1.23056287795321e-07!GO:0009892;negative regulation of metabolic process;1.77743937632982e-07!GO:0043069;negative regulation of programmed cell death;1.96229032404051e-07!GO:0003714;transcription corepressor activity;2.41538441330396e-07!GO:0003743;translation initiation factor activity;2.41890260146382e-07!GO:0031965;nuclear membrane;2.51076525788293e-07!GO:0043066;negative regulation of apoptosis;2.53600352712804e-07!GO:0005524;ATP binding;2.58235802461534e-07!GO:0007265;Ras protein signal transduction;2.99760894332472e-07!GO:0032559;adenyl ribonucleotide binding;3.01919189545303e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.42563107953e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.48867905641515e-07!GO:0048518;positive regulation of biological process;3.7892637717318e-07!GO:0030554;adenyl nucleotide binding;6.40213936592052e-07!GO:0048475;coated membrane;6.44286500775151e-07!GO:0030117;membrane coat;6.44286500775151e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;7.39664011670446e-07!GO:0042775;organelle ATP synthesis coupled electron transport;9.59581424229394e-07!GO:0042773;ATP synthesis coupled electron transport;9.59581424229394e-07!GO:0005788;endoplasmic reticulum lumen;9.61857299196964e-07!GO:0044440;endosomal part;1.0033804208086e-06!GO:0010008;endosome membrane;1.0033804208086e-06!GO:0006916;anti-apoptosis;1.02313850244799e-06!GO:0030964;NADH dehydrogenase complex (quinone);1.18179563746972e-06!GO:0045271;respiratory chain complex I;1.18179563746972e-06!GO:0005747;mitochondrial respiratory chain complex I;1.18179563746972e-06!GO:0043566;structure-specific DNA binding;1.1845791657393e-06!GO:0005083;small GTPase regulator activity;1.19488407884142e-06!GO:0006413;translational initiation;1.19488407884142e-06!GO:0051082;unfolded protein binding;1.24435529201835e-06!GO:0003779;actin binding;1.41506038910345e-06!GO:0016881;acid-amino acid ligase activity;1.60830396408984e-06!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.66726433886298e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.66891593686161e-06!GO:0005525;GTP binding;1.68470513807594e-06!GO:0008361;regulation of cell size;1.71022195532352e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.81891956929077e-06!GO:0016563;transcription activator activity;1.81891956929077e-06!GO:0030120;vesicle coat;1.86447712912843e-06!GO:0030662;coated vesicle membrane;1.86447712912843e-06!GO:0051186;cofactor metabolic process;1.98306382072714e-06!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.35309732447638e-06!GO:0006323;DNA packaging;2.38049495747066e-06!GO:0016049;cell growth;2.602614444762e-06!GO:0005770;late endosome;2.82102530086866e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.16501851127396e-06!GO:0009060;aerobic respiration;3.16501851127396e-06!GO:0001726;ruffle;3.19286274084952e-06!GO:0044453;nuclear membrane part;3.23494656236802e-06!GO:0051726;regulation of cell cycle;4.15480811005151e-06!GO:0005096;GTPase activator activity;4.1638170124382e-06!GO:0000074;regulation of progression through cell cycle;4.36103562223646e-06!GO:0003713;transcription coactivator activity;4.42558142066527e-06!GO:0009056;catabolic process;4.49130800953612e-06!GO:0045333;cellular respiration;4.61392409073269e-06!GO:0045786;negative regulation of progression through cell cycle;4.627810962152e-06!GO:0008047;enzyme activator activity;5.7648756573197e-06!GO:0031980;mitochondrial lumen;5.78337435032395e-06!GO:0005759;mitochondrial matrix;5.78337435032395e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.05656340529071e-06!GO:0015986;ATP synthesis coupled proton transport;7.75773364366613e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.75773364366613e-06!GO:0051276;chromosome organization and biogenesis;8.04477121017265e-06!GO:0019829;cation-transporting ATPase activity;9.19311923316435e-06!GO:0016197;endosome transport;9.20059435241936e-06!GO:0050657;nucleic acid transport;1.00898763360318e-05!GO:0051236;establishment of RNA localization;1.00898763360318e-05!GO:0050658;RNA transport;1.00898763360318e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.06973294849494e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.21420830921107e-05!GO:0030027;lamellipodium;1.22616517994678e-05!GO:0006403;RNA localization;1.23229856563466e-05!GO:0005789;endoplasmic reticulum membrane;1.27573734983102e-05!GO:0022402;cell cycle process;1.35137530602572e-05!GO:0006333;chromatin assembly or disassembly;1.46888547357596e-05!GO:0032561;guanyl ribonucleotide binding;1.50294444776268e-05!GO:0019001;guanyl nucleotide binding;1.50294444776268e-05!GO:0006613;cotranslational protein targeting to membrane;1.51478051610048e-05!GO:0001558;regulation of cell growth;2.02465914682302e-05!GO:0032446;protein modification by small protein conjugation;2.18608260092511e-05!GO:0005643;nuclear pore;2.31821715622297e-05!GO:0065004;protein-DNA complex assembly;2.49963219799075e-05!GO:0045045;secretory pathway;2.57306308275981e-05!GO:0003697;single-stranded DNA binding;2.64723740491841e-05!GO:0006099;tricarboxylic