FF:10452-106G2: Difference between revisions

Latest revision as of 14:03, 3 June 2020

Name:	cord blood derived cell line:COBL-a 24h infection(-C)
Species:	Human (Homo sapiens)
Library ID:	CNhs11049
Sample type:	cell lines
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	NA
age	NA
cell type	unclassifiable
cell line	COBL-a
company	NA
collaboration	Chieko Kai (University of Tokyo)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005051

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11049		CAGE		DRX007864		DRR008736

Accession ID Hg19

Library id		BAM		CTSS
CNhs11049		DRZ000161		DRZ001546

Accession ID Hg38

Library id		BAM		CTSS
CNhs11049		DRZ011511		DRZ012896

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.162
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.541
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0394
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.109
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.113
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.202
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.113
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.286
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.251
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.113
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0.113
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0484
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0.113
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0.925
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.113
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.092
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.202
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.82
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.0367
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.113
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.202
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.113
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.358
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.264
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.113
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.0234
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11049

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0343
MA0003.1	MA0003.1	0.24
MA0004.1	MA0004.1	0.688
MA0006.1	MA0006.1	0.197
MA0007.1	MA0007.1	0.253
MA0009.1	MA0009.1	0.973
MA0014.1	MA0014.1	0.574
MA0017.1	MA0017.1	0.258
MA0018.2	MA0018.2	2.25756e-11
MA0019.1	MA0019.1	0.799
MA0024.1	MA0024.1	7.78444e-4
MA0025.1	MA0025.1	0.396
MA0027.1	MA0027.1	0.484
MA0028.1	MA0028.1	3.73469e-5
MA0029.1	MA0029.1	0.0555
MA0030.1	MA0030.1	0.269
MA0031.1	MA0031.1	0.441
MA0035.2	MA0035.2	0.00627
MA0038.1	MA0038.1	0.00236
MA0039.2	MA0039.2	0.444
MA0040.1	MA0040.1	0.0429
MA0041.1	MA0041.1	0.267
MA0042.1	MA0042.1	0.243
MA0043.1	MA0043.1	2.04815e-5
MA0046.1	MA0046.1	0.087
MA0047.2	MA0047.2	0.533
MA0048.1	MA0048.1	0.125
MA0050.1	MA0050.1	0.00928
MA0051.1	MA0051.1	0.0115
MA0052.1	MA0052.1	0.534
MA0055.1	MA0055.1	0.0393
MA0057.1	MA0057.1	0.185
MA0058.1	MA0058.1	0.569
MA0059.1	MA0059.1	0.638
MA0060.1	MA0060.1	6.58777e-19
MA0061.1	MA0061.1	3.57085e-12
MA0062.2	MA0062.2	3.98272e-7
MA0065.2	MA0065.2	0.471
MA0066.1	MA0066.1	0.0221
MA0067.1	MA0067.1	0.0395
MA0068.1	MA0068.1	0.0164
MA0069.1	MA0069.1	0.96
MA0070.1	MA0070.1	0.568
MA0071.1	MA0071.1	0.711
MA0072.1	MA0072.1	0.016
MA0073.1	MA0073.1	0.682
MA0074.1	MA0074.1	0.514
MA0076.1	MA0076.1	7.44874e-6
MA0077.1	MA0077.1	0.735
MA0078.1	MA0078.1	0.269
MA0079.2	MA0079.2	0.369
MA0080.2	MA0080.2	0.324
MA0081.1	MA0081.1	0.934
MA0083.1	MA0083.1	0.0281
MA0084.1	MA0084.1	0.936
MA0087.1	MA0087.1	0.278
MA0088.1	MA0088.1	0.418
MA0090.1	MA0090.1	9.96853e-4
MA0091.1	MA0091.1	0.0403
MA0092.1	MA0092.1	0.0971
MA0093.1	MA0093.1	0.584
MA0099.2	MA0099.2	0.462
MA0100.1	MA0100.1	0.269
MA0101.1	MA0101.1	1.97125e-14
MA0102.2	MA0102.2	0.364
MA0103.1	MA0103.1	0.0422
MA0104.2	MA0104.2	0.0559
MA0105.1	MA0105.1	1.11777e-4
MA0106.1	MA0106.1	0.0746
MA0107.1	MA0107.1	8.53403e-18
MA0108.2	MA0108.2	0.787
MA0111.1	MA0111.1	0.814
MA0112.2	MA0112.2	0.00506
MA0113.1	MA0113.1	0.0502
MA0114.1	MA0114.1	0.824
MA0115.1	MA0115.1	0.856
MA0116.1	MA0116.1	0.607
MA0117.1	MA0117.1	0.009
MA0119.1	MA0119.1	0.193
MA0122.1	MA0122.1	0.413
MA0124.1	MA0124.1	0.537
MA0125.1	MA0125.1	0.464
MA0131.1	MA0131.1	0.042
MA0135.1	MA0135.1	0.00373
MA0136.1	MA0136.1	0.552
MA0137.2	MA0137.2	0.0208
MA0138.2	MA0138.2	0.0199
MA0139.1	MA0139.1	0.752
MA0140.1	MA0140.1	4.6195e-4
MA0141.1	MA0141.1	0.423
MA0142.1	MA0142.1	0.337
MA0143.1	MA0143.1	0.0123
MA0144.1	MA0144.1	0.905
MA0145.1	MA0145.1	0.054
MA0146.1	MA0146.1	0.206
MA0147.1	MA0147.1	0.0648
MA0148.1	MA0148.1	0.427
MA0149.1	MA0149.1	0.617
MA0150.1	MA0150.1	0.795
MA0152.1	MA0152.1	0.309
MA0153.1	MA0153.1	0.00214
MA0154.1	MA0154.1	0.354
MA0155.1	MA0155.1	0.0842
MA0156.1	MA0156.1	0.0799
MA0157.1	MA0157.1	0.159
MA0159.1	MA0159.1	0.846
MA0160.1	MA0160.1	0.227
MA0162.1	MA0162.1	0.0378
MA0163.1	MA0163.1	0.762
MA0164.1	MA0164.1	0.43
MA0258.1	MA0258.1	0.0538
MA0259.1	MA0259.1	0.2

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11049

Novel motif	Logo	P-value
1	1	0.805
10	10	0.135
100	100	0.249
101	101	0.252
102	102	0.965
103	103	0.381
104	104	0.822
105	105	0.919
106	106	0.0533
107	107	0.027
108	108	0.54
109	109	0.363
11	11	0.315
110	110	0.281
111	111	0.968
112	112	0.096
113	113	0.95
114	114	0.179
115	115	0.156
116	116	0.705
117	117	0.443
118	118	0.778
119	119	0.451
12	12	0.579
120	120	0.431
121	121	0.733
122	122	0.502
123	123	0.239
124	124	0.704
125	125	0.995
126	126	0.649
127	127	0.215
128	128	0.0161
129	129	0.377
13	13	0.147
130	130	0.216
131	131	0.593
132	132	0.199
133	133	0.917
134	134	0.555
135	135	0.377
136	136	0.587
137	137	0.82
138	138	0.0845
139	139	0.453
14	14	0.726
140	140	0.503
141	141	0.529
142	142	0.932
143	143	0.438
144	144	0.984
145	145	0.404
146	146	0.291
147	147	0.204
148	148	0.436
149	149	0.00548
15	15	0.673
150	150	0.49
151	151	0.17
152	152	0.0584
153	153	0.586
154	154	0.979
155	155	0.631
156	156	0.808
157	157	0.767
158	158	0.548
159	159	0.703
16	16	0.173
160	160	0.0715
161	161	0.998
162	162	0.22
163	163	0.749
164	164	0.173
165	165	0.855
166	166	0.658
167	167	0.209
168	168	0.411
169	169	0.0197
17	17	0.254
18	18	0.605
19	19	0.0406
2	2	0.0244
20	20	0.0561
21	21	0.624
22	22	0.0851
23	23	0.109
24	24	0.742
25	25	0.725
26	26	0.814
27	27	0.0545
28	28	0.455
29	29	0.689
3	3	0.431
30	30	0.0531
31	31	0.343
32	32	0.01
33	33	0.8
34	34	0.146
35	35	0.844
36	36	0.0849
37	37	0.768
38	38	0.506
39	39	0.431
4	4	0.0115
40	40	0.761
41	41	0.447
42	42	0.749
43	43	0.78
44	44	0.143
45	45	0.235
46	46	0.385
47	47	0.592
48	48	0.447
49	49	0.683
5	5	0.479
50	50	0.715
51	51	0.403
52	52	0.256
53	53	0.925
54	54	0.281
55	55	0.0265
56	56	0.531
57	57	0.674
58	58	0.933
59	59	0.0721
6	6	0.972
60	60	0.373
61	61	0.955
62	62	0.734
63	63	0.282
64	64	0.743
65	65	0.213
66	66	8.05369e-7
67	67	0.416
68	68	0.342
69	69	0.168
7	7	0.81
70	70	0.267
71	71	0.923
72	72	0.381
73	73	0.124
74	74	0.464
75	75	0.888
76	76	0.343
77	77	0.00207
78	78	0.578
79	79	0.0471
8	8	0.169
80	80	0.318
81	81	0.442
82	82	0.13
83	83	0.771
84	84	0.42
85	85	0.0423
86	86	0.57
87	87	0.804
88	88	0.795
89	89	0.00312
9	9	0.228
90	90	0.771
91	91	0.125
92	92	0.217
93	93	0.842
94	94	0.345
95	95	0.84
96	96	0.905
97	97	0.453
98	98	0.108
99	99	0.00918

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11049

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
CL:0000081 blood cell
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0000625 experimental infection sample
FF:0104053 umbilical cord blood sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000081 (blood cell)
0000255 (eukaryotic cell)
0000080 (circulating cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000178 (blood)
0002331 (umbilical cord)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000478 (extraembryonic structure)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0101035 (hematopoietic cell line sample)
