FF:10182-103D2: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00004969 | |||
|accession_numbers=CAGE;DRX008676;DRR009548;DRZ000973;DRZ002358;DRZ012323;DRZ013708 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0000988,UBERON:0002148,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002680,UBERON:0002616,UBERON:0004733,UBERON:0004732,UBERON:0006331,UBERON:0009662,UBERON:0000125,UBERON:0002020,UBERON:0010317,UBERON:0002308,UBERON:0001017,UBERON:0001016,UBERON:0001895,UBERON:0002298,UBERON:0002028 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0000988,UBERON:0002148,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002680,UBERON:0002616,UBERON:0004733,UBERON:0004732,UBERON:0006331,UBERON:0009662,UBERON:0000125,UBERON:0002020,UBERON:0010317,UBERON:0002308,UBERON:0001017,UBERON:0001016,UBERON:0001895,UBERON:0002298,UBERON:0002028 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.84!696.96!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.63!423.14!OLIG1;;chr11:61520075..61520136,+!p1@C11orf9!2.13!271.24!C11orf9;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.12!129.41!PEG3;;chr22:38380543..38380569,-!p1@SOX10!2.05!112.48!SOX10;;chr10:48355030..48355090,+!p1@ZNF488!2.02!130.71!ZNF488;;chr8:53322304..53322340,-!p1@ST18!1.97!91.92!ST18;;chr21:34442540..34442560,+!p2@OLIG1!1.97!91.53!OLIG1;;chr12:106976774..106976788,+!p1@RFX4!1.92!82.09!RFX4;;chr2:145277882..145277967,-!p3@ZEB2!1.88!126.05!ZEB2;;chr3:181429704..181429722,+!p1@SOX2!1.77!57.53!SOX2;;chr9:77112244..77112262,+!p1@RORB!1.76!62.31!RORB;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.71!50.16!POU3F3;;chr9:114287433..114287513,+!p1@ZNF483!1.69!120.62!ZNF483;;chr10:134599649..134599653,-!p1@NKX6-2!1.68!46.41!NKX6-2;;chr16:1031762..1031781,+!p1@SOX8!1.67!45.64!SOX8;;chr8:53322347..53322378,-!p2@ST18!1.67!45.64!ST18;;chr21:34398234..34398250,+!p1@OLIG2!1.67!45.38!OLIG2;;chr12:106976678..106976708,+!p2@RFX4!1.65!43.44!RFX4;;chr12:26277956..26277980,-!p1@BHLHE41!1.54!116.23!BHLHE41;;chr12:103351444..103351461,+!p1@ASCL1!1.54!34.00!ASCL1;;chr11:8102846..8102892,+!p1@TUB!1.51!42.92!TUB;;chr12:26277817..26277863,-!p2@BHLHE41!1.48!39.17!BHLHE41;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.48!28.96!SMARCE1;;chr15:80696703..80696754,+!p1@ARNT2!1.47!37.49!ARNT2;;chr1:214161272..214161322,+!p1@PROX1!1.46!38.91!PROX1;;chr19:46801639..46801699,+!p1@HIF3A!1.45!27.28!HIF3A;;chr3:181429741..181429767,+!p2@SOX2!1.45!27.28!SOX2;;chr11:113930425..113930471,+!p1@ZBTB16!1.44!37.75!ZBTB16;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.44!26.76!ZBED1;;chr7:63505799..63505904,+!p1@ZNF727!1.44!26.24!ZNF727;;chr14:33408072..33408114,+!p2@NPAS3!1.42!29.61!NPAS3;;chr20:62680984..62680999,-!p1@SOX18!1.41!32.84!SOX18;;chr14:33403881..33403924,+!p1@NPAS3!1.38!22.88!NPAS3;;chr1:61548069..61548102,+!p3@NFIA!1.36!51.84!NFIA;;chr12:54779511..54779577,-!p5@ZNF385A!1.36!21.98!ZNF385A;;chr4:81118647..81118666,+!p1@PRDM8!1.33!26.63!PRDM8;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.33!20.56!POU3F3;;chr6:126112039..126112062,+!p8@NCOA7!1.30!22.62!NCOA7;;chr19:57352109..57352153,-!p2@ZIM2!1.30!18.75!ZIM2;;chr4:57547454..57547469,-!p1@HOPX!1.29!18.36!HOPX;;chr19:30863271..30863338,+!p1@ZNF536!1.28!18.23!ZNF536;;chr12:54785074..54785122,-!p2@ZNF385A!1.26!26.50!ZNF385A;;chr11:31832658..31832681,-!p1@PAX6!1.24!16.29!PAX6;;chr14:33403648..33403710,+!p3@NPAS3!1.24!16.29!NPAS3;;chr14:73360799..73360817,-!p1@DPF3!1.22!53.14!DPF3;;chr19:13135386..13135435,+!p4@NFIX!1.22!15.77!NFIX;;chr21:34442584..34442587,+!p3@OLIG1!1.22!15.77!OLIG1;;chr4:41750731..41750748,-!p1@PHOX2B!1.22!15.64!PHOX2B;;chr2:95963052..95963106,+!p1@KCNIP3!1.21!15.13!KCNIP3;;chr3:126076242..126076257,-!p1@KLF15!1.19!17.84!KLF15;;chr2:145275982..145276003,-!p7@ZEB2!1.18!13.96!ZEB2;;chr13:72441315..72441454,-!p1@DACH1!1.16!27.02!DACH1;;chr20:50179368..50179392,-!p2@NFATC2!1.16!17.