acid cycle;3.02808218758319e-05!GO:0046356;acetyl-CoA catabolic process;3.02808218758319e-05!GO:0016567;protein ubiquitination;3.08030632390913e-05!GO:0044431;Golgi apparatus part;3.08030632390913e-05!GO:0045892;negative regulation of transcription, DNA-dependent;3.97944611965941e-05!GO:0009055;electron carrier activity;4.01212938655406e-05!GO:0009150;purine ribonucleotide metabolic process;4.06232376498115e-05!GO:0032940;secretion by cell;4.13594848257577e-05!GO:0006732;coenzyme metabolic process;4.21492106886545e-05!GO:0009259;ribonucleotide metabolic process;4.21804814746039e-05!GO:0004386;helicase activity;5.063762838741e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.32608005658683e-05!GO:0006163;purine nucleotide metabolic process;5.52393306289951e-05!GO:0005769;early endosome;5.77936487300756e-05!GO:0007266;Rho protein signal transduction;5.8759004449354e-05!GO:0005798;Golgi-associated vesicle;6.54702681138799e-05!GO:0004298;threonine endopeptidase activity;7.19268618528172e-05!GO:0051187;cofactor catabolic process;7.58976474464039e-05!GO:0000151;ubiquitin ligase complex;7.74662190615207e-05!GO:0009109;coenzyme catabolic process;8.27431887188594e-05!GO:0048471;perinuclear region of cytoplasm;8.61683786467205e-05!GO:0065009;regulation of a molecular function;8.66914227126477e-05!GO:0042623;ATPase activity, coupled;8.99277832330475e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000110852424431851!GO:0009199;ribonucleoside triphosphate metabolic process;0.00012014695251461!GO:0009152;purine ribonucleotide biosynthetic process;0.00012036110388818!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000123557562713205!GO:0009144;purine nucleoside triphosphate metabolic process;0.000123557562713205!GO:0008026;ATP-dependent helicase activity;0.000126154144554716!GO:0046034;ATP metabolic process;0.000140464047919426!GO:0005761;mitochondrial ribosome;0.000145650914531895!GO:0000313;organellar ribosome;0.000145650914531895!GO:0051028;mRNA transport;0.000146398873321082!GO:0048468;cell development;0.000146844687011103!GO:0009141;nucleoside triphosphate metabolic process;0.000147505298468294!GO:0016469;proton-transporting two-sector ATPase complex;0.00015443014975328!GO:0006974;response to DNA damage stimulus;0.000161108623727162!GO:0006084;acetyl-CoA metabolic process;0.000161108623727162!GO:0006164;purine nucleotide biosynthetic process;0.000162149615315208!GO:0016887;ATPase activity;0.000162909180661786!GO:0046930;pore complex;0.000166425689738938!GO:0016568;chromatin modification;0.000178931448753117!GO:0009260;ribonucleotide biosynthetic process;0.00020497693467058!GO:0006754;ATP biosynthetic process;0.000214549845821666!GO:0006753;nucleoside phosphate metabolic process;0.000214549845821666!GO:0030133;transport vesicle;0.000219014140821247!GO:0009142;nucleoside triphosphate biosynthetic process;0.000219196941442268!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000219196941442268!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000224226580065076!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000224226580065076!GO:0045259;proton-transporting ATP synthase complex;0.000244092196990815!GO:0009967;positive regulation of signal transduction;0.00028131848197069!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000284134648360221!GO:0065002;intracellular protein transport across a membrane;0.000294870557281664!GO:0000245;spliceosome assembly;0.000301781667818928!GO:0015078;hydrogen ion transmembrane transporter activity;0.000346829237041883!GO:0000785;chromatin;0.00035401519752559!GO:0003690;double-stranded DNA binding;0.000388511590086396!GO:0030532;small nuclear ribonucleoprotein complex;0.000390218177913983!GO:0030867;rough endoplasmic reticulum membrane;0.000495899807944815!GO:0008154;actin polymerization and/or depolymerization;0.000496907082138257!GO:0040008;regulation of growth;0.000503957592567701!GO:0005774;vacuolar membrane;0.000529062743743422!GO:0006334;nucleosome assembly;0.000535609620085569!GO:0005885;Arp2/3 protein complex;0.00057796509225102!GO:0006612;protein targeting to membrane;0.000604270967949864!GO:0045893;positive regulation of transcription, DNA-dependent;0.000614010686262335!GO:0030041;actin filament polymerization;0.000633263201397419!GO:0008286;insulin receptor signaling pathway;0.000633462919293128!GO:0019838;growth factor binding;0.000642831887292414!GO:0005694;chromosome;0.000702935732422477!GO:0005667;transcription factor complex;0.000721330149734998!GO:0005791;rough endoplasmic reticulum;0.00075539874315817!GO:0045941;positive regulation of transcription;0.000785738935659523!GO:0003724;RNA helicase activity;0.000859700180687746!GO:0005765;lysosomal membrane;0.000897750281981176!GO:0043623;cellular protein complex assembly;0.000946036506551493!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00102589300077259!GO:0051427;hormone receptor binding;0.00107535464069824!GO:0000278;mitotic cell cycle;0.00111062222345491!GO:0031902;late endosome membrane;0.00111062222345491!