0104053 (umbilical cord blood sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000178,UBERON:0002331,UBERON:0000926,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000480,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000478,UBERON:0005291,UBERON:0006598,UBERON:0002532,UBERON:0000358,UBERON:0002390,UBERON:0004535,UBERON:0000307,UBERON:0002193,UBERON:0003081,UBERON:0001009,UBERON:0000091,UBERON:0000087,UBERON:0006603,UBERON:0007806,UBERON:0003061,UBERON:0008780,UBERON:0005728
+|DRA_sample_Accession=CAGE@SAMD00005051
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000144,CL:0000988,CL:0000548,CL:0000012,CL:0002371,CL:0000081,CL:0000004,CL:0000255,CL:0000080
+|accession_numbers=CAGE;DRX007864;DRR008736;DRZ000161;DRZ001546;DRZ011511;DRZ012896
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000178,UBERON:0002331,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000478,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000081,CL:0000255,CL:0000080
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0000625,FF:0101035,FF:0104053
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr6:391743..391759,+!p1@IRF4!2.69!485.11!IRF4;;chr3:189349162..189349207,+!p2@TP63!2.43!268.35!TP63;;chr10:64576105..64576133,-!p1@EGR2!2.20!312.53!EGR2;;chr8:11561684..11561751,+!p1@GATA4!2.15!140.25!GATA4;;chr11:129245736..129245758,+!p2@BARX2!2.13!135.21!BARX2;;chr2:231090471..231090504,+!p2@SP140!2.10!126.32!SP140;;chr13:28494130..28494168,+!p1@PDX1!2.09!122.17!PDX1;;chr14:75988831..75988847,+!p2@BATF!2.09!120.68!BATF;;chr12:103351444..103351461,+!p1@ASCL1!2.07!117.42!ASCL1;;chr17:38020392..38020477,-!p1@IKZF3!2.05!112.08!IKZF3;;chr3:101546827..101546847,+!p2@NFKBIZ!2.04!151.52!NFKBIZ;;chr19:36204309..36204335,+!p1@ZBTB32!1.96!89.25!ZBTB32;;chr9:77112244..77112262,+!p1@RORB!1.95!98.15!RORB;;chr14:75988771..75988826,+!p1@BATF!1.93!110.60!BATF;;chr18:55102598..55102623,+!p1@ONECUT2!1.93!83.92!ONECUT2;;chr17:46703687..46703740,-!p1@HOXB9!1.91!80.95!HOXB9;;chr17:45810594..45810608,+!p1@TBX21!1.90!77.69!TBX21;;chr1:212873084..212873137,-!p2@BATF3!1.85!69.68!BATF3;;chr6:135502408..135502459,+!p2@MYB!1.84!78.28!MYB;;chr12:48276548..48276564,-!p3@VDR!1.84!67.90!VDR;;chr6:91006518..91006570,-!p1@BACH2!1.80!137.59!BACH2;;chr6:135502501..135502546,+!p1@MYB!1.77!68.79!MYB;;chr6:137815524..137815537,-!p1@OLIG3!1.77!57.82!OLIG3;;chr2:61108878..61108891,+!p5@REL!1.77!57.53!REL;;chr10:64576035..64576046,-!p2@EGR2!1.76!56.64!EGR2;;chr15:60884706..60884743,-!p1@RORA!1.75!274.28!RORA;;chr11:31832658..31832681,-!p1@PAX6!1.74!53.37!PAX6;;chr2:157189180..157189290,-!p1@NR4A2!1.73!259.16!NR4A2;;chr12:52445218..52445237,+!p1@NR4A1!1.72!617.06!NR4A1;;chr2:61108808..61108821,+!p3@REL!1.68!59.01!REL;;chr11:129245526..129245553,+!p1@BARX2!1.68!46.85!BARX2;;chr1:212873162..212873188,-!p3@BATF3!1.68!46.85!BATF3;;chr3:111314186..111314204,-!p1@ZBED2!1.67!46.26!ZBED2;;chr2:231090433..231090469,+!p1@SP140!1.64!42.70!SP140;;chr3:141087339..141087387,+!p2@ZBTB38!1.60!382.22!ZBTB38;;chr3:141087393..141087426,+!p3@ZBTB38!1.58!141.14!ZBTB38;;chr2:73520667..73520683,-!p1@EGR4!1.56!34.99!EGR4;;chr2:176969228..176969260,+!p1@HOXD11!1.54!33.80!HOXD11;;chr19:19976683..19976709,+!p1@ZNF253!1.53!139.07!ZNF253;;chr10:104155659..104155676,+!p4@NFKB2!1.53!40.92!NFKB2;;chr1:212782094..212782109,+!p1@ATF3!1.51!805.94!ATF3;;chr2:185463247..185463263,+!p1@ZNF804A!1.51!54.86!ZNF804A;;chr12:103352277..103352324,+!p2@ASCL1!1.51!31.13!ASCL1;;chr20:50159198..50159299,-!p1@NFATC2!1.50!44.48!NFATC2;;chr19:12203100..12203132,+!p1@ZNF788!1.49!59.90!ZNF788;;chr8:22550982..22550999,-!p1@EGR3!1.48!80.36!EGR3;;chr18:55102628..55102646,+!p2@ONECUT2!1.48!29.36!ONECUT2;;chr17:46703436..46703460,-!p7@HOXB9!1.46!28.17!HOXB9;;chr1:212873061..212873080,-!p4@BATF3!1.46!27.87!BATF3;;chr2:61108695..61108753,+!p1@REL!1.45!181.47!REL;;chr6:106546808..106546833,+!p3@PRDM1!1.45!34.40!PRDM1;;chr17:40440359..40440386,+!p4@STAT5A!1.43!26.09!STAT5A;;chr1:25291475..25291511,-!p2@RUNX3!1.43!25.80!RUNX3;;chr4:26322267..26322334,+!p3@RBPJ!1.41!59.01!RBPJ;;chr17:40441354..40441410,+!p2@STAT5A!1.40!24.31!STAT5A;;chr4:144435112..144435176,+!p3@SMARCA5!1.39!47.44!SMARCA5;;chr2:61108771..61108789,+!p4@REL!1.39!35.29!REL;;chr4:57522513..57522548,-!p4@HOPX!1.39!23.43!HOPX;;chr1:3569072..3569093,+!p1@TP73!1.39!23.43!TP73;;chr20:51588873..51588953,+!p1@TSHZ2!1.37!29.36!TSHZ2;;chr13:28494109..28494122,+!p2@PDX1!1.37!22.54!PDX1;;chr3:181429704..181429722,+!p1@SOX2!1.37!22.24!SOX2;;chr12:19593515..19593573,+!p9@AEBP2!1.36!29.65!AEBP2;;chr1:27023752..27023799,+!p4@ARID1A!1.35!27.87!ARID1A;;chr19:19976714..19976729,+!p3@ZNF253!1.34!38.84!ZNF253;;chr1:212873267..212873332,-!p1@BATF3!1.34!28.17!BATF3;;chr3:181429741..181429767,+!p2@SOX2!1.34!20.76!SOX2;;chr6:126102292..126102329,+!p3@NCOA7!1.33!65.83!NCOA7;;chr19:12444440..12444455,-!p1@ZNF563!1.33!35.29!ZNF563;;chr17:8027418..8027432,-!p1@HES7!1.33!20.46!HES7;;chr16:31885093..31885165,+!p1@ZNF267!1.31!290.29!ZNF267;;chr19:45252008..45252024,+!p2@BCL3!1.31!63.46!BCL3;;chr1:6684918..6684936,+!p2@THAP3!1.31!23.43!THAP3;;chr17:40440446..40440464,+!p5@STAT5A!1.31!19.57!STAT5A;;chr2:45168875..45168916,+!p1@SIX3!1.31!19.57!SIX3;;chr3:141087562..141087594,+!p12@ZBTB38!1.31!19.57!ZBTB38;;chrY:2803415..2803468,+!p1@ZFY!1.31!19.57!ZFY;;chr4:57522476..57522500,-!p7@HOPX!1.29!18.38!HOPX;;chr2:145274981..145274994,-!p9@ZEB2!1.28!26.39!ZEB2;;chr2:192015701..192015743,-!p1@STAT4!1.28!24.91!STAT4;;chr10:8096772..8096787,+!p2@GATA3!1.28!21.05!GATA3;;chr20:6748325..6748352,+!p1@BMP2!1.27!25.50!BMP2;;chr7:50344289..50344323,+!p1@IKZF1!1.27!17.79!IKZF1;;chr6:135502472..135502489,+!p3@MYB!1.27!17.49!MYB;;chr13:28494180..28494196,+!p3@PDX1!1.27!17.49!PDX1;;chr6:144385698..144385742,-!p2@PLAGL1!1.25!20.16!PLAGL1;;chr1:212873200..212873230,-!p5@BATF3!1.25!16.90!BATF3;;chr14:35873947..35873965,-!p1@NFKBIA!1.24!999.87!NFKBIA;;chr10:104155480..104155534,+!p2@NFKB2!1.23!101.41!NFKB2;;chr1:214161272..214161322,+!p1@PROX1!1.23!22.54!PROX1;;chr4:26324474..26324501,+!p16@RBPJ!1.23!16.01!RBPJ;;chr6:36355360..36355392,-!p4@ETV7!1.22!15.72!ETV7;;chr2:145274900..145274934,-!p4@ZEB2!1.21!91.03!ZEB2;;chr6:126240442..126240459,+!p4@NCOA7!1.21!19.57!NCOA7;;chr21:47063625..47063658,+!p1@PCBP3!1.20!63.75!PCBP3;;chr10:8096631..8096660,+!p1@GATA3!1.20!17.79!GATA3;;chr17:46703528..46703549,-!p5@HOXB9!1.20!14.83!HOXB9;;chr2:145274998..145275012,-!p13@ZEB2!1.19!16.31!ZEB2;;chr3:101568349..101568365,+!p1@NFKBIZ!1.18!728.26!NFKBIZ;;chr10:104154246..104154347,+!p3@NFKB2!1.18!85.40!NFKB2;;chr19:21203481..21203504,+!p2@ZNF430!1.18!32.91!ZNF430;;chr3:189348969..189349018,+!p4@TP63!1.18!14.23!TP63;;chr18:77155922..77155939,+!p1@NFATC1!1.17!37.95!NFATC1;;chr2:176969179..176969226,+!p2@HOXD11!1.17!13.94!HOXD11;;chr11:31832610..31832639,-!p5@PAX6!1.17!13.94!PAX6;;chr12:54393880..54393962,+!p1@HOXC9!1.16!13.34!HOXC9;;chr3:141747950..141748004,-!p7@TFDP2!1.16!13.34!TFDP2;;chr1:158978768..158978800,+!p8@IFI16!1.16!13.34!IFI16;;chr19:57791876..57791892,+!p5@ZNF460!1.15!20.76!ZNF460;;chr11:34645791..34645836,+!p3@EHF!1.15!13.05!EHF;;chr4:26323870..26323885,+!p13@RBPJ!1.15!13.05!RBPJ;;chr3:141747459..141747475,-!p1@TFDP2!1.14!106.15!TFDP2;;chr6:91006296..91006308,-!p7@BACH2!1.14!12.75!BACH2;;chr11:31832581..31832601,-!p7@PAX6!1.14!12.75!PAX6;;chr6:126240380..126240430,+!p2@NCOA7!1.13!32.62!NCOA7;;chr6:50786591..50786614,+!p1@TFAP2B!1.13!12.45!TFAP2B;;chr3:157824202..157824211,-!p3@SHOX2!1.13!12.45!SHOX2;;chr3:189349132..189349142,+!p7@TP63!1.13!12.45!TP63;;chr10:104155680..104155687,+!p6@NFKB2!1.13!12.45!NFKB2;;chr1:25256756..25256774,-!p1@RUNX3!1.12!23.13!RUNX3;;chr1:92949331..92949377,-!p2@GFI1!1.12!12.16!GFI1;;chr19:57791328..57791377,+!p2@ZNF460!1.11!142.92!ZNF460;;chr10:8095593..8095625,+!p3@GATA3!1.11!13.94!GATA3;;chr14:75988851..75988862,+!p3@BATF!1.11!11.86!BATF;;chr6:106546834..106546850,+!p4@PRDM1!1.11!11.86!PRDM1;;chr14:75745523..75745537,+!p1@FOS!1.10!1380.01!FOS;;chr12:56415246..56415286,+!p2@IKZF4!1.10!11.56!IKZF4;;chr2:231090344..231090361,-!p3@SP110!1.10!11.56!SP110;;chr5:158526917..158526932,-!p1@EBF1!1.09!28.17!EBF1;;chr11:61520075..61520136,+!p1@C11orf9!1.09!24.31!C11orf9;;chr8:116681123..116681143,-!p4@TRPS1!1.09!22.24!TRPS1;;chr6:1610293..1610310,+!p1@FOXC1!1.09!18.98!FOXC1;;chr12:24715376..24715432,-!p1@SOX5!1.09!14.53!SOX5;;chr20:20348740..20348757,+!p1@INSM1!1.