32!NFATC2;;chr17:53342311..53342400,+!p1@HLF!1.16!15.26!HLF;;chr19:22193731..22193751,-!p1@ZNF208!1.16!13.45!ZNF208;;chr12:103352277..103352324,+!p2@ASCL1!1.16!13.45!ASCL1;;chr19:46800289..46800327,+!p2@HIF3A!1.16!13.45!HIF3A;;chr19:58545454..58545498,+!p1@ZSCAN1!1.16!13.45!ZSCAN1;;chr7:28725740..28725778,+!p1@CREB5!1.15!116.48!CREB5;;chr20:21494654..21494678,-!p2@NKX2-2!1.15!13.06!NKX2-2;;chr6:126070769..126070801,+!p1@HEY2!1.14!14.61!HEY2;;chr1:40105299..40105326,-!p1@HEYL!1.14!12.67!HEYL;;chr3:187463179..187463201,-!p2@BCL6!1.13!51.97!BCL6;;chr17:7492684..7492778,-!p2@SOX15!1.13!26.63!SOX15;;chr8:40755333..40755352,-!p1@ZMAT4!1.13!12.41!ZMAT4;;chr3:147127177..147127194,+!p2@ZIC1!1.12!12.28!ZIC1;;chr5:2751762..2751784,-!p1@IRX2!1.11!11.89!IRX2;;chr15:80733570..80733659,+!p2@ARNT2!1.11!11.89!ARNT2;;chr10:111987079..111987115,+!p3@MXI1!1.10!16.03!MXI1;;chr11:113930401..113930422,+!p3@ZBTB16!1.10!11.64!ZBTB16;;chr11:47400078..47400106,-!p1@SPI1!1.10!11.51!SPI1;;chr6:19837592..19837621,+!p1@ID4!1.09!69.17!ID4;;chr12:26277929..26277955,-!p3@BHLHE41!1.09!16.03!BHLHE41;;chr10:48359344..48359376,+!p2@ZNF488!1.09!11.25!ZNF488;;chr16:51185318..51185348,-!p2@SALL1!1.09!11.25!SALL1;;chr1:61548225..61548299,+!p1@NFIA!1.08!145.06!NFIA;;chr10:64134120..64134183,+!p1@ZNF365!1.08!13.45!ZNF365;;chr8:80679993..80680011,-!p1@HEY1!1.07!15.77!HEY1;;chr11:125034640..125034655,+!p1@PKNOX2!1.06!10.60!PKNOX2;;chr3:147127142..147127168,+!p1@ZIC1!1.06!10.47!ZIC1;;chr16:51185172..51185197,-!p1@SALL1!1.06!10.47!SALL1;;chr14:21994337..21994442,-!p1@SALL2!1.05!28.31!SALL2;;chr2:166326200..166326216,+!p1@CSRNP3!1.05!15.00!CSRNP3;;chr4:26344778..26344807,+!p8@RBPJ!1.05!10.34!RBPJ;;chr14:21994449..21994524,-!p2@SALL2!1.04!30.51!SALL2;;chr4:57547751..57547764,-!p6@HOPX!1.04!10.08!HOPX;;chr8:80680024..80680046,-!p2@HEY1!1.03!10.99!HEY1;;chr2:95963120..95963136,+!p2@KCNIP3!1.03!9.83!KCNIP3;;chr19:13135582..13135600,+!p3@NFIX!1.03!9.83!NFIX;;chr21:39870339..39870443,-!p1@ERG!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| |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.84!696.96!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.63!423.14!OLIG1;;chr11:61520075..61520136,+!p1@C11orf9!2.13!271.24!C11orf9;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.12!129.41!PEG3;;chr22:38380543..38380569,-!p1@SOX10!2.05!112.48!SOX10;;chr10:48355030..48355090,+!p1@ZNF488!2.02!130.71!ZNF488;;chr8:53322304..53322340,-!p1@ST18!1.97!91.92!ST18;;chr21:34442540..34442560,+!p2@OLIG1!1.97!91.53!OLIG1;;chr12:106976774..106976788,+!p1@RFX4!1.92!82.09!RFX4;;chr2:145277882..145277967,-!p3@ZEB2!1.88!126.05!ZEB2;;chr3:181429704..181429722,+!p1@SOX2!1.77!57.53!SOX2;;chr9:77112244..77112262,+!p1@RORB!1.76!62.31!RORB;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.71!50.16!POU3F3;;chr9:114287433..114287513,+!p1@ZNF483!1.69!120.62!ZNF483;;chr10:134599649..134599653,-!p1@NKX6-2!1.68!46.41!NKX6-2;;chr16:1031762..1031781,+!p1@SOX8!1.67!45.64!SOX8;;chr8:53322347..53322378,-!p2@ST18!1.67!45.64!ST18;;chr21:34398234..34398250,+!p1@OLIG2!1.67!45.38!OLIG2;;chr12:106976678..106976708,+!p2@RFX4!1.65!43.44!RFX4;;chr12:26277956..26277980,-!p1@BHLHE41!1.54!116.23!BHLHE41;;chr12:103351444..103351461,+!p1@ASCL1!1.54!34.00!ASCL1;;chr11:8102846..8102892,+!p1@TUB!1.51!42.92!TUB;;chr12:26277817..26277863,-!p2@BHLHE41!1.48!39.17!BHLHE41;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.48!28.96!SMARCE1;;chr15:80696703..80696754,+!p1@ARNT2!1.47!37.49!ARNT2;;chr1:214161272..214161322,+!p1@PROX1!1.46!38.91!PROX1;;chr19:46801639..46801699,+!p1@HIF3A!1.45!27.28!HIF3A;;chr3:181429741..181429767,+!p2@SOX2!1.45!27.28!SOX2;;chr11:113930425..113930471,+!p1@ZBTB16!1.44!37.75!ZBTB16;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.44!26.76!ZBED1;;chr7:63505799..63505904,+!p1@ZNF727!1.44!26.24!ZNF727;;chr14:33408072..33408114,+!p2@NPAS3!1.42!29.61!NPAS3;;chr20:62680984..62680999