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00112040124370352!GO:0005905;coated pit;0.0011692185429263!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00117286621520826!GO:0000139;Golgi membrane;0.00118790124719199!GO:0015980;energy derivation by oxidation of organic compounds;0.00119406609665064!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00122478231745668!GO:0042254;ribosome biogenesis and assembly;0.00134159150062651!GO:0008283;cell proliferation;0.00139276009458662!GO:0033116;ER-Golgi intermediate compartment membrane;0.00139687134429562!GO:0006607;NLS-bearing substrate import into nucleus;0.00140940523846021!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.0014883147168105!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00155540275018785!GO:0031497;chromatin assembly;0.00162695383991481!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00172992616572385!GO:0005813;centrosome;0.00173564912090412!GO:0044427;chromosomal part;0.00176886363546316!GO:0035257;nuclear hormone receptor binding;0.00190988078602966!GO:0005100;Rho GTPase activator activity;0.00194909240218813!GO:0030118;clathrin coat;0.0020704874191809!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00208429551071274!GO:0006402;mRNA catabolic process;0.00215587560301604!GO:0008250;oligosaccharyl transferase complex;0.00225383399899281!GO:0016791;phosphoric monoester hydrolase activity;0.00225383399899281!GO:0051789;response to protein stimulus;0.00225383399899281!GO:0006986;response to unfolded protein;0.00225383399899281!GO:0015630;microtubule cytoskeleton;0.00230926718115643!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00263034401003649!GO:0051128;regulation of cellular component organization and biogenesis;0.00272521854288449!GO:0044437;vacuolar part;0.00274115709430068!GO:0051056;regulation of small GTPase mediated signal transduction;0.00283195145528686!GO:0006260;DNA replication;0.00289946939074842!GO:0006281;DNA repair;0.00293264749140427!GO:0009719;response to endogenous stimulus;0.00296763408901522!GO:0005048;signal sequence binding;0.00301125033661681!GO:0030518;steroid hormone receptor signaling pathway;0.00302848871825048!GO:0008654;phospholipid biosynthetic process;0.00306022359725305!GO:0051168;nuclear export;0.00306022359725305!GO:0019222;regulation of metabolic process;0.00306807067613757!GO:0009615;response to virus;0.00314173484632086!GO:0042802;identical protein binding;0.0031669167234143!GO:0004576;oligosaccharyl transferase activity;0.00322331804621133!GO:0004674;protein serine/threonine kinase activity;0.00328343771582425!GO:0046578;regulation of Ras protein signal transduction;0.00357323093048519!GO:0006401;RNA catabolic process;0.00365507353701224!GO:0015629;actin cytoskeleton;0.00377170524474717!GO:0004721;phosphoprotein phosphatase activity;0.00385371044971569!GO:0051920;peroxiredoxin activity;0.00394714125605944!GO:0030132;clathrin coat of coated pit;0.00396806770433564!GO:0051101;regulation of DNA binding;0.0039932538349744!GO:0051188;cofactor biosynthetic process;0.0041130554177877!GO:0031589;cell-substrate adhesion;0.00414106813989561!GO:0003729;mRNA binding;0.00431207949642813!GO:0006891;intra-Golgi vesicle-mediated transport;0.00431207949642813!GO:0043021;ribonucleoprotein binding;0.00439490966117088!GO:0016301;kinase activity;0.00439490966117088!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00448433109187057!GO:0030663;COPI coated vesicle membrane;0.00455392426679492!GO:0030126;COPI vesicle coat;0.00455392426679492!GO:0050790;regulation of catalytic activity;0.00469438350545451!GO:0048500;signal recognition particle;0.00493813645190781!GO:0008186;RNA-dependent ATPase activity;0.00500850014753055!GO:0005741;mitochondrial outer membrane;0.00524599435747799!GO:0017166;vinculin binding;0.00524877277047451!GO:0033673;negative regulation of kinase activity;0.00524877277047451!GO:0006469;negative regulation of protein kinase activity;0.00524877277047451!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00537384677814306!GO:0016363;nuclear matrix;0.00546674242886458!GO:0009893;positive regulation of metabolic process;0.00568558173901757!GO:0006979;response to oxidative stress;0.00624704658774557!GO:0005815;microtubule organizing center;0.00624704658774557!GO:0005099;Ras GTPase activator activity;0.00645732087625808!GO:0030127;COPII vesicle coat;0.00653098760801445!GO:0012507;ER to Golgi transport vesicle membrane;0.00653098760801445!GO:0008139;nuclear localization sequence binding;0.00662914953498845!GO:0015631;tubulin binding;0.00663708682643243!GO:0016787;hydrolase activity;0.0066640033654265!GO:0007040;lysosome organization and biogenesis;0.00674207756626895!GO:0005057;receptor signaling protein activity;0.00697289205068655!GO:0031901;early endosome membrane;0.00723545662071613!GO:0050900;leukocyte migration;0.00734924778550673!GO:0030134;ER to Golgi transport vesicle;0.00735463965666745!GO:0007160;cell-matrix adhesion;0.00761041950612153!