09!11.27!INSM1;;chr1:92951607..92951661,-!p1@GFI1!1.08!10.97!GFI1;;chr5:137801160..137801176,+!p1@EGR1!1.07!1080.23!EGR1;;chr9:2015335..2015370,+!p1@SMARCA2!1.07!132.84!SMARCA2;;chr12:27485762..27485776,+!p3@ARNTL2!1.07!29.06!ARNTL2;;chr12:27485889..27485900,+!p4@ARNTL2!1.07!13.05!ARNTL2;;chr4:4861385..4861398,+!p1@MSX1!1.06!31.73!MSX1;;chr8:60031619..60031676,-!p1@TOX!1.06!23.13!TOX;;chr1:247171316..247171336,-!p3@ZNF695!1.06!15.72!ZNF695;;chr5:1883024..1883046,-!p5@IRX4!1.06!10.38!IRX4;;chr7:106810484..106810494,+!p4@HBP1!1.06!10.38!HBP1;;chr2:97202480..97202499,+!p1@ARID5A!1.05!104.67!ARID5A;;chr3:128206762..128206781,-!p2@GATA2!1.05!64.64!GATA2;;chr10:35484053..35484076,+!p1@CREM!1.05!25.50!CREM;;chr14:103059006..103059017,+!p2@RCOR1!1.05!16.01!RCOR1;;chr17:70117153..70117174,+!p1@SOX9!1.04!104.97!SOX9;;chr19:19729477..19729542,-!p1@PBX4!1.04!21.35!PBX4;;chr19:21950332..21950356,-!p2@ZNF100!1.04!21.35!ZNF100;;chr19:57791917..57791937,+!p4@ZNF460!1.04!17.49!ZNF460;;chr8:60031682..60031710,-!p2@TOX!1.04!16.31!TOX;;chr1:42801540..42801562,-!p4@FOXJ3!1.04!10.08!FOXJ3;;chr17:38020557..38020572,-!p4@IKZF3!1.04!10.08!IKZF3;;chr19:12902289..12902307,+!p1@JUNB!1.03!2243.18!JUNB;;chr12:48298765..48298783,-!p2@VDR!1.03!20.76!VDR;;chr6:137815425..137815444,-!p2@OLIG3!1.03!9.79!OLIG3;;chr8:11561453..11561466,+!p2@GATA4!1.03!9.79!GATA4;;chr9:1050331..1050363,+!p1@DMRT2!1.03!9.79!DMRT2;;chr16:69599899..69599919,+!p2@NFAT5!1.02!110.31!NFAT5;;chr7:50344251..50344288,+!p3@IKZF1!1.02!9.49!IKZF1;;chr19:19932513..19932569,-!p1@ZNF506!1.01!175.84!ZNF506;;chr5:137804484..137804498,+!p2@EGR1!1.01!37.66!EGR1;;chr7:35293685..35293718,-!p1@TBX20!1.01!9.19!TBX20;;chr11:31832549..31832562,-!p10@PAX6!1.01!9.19!PAX6;;chr19:47523058..47523114,+!p1@NPAS1!1.01!9.19!NPAS1;;chr19:45971246..45971265,+!p1@FOSB!1.00!172.28!FOSB;;chr7:148581360..148581425,-!p1@EZH2!1.00!45.07!EZH2;;chr6:126102254..126102289,+!p5@NCOA7!1.00!25.20!NCOA7;;chr1:161736038..161736056,+!p4@ATF6!1.00!21.65!ATF6;;chr19:21265028..21265052,+!p2@ZNF714!1.00!16.31!ZNF714;;chr2:45168959..45168990,+!p6@SIX3!1.00!8.90!SIX3;;chr1:203764633..203764674,+!p2@ZC3H11A!0.99!14.23!ZC3H11A;;chr8:81397876..81397898,+!p5@ZBTB10!0.99!10.38!ZBTB10;;chr6:126240463..126240489,+!p6@NCOA7!0.99!9.79!NCOA7;;chr6:106534192..106534224,+!p1@PRDM1!0.97!24.02!PRDM1;;chr2:172967621..172967637,-!p1@DLX2!0.97!23.13!DLX2;;chr16:31724618..31724630,+!p2@ZNF720!0.97!16.01!ZNF720;;chr5:1882170..1882182,-!p3@IRX4!0.97!8.30!IRX4;;chr12:57914286..57914304,-!p1@DDIT3!0.96!300.38!DDIT3;;chr19:18392236..18392248,-!p2@JUND!0.96!55.15!JUND;;chr12:27485823..27485868,+!p2@ARNTL2!0.96!34.10!ARNTL2;;chr7:19157248..19157268,-!p1@TWIST1!0.96!22.83!TWIST1;;chr14:35872453..35872485,-!p2@NFKBIA!0.96!20.46!NFKBIA;;chr4:26322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@@ Line 35: / Line 40: @@
 |fonse_treatment_closure=FF:0000625,FF:10452-106G2
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/cord%2520blood%2520derived%2520cell%2520line%253aCOBL-a%252024h%2520infection%2528-C%2529.CNhs11049.10452-106G2.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/cord%2520blood%2520derived%2520cell%2520line%253aCOBL-a%252024h%2520infection%2528-C%2529.CNhs11049.10452-106G2.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/cord%2520blood%2520derived%2520cell%2520line%253aCOBL-a%252024h%2520infection%2528-C%2529.CNhs11049.10452-106G2.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/cord%2520blood%2520derived%2520cell%2520line%253aCOBL-a%252024h%2520infection%2528-C%2529.CNhs11049.10452-106G2.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/cord%2520blood%2520derived%2520cell%2520line%253aCOBL-a%252024h%2520infection%2528-C%2529.CNhs11049.10452-106G2.hg38.nobarcode.ctss.bed.gz
 |id=FF:10452-106G2
-|is_a=CL:0000081;;EFO:0002091;;FF:0000003;;FF:0000210;;FF:0000625;;FF:0104053
+|is_a=CL:0000081;;EFO:0002091;;FF:0000210;;FF:0000625;;FF:0104053
+|is_obsolete=
+|library_id=CNhs11049
+|library_id_phase_based=2:CNhs11049
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10452
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10452
 |name=cord blood derived cell line:COBL-a 24h infection(-C)
 |namespace=FANTOM5
@@ Line 42: / Line 59: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11049,LSID722,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=106
 |rna_catalog_number=
@@ Line 57: / Line 77: @@
 |rna_weight_ug=11.14075
 |sample_age=
+|sample_category=cell lines
 |sample_cell_catalog=
 |sample_cell_line=COBL-a
@@ Line 69: / Line 90: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.06115141042651e-271!GO:0043227;membrane-bound organelle;6.97224314185328e-235!GO:0043226;organelle;1.81659517821432e-234!GO:0043231;intracellular membrane-bound organelle;2.56978725924351e-234!GO:0043229;intracellular organelle;1.04308900399563e-233!GO:0044422;organelle part;2.14461267061291e-150!GO:0044446;intracellular organelle part;3.39036672926845e-148!GO:0005737;cytoplasm;7.69887466193903e-143!GO:0005634;nucleus;1.28329898741518e-140!GO:0043170;macromolecule metabolic process;1.18660603638134e-117!GO:0044237;cellular metabolic process;8.29051916152903e-117!GO:0032991;macromolecular complex;9.95134777008563e-117!GO:0044238;primary metabolic process;1.2723993561375e-115!GO:0044428;nuclear part;2.76091327054084e-97!GO:0030529;ribonucleoprotein complex;4.45865641418903e-95!GO:0044444;cytoplasmic part;2.08697916975826e-91!GO:0003723;RNA binding;1.99888270827176e-90!GO:0043233;organelle lumen;1.81901394768092e-89!GO:0031974;membrane-enclosed lumen;1.81901394768092e-89!GO:0043283;biopolymer metabolic process;4.35490423742891e-89!GO:0010467;gene expression;5.11587712051243e-81!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.20244787570689e-80!GO:0005515;protein binding;1.52299337664755e-77!GO:0003676;nucleic acid binding;1.16681555208443e-65!GO:0006396;RNA processing;1.31726948716815e-65!GO:0031981;nuclear lumen;1.01834857725608e-61!GO:0006412;translation;1.19593934977771e-60!GO:0043234;protein complex;3.93523446630276e-60!GO:0005739;mitochondrion;4.05210937149484e-54!GO:0016071;mRNA metabolic process;2.33462163015629e-53!GO:0005840;ribosome;3.39533147558449e-50!GO:0016070;RNA metabolic process;3.95278880072679e-49!GO:0006259;DNA metabolic process;2.16072102722296e-48!GO:0019538;protein metabolic process;2.51727696593488e-48!GO:0016043;cellular component organization and biogenesis;3.50754977736627e-46!GO:0008380;RNA splicing;5.90890461114632e-45!GO:0044267;cellular protein metabolic process;3.28613903716352e-44!GO:0006397;mRNA processing;4.79113452896388e-44!GO:0006996;organelle organization and biogenesis;1.54014831709028e-43!GO:0003735;structural constituent of ribosome;2.00673615224806e-43!GO:0033036;macromolecule localization;5.09166799948008e-43!GO:0044260;cellular macromolecule metabolic process;1.02853590568461e-42!GO:0015031;protein transport;4.24090525470303e-41!GO:0044249;cellular biosynthetic process;4.56064767863145e-40!GO:0005654;nucleoplasm;6.21410950831213e-40!GO:0009059;macromolecule biosynthetic process;9.82452988891394e-40!GO:0043228;non-membrane-bound organelle;1.27822296732412e-38!GO:0043232;intracellular non-membrane-bound organelle;1.27822296732412e-38!GO:0033279;ribosomal subunit;5.18366174295037e-38!GO:0008104;protein localization;5.2941976692303e-38!GO:0045184;establishment of protein localization;7.53513398160535e-38!GO:0046907;intracellular transport;2.24504380677877e-37!GO:0007049;cell cycle;2.90423431328937e-37!GO:0009058;biosynthetic process;1.88932302982307e-36!GO:0031090;organelle membrane;5.55192594315454e-36!GO:0044429;mitochondrial part;7.60823726632746e-36!GO:0000166;nucleotide binding;1.12563027671722e-35!GO:0031967;organelle envelope;9.75629998513251e-35!GO:0031975;envelope;1.52423558701501e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.42525767847287e-34!GO:0065003;macromolecular complex assembly;3.87713464047467e-33!GO:0005681;spliceosome;1.4782137268732e-32!GO:0005829;cytosol;1.93823309061099e-32!GO:0022402;cell cycle process;4.16302801134816e-31!GO:0006974;response to DNA damage stimulus;1.27125832973818e-30!GO:0044451;nucleoplasm part;6.37312673602933e-30!GO:0006886;intracellular