,-!p1@SOX18!1.41!32.84!SOX18;;chr14:33403881..33403924,+!p1@NPAS3!1.38!22.88!NPAS3;;chr1:61548069..61548102,+!p3@NFIA!1.36!51.84!NFIA;;chr12:54779511..54779577,-!p5@ZNF385A!1.36!21.98!ZNF385A;;chr4:81118647..81118666,+!p1@PRDM8!1.33!26.63!PRDM8;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.33!20.56!POU3F3;;chr6:126112039..126112062,+!p8@NCOA7!1.30!22.62!NCOA7;;chr19:57352109..57352153,-!p2@ZIM2!1.30!18.75!ZIM2;;chr4:57547454..57547469,-!p1@HOPX!1.29!18.36!HOPX;;chr19:30863271..30863338,+!p1@ZNF536!1.28!18.23!ZNF536;;chr12:54785074..54785122,-!p2@ZNF385A!1.26!26.50!ZNF385A;;chr11:31832658..31832681,-!p1@PAX6!1.24!16.29!PAX6;;chr14:33403648..33403710,+!p3@NPAS3!1.24!16.29!NPAS3;;chr14:73360799..73360817,-!p1@DPF3!1.22!53.14!DPF3;;chr19:13135386..13135435,+!p4@NFIX!1.22!15.77!NFIX;;chr21:34442584..34442587,+!p3@OLIG1!1.22!15.77!OLIG1;;chr4:41750731..41750748,-!p1@PHOX2B!1.22!15.64!PHOX2B;;chr2:95963052..95963106,+!p1@KCNIP3!1.21!15.13!KCNIP3;;chr3:126076242..126076257,-!p1@KLF15!1.19!17.84!KLF15;;chr2:145275982..145276003,-!p7@ZEB2!1.18!13.96!ZEB2;;chr13:72441315..72441454,-!p1@DACH1!1.16!27.02!DACH1;;chr20:50179368..50179392,-!p2@NFATC2!1.16!17.32!NFATC2;;chr17:53342311..53342400,+!p1@HLF!1.16!15.26!HLF;;chr19:22193731..22193751,-!p1@ZNF208!1.16!13.45!ZNF208;;chr12:103352277..103352324,+!p2@ASCL1!1.16!13.45!ASCL1;;chr19:46800289..46800327,+!p2@HIF3A!1.16!13.45!HIF3A;;chr19:58545454..58545498,+!p1@ZSCAN1!1.16!13.45!ZSCAN1;;chr7:28725740..28725778,+!p1@CREB5!1.15!116.48!CREB5;;chr20:21494654..21494678,-!p2@NKX2-2!1.15!13.06!NKX2-2;;chr6:126070769..126070801,+!p1@HEY2!1.14!14.61!HEY2;;chr1:40105299..40105326,-!p1@HEYL!1.14!12.67!HEYL;;chr3:187463179..187463201,-!p2@BCL6!1.13!51.97!BCL6;;chr17:7492684..7492778,-!p2@SOX15!1.13!26.63!SOX15;;chr8:40755333..40755352,-!p1@ZMAT4!1.13!12.41!ZMAT4;;chr3:147127177..147127194,+!p2@ZIC1!1.12!12.28!ZIC1;;chr5:2751762..2751784,-!p1@IRX2!1.11!11.89!IRX2;;chr15:80733570..80733659,+!p2@ARNT2!1.11!11.89!ARNT2;;chr10:111987079..111987115,+!p3@MXI1!1.10!16.03!MXI1;;chr11:113930401..113930422,+!p3@ZBTB16!1.10!11.64!ZBTB16;;chr11:47400078..47400106,-!p1@SPI1!1.10!11.51!SPI1;;chr6:19837592..19837621,+!p1@ID4!1.09!69.17!ID4;;chr12:26277929..26277955,-!p3@BHLHE41!1.09!16.03!BHLHE41;;chr10:48359344..48359376,+!p2@ZNF488!1.09!11.25!ZNF488;;chr16:51185318..51185348,-!p2@SALL1!1.09!11.25!SALL1;;chr1:61548225..61548299,+!p1@NFIA!1.08!145.06!NFIA;;chr10:64134120..64134183,+!p1@ZNF365!1.08!13.45!ZNF365;;chr8:80679993..80680011,-!p1@HEY1!1.07!15.77!HEY1;;chr11:125034640..125034655,+!p1@PKNOX2!1.06!10.60!PKNOX2;;chr3:147127142..147127168,+!p1@ZIC1!1.06!10.47!ZIC1;;chr16:51185172..51185197,-!p1@SALL1!1.06!10.47!SALL1;;chr14:21994337..21994442,-!p1@SALL2!1.05!28.31!SALL2;;chr2:166326200..166326216,+!p1@CSRNP3!1.05!15.00!CSRNP3;;chr4:26344778..26344807,+!p8@RBPJ!1.05!10.34!RBPJ;;chr14:21994449..21994524,-!p2@SALL2!1.04!30.51!SALL2;;chr4:57547751..57547764,-!p6@HOPX!1.04!10.08!HOPX;;chr8:80680024..80680046,-!p2@HEY1!1.03!10.99!HEY1;;chr2:95963120..95963136,+!p2@KCNIP3!1.03!9.83!KCNIP3;;chr19:13135582..13135600,+!p3@NFIX!1.03!9.83!NFIX;;chr21:39870339..39870443,-!p1@ERG!1.03!9.83!ERG;;chr22:41763452..41763466,+!p2@TEF!1.03!9.70!TEF;;chr6:126112074..126112144,+!p1@NCOA7!1.02!129.15!NCOA7;;chr17:70117153..70117174,+!p1@SOX9!1.02!99.42!SOX9;;chr8:145560371..145560449,-!p1@SCRT1!1.02!9.57!SCRT1;;chr2:145277640..145277771,-!p1@ZEB2!1.01!125.66!ZEB2;;chr19:21512202..21512225,-!p1@ZNF708!1.01!47.83!ZNF708;;chr19:9879350..9879419,-!p2@ZNF846!1.01!19.78!ZNF846;;chr8:145560111..145560165,-!p2@SCRT1!1.01!9.31!SCRT1;;chr10:119302232..119302265,+!p1@EMX2!1.01!9.31!EMX2;;chr12:106976656..106976672,+!p4@RFX4!1.01!9.31!RFX4;;chr19:38085768..38085821,+!p1@ZNF540!1.00!13.57!ZNF540;;chr7:6655225..6655279,+!p1@ENST00000457543!1.00!13.57!ZNF853;;chr5:71803177..71803255,-!p1@ZNF366!1.00!9.05!ZNF366;;chr1:61547894..61