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00762004158413805!GO:0004667;prostaglandin-D synthase activity;0.00762004158413805!GO:0050802;circadian sleep/wake cycle, sleep;0.00762004158413805!GO:0022410;circadian sleep/wake cycle process;0.00762004158413805!GO:0042749;regulation of circadian sleep/wake cycle;0.00762004158413805!GO:0045454;cell redox homeostasis;0.0076267963234628!GO:0006468;protein amino acid phosphorylation;0.00788540617758134!GO:0009117;nucleotide metabolic process;0.00789104205698343!GO:0019867;outer membrane;0.00790099655093891!GO:0022415;viral reproductive process;0.00790636848217949!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00797675857560574!GO:0045047;protein targeting to ER;0.00797675857560574!GO:0030137;COPI-coated vesicle;0.00813030283811669!GO:0006509;membrane protein ectodomain proteolysis;0.00887924921022437!GO:0033619;membrane protein proteolysis;0.00887924921022437!GO:0016859;cis-trans isomerase activity;0.00896187639076769!GO:0006414;translational elongation;0.00925044729296352!GO:0051336;regulation of hydrolase activity;0.00946122296632156!GO:0019904;protein domain specific binding;0.00954164963564858!GO:0043488;regulation of mRNA stability;0.00954164963564858!GO:0043487;regulation of RNA stability;0.00954164963564858!GO:0031968;organelle outer membrane;0.0095659294956052!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00961499564371368!GO:0030384;phosphoinositide metabolic process;0.00981245141393148!GO:0005581;collagen;0.00991132043468816!GO:0030521;androgen receptor signaling pathway;0.00997553210226973!GO:0000902;cell morphogenesis;0.00997569241041055!GO:0032989;cellular structure morphogenesis;0.00997569241041055!GO:0001666;response to hypoxia;0.0100881483645768!GO:0007005;mitochondrion organization and biogenesis;0.0100881483645768!GO:0051674;localization of cell;0.0100881483645768!GO:0006928;cell motility;0.0100881483645768!GO:0051348;negative regulation of transferase activity;0.0102203370225235!GO:0001516;prostaglandin biosynthetic process;0.0102203370225235!GO:0046457;prostanoid biosynthetic process;0.0102203370225235!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0102471852334265!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.0107903577787703!GO:0004812;aminoacyl-tRNA ligase activity;0.0107903577787703!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.0107903577787703!GO:0030658;transport vesicle membrane;0.0108927064177478!GO:0006417;regulation of translation;0.0113664345108252!GO:0004004;ATP-dependent RNA helicase activity;0.0118136737742315!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0120040548107232!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0120040548107232!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0120040548107232!GO:0022890;inorganic cation transmembrane transporter activity;0.012048856007747!GO:0030100;regulation of endocytosis;0.0122590043835302!GO:0012506;vesicle membrane;0.0125492795416706!GO:0022406;membrane docking;0.0126316346061919!GO:0048278;vesicle docking;0.0126316346061919!GO:0007167;enzyme linked receptor protein signaling pathway;0.012923373718266!GO:0008312;7S RNA binding;0.0129233995169986!GO:0007033;vacuole organization and biogenesis;0.013230389128159!GO:0006650;glycerophospholipid metabolic process;0.0134361673582801!GO:0018196;peptidyl-asparagine modification;0.0134746801363979!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0134746801363979!GO:0009108;coenzyme biosynthetic process;0.0135850683504912!GO:0043087;regulation of GTPase activity;0.0137545726033328!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0140546088775021!GO:0007050;cell cycle arrest;0.0149401377377267!GO:0031325;positive regulation of cellular metabolic process;0.0151449248794586!GO:0043038;amino acid activation;0.0151943334735043!GO:0006418;tRNA aminoacylation for protein translation;0.0151943334735043!GO:0043039;tRNA aminoacylation;0.0151943334735043!GO:0043065;positive regulation of apoptosis;0.0154344257552201!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0156162153190363!GO:0006904;vesicle docking during exocytosis;0.0156624121592733!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0160108735306519!GO:0051252;regulation of RNA metabolic process;0.0161089567360026!GO:0006752;group transfer coenzyme metabolic process;0.0163422754680248!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0165732345218359!GO:0001725;stress fiber;0.0166692813670902!GO:0032432;actin filament bundle;0.0166692813670902!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0167482201660797!GO:0005852;eukaryotic translation initiation factor 3 complex;0.016761162574234!GO:0019843;rRNA binding;0.0168590509701602!GO:0030522;intracellular receptor-mediated signaling pathway;0.016922911081017!GO:0004185;serine carboxypeptidase activity;0.0170484789108995!GO:0016311;dephosphorylation;0.0171636705089025!GO:0005862;muscle thin filament tropomyosin;0.0177064281927593!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0178834579256584!GO:0035023;regulation of Rho protein signal transduction;0.0178834579256584!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0178834579256584!