protein transport;1.07465107177704e-29!GO:0022607;cellular component assembly;1.01174279208692e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.1499585048798e-27!GO:0006281;DNA repair;3.04025134873311e-27!GO:0000278;mitotic cell cycle;3.04025134873311e-27!GO:0051649;establishment of cellular localization;6.97095883215401e-27!GO:0051641;cellular localization;2.5453985308884e-26!GO:0005694;chromosome;5.0024016660081e-26!GO:0032553;ribonucleotide binding;3.12366392054603e-25!GO:0032555;purine ribonucleotide binding;3.12366392054603e-25!GO:0017076;purine nucleotide binding;3.09792366801279e-24!GO:0005524;ATP binding;1.80153515364793e-23!GO:0016874;ligase activity;3.70118521013317e-23!GO:0044445;cytosolic part;4.70666396836538e-23!GO:0032559;adenyl ribonucleotide binding;5.90759312968416e-23!GO:0006366;transcription from RNA polymerase II promoter;9.05396856342735e-23!GO:0044427;chromosomal part;1.61681890149871e-22!GO:0051276;chromosome organization and biogenesis;1.63654759578933e-22!GO:0005730;nucleolus;1.9587153198213e-22!GO:0008134;transcription factor binding;1.99240193991634e-22!GO:0006512;ubiquitin cycle;2.54124400043929e-22!GO:0017111;nucleoside-triphosphatase activity;4.100271489959e-22!GO:0019866;organelle inner membrane;7.68134901748104e-22!GO:0030554;adenyl nucleotide binding;8.59290289391507e-22!GO:0016462;pyrophosphatase activity;1.52193074218116e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.78579264026165e-21!GO:0000087;M phase of mitotic cell cycle;2.6068898451437e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;3.01740659353388e-21!GO:0022403;cell cycle phase;6.72252341932044e-21!GO:0007067;mitosis;9.36224620752019e-21!GO:0009719;response to endogenous stimulus;1.33686537582548e-20!GO:0015935;small ribosomal subunit;2.03513771935622e-20!GO:0006457;protein folding;4.17119388912992e-20!GO:0005740;mitochondrial envelope;7.63588377146936e-20!GO:0031980;mitochondrial lumen;7.87358060520018e-20!GO:0005759;mitochondrial matrix;7.87358060520018e-20!GO:0005743;mitochondrial inner membrane;3.63012672806848e-19!GO:0022618;protein-RNA complex assembly;4.99391135399342e-19!GO:0031966;mitochondrial membrane;5.65028230903587e-19!GO:0015934;large ribosomal subunit;2.4700170278254e-18!GO:0050794;regulation of cellular process;4.46023130167498e-18!GO:0012501;programmed cell death;6.40423103522979e-18!GO:0006915;apoptosis;6.60216786203753e-18!GO:0008135;translation factor activity, nucleic acid binding;7.5298675641497e-18!GO:0006260;DNA replication;8.11465014714495e-18!GO:0000279;M phase;8.35495017091403e-18!GO:0006325;establishment and/or maintenance of chromatin architecture;9.63079508703736e-18!GO:0012505;endomembrane system;1.87754393375096e-17!GO:0044265;cellular macromolecule catabolic process;2.41544563793586e-17!GO:0006119;oxidative phosphorylation;2.41544563793586e-17!GO:0019941;modification-dependent protein catabolic process;2.47390845091458e-17!GO:0043632;modification-dependent macromolecule catabolic process;2.47390845091458e-17!GO:0051301;cell division;2.82240306541088e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;3.65962777297656e-17!GO:0051726;regulation of cell cycle;3.7906543370111e-17!GO:0000074;regulation of progression through cell cycle;4.02785058899306e-17!GO:0006323;DNA packaging;4.76758725590754e-17!GO:0043412;biopolymer modification;5.04307740871565e-17!GO:0006511;ubiquitin-dependent protein catabolic process;6.1090028483115e-17!GO:0042623;ATPase activity, coupled;7.40809190569863e-17!GO:0008219;cell death;7.70271261416958e-17!GO:0016265;death;7.70271261416958e-17!GO:0019222;regulation of metabolic process;8.37413084770306e-17!GO:0044257;cellular protein catabolic process;1.20186231684788e-16!GO:0016887;ATPase activity;1.43378214221767e-16!GO:0016604;nuclear body;1.53071421628043e-16!GO:0004386;helicase activity;1.65413318956225e-16!GO:0005635;nuclear envelope;2.98548073938551e-16!GO:0006605;protein targeting;3.320677471645e-16!GO:0044455;mitochondrial membrane part;4.12807660777016e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.25823447540017e-15!GO:0006913;nucleocytoplasmic transport;2.16403565828189e-15!GO:0043285;biopolymer catabolic process;2.69368749119474e-15!GO:0051169;nuclear transport;3.02023771583057e-15!GO:0044453;nuclear membrane part;3.18056552015111e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.0493282484326e-15!GO:0042254;ribosome biogenesis and assembly;4.0493282484326e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;4.41064034950888e-15!GO:0000375;RNA splicing, via transesterification reactions;4.41064034950888e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.41064034950888e-15!GO:0031323;regulation of cellular metabolic process;8.54761889838314e-15!GO:0005761;mitochondrial ribosome;8.96686641033443e-15!GO:0000313;organellar ribosome;8.96686641033443e-15!GO:0051082;unfolded protein binding;1.31060631303633e-14!GO:0006333;chromatin assembly or disassembly;1.31507411803769e-14!GO:0003712;transcription cofactor activity;2.10070417399367e-14!GO:0031965;nuclear membrane;2.12035565030333e-14!GO:0048523;negative regulation of cellular process;3.79135695045486e-14!GO:0050657;nucleic acid transport;4.02958786526633e-14!GO:0051236;establishment of RNA localization;4.02958786526633e-14!GO:0050658;RNA transport;4.02958786526633e-14!GO:0006464;protein modification process;4.34869754031361e-14!GO:0006350;transcription;4.97489994397324e-14!GO:0000785;chromatin;5.62954041046907e-14!GO:0006403;RNA localization;6.26500571647015e-14!GO:0043687;post-translational protein modification;6.58206844930778e-14!GO:0016607;nuclear speck;1.0262610107241e-13!GO:0005643;nuclear pore;3.59405130145417e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.66413554537347e-13!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.91015071923647e-13!GO:0003677;DNA binding;3.98161063041234e-13!GO:0008026;ATP-dependent helicase activity;4.2069070168564e-13!GO:0010468;regulation of gene expression;4.39497071955284e-13!GO:0006399;tRNA metabolic process;4.87535221198998e-13!GO:0003743;translation initiation factor activity;5.93923053850765e-13!GO:0009057;macromolecule catabolic process;7.3203154914001e-13!GO:0016563;transcription activator activity;1.23357046717023e-12!GO:0005746;mitochondrial respiratory chain;1.79928817377647e-12!GO:0050789;regulation of biological process;1.84426602661111e-12!GO:0065004;protein-DNA complex assembly;2.18539016362064e-12!GO:0048519;negative regulation of biological process;2.30781124618246e-12!GO:0065002;intracellular protein transport across a membrane;3.15481722312802e-12!GO:0030163;protein catabolic process;3.71811157376121e-12!GO:0051028;mRNA transport;3.91251885389127e-12!GO:0006413;translational initiation;4.51647146585523e-12!GO:0031324;negative regulation of cellular metabolic process;4.98432111817107e-12!GO:0016564;transcription repressor activity;5.29699560391783e-12!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.70084336216829e-12!GO:0032774;RNA biosynthetic process;6.35364354694163e-12!GO:0042981;regulation of apoptosis;6.75506298833163e-12!GO:0015630;microtubule cytoskeleton;7.56416355490187e-12!GO:0006351;transcription, DNA-dependent;8.95789842020525e-12!GO:0006446;regulation of translational initiation;1.08228458382206e-11!GO:0043067;regulation of programmed cell death;1.09364263608195e-11!GO:0050136;NADH dehydrogenase (quinone) activity;1.30646776591536e-11!GO:0003954;NADH dehydrogenase activity;1.30646776591536e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.30646776591536e-11!GO:0044432;endoplasmic reticulum part;1.90179542876901e-11!GO:0048193;Golgi vesicle transport;2.90069175353902e-11!GO:0044248;cellular catabolic process;3.11778411908515e-11!GO:0017038;protein import;3.58691220488335e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.93141358622992e-11!