547968,+!p2@NFIA!0.99!25.99!NFIA;;chr20:51588873..51588953,+!p1@TSHZ2!0.99!11.64!TSHZ2;;chr17:38219209..38219230,+!p1@THRA!0.98!114.03!THRA;;chr1:151032860..151032918,+!p1@MLLT11!0.98!103.04!MLLT11;;chr12:54785054..54785072,-!p4@ZNF385A!0.98!9.70!ZNF385A;;chr1:217263131..217263207,-!p4@ESRRG!0.98!8.53!ESRRG;;chr16:67198633..67198671,+!p1@HSF4!0.98!8.53!HSF4;;chr2:2334997..2335053,-!p1@MYT1L!0.98!8.53!MYT1L;;chrX:106959661..106959763,-!p4@TSC22D3!0.97!25.34!TSC22D3;;chr3:114343768..114343822,-!p1@ZBTB20!0.96!36.33!ZBTB20;;chr3:52001396..52001425,-!p4@PCBP4!0.96!14.61!PCBP4;;chrX:84498989..84499003,+!p1@ZNF711!0.96!11.12!ZNF711;;chr11:8102819..8102845,+!p3@TUB!0.96!10.21!TUB;;chr2:239148671..239148686,-!p1@HES6!0.95!29.99!HES6;;chrX:70315688..70315709,+!p1@FOXO4!0.95!19.00!FOXO4;;chr2:16080659..16080685,+!p1@MYCN!0.95!8.02!MYCN;;chr2:177053386..177053402,+!p1@HOXD1!0.95!7.89!HOXD1;;chr20:21494684..21494708,-!p1@NKX2-2!0.95!7.89!NKX2-2;;chr12:54772960..54773015,-!p3@ZNF385A!0.94!38.66!ZNF385A;;chr19:21512144..21512191,-!p2@ZNF708!0.94!36.97!ZNF708;;chr3:114819124..114819200,-!p3@ZBTB20!0.94!18.49!ZBTB20;;chr1:151032922..151032951,+!p2@MLLT11!0.94!13.19!MLLT11;;chr3:126076264..126076305,-!p2@KLF15!0.94!10.99!KLF15;;chr3:114173720..114173794,-!p6@ZBTB20!0.94!7.76!ZBTB20;;chr10:64134045..64134083,+!p3@ZNF365!0.94!7.76!ZNF365;;chr9:14314131..14314147,-!p2@NFIB!0.93!43.31!NFIB;;chr11:113930291..113930339,+!p2@ZBTB16!0.93!12.67!ZBTB16;;chr1:23696348..23696363,-!p4@ZNF436!0.93!8.53!ZNF436;;chr3:141105705..141105770,+!p4@ZBTB38!0.92!8.92!ZBTB38;;chr4:57522598..57522664,-!p3@HOPX!0.92!7.37!HOPX;;chr14:33408493..33408525,+!p4@NPAS3!0.92!7.24!NPAS3;;chr19:53636125..53636178,-!p1@ZNF415!0.91!20.94!ZNF415;;chr15:57511609..57511651,+!p2@TCF12!0.91!12.28!TCF12;;chr7:64023410..64023428,-!p2@ZNF680!0.91!11.51!ZNF680;;chr7:50344289..50344323,+!p1@IKZF1!0.91!7.11!IKZF1;;chr13:72441074..72441172,-!p2@DACH1!0.91!7.11!DACH1;;chr7:86781858..86781879,+!p3@DMTF1!0.90!11.64!DMTF1;;chr20:50159198..50159299,-!p1@NFATC2!0.90!10.47!NFATC2;;chr4:57522166..57522260,-!p2@HOPX!0.90!8.02!HOPX;;chr2:145275947..145275981,-!p10@ZEB2!0.90!6.98!ZEB2;;chr17:37764128..37764258,-!p1@NEUROD2!0.90!6.98!NEUROD2;;chr11:31832862..31832884,-!p2@PAX6!0.90!6.98!PAX6;;chr12:54778471..54778528,-!p1@ZNF385A!0.90!6.98!ZNF385A;;chr7:28448965..28448994,+!p2@CREB5!0.89!24.95!CREB5;;chr19:21512115..21512135,-!p3@ZNF708!0.89!14.35!ZNF708;;chr13:45151509..45151539,-!p6@TSC22D1!0.89!11.76!TSC22D1;;chr1:61924375..61924380,+!p6@NFIA!0.89!9.70!NFIA;;chr5:92919100..92919135,+!p3@NR2F1!0.89!8.40!NR2F1;;chr1:61548118..61548129,+!p9@NFIA!0.89!7.63!NFIA;;chr5:124084493..124084524,-!p2@ZNF608!0.88!15.13!ZNF608;;chr9:14314946..14314983,-!p8@NFIB!0.88!6.59!NFIB;;chr18:76739816..76739822,+!p1@SALL3!0.88!6.59!SALL3;;chr15:60884706..60884743,-!p1@RORA!0.87!35.16!RORA;;chr10:35484053..35484076,+!p1@CREM!0.87!16.81!CREM;;chrX:118739835..118739862,-!p1@NKRF!0.87!7.11!NKRF;;chr15:80696666..80696700,+!p4@ARNT2!0.87!6.46!ARNT2;;chr2:60781201..60781258,-!p3@BCL11A!0.87!6.46!BCL11A;;chr6:15401104..15401166,+!p5@JARID2!0.87!6.33!JARID2;;chr5:124082322..124082364,-!p1@ZNF608!0.86!16.55!ZNF608;;chr13:46549911..46549956,-!p3@ZC3H13!0.86!9.05!ZC3H13;;chr19:57183114..57183145,-!p1@ZNF835!0.86!7.11!ZNF835;;chr11:31839488..31839515,-!p3@PAX6!0.86!6.21!PAX6;;chr14:22005197..22005261,-!p3@SALL2!0.86!6.21!SALL2;;chr10:38265517..38265591,-!p1@ZNF25!0.85!25.08!ZNF25;;chr1:244219775..244219893,+!p2@ZNF238!0.85!8.53!ZNF238;;chr20:42544782..42544828,+!p4@TOX2!0.85!6.08!TOX2;;chr4:26344754..26344772,+!p10@RBPJ!0.85!6.08!RBPJ;;chr15:80696836..80696853,+!p7@ARNT2!0.85!6.08!ARNT2;;chr18:45935720..45935772,-!p1@ZBTB7C!0.85!6.08!ZBTB7C;;chr11:31832687..31832704,-!p6@PAX6!0.85!6.08!PAX6;;chr8:30890810..30890880,-!p1@PURG!0.85!6.08!PURG;;chr21:47063625..47063658,+!p1@PCBP3!0.84!27.54!PCBP3;;chr20:3388541..3388575,-!p2@C20