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0178834579256584!GO:0035035;histone acetyltransferase binding;0.0178834579256584!GO:0060090;molecular adaptor activity;0.0180123204042118!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0185343280331466!GO:0018193;peptidyl-amino acid modification;0.0189817586774637!GO:0043068;positive regulation of programmed cell death;0.0192496287656187!GO:0051098;regulation of binding;0.0192679265935102!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0192679265935102!GO:0008234;cysteine-type peptidase activity;0.019343149652377!GO:0006643;membrane lipid metabolic process;0.0197571765469016!GO:0004672;protein kinase activity;0.0199296444348326!GO:0046822;regulation of nucleocytoplasmic transport;0.0202677242293798!GO:0007034;vacuolar transport;0.0209236510130654!GO:0046467;membrane lipid biosynthetic process;0.021055036479371!GO:0019902;phosphatase binding;0.021055036479371!GO:0048487;beta-tubulin binding;0.0217019997517177!GO:0006376;mRNA splice site selection;0.0222056805036613!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0222056805036613!GO:0006693;prostaglandin metabolic process;0.0222435656041291!GO:0006692;prostanoid metabolic process;0.0222435656041291!GO:0035258;steroid hormone receptor binding;0.0222568250504642!GO:0007229;integrin-mediated signaling pathway;0.022442470549175!GO:0051235;maintenance of localization;0.0225947926005965!GO:0008383;manganese superoxide dismutase activity;0.0233170371443564!GO:0001315;age-dependent response to reactive oxygen species;0.0233170371443564!GO:0044433;cytoplasmic vesicle part;0.0233626081702121!GO:0030659;cytoplasmic vesicle membrane;0.0233828446802754!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0235579678350556!GO:0046983;protein dimerization activity;0.023904296208406!GO:0051329;interphase of mitotic cell cycle;0.0239123342635018!GO:0005085;guanyl-nucleotide exchange factor activity;0.0240444694730165!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0241374001460779!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0244105990890932!GO:0004177;aminopeptidase activity;0.0245227181274345!GO:0051049;regulation of transport;0.0247046616731325!GO:0016584;nucleosome positioning;0.0248933212409947!GO:0051325;interphase;0.0253168080451098!GO:0030119;AP-type membrane coat adaptor complex;0.0253544395811405!GO:0005518;collagen binding;0.026605446542282!GO:0031326;regulation of cellular biosynthetic process;0.026605446542282!GO:0030660;Golgi-associated vesicle membrane;0.0267073811813581!GO:0015036;disulfide oxidoreductase activity;0.0269629901413315!GO:0008354;germ cell migration;0.0277125492175016!GO:0003702;RNA polymerase II transcription factor activity;0.0277145417206393!GO:0004722;protein serine/threonine phosphatase activity;0.0278494126950277!GO:0006364;rRNA processing;0.0291969928721856!GO:0046474;glycerophospholipid biosynthetic process;0.0300497037634457!GO:0030155;regulation of cell adhesion;0.0302179242826269!GO:0000059;protein import into nucleus, docking;0.0302179242826269!GO:0003725;double-stranded RNA binding;0.0304609272429646!GO:0031529;ruffle organization and biogenesis;0.0306705889744446!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0306705889744446!GO:0051179;localization;0.0310293792251556!GO:0030569;chymotrypsin inhibitor activity;0.0310293792251556!GO:0008147;structural constituent of bone;0.0314830629443261!GO:0006892;post-Golgi vesicle-mediated transport;0.0317183954597776!GO:0030199;collagen fibril organization;0.032598286637212!GO:0047485;protein N-terminus binding;0.0332987154392064!GO:0005869;dynactin complex;0.0335971635534486!GO:0030131;clathrin adaptor complex;0.0337880364355279!GO:0003682;chromatin binding;0.0340949453346451!GO:0051540;metal cluster binding;0.0340949453346451!GO:0051536;iron-sulfur cluster binding;0.0340949453346451!GO:0000060;protein import into nucleus, translocation;0.034127276297432!GO:0030258;lipid modification;0.0349015328379793!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0349015328379793!GO:0015399;primary active transmembrane transporter activity;0.0349015328379793!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0353054661043896!GO:0007041;lysosomal transport;0.0353236296395851!GO:0044262;cellular carbohydrate metabolic process;0.0353605447011656!GO:0000209;protein polyubiquitination;0.0353927313459055!GO:0050811;GABA receptor binding;0.0357790574962743!GO:0008287;protein serine/threonine phosphatase complex;0.0357904992085969!GO:0016072;rRNA metabolic process;0.0365998915406573!GO:0006672;ceramide metabolic process;0.0367926818257811!GO:0046489;phosphoinositide biosynthetic process;0.0368856846047892!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0368856846047892!GO:0046870;cadmium ion binding;0.0372970833943708!GO:0031349;positive regulation of defense response;0.0373584619516789!GO:0050729;positive regulation of inflammatory response;0.0373584619516789!GO:0005637;nuclear inner membrane;0.037470329313773!GO:0004563;beta-N-acetylhexosaminidase activity;0.0379932998267323!