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.35640085281545e-11!GO:0046930;pore complex;8.04452298113018e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.23100403853793e-11!GO:0005783;endoplasmic reticulum;9.67819486492399e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.64369171664819e-10!GO:0042773;ATP synthesis coupled electron transport;1.64369171664819e-10!GO:0006334;nucleosome assembly;1.64369171664819e-10!GO:0006364;rRNA processing;1.81318301989233e-10!GO:0016072;rRNA metabolic process;1.95871697767926e-10!GO:0009892;negative regulation of metabolic process;2.90159191606675e-10!GO:0048770;pigment granule;3.42209843503039e-10!GO:0042470;melanosome;3.42209843503039e-10!GO:0045449;regulation of transcription;4.13378628755867e-10!GO:0031497;chromatin assembly;4.4165628093991e-10!GO:0030964;NADH dehydrogenase complex (quinone);4.99449087633656e-10!GO:0045271;respiratory chain complex I;4.99449087633656e-10!GO:0005747;mitochondrial respiratory chain complex I;4.99449087633656e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.51177458298595e-10!GO:0004812;aminoacyl-tRNA ligase activity;8.51177458298595e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.51177458298595e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.96163564141551e-10!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.10636743725827e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.12571656229671e-09!GO:0016481;negative regulation of transcription;1.32260672926344e-09!GO:0045941;positive regulation of transcription;1.46690200210723e-09!GO:0043566;structure-specific DNA binding;1.7835991177457e-09!GO:0006355;regulation of transcription, DNA-dependent;2.23753685608919e-09!GO:0016568;chromatin modification;2.40294087365505e-09!GO:0043038;amino acid activation;2.49768504341955e-09!GO:0006418;tRNA aminoacylation for protein translation;2.49768504341955e-09!GO:0043039;tRNA aminoacylation;2.49768504341955e-09!GO:0006261;DNA-dependent DNA replication;2.63653688102377e-09!GO:0008639;small protein conjugating enzyme activity;2.84875469515782e-09!GO:0006793;phosphorus metabolic process;3.26502824791809e-09!GO:0006796;phosphate metabolic process;3.26502824791809e-09!GO:0043069;negative regulation of programmed cell death;3.37323728077695e-09!GO:0043066;negative regulation of apoptosis;3.82258118846044e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.1446522105813e-09!GO:0004842;ubiquitin-protein ligase activity;5.1137430839309e-09!GO:0006916;anti-apoptosis;5.93894143236674e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.03959941123462e-09!GO:0051246;regulation of protein metabolic process;9.57038070791702e-09!GO:0019787;small conjugating protein ligase activity;1.42918554248281e-08!GO:0008565;protein transporter activity;1.47659079408755e-08!GO:0005789;endoplasmic reticulum membrane;1.91912608170881e-08!GO:0005813;centrosome;2.17017247933707e-08!GO:0045893;positive regulation of transcription, DNA-dependent;2.49049248985553e-08!GO:0005794;Golgi apparatus;2.63648806417628e-08!GO:0051170;nuclear import;3.34979491470712e-08!GO:0051186;cofactor metabolic process;3.55409056775398e-08!GO:0006888;ER to Golgi vesicle-mediated transport;4.7148993506411e-08!GO:0006606;protein import into nucleus;4.84204190655389e-08!GO:0003697;single-stranded DNA binding;5.09045132537908e-08!GO:0045786;negative regulation of progression through cell cycle;5.91753659318223e-08!GO:0003702;RNA polymerase II transcription factor activity;5.97395070047139e-08!GO:0000775;chromosome, pericentric region;7.20582075560455e-08!GO:0016881;acid-amino acid ligase activity;7.49264715134428e-08!GO:0005815;microtubule organizing center;8.33127213073547e-08!GO:0005819;spindle;8.8651150304285e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.09552377211797e-07!GO:0003713;transcription coactivator activity;1.09619840642652e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.10506108038727e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.12952777467021e-07!GO:0006732;coenzyme metabolic process;1.22276506770659e-07!GO:0048522;positive regulation of cellular process;1.28023579398454e-07!GO:0006461;protein complex assembly;1.96075471945989e-07!GO:0005667;transcription factor complex;1.97475016752874e-07!GO:0065007;biological regulation;2.17220537206897e-07!GO:0016310;phosphorylation;2.4928188528182e-07!GO:0003714;transcription corepressor activity;2.91369258069791e-07!GO:0009259;ribonucleotide metabolic process;3.2366979027453e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.07823306954716e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.20446429805276e-07!GO:0051168;nuclear export;5.12561501708303e-07!GO:0006163;purine nucleotide metabolic process;5.70122945793094e-07!GO:0016192;vesicle-mediated transport;6.06291688445797e-07!GO:0051329;interphase of mitotic cell cycle;6.92791316243278e-07!GO:0009055;electron carrier activity;6.99863132549509e-07!GO:0051325;interphase;7.35353035272998e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.53257222623508e-07!GO:0006164;purine nucleotide biosynthetic process;9.35826538837815e-07!GO:0045892;negative regulation of transcription, DNA-dependent;1.00200672742815e-06!GO:0016363;nuclear matrix;1.0067217212017e-06!GO:0000245;spliceosome assembly;1.11204601013909e-06!GO:0019829;cation-transporting ATPase activity;1.35670688358871e-06!GO:0000075;cell cycle checkpoint;1.36002436175364e-06!GO:0006310;DNA recombination;1.45224626276373e-06!GO:0016779;nucleotidyltransferase activity;1.74692484058094e-06!GO:0004298;threonine endopeptidase activity;1.74720791070221e-06!GO:0006402;mRNA catabolic process;1.84405306217712e-06!GO:0005657;replication fork;1.96750452319991e-06!GO:0009260;ribonucleotide biosynthetic process;2.12515639288426e-06!GO:0032446;protein modification by small protein conjugation;2.16046162106096e-06!GO:0007051;spindle organization and biogenesis;2.19064366676172e-06!GO:0015986;ATP synthesis coupled proton transport;2.49204065336982e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.49204065336982e-06!GO:0003682;chromatin binding;2.49846670749181e-06!GO:0019899;enzyme binding;2.85392563556259e-06!GO:0005793;ER-Golgi intermediate compartment;3.21012344607224e-06!GO:0007017;microtubule-based process;3.42524624755127e-06!GO:0009150;purine ribonucleotide metabolic process;3.48395555892026e-06!GO:0006401;RNA catabolic process;3.9265577847268e-06!GO:0003724;RNA helicase activity;4.05086672272415e-06!GO:0007010;cytoskeleton organization and biogenesis;4.18311309507669e-06!GO:0006417;regulation of translation;4.24624244853285e-06!GO:0015078;hydrogen ion transmembrane transporter activity;4.31831190189487e-06!GO:0016567;protein ubiquitination;4.31831190189487e-06!GO:0006302;double-strand break repair;4.35130499982684e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.58846407636173e-06!GO:0009893;positive regulation of metabolic process;4.64725152285679e-06!GO:0000786;nucleosome;4.697415475376e-06!GO:0006613;cotranslational protein targeting to membrane;5.05788239538709e-06!GO:0003690;double-stranded DNA binding;5.34651852650853e-06!GO:0051188;cofactor biosynthetic process;5.65196709049652e-06!GO:0009152;purine ribonucleotide biosynthetic process;5.84811779345348e-06!GO:0007005;mitochondrion organization and biogenesis;6.54293702719417e-06!GO:0016740;transferase activity;6.65826876341907e-06!GO:0045259;proton-transporting ATP synthase complex;7.00152939107525e-06!GO:0030120;vesicle coat;7.10248225725769e-06!GO:0030662;coated vesicle membrane;7.10248225725769e-06!GO:0048475;coated membrane;9.68177494075407e-06!GO:0030117;membrane coat;9.68177494075407e-06!GO:0031325;positive regulation of cellular metabolic process;1.04690233074679e-05!GO:0009060;aerobic respiration;1.05666047994546e-05!GO:0008094;DNA-dependent ATPase activity;1.27191535455966e-05!GO:0007243;protein kinase cascade;1.3655244042299e-05!GO:0007059;chromosome segregation;1.51752779345638e-05!GO:0009108;coenzyme biosynthetic process;1.76034672469431e-05!GO:0009142;nucleoside triphosphate biosynthetic process;2.07151110915785e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.07151110915785e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.07316623919025e-05!GO:0015399;primary active transmembrane transporter activity;2.07316623919025e-05!GO:0006754;ATP biosynthetic process;2.18936831563512e-05!GO:0006753;nucleoside phosphate metabolic process;2.18936831563512e-05!GO:0000776;kinetochore;2.26893736870888e-05!GO:0006414;translational