orf194!0.84!24.43!C20orf194;;chr6:91006518..91006570,-!p1@BACH2!0.84!14.22!BACH2;;chr11:85393886..85393913,-!p3@CREBZF!0.84!5.95!CREBZF;;chr16:85932760..85932775,+!p1@IRF8!0.84!5.95!IRF8;;chr17:47439437..47439533,-!p1@ZNF652!0.83!49.77!ZNF652;;chr17:38219143..38219154,+!p2@THRA!0.83!21.72!THRA;;chr2:214016314..214016343,-!p2@IKZF2!0.83!9.95!IKZF2;;chr1:170633348..170633399,+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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001895;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002028;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002148;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002298;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002308;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316 | |ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 38: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/locus%2520coeruleus%2520-%2520adult%252c%2520donor10196.CNhs13808.10182-103D2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/locus%2520coeruleus%2520-%2520adult%252c%2520donor10196.CNhs13808.10182-103D2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/locus%2520coeruleus%2520-%2520adult%252c%2520donor10196.CNhs13808.10182-103D2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/locus%2520coeruleus%2520-%2520adult%252c%2520donor10196.CNhs13808.10182-103D2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/locus%2520coeruleus%2520-%2520adult%252c%2520donor10196.CNhs13808.10182-103D2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10182-103D2 | |id=FF:10182-103D2 | ||
|is_a=FF:0011487 | |is_a=FF:0011487 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs13808 | |||
|library_id_phase_based=2:CNhs13808 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10182 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10182 | |||
|name=locus coeruleus - adult, donor10196 | |name=locus coeruleus - adult, donor10196 | ||
|namespace= | |namespace= | ||
Line 48: | Line 63: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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Line 85: | Line 101: | ||
|top_motifs=REST:3.4612153696;SOX2:3.26847257765;MYFfamily:3.25720988543;NHLH1,2:3.1926523195;MTF1:3.17597833668;SOX5:3.11723342931;RREB1:3.07495197278;ZFP161:2.97161365241;HIC1:2.82044729224;DBP:2.73683031051;MED-1{core}:2.63268911072;NFIX:2.61926454577;PRDM1:2.61461677855;PRRX1,2:2.55195947251;MTE{core}:2.54256120786;ATF2:2.49698064446;RFX1:2.48625688943;SOX{8,9,10}:2.47400080459;RFX2..5_RFXANK_RFXAP:2.41887829559;ZBTB6:2.409318411;TFAP2B:2.37338760627;CUX2:2.37268629176;NANOG:2.29772577751;LMO2:2.24834892161;GFI1B:2.22705347954;OCT4_SOX2{dimer}:2.22424281469;EGR1..3:2.202735277;GATA4:2.19212214499;NKX3-2:2.18006628059;GTF2I:2.17794203561;KLF4:2.16808997816;PAX6:2.15119172651;SMAD1..7,9:2.14486352473;HOXA9_MEIS1:2.13430002242;FOXP3:2.11279044092;TGIF1:2.05958290483;HOX{A6,A7,B6,B7}:2.05454003262;PATZ1:2.05242099696;SOX17:1.99883892868;JUN:1.99090069329;HBP1_HMGB_SSRP1_UBTF:1.92926540026;MZF1:1.91456556428;MAZ:1.76236469253;EP300:1.75830779643;BREu{core}:1.73542754936;FOXD3:1.69792833156;SP1:1.69294373999;ZNF384:1.63683783841;PAX5:1.63298467978;GCM1,2:1.61007581336;NKX6-1,2:1.60414865484;AHR_ARNT_ARNT2:1.5899397087;EBF1:1.56392946264;XBP1:1.54243101565;PDX1:1.51199414622;STAT2,4,6:1.50946317993;POU6F1:1.47505309352;FOXM1:1.47251600387;ZNF423:1.45915454318;TFDP1:1.41282739735;LEF1_TCF7_TCF7L1,2:1.3953982831;BPTF:1.35868645554;MYBL2:1.32370666205;FOXP1:1.28525526481;RBPJ:1.23371814522;POU5F1:1.23295099008;NR3C1:1.19865923251;STAT1,3:1.17381931286;NRF1:1.1734158979;RORA:1.16502925818;POU3F1..4:1.15345431815;IKZF2:1.1448834086;ZIC1..3:1.13654104034;TFAP2{A,C}:1.13142209846;CDC5L:1.10772719417;ARID5B:1.06533030224;TLX1..3_NFIC{dimer}:1.02253655765;VSX1,2:1.01491920051;FOXQ1:0.996437319196;NKX2-3_NKX2-5:0.970222462504;HOX{A4,D4}:0.909130809355;ONECUT1,2:0.847569930825;FOX{D1,D2}:0.83548915154;AR:0.764225752728;SREBF1,2:0.761159280039;CRX:0.73850932352;MAFB:0.707446416353;ZNF143:0.689192998852;LHX3,4:0.663356160293;ADNP_IRX_SIX_ZHX:0.64009222103;ZBTB16:0.628451345664;HMGA1,2:0.61175983417;PAX4:0.504485105883;CREB1:0.471432125052;GTF2A1,2:0.443717262151;FOXO1,3,4:0.440905925087;ESRRA:0.421624454881;T:0.420956320079;FOXN1:0.418598892451;NKX3-1:0.398190782075;ATF5_CREB3:0.317350056504;XCPE1{core}:0.310050967761;FOX{F1,F2,J1}:0.300845394414;IRF7:0.282013065057;FOX{I1,J2}:0.253852631567;ATF4:0.21054774742;GFI1:0.210192538507;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.155148317182;NFIL3:0.131394840093;EVI1:0.130683118449;PAX2:0.122302678184;HMX1:0.11609045008;GZF1:0.098230400282;MEF2{A,B,C,D}:0.0280197190496;PBX1:0.016836579756;NFY{A,B,C}:0.00548663563213;ALX1:-0.00715185644759;ZEB1:-0.0111020490585;HAND1,2:-0.0526798276773;NR5A1,2:-0.0748315978365;NFATC1..3:-0.0776234939237;IRF1,2:-0.0928309631718;SPZ1:-0.0944717758489;TFCP2:-0.0963175302361;NFE2L2:-0.098030067777;MYOD1:-0.119451471581;TOPORS:-0.120797505289;FOXL1:-0.178153747349;AIRE:-0.194314743359;ZNF238:-0.241518959283;NR1H4:-0.271014641218;NFE2L1:-0.275409052166;CEBPA,B_DDIT3:-0.277649403806;UFEwm:-0.282534065905;PAX3,7:-0.287809898827;CDX1,2,4:-0.307843555284;NFE2:-0.316750580281;ATF6:-0.329981772314;POU1F1:-0.339848685699;PITX1..3:-0.380874743071;NKX2-1,4:-0.390399578058;ALX4:-0.393494358076;GATA6:-0.469785895947;TBX4,5:-0.473235721751;YY1:-0.534181808042;FOXA2:-0.534259096111;SPI1:-0.577917426206;NANOG{mouse}:-0.581700490288;TP53:-0.591658027452;TBP:-0.596892931839;TLX2:-0.601202886153;TEF:-0.65698837616;ETS1,2:-0.659064052531;HNF4A_NR2F1,2:-0.666558495347;IKZF1:-0.68158762729;TFAP4:-0.702841512057;HNF1A:-0.73889951789;DMAP1_NCOR{1,2}_SMARC:-0.75438384131;NKX2-2,8:-0.77344025755;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.781022444692;SPIB:-0.806621209063;bHLH_family:-0.81142766039;HSF1,2:-0.88055871951;SNAI1..3:-0.905126291912;PAX8:-0.907077101738;HIF1A:-0.93185683147;TEAD1:-0.937193329778;ESR1:-0.940216968836;BACH2:-0.942597842913;FOS_FOS{B,L1}_JUN{B,D}:-0.948073139394;FOSL2:-0.990727282183;PAX1,9:-1.01080500855;SRF:-1.09195916311;E2F1..5:-1.2223350223;NFKB1_REL_RELA:-1.22604444369;HLF:-1.23533488092;ELK1,4_GABP{A,B1}:-1.24650392647;ELF1,2,4:-1.32985581098;RUNX1..3:-1.34702588647;RXR{A,B,G}:-1.3620364759;POU2F1..3:-1.36997617815;ZNF148:-1.43932916314;NR6A1:-1.52446640412;MYB:-1.53379996216;HES1:-1.59129664022;TAL1_TCF{3,4,12}:-1.71925284182;GLI1..3:-1.83532879427;PPARG:-1.96568154983;RXRA_VDR{dimer}:-2.33995500824;HOX{A5,B5}:-2.40760983777;STAT5{A,B}:-2.55389876892;EN1,2:-2.80531514899 | |top_motifs=REST:3.4612153696;SOX2:3.26847257765;MYFfamily:3.25720988543;NHLH1,2:3.1926523195;MTF1:3.17597833668;SOX5:3.11723342931;RREB1:3.07495197278;ZFP161:2.97161365241;HIC1:2.82044729224;DBP:2.73683031051;MED-1{core}:2.63268911072;NFIX:2.61926454577;PRDM1:2.61461677855;PRRX1,2:2.55195947251;MTE{core}:2.54256120786;ATF2:2.49698064446;RFX1:2.48625688943;SOX{8,9,10}:2.47400080459;RFX2..5_RFXANK_RFXAP:2.41887829559;ZBTB6:2.409318411;TFAP2B:2.37338760627;CUX2:2.37268629176;NANOG:2.29772577751;LMO2:2.24834892161;GFI1B:2.22705347954;OCT4_SOX2{dimer}:2.22424281469;EGR1..3:2.202735277;GATA4:2.19212214499;NKX3-2:2.18006628059;GTF2I:2.17794203561;KLF4:2.16808997816;PAX6:2.15119172651;SMAD1..7,9:2.14486352473;HOXA9_MEIS1:2.13430002242;FOXP3:2.11279044092;TGIF1:2.05958290483;HOX{A6,A7,B6,B7}:2.05454003262;PATZ1:2.05242099696;SOX17:1.99883892868;JUN:1.99090069329;HBP1_HMGB_SSRP1_UBTF:1.92926540026;MZF1:1.91456556428;MAZ:1.76236469253;EP300:1.75830779643;BREu{core}:1.73542754936;FOXD3:1.69792833156;SP1:1.69294373999;ZNF384:1.63683783841;PAX5:1.63298467978;GCM1,2:1.61007581336;NKX6-1,2:1.60414865484;AHR_ARNT_ARNT2:1.5899397087;EBF1:1.56392946264;XBP1:1.54243101565;PDX1:1.51199414622;STAT2