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0380960432432639!GO:0002253;activation of immune response;0.038917482251631!GO:0007030;Golgi organization and biogenesis;0.0390526285390063!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.040184485535489!GO:0006470;protein amino acid dephosphorylation;0.0409850180378886!GO:0032906;transforming growth factor-beta2 production;0.041224547364932!GO:0032909;regulation of transforming growth factor-beta2 production;0.041224547364932!GO:0005583;fibrillar collagen;0.0413650147709078!GO:0045792;negative regulation of cell size;0.0426099920532924!GO:0016853;isomerase activity;0.0434008730057772!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0437960825796717!GO:0033043;regulation of organelle organization and biogenesis;0.0437960825796717!GO:0030984;kininogen binding;0.0437960825796717!GO:0004213;cathepsin B activity;0.0437960825796717!GO:0002757;immune response-activating signal transduction;0.0448417324077089!GO:0032763;regulation of mast cell cytokine production;0.0450782455255879!GO:0032762;mast cell cytokine production;0.0450782455255879!GO:0031625;ubiquitin protein ligase binding;0.0455162012350606!GO:0051087;chaperone binding;0.0455162012350606!GO:0030135;coated vesicle;0.0460275560551716!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0464159283780505!GO:0016740;transferase activity;0.0464159283780505!GO:0004197;cysteine-type endopeptidase activity;0.0473260234766735!GO:0042578;phosphoric ester hydrolase activity;0.0479466286419348!GO:0045663;positive regulation of myoblast differentiation;0.0493835384758412
|sample_id=10041
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=dura mater
|top_motifs=NFATC1..3:2.38188447613;HBP1_HMGB_SSRP1_UBTF:2.31912989734;PRDM1:2.27523902456;GCM1,2:2.25893084772;MTF1:2.20272325754;TLX2:2.03642001632;ZNF238:1.99363551287;MYFfamily:1.96256646933;TFAP2{A,C}:1.92747983803;SOX5:1.88568203051;MYBL2:1.87330444204;EP300:1.87256459524;MTE{core}:1.85805643842;STAT2,4,6:1.79542984815;MED-1{core}:1.74834531963;MZF1:1.72684422624;MAZ:1.72066324439;GATA4:1.67514392496;RREB1:1.57309208179;HIC1:1.56562061346;GTF2I:1.45823722713;PATZ1:1.42507325884;TFCP2:1.41884793802;EGR1..3:1.38358043354;IRF7:1.38190099895;TFAP2B:1.36751669607;TLX1..3_NFIC{dimer}:1.36553608332;STAT1,3:1.35465313895;IRF1,2:1.32024008139;IKZF1:1.31426969449;NFIL3:1.26598609011;TBP:1.20091102755;SP1:1.19855095322;POU5F1:1.17519983958;FOXO1,3,4:1.16282960898;SRF:1.13526354229;HMX1:1.12960047049;EBF1:1.10872029336;TFDP1:1.09997292461;FOX{I1,J2}:1.09302089275;AR:1.08639280687;PAX5:1.06894608147;SMAD1..7,9:1.05378867361;BREu{core}:1.05193312962;FOX{D1,D2}:1.00565649013;TGIF1:1.00004222479;ZFP161:0.992270208725;ETS1,2:0.98500669187;FOXA2:0.97513813826;RBPJ:0.969226978262;XBP1:0.965520911749;ZIC1..3:0.936008766908;GFI1B:0.903356427712;TFAP4:0.903167582066;T:0.878216399882;RXRA_VDR{dimer}:0.877751005046;MEF2{A,B,C,D}:0.870988215727;TOPORS:0.86872284404;SPIB:0.818154082409;BPTF:0.748983170142;XCPE1{core}:0.67702438286;ATF2:0.659570704829;SOX{8,9,10}:0.653052968507;ZNF423:0.643789221675;DMAP1_NCOR{1,2}_SMARC:0.605501272876;HAND1,2:0.583865693478;ESR1:0.582753182426;GLI1..3:0.553806494121;SREBF1,2:0.552304170858;PAX1,9:0.548230864598;SPI1:0.545440107065;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.543840357385;ELF1,2,4:0.537635595019;ATF6:0.533761509411;TEAD1:0.523305102042;REST:0.522272196645;SPZ1:0.514944691475;GTF2A1,2:0.487522774435;NKX3-2:0.46802998085;ZNF384:0.462822948898;NHLH1,2:0.441948550759;IKZF2:0.427424535958;NR3C1:0.423332556691;KLF4:0.414061365882;NANOG:0.412687273294;RFX2..5_RFXANK_RFXAP:0.403090532059;ALX4:0.396224658222;POU2F1..3:0.393824830432;RUNX1..3:0.375360646824;CEBPA,B_DDIT3:0.367351892722;FOXP1:0.358210457852;MAFB:0.35649696868;NR1H4:0.327876263825;AHR_ARNT_ARNT2:0.327236603579;RFX1:0.322424701049;NANOG{mouse}:0.315798717936;POU6F1:0.281537646624;FOXN1:0.276632110671;ZNF148:0.260554213902;FOXP3:0.259019085128;DBP:0.256233880696;GFI1:0.251599821201;JUN:0.241704986052;SOX2:0.238797084088;GZF1:0.225853671925;HMGA1,2:0.175078314467;RORA:0.147939864467;RXR{A,B,G}:0.132484898072;ALX1:0.111952269625;ATF4:0.0951691582753;PRRX1,2:0.0941553462472;EVI1:0.0412043936842;CDC5L:0.029248441597;GATA6:0.0221981455912;ZBTB6:0.0186109850494;TAL1_TCF{3,4,12}:0.00553906512875;FOX{F1,F2,J1}:-0.00242064133618;CREB1:-0.0209544626105;TBX4,5:-0.0393131875715;ARID5B:-0.0398419895747;VSX1,2:-0.0418044179285;NKX6-1,2:-0.0647426854638;HNF1A:-0.0679249550128;HNF4A_NR2F1,2:-0.0917051524743;HES1:-0.0961850405979;PAX3,7:-0.111682011324;MYOD1:-0.125387038008;ESRRA:-0.140584561866;FOXL1:-0.146264679552;FOSL2:-0.16242546128;NFE2L2:-0.186508648528;NFKB1_REL_RELA:-0.197669641156;CRX:-0.203857591172;PAX2:-0.220340244073;CUX2:-0.225715663763;NFY{A,B,C}:-0.226189186;ADNP_IRX_SIX_ZHX:-0.233899427053;AIRE:-0.234097606729;HLF:-0.237264923539;OCT4_SOX2{dimer}:-0.237313564485;PDX1:-0.242317465221;NKX2-1,4:-0.250483688922;NFE2:-0.2565795346;HIF1A:-0.259288800748;SOX17:-0.272317113169;EN1,2:-0.326223330007;E2F1..5:-0.396357935189;NKX