elongation;2.30726723149257e-05!GO:0009056;catabolic process;2.34289059946527e-05!GO:0009199;ribonucleoside triphosphate metabolic process;2.34310043937618e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.60854079792646e-05!GO:0009141;nucleoside triphosphate metabolic process;2.70351639874907e-05!GO:0006752;group transfer coenzyme metabolic process;3.24005982278883e-05!GO:0005874;microtubule;3.40126149189103e-05!GO:0046034;ATP metabolic process;3.46369341155198e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.52132735724161e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.52132735724161e-05!GO:0051427;hormone receptor binding;3.52132735724161e-05!GO:0045333;cellular respiration;3.55537017923641e-05!GO:0051789;response to protein stimulus;3.78809774569213e-05!GO:0006986;response to unfolded protein;3.78809774569213e-05!GO:0008033;tRNA processing;3.78809774569213e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.86558007785057e-05!GO:0009144;purine nucleoside triphosphate metabolic process;3.86558007785057e-05!GO:0003678;DNA helicase activity;4.07252080250384e-05!GO:0016787;hydrolase activity;4.25333122129836e-05!GO:0005762;mitochondrial large ribosomal subunit;4.32307317725348e-05!GO:0000315;organellar large ribosomal subunit;4.32307317725348e-05!GO:0031326;regulation of cellular biosynthetic process;5.1742159333315e-05!GO:0048518;positive regulation of biological process;5.42552817768377e-05!GO:0005768;endosome;5.51833454955081e-05!GO:0043021;ribonucleoprotein binding;5.58520139356959e-05!GO:0004527;exonuclease activity;5.83182302548076e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.32027970947235e-05!GO:0035257;nuclear hormone receptor binding;7.0282493239279e-05!GO:0016741;transferase activity, transferring one-carbon groups;7.05114445333617e-05!GO:0031072;heat shock protein binding;7.23010514780718e-05!GO:0003684;damaged DNA binding;7.92579305898404e-05!GO:0006099;tricarboxylic acid cycle;8.24384552592185e-05!GO:0046356;acetyl-CoA catabolic process;8.24384552592185e-05!GO:0006612;protein targeting to membrane;8.360350231486e-05!GO:0043623;cellular protein complex assembly;8.85129357212661e-05!GO:0007088;regulation of mitosis;9.07438558517186e-05!GO:0003899;DNA-directed RNA polymerase activity;9.28402549077242e-05!GO:0004674;protein serine/threonine kinase activity;9.61294527115024e-05!GO:0008168;methyltransferase activity;9.92421926094219e-05!GO:0048468;cell development;0.000102433144993604!GO:0008186;RNA-dependent ATPase activity;0.000102433144993604!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000114646270611579!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000117741729747146!GO:0003729;mRNA binding;0.000121880038371735!GO:0044452;nucleolar part;0.000122944942905331!GO:0006084;acetyl-CoA metabolic process;0.000124647975741491!GO:0000049;tRNA binding;0.00014659143957331!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000147663734619771!GO:0051052;regulation of DNA metabolic process;0.000155666990511217!GO:0005048;signal sequence binding;0.000162195559789055!GO:0000151;ubiquitin ligase complex;0.000162956571595121!GO:0005798;Golgi-associated vesicle;0.000166164485599239!GO:0000314;organellar small ribosomal subunit;0.000174554446109142!GO:0005763;mitochondrial small ribosomal subunit;0.000174554446109142!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000176065985599208!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000233516567480411!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000248041928960969!GO:0043065;positive regulation of apoptosis;0.000271433040349675!GO:0016251;general RNA polymerase II transcription factor activity;0.00027540909394874!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00029470139366581!GO:0004004;ATP-dependent RNA helicase activity;0.000319642457432257!GO:0006405;RNA export from nucleus;0.000320793940711206!GO:0043068;positive regulation of programmed cell death;0.000322511300684019!GO:0005788;endoplasmic reticulum lumen;0.000339897910535496!GO:0003924;GTPase activity;0.000340526685660685!GO:0006383;transcription from RNA polymerase III promoter;0.000340819699314492!GO:0030867;rough endoplasmic reticulum membrane;0.000354950215795822!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0003598052497509!GO:0005525;GTP binding;0.000362613902047764!GO:0008654;phospholipid biosynthetic process;0.000369570110501988!GO:0005770;late endosome;0.000396015358683785!GO:0043492;ATPase activity, coupled to movement of substances;0.000433515925480215!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000454393905804726!GO:0048471;perinuclear region of cytoplasm;0.000470307615059078!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.000480659975699113!GO:0006891;intra-Golgi vesicle-mediated transport;0.000559373877193325!GO:0009889;regulation of biosynthetic process;0.000577911020849459!GO:0009109;coenzyme catabolic process;0.000595996266511761!GO:0043681;protein import into mitochondrion;0.00065665155304545!GO:0048500;signal recognition particle;0.000681682970188132!GO:0045454;cell redox homeostasis;0.000681716263864401!GO:0044431;Golgi apparatus part;0.000713405539059968!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00071976528343249!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000720591646488393!GO:0051252;regulation of RNA metabolic process;0.000769964818917445!GO:0051087;chaperone binding;0.00079397915260589!GO:0008270;zinc ion binding;0.000797512848307324!GO:0007093;mitotic cell cycle checkpoint;0.000833955225610823!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000847785583676187!GO:0042802;identical protein binding;0.000880075834810773!GO:0000082;G1/S transition of mitotic cell cycle;0.000921635183509926!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000985540183269506!GO:0004518;nuclease activity;0.000989840924975823!GO:0005637;nuclear inner membrane;0.000996339485600543!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.000997065902059119!GO:0008022;protein C-terminus binding;0.000999954013894861!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00101271104578928!GO:0008139;nuclear localization sequence binding;0.00113831761998132!GO:0030433;ER-associated protein catabolic process;0.00122461926954768!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00122461926954768!GO:0006520;amino acid metabolic process;0.00122840396562233!GO:0030134;ER to Golgi transport vesicle;0.00125354253288262!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00128563383165438!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00131280337254735!GO:0016853;isomerase activity;0.00131282604124965!GO:0007006;mitochondrial membrane organization and biogenesis;0.00133649468538986!GO:0065009;regulation of a molecular function;0.00134754458235909!GO:0007052;mitotic spindle organization and biogenesis;0.00136631359499561!GO:0016859;cis-trans isomerase activity;0.00137888788971116!GO:0006289;nucleotide-excision repair;0.00141292628968673!GO:0030384;phosphoinositide metabolic process;0.00142179550651209!GO:0006626;protein targeting to mitochondrion;0.00157235739504077!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00158199075316881!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00158199075316881!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00158199075316881!GO:0006352;transcription initiation;0.00162955763586636!GO:0032259;methylation;0.00167300712410739!GO:0033673;negative regulation of kinase activity;0.00167753907808448!GO:0006469;negative regulation of protein kinase activity;0.00167753907808448!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00170920949266328!GO:0030127;COPII vesicle coat;0.00183428584534963!GO:0012507;ER to Golgi transport vesicle membrane;0.00183428584534963!GO:0005885;Arp2/3 protein complex;0.0018911025070357!GO:0031982;vesicle;0.00198332309411054!GO:0007346;regulation of progression through mitotic cell cycle;0.00198838102028227!GO:0006839;mitochondrial transport;0.00206431358533608!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00207281334893507!