,4,6:1.50946317993;POU6F1:1.47505309352;FOXM1:1.47251600387;ZNF423:1.45915454318;TFDP1:1.41282739735;LEF1_TCF7_TCF7L1,2:1.3953982831;BPTF:1.35868645554;MYBL2:1.32370666205;FOXP1:1.28525526481;RBPJ:1.23371814522;POU5F1:1.23295099008;NR3C1:1.19865923251;STAT1,3:1.17381931286;NRF1:1.1734158979;RORA:1.16502925818;POU3F1..4:1.15345431815;IKZF2:1.1448834086;ZIC1..3:1.13654104034;TFAP2{A,C}:1.13142209846;CDC5L:1.10772719417;ARID5B:1.06533030224;TLX1..3_NFIC{dimer}:1.02253655765;VSX1,2:1.01491920051;FOXQ1:0.996437319196;NKX2-3_NKX2-5:0.970222462504;HOX{A4,D4}:0.909130809355;ONECUT1,2:0.847569930825;FOX{D1,D2}:0.83548915154;AR:0.764225752728;SREBF1,2:0.761159280039;CRX:0.73850932352;MAFB:0.707446416353;ZNF143:0.689192998852;LHX3,4:0.663356160293;ADNP_IRX_SIX_ZHX:0.64009222103;ZBTB16:0.628451345664;HMGA1,2:0.61175983417;PAX4:0.504485105883;CREB1:0.471432125052;GTF2A1,2:0.443717262151;FOXO1,3,4:0.440905925087;ESRRA:0.421624454881;T:0.420956320079;FOXN1:0.418598892451;NKX3-1:0.398190782075;ATF5_CREB3:0.317350056504;XCPE1{core}:0.310050967761;FOX{F1,F2,J1}:0.300845394414;IRF7:0.282013065057;FOX{I1,J2}:0.253852631567;ATF4:0.21054774742;GFI1:0.210192538507;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.155148317182;NFIL3:0.131394840093;EVI1:0.130683118449;PAX2:0.122302678184;HMX1:0.11609045008;GZF1:0.098230400282;MEF2{A,B,C,D}:0.0280197190496;PBX1:0.016836579756;NFY{A,B,C}:0.00548663563213;ALX1:-0.00715185644759;ZEB1:-0.0111020490585;HAND1,2:-0.0526798276773;NR5A1,2:-0.0748315978365;NFATC1..3:-0.0776234939237;IRF1,2:-0.0928309631718;SPZ1:-0.0944717758489;TFCP2:-0.0963175302361;NFE2L2:-0.098030067777;MYOD1:-0.119451471581;TOPORS:-0.120797505289;FOXL1:-0.178153747349;AIRE:-0.194314743359;ZNF238:-0.241518959283;NR1H4:-0.271014641218;NFE2L1:-0.275409052166;CEBPA,B_DDIT3:-0.277649403806;UFEwm:-0.282534065905;PAX3,7:-0.287809898827;CDX1,2,4:-0.307843555284;NFE2:-0.316750580281;ATF6:-0.329981772314;POU1F1:-0.339848685699;PITX1..3:-0.380874743071;NKX2-1,4:-0.390399578058;ALX4:-0.393494358076;GATA6:-0.469785895947;TBX4,5:-0.473235721751;YY1:-0.534181808042;FOXA2:-0.534259096111;SPI1:-0.577917426206;NANOG{mouse}:-0.581700490288;TP53:-0.591658027452;TBP:-0.596892931839;TLX2:-0.601202886153;TEF:-0.65698837616;ETS1,2:-0.659064052531;HNF4A_NR2F1,2:-0.666558495347;IKZF1:-0.68158762729;TFAP4:-0.702841512057;HNF1A:-0.73889951789;DMAP1_NCOR{1,2}_SMARC:-0.75438384131;NKX2-2,8:-0.77344025755;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.781022444692;SPIB:-0.806621209063;bHLH_family:-0.81142766039;HSF1,2:-0.88055871951;SNAI1..3:-0.905126291912;PAX8:-0.907077101738;HIF1A:-0.93185683147;TEAD1:-0.937193329778;ESR1:-0.940216968836;BACH2:-0.942597842913;FOS_FOS{B,L1}_JUN{B,D}:-0.948073139394;FOSL2:-0.990727282183;PAX1,9:-1.01080500855;SRF:-1.09195916311;E2F1..5:-1.2223350223;NFKB1_REL_RELA:-1.22604444369;HLF:-1.23533488092;ELK1,4_GABP{A,B1}:-1.24650392647;ELF1,2,4:-1.32985581098;RUNX1..3:-1.34702588647;RXR{A,B,G}:-1.3620364759;POU2F1..3:-1.36997617815;ZNF148:-1.43932916314;NR6A1:-1.52446640412;MYB:-1.53379996216;HES1:-1.59129664022;TAL1_TCF{3,4,12}:-1.71925284182;GLI1..3:-1.83532879427;PPARG:-1.96568154983;RXRA_VDR{dimer}:-2.33995500824;HOX{A5,B5}:-2.40760983777;STAT5{A,B}:-2.55389876892;EN1,2:-2.80531514899 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10182-103D2;search_select_hide=table117:FF:10182-103D2 | |||
}} | }} |
Latest revision as of 12:25, 3 June 2020
Name: | locus coeruleus - adult, donor10196 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs13808 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13808
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13808
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0438 |
10 | 10 | 0.0425 |
100 | 100 | 0.333 |
101 | 101 | 0.824 |
102 | 102 | 0.876 |
103 | 103 | 0.0667 |
104 | 104 | 0.139 |
105 | 105 | 0.164 |
106 | 106 | 0.0521 |
107 | 107 | 0.167 |
108 | 108 | 0.913 |