2-3_NKX2-5:-0.42571723225;FOS_FOS{B,L1}_JUN{B,D}:-0.44374599818;PITX1..3:-0.462435485653;SNAI1..3:-0.519078604212;LEF1_TCF7_TCF7L1,2:-0.543728950206;ATF5_CREB3:-0.546533265496;BACH2:-0.556486863097;HOX{A4,D4}:-0.588425855558;bHLH_family:-0.594510358565;LMO2:-0.596927724261;NFIX:-0.604928456514;NFE2L1:-0.632925300177;UFEwm:-0.701028131946;NR6A1:-0.711590189275;ZNF143:-0.71298297248;POU3F1..4:-0.716082844182;TEF:-0.720915691184;HSF1,2:-0.728382677173;NRF1:-0.775760154633;NR5A1,2:-0.779048422289;TP53:-0.785056129828;ZEB1:-0.807590351951;PBX1:-0.82249338144;FOXM1:-0.832677760139;HOX{A5,B5}:-0.842967403548;NKX2-2,8:-0.862424218005;ZBTB16:-0.890344263268;FOXD3:-0.940554233496;HOX{A6,A7,B6,B7}:-0.95932371243;POU1F1:-0.961766062301;CDX1,2,4:-0.993442398379;MYB:-1.0029575786;PAX4:-1.00795709681;YY1:-1.11127265964;NKX3-1:-1.13519940617;PAX8:-1.16534565687;PPARG:-1.2800734735;LHX3,4:-1.33004554049;PAX6:-1.35388547496;ELK1,4_GABP{A,B1}:-1.36284984225;FOXQ1:-1.37364142953;ONECUT1,2:-1.48839982082;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.69802226449;STAT5{A,B}:-2.02372922527;HOXA9_MEIS1:-2.43930615992
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10041-101F5;search_select_hide=table117:FF:10041-101F5
}}
}}

Latest revision as of 12:16, 3 June 2020

Name:dura mater, adult, donor1
Species:Human (Homo sapiens)
Library ID:CNhs10648
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuedura mater
dev stage59 years old adult
sexfemale
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyClontech
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number3040808
catalog numberCat:636588
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005192
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10648 CAGE DRX008647 DRR009519
Accession ID Hg19

Library idBAMCTSS
CNhs10648 DRZ000944 DRZ002329
Accession ID Hg38

Library idBAMCTSS
CNhs10648 DRZ012294 DRZ013679
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.0266
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.085
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.0266
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.0272
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.0266
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.0517
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0517
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.0266
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.0266
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.367
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.119
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.1
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0574
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.0151
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.29
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.194
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.243
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.0266
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.134
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.378
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0517
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0266
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.0883
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.0266
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.101
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.0266
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.573
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.0266
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.14
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0.0979
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.0266
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.112
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.0979
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.446
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.0266
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.178
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.442
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.0517
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.0266
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.207
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0457
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.0517
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0511
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.0517
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.0266
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0979
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0.0254
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.109
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.128
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.33
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.119
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0754
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.213
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.498