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00207702270660478!GO:0045047;protein targeting to ER;0.00207702270660478!GO:0042770;DNA damage response, signal transduction;0.00215060095293809!GO:0006611;protein export from nucleus;0.00221872514103192!GO:0008312;7S RNA binding;0.0022288601633081!GO:0000059;protein import into nucleus, docking;0.00225417304680284!GO:0032508;DNA duplex unwinding;0.00231322195038005!GO:0032392;DNA geometric change;0.00231322195038005!GO:0051348;negative regulation of transferase activity;0.00239713820810021!GO:0006275;regulation of DNA replication;0.00260221171250546!GO:0016584;nucleosome positioning;0.00280072164705701!GO:0032200;telomere organization and biogenesis;0.00295480046242353!GO:0000723;telomere maintenance;0.00295480046242353!GO:0031124;mRNA 3'-end processing;0.00298723301141288!GO:0005876;spindle microtubule;0.0030715673824531!GO:0046966;thyroid hormone receptor binding;0.00314916399793286!GO:0051920;peroxiredoxin activity;0.00316941267623592!GO:0003746;translation elongation factor activity;0.00316941267623592!GO:0030663;COPI coated vesicle membrane;0.0031893876755752!GO:0030126;COPI vesicle coat;0.0031893876755752!GO:0030137;COPI-coated vesicle;0.00325608541116518!GO:0031123;RNA 3'-end processing;0.00327233052766125!GO:0006917;induction of apoptosis;0.0034269237880404!GO:0046489;phosphoinositide biosynthetic process;0.00351118342796935!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00358047257547714!GO:0015631;tubulin binding;0.00359613750270254!GO:0009117;nucleotide metabolic process;0.00359790868560538!GO:0032561;guanyl ribonucleotide binding;0.00363210552678782!GO:0019001;guanyl nucleotide binding;0.00363210552678782!GO:0005684;U2-dependent spliceosome;0.00377501365998102!GO:0012502;induction of programmed cell death;0.00397895204991009!GO:0031570;DNA integrity checkpoint;0.0039807280267242!GO:0046983;protein dimerization activity;0.0039807280267242!GO:0007050;cell cycle arrest;0.00409770471136766!GO:0006268;DNA unwinding during replication;0.00432107161674998!GO:0030658;transport vesicle membrane;0.00432668229863721!GO:0000287;magnesium ion binding;0.00437506864619635!GO:0045185;maintenance of protein localization;0.00442917838196782!GO:0000922;spindle pole;0.00462020031744334!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00482454486151185!GO:0019783;small conjugating protein-specific protease activity;0.00495923731629601!GO:0022415;viral reproductive process;0.00521133371227717!GO:0000819;sister chromatid segregation;0.00550520682453107!GO:0006650;glycerophospholipid metabolic process;0.00559602491435503!GO:0000096;sulfur amino acid metabolic process;0.00560741022765426!GO:0030880;RNA polymerase complex;0.00561382133507369!GO:0051187;cofactor catabolic process;0.00577852443780816!GO:0031410;cytoplasmic vesicle;0.00591088323102151!GO:0044440;endosomal part;0.00599387519592387!GO:0010008;endosome membrane;0.00599387519592387!GO:0004843;ubiquitin-specific protease activity;0.00599635053384477!GO:0006950;response to stress;0.00622365486747219!GO:0031988;membrane-bound vesicle;0.00633129020025691!GO:0030521;androgen receptor signaling pathway;0.00669799890713132!GO:0051053;negative regulation of DNA metabolic process;0.00669799890713132!GO:0019843;rRNA binding;0.00681648507075644!GO:0003711;transcription elongation regulator activity;0.0072397719047523!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00769876294029769!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00769876294029769!GO:0006284;base-excision repair;0.00773097319930073!GO:0031252;leading edge;0.00776949503107835!GO:0000725;recombinational repair;0.00776949503107835!GO:0000724;double-strand break repair via homologous recombination;0.00776949503107835!GO:0000077;DNA damage checkpoint;0.00795027515366653!GO:0045045;secretory pathway;0.0080195007320658!GO:0004532;exoribonuclease activity;0.00804599510002976!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00804599510002976!GO:0032507;maintenance of cellular protein localization;0.00812044357257364!GO:0004221;ubiquitin thiolesterase activity;0.00812044357257364!GO:0005791;rough endoplasmic reticulum;0.00821287623735482!GO:0046914;transition metal ion binding;0.00828978871969068!GO:0000097;sulfur amino acid biosynthetic process;0.00845379422855277!GO:0030036;actin cytoskeleton organization and biogenesis;0.0085001196849166!GO:0051539;4 iron, 4 sulfur cluster binding;0.00852876537529136!GO:0040029;regulation of gene expression, epigenetic;0.00852876537529136!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0085480900770627!GO:0000428;DNA-directed RNA polymerase complex;0.0085480900770627!GO:0043488;regulation of mRNA stability;0.0085480900770627!GO:0043487;regulation of RNA stability;0.0085480900770627!GO:0000070;mitotic sister chromatid segregation;0.00873911668464543!GO:0000139;Golgi membrane;0.00894591177743581!GO:0051223;regulation of protein transport;0.00899710494810059!GO:0000726;non-recombinational repair;0.00908034885223007!GO:0000209;protein polyubiquitination;0.0091791031982139!GO:0019752;carboxylic acid metabolic process;0.00919189547462325!GO:0043414;biopolymer methylation;0.00925623332709731!GO:0016790;thiolester hydrolase activity;0.00925623332709731!GO:0016272;prefoldin complex;0.00935210453805537!GO:0000792;heterochromatin;0.00935210453805537!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.00959974167471618!GO:0005669;transcription factor TFIID complex;0.00981064410510243!GO:0016311;dephosphorylation;0.00981735816743246!GO:0043022;ribosome binding;0.00998307170854424!GO:0003725;double-stranded RNA binding;0.0100636217305983!GO:0031902;late endosome membrane;0.010505298072863!GO:0006082;organic acid metabolic process;0.0108895640562954!GO:0006818;hydrogen transport;0.0109574817979325!GO:0030660;Golgi-associated vesicle membrane;0.0111112265273503!GO:0006406;mRNA export from nucleus;0.0111615854159843!GO:0005832;chaperonin-containing T-complex;0.0111992170397585!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.011262267472631!GO:0051258;protein polymerization;0.0113104872573087!GO:0015992;proton transport;0.0116419099969017!GO:0051235;maintenance of localization;0.011832158691489!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0120134283765905!GO:0006376;mRNA splice site selection;0.0121384990281549!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0121384990281549!GO:0046822;regulation of nucleocytoplasmic transport;0.0123652176361707!GO:0004003;ATP-dependent DNA helicase activity;0.0126210267678736!GO:0009451;RNA modification;0.0126705441165945!GO:0048487;beta-tubulin binding;0.0128779813480731!GO:0006984;ER-nuclear signaling pathway;0.012954526425487!GO:0006400;tRNA modification;0.013336883298515!GO:0046474;glycerophospholipid biosynthetic process;0.0133713508700013!GO:0006595;polyamine metabolic process;0.013425642241543!GO:0043549;regulation of kinase activity;0.013425642241543!GO:0006378;mRNA polyadenylation;0.0137314352853414!GO:0006730;one-carbon compound metabolic process;0.0137690500495709!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0137690500495709!GO:0047485;protein N-terminus binding;0.0137696112439975!GO:0051338;regulation of transferase activity;0.0139018528948576!GO:0006144;purine base metabolic process;0.0139018528948576!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0140774594618201!GO:0030968;unfolded protein response;0.0141019422151044!GO:0043596;nuclear replication fork;0.014251543697527!GO:0006338;chromatin remodeling;0.0146297152728512!GO:0008408;3'-5' exonuclease activity;0.0146640176141715!GO:0008652;amino acid biosynthetic process;0.0146832250981676!GO:0051651;maintenance of cellular localization;0.0147868678650165!GO:0000339;RNA cap binding;0.0148486285243335!GO:0030176;integral to endoplasmic reticulum membrane;0.0151623587642883!GO:0006519;amino acid and derivative metabolic process;0.016063431684545!GO:0035258;steroid hormone receptor binding;0.016262829716936!GO:0030518;steroid hormone receptor signaling pathway;0.0167160055629463!GO:0008276;protein methyltransferase activity;0.0170135073302296!GO:0009112;nucleobase metabolic process;0.0170674510298446!GO:0006607;NLS-bearing substrate import into nucleus;0.0170674510298446!GO:0016197;endosome transport;0.0170674510298446!GO:0016023;cytoplasmic membrane-bound vesicle;0.0170674510298446!GO:0042393;histone binding;0.0174492485085023!GO:0000910;cytokinesis;0.0174915123407904!GO:0030833;regulation of actin filament polymerization;0.0178182573650007!GO:0006270;DNA replication initiation;0.0178858516347013!GO:0004576;oligosaccharyl transferase activity;0.0182754510638646!GO:0031625;ubiquitin protein ligase binding;0.0184769067591224!GO:0000178;exosome (RNase complex);0.0189433408160436!GO:0043130;ubiquitin binding;0.0190898499987066!GO:0032182;small conjugating protein binding;0.0190898499987066!GO:0016301;kinase activity;0.0192149276765935!GO:0004748;ribonucleoside-diphosphate reductase activity;0.019361233796331!