109 | 109 | 0.00468 |
11 | 11 | 0.0105 |
110 | 110 | 0.0334 |
111 | 111 | 0.205 |
112 | 112 | 0.419 |
113 | 113 | 0.53 |
114 | 114 | 0.133 |
115 | 115 | 0.842 |
116 | 116 | 0.156 |
117 | 117 | 0.00714 |
118 | 118 | 0.0982 |
119 | 119 | 0.248 |
12 | 12 | 0.624 |
120 | 120 | 0.141 |
121 | 121 | 0.447 |
122 | 122 | 0.915 |
123 | 123 | 0.968 |
124 | 124 | 0.134 |
125 | 125 | 0.257 |
126 | 126 | 0.0686 |
127 | 127 | 0.45 |
128 | 128 | 0.225 |
129 | 129 | 0.448 |
13 | 13 | 0.00209 |
130 | 130 | 0.226 |
131 | 131 | 0.0231 |
132 | 132 | 0.732 |
133 | 133 | 0.0104 |
134 | 134 | 0.69 |
135 | 135 | 0.19 |
136 | 136 | 0.00643 |
137 | 137 | 0.574 |
138 | 138 | 0.775 |
139 | 139 | 0.108 |
14 | 14 | 0.898 |
140 | 140 | 0.55 |
141 | 141 | 0.496 |
142 | 142 | 0.827 |
143 | 143 | 0.0408 |
144 | 144 | 0.875 |
145 | 145 | 0.155 |
146 | 146 | 0.396 |
147 | 147 | 0.603 |
148 | 148 | 0.297 |
149 | 149 | 0.0955 |
15 | 15 | 0.0557 |
150 | 150 | 0.159 |
151 | 151 | 0.728 |
152 | 152 | 0.167 |
153 | 153 | 0.935 |
154 | 154 | 0.455 |
155 | 155 | 0.789 |
156 | 156 | 0.229 |
157 | 157 | 0.459 |
158 | 158 | 0.145 |
159 | 159 | 0.00649 |
16 | 16 | 0.0414 |
160 | 160 | 0.196 |
161 | 161 | 0.162 |
162 | 162 | 0.84 |
163 | 163 | 0.842 |
164 | 164 | 0.0108 |
165 | 165 | 0.114 |
166 | 166 | 0.963 |
167 | 167 | 0.783 |
168 | 168 | 0.357 |
169 | 169 | 0.0151 |
17 | 17 | 0.0898 |
18 | 18 | 0.072 |
19 | 19 | 0.285 |
2 | 2 | 0.895 |
20 | 20 | 0.171 |
21 | 21 | 0.0635 |
22 | 22 | 0.274 |
23 | 23 | 0.487 |
24 | 24 | 0.0379 |
25 | 25 | 0.53 |
26 | 26 | 1.51374e-4 |
27 | 27 | 0.722 |
28 | 28 | 0.791 |
29 | 29 | 0.00891 |
3 | 3 | 0.0371 |
30 | 30 | 0.866 |
31 | 31 | 0.901 |
32 | 32 | 0.0126 |
33 | 33 | 0.0704 |
34 | 34 | 0.739 |
35 | 35 | 0.378 |
36 | 36 | 0.173 |
37 | 37 | 0.0468 |
38 | 38 | 0.31 |
39 | 39 | 0.43 |
4 | 4 | 0.961 |
40 | 40 | 0.0577 |
41 | 41 | 0.29 |
42 | 42 | 0.209 |
43 | 43 | 0.118 |
44 | 44 | 0.122 |
45 | 45 | 0.714 |
46 | 46 | 0.0328 |
47 | 47 | 0.0488 |
48 | 48 | 0.0375 |
49 | 49 | 0.22 |
5 | 5 | 0.695 |
50 | 50 | 0.358 |
51 | 51 | 0.362 |
52 | 52 | 0.715 |
53 | 53 | 0.903 |
54 | 54 | 0.425 |
55 | 55 | 0.611 |
56 | 56 | 0.51 |
57 | 57 | 0.302 |
58 | 58 | 0.33 |
59 | 59 | 0.0664 |
6 | 6 | 0.939 |
60 | 60 | 0.114 |
61 | 61 | 0.0779 |
62 | 62 | 0.158 |
63 | 63 | 0.174 |
64 | 64 | 0.157 |
65 | 65 | 0.22 |
66 | 66 | 0.183 |
67 | 67 | 0.363 |
68 | 68 | 0.373 |
69 | 69 | 0.614 |
7 | 7 | 0.0847 |
70 | 70 | 0.0154 |
71 | 71 | 0.00566 |
72 | 72 | 0.356 |
73 | 73 | 0.0624 |
74 | 74 | 0.873 |
75 | 75 | 0.0204 |
76 | 76 | 0.303 |
77 | 77 | 0.162 |
78 | 78 | 0.00346 |
79 | 79 | 0.273 |
8 | 8 | 0.0575 |
80 | 80 | 0.458 |
81 | 81 | 0.427 |
82 | 82 | 0.621 |
83 | 83 | 0.0801 |
84 | 84 | 0.511 |
85 | 85 | 0.383 |
86 | 86 | 0.15 |
87 | 87 | 6.95285e-4 |
88 | 88 | 0.751 |
89 | 89 | 0.194 |
9 | 9 | 0.496 |
90 | 90 | 0.0842 |
91 | 91 | 0.699 |
92 | 92 | 0.562 |
93 | 93 | 0.585 |
94 | 94 | 0.129 |
95 | 95 | 0.0215 |
96 | 96 | 0.802 |
97 | 97 | 0.605 |
98 | 98 | 0.248 |
99 | 99 | 0.526 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13808
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
FF:0011487 human locus coeruleus- adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0000988 (pons)
0002148 (locus ceruleus)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002680 (regional part of metencephalon)
0002616 (regional part of brain)
0004733 (segmental subdivision of hindbrain)
0004732 (segmental subdivision of nervous system)
0006331 (brainstem nucleus)
0009662 (hindbrain nucleus)
0000125 (neural nucleus)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0002308 (nucleus of brain)
0001017 (central nervous system)
0001016 (nervous system)
0001895 (metencephalon)
0002298 (brainstem)
0002028 (hindbrain)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0011487 (human locus coeruleus- adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)