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.0517
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.0754
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.54
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.119
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.0498
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.26
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.0517
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.0266
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.0266
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0.0266
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0.0517
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.229
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.117
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.0266
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.237
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.0266
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.0266
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.0979
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.0266
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.0266
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.0266
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10648

Jaspar motifP-value
MA0002.20.118
MA0003.10.864
MA0004.10.22
MA0006.10.747
MA0007.10.31
MA0009.10.202
MA0014.10.107
MA0017.10.193
MA0018.20.783
MA0019.10.347
MA0024.10.56
MA0025.10.18
MA0027.10.945
MA0028.14.16716e-4
MA0029.10.736
MA0030.10.102
MA0031.10.414
MA0035.20.14
MA0038.10.0807
MA0039.20.353
MA0040.10.695
MA0041.10.717
MA0042.10.489
MA0043.10.598
MA0046.10.863
MA0047.20.465
MA0048.10.195
MA0050.12.40134e-8
MA0051.10.00622
MA0052.17.88043e-4
MA0055.11.96231e-4
MA0057.10.858
MA0058.10.106
MA0059.10.00259
MA0060.10.419
MA0061.10.0517
MA0062.26.57212e-4
MA0065.20.00267
MA0066.10.00671
MA0067.10.396
MA0068.16.0929e-4
MA0069.10.864
MA0070.10.0988
MA0071.10.0472
MA0072.10.11
MA0073.10.666
MA0074.10.168
MA0076.10.00254
MA0077.10.567
MA0078.10.123
MA0079.20.337
MA0080.29.00629e-6
MA0081.10.381
MA0083.10.151
MA0084.10.99
MA0087.10.186
MA0088.10.00588
MA0090.10.664
MA0091.10.601
MA0092.10.801
MA0093.10.2
MA0099.22.78391e-9
MA0100.10.395
MA0101.10.292
MA0102.20.0184
MA0103.10.00691
MA0104.20.0105
MA0105.12.29009e-5
MA0106.10.00424
MA0107.10.505
MA0108.21.34009e-10
MA0111.10.529
MA0112.20.00688
MA0113.10.518
MA0114.10.0257
MA0115.10.0172
MA0116.10.00659
MA0117.10.609
MA0119.10.157
MA0122.10.795
MA0124.10.529
MA0125.10.467
MA0131.10.754
MA0135.10.0667
MA0136.10.0297
MA0137.23.66188e-4
MA0138.20.75
MA0139.10.0214
MA0140.10.364
MA0141.10.00542
MA0142.10.239
MA0143.10.876
MA0144.10.189
MA0145.10.994
MA0146.10.0666
MA0147.10.00452
MA0148.10.959
MA0149.10.0154
MA0150.10.007
MA0152.10.0336
MA0153.10.832
MA0154.10.0456
MA0155.10.853
MA0156.10.849
MA0157.10.719
MA0159.10.0306
MA0160.10.018
MA0162.10.181
MA0163.11.82324e-7
MA0164.10.292
MA0258.10.0176
MA0259.10.11



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10648

Novel motifP-value
10.00557
100.0361
1000.0746
1010.461
1020.123
1030.0531
1040.844
1050.946
1060.829
1070.31
1080.443
1090.0165
110.051
1100.0806
1110.0226
1120.465
1130.0313
1140.0756
1150.589
1160.328
1170.00396
1180.0182
1190.271
120.72
1200.0245
1210.828
1220.674
1230.134
1240.398
1250.0763
1260.381
1270.645
1280.732
1290.0145
130.0299
1300.393
1310.279
1320.56
1332.27882e-4
1340.0842
1350.0413
1360.0939
1370.461
1380.993
1390.148
140.927
1400.0843
1410.238
1420.52
1430.0256
1440.77
1450.509
1460.821
1470.811
1480.26
1490.821
150.0335
1500.369
1510.581
1520.862
1530.963
1540.968
1550.344
1560.539
1570.858
1580.996
1590.402
160.0288
1600.174
1610.27
1620.965
1630.377
1640.012
1650.442
1660.505
1670.0127
1680.681
1690.0749
170.592
180.0831
190.926
20.496
200.0989
210.314
220.704
230.708
240.353
250.344
260.00853
270.99
280.59
290.00509
30.179
300.205
310.729
320.195
330.181
340.322
350.207
360.0561
370.0496
380.497
390.868
40.33
400.0741
410.209
420.353
430.167
440.104
450.614
460.101
470.0291
480.132
490.0853
50.393
500.655
510.618
520.324
530.723
540.7
550.837
560.57
570.0354
580.425
590.539
60.831
600.995
610.349
620.306
630.311
640.117
650.603
660.184
670.254
680.834
690.406
70.308
700.00665
710.0157
720.962
730.175
740.783
750.00693
760.112
770.86
780.0145
790.0986
80.138
800.0653
810.753
820.197
830.851
840.955
850.9
860.403
870.0123
880.761
890.304
90.446
900.0455
910.612
920.951
930.194
940.0643
950.0339
960.832
970.707
980.217
990.71



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10648


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0002363 (dura mater)
0002360 (meninx)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000094 (membrane organ)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0010743 (meningeal cluster)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010041 (human dura mater - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0010115 (future dura mater)
UBERON:0010316 (germ layer / neural crest)

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