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.019361233796331!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0193902681090196!GO:0015002;heme-copper terminal oxidase activity;0.0193902681090196!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0193902681090196!GO:0004129;cytochrome-c oxidase activity;0.0193902681090196!GO:0046467;membrane lipid biosynthetic process;0.0195083292155743!GO:0033116;ER-Golgi intermediate compartment membrane;0.0196503695620059!GO:0045859;regulation of protein kinase activity;0.0201904798630007!GO:0051540;metal cluster binding;0.0204293431973858!GO:0051536;iron-sulfur cluster binding;0.0204293431973858!GO:0000738;DNA catabolic process, exonucleolytic;0.0208480804928035!GO:0000781;chromosome, telomeric region;0.0209940482000484!GO:0008538;proteasome activator activity;0.021363532128781!GO:0007569;cell aging;0.0214777604098139!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.021477775706709!GO:0003727;single-stranded RNA binding;0.0216561009487147!GO:0000228;nuclear chromosome;0.021727025790976!GO:0005758;mitochondrial intermembrane space;0.0228112516212984!GO:0006695;cholesterol biosynthetic process;0.0234480342169568!GO:0016126;sterol biosynthetic process;0.0236183681373028!GO:0005875;microtubule associated complex;0.0241567828686892!GO:0008320;protein transmembrane transporter activity;0.0252774692595256!GO:0031647;regulation of protein stability;0.0259217589327794!GO:0005769;early endosome;0.0260868696436732!GO:0007018;microtubule-based movement;0.0266333922355319!GO:0008287;protein serine/threonine phosphatase complex;0.0269463671377947!GO:0008017;microtubule binding;0.0270871415705305!GO:0030496;midbody;0.0274573787513742!GO:0008156;negative regulation of DNA replication;0.0277377650277824!GO:0022884;macromolecule transmembrane transporter activity;0.0279905505819613!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0279905505819613!GO:0009967;positive regulation of signal transduction;0.0281863205353353!GO:0045792;negative regulation of cell size;0.0282179893775566!GO:0008250;oligosaccharyl transferase complex;0.0286634139539084!GO:0005773;vacuole;0.0291847056199276!GO:0030041;actin filament polymerization;0.0294882492783474!GO:0006091;generation of precursor metabolites and energy;0.0303870415733487!GO:0031970;organelle envelope lumen;0.0304639532331643!GO:0043631;RNA polyadenylation;0.0310170845177648!GO:0008632;apoptotic program;0.0312163713874974!GO:0051656;establishment of organelle localization;0.0318693172889026!GO:0019976;interleukin-2 binding;0.0318693172889026!GO:0004911;interleukin-2 receptor activity;0.0318693172889026!GO:0000323;lytic vacuole;0.0320259775759967!GO:0005764;lysosome;0.0320259775759967!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0320259775759967!GO:0008299;isoprenoid biosynthetic process;0.0320259775759967!GO:0004721;phosphoprotein phosphatase activity;0.0320833977968597!GO:0032940;secretion by cell;0.0324903197844493!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.033461740448294!GO:0009165;nucleotide biosynthetic process;0.0338415937477549!GO:0051059;NF-kappaB binding;0.0348303350916567!GO:0032039;integrator complex;0.0353630486955093!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0357990231252203!GO:0032984;macromolecular complex disassembly;0.0361509199990405!GO:0004659;prenyltransferase activity;0.0362878397831955!GO:0043284;biopolymer biosynthetic process;0.0365809223536263!GO:0008097;5S rRNA binding;0.0367187071120241!GO:0030308;negative regulation of cell growth;0.0367187071120241!GO:0031968;organelle outer membrane;0.0379504804032395!GO:0012506;vesicle membrane;0.0383434805278699!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0384472602830663!GO:0044450;microtubule organizing center part;0.0384513992778895!GO:0000152;nuclear ubiquitin ligase complex;0.0386627688233649!GO:0043407;negative regulation of MAP kinase activity;0.0386627688233649!GO:0033239;negative regulation of amine metabolic process;0.0388816598811609!GO:0045763;negative regulation of amino acid metabolic process;0.0388816598811609!GO:0001933;negative regulation of protein amino acid phosphorylation;0.0388816598811609!GO:0042026;protein refolding;0.0392673024464888!GO:0006505;GPI anchor metabolic process;0.0393436310247718!GO:0018196;peptidyl-asparagine modification;0.0403062717407232!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0403062717407232!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0403854451968124!GO:0022890;inorganic cation transmembrane transporter activity;0.0406594439369424!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0406594439369424!GO:0007034;vacuolar transport;0.0412263980935604!GO:0050662;coenzyme binding;0.0414435048013516!GO:0030133;transport vesicle;0.0414650668293037!GO:0016791;phosphoric monoester hydrolase activity;0.0414650668293037!GO:0030029;actin filament-based process;0.0420327552881296!GO:0006434;seryl-tRNA aminoacylation;0.0420478228149548!GO:0004828;serine-tRNA ligase activity;0.0420478228149548!GO:0046426;negative regulation of JAK-STAT cascade;0.042070729399452!GO:0000175;3'-5'-exoribonuclease activity;0.0421693271448365!GO:0031529;ruffle organization and biogenesis;0.0424737202466999!GO:0005663;DNA replication factor C complex;0.0427155837895172!GO:0019900;kinase binding;0.0427155837895172!GO:0019079;viral genome replication;0.0427631515141736!GO:0008283;cell proliferation;0.042877750268721!GO:0019867;outer membrane;0.0429738152227934!GO:0016788;hydrolase activity, acting on ester bonds;0.0433235163923552!GO:0001558;regulation of cell growth;0.044134208021664!GO:0005652;nuclear lamina;0.0443098632120417!GO:0043601;nuclear replisome;0.0446667338704964!GO:0030894;replisome;0.0446667338704964!GO:0022406;membrane docking;0.0446667338704964!GO:0048278;vesicle docking;0.0446667338704964!GO:0016579;protein deubiquitination;0.044776618741059!GO:0008234;cysteine-type peptidase activity;0.0448604012446426!GO:0005784;translocon complex;0.0449416659044012!GO:0045746;negative regulation of Notch signaling pathway;0.0449416659044012!GO:0046488;phosphatidylinositol metabolic process;0.045307070150757!GO:0045086;positive regulation of interleukin-2 biosynthetic process;0.0455322489456527!GO:0006518;peptide metabolic process;0.0468647328883714!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0469415133178042!GO:0008361;regulation of cell size;0.0470669155500676!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0471912429313217!GO:0005869;dynactin complex;0.0474180009695105!GO:0000086;G2/M transition of mitotic cell cycle;0.0477940857075908!GO:0008629;induction of apoptosis by intracellular signals;0.0479965928291591!GO:0030258;lipid modification;0.0484247801786469!GO:0003747;translation release factor activity;0.048510768644236!GO:0008079;translation termination factor activity;0.048510768644236!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0486161344055471!GO:0016407;acetyltransferase activity;0.048766996619668!GO:0031577;spindle checkpoint;0.0490458833120029!GO:0006506;GPI anchor biosynthetic process;0.0490598899627256!GO:0019058;viral infectious cycle;0.0496633345945436
 |sample_id=10452
 |sample_note=
@@ Line 76: / Line 98: @@
 |sample_tissue=blood
 |top_motifs=CREB1:3.083618459;ATF4:2.74827858018;FOXP1:2.52944318776;NFKB1_REL_RELA:2.49962292384;HOX{A6,A7,B6,B7}:2.47356792018;NFY{A,B,C}:2.15569353908;HOXA9_MEIS1:2.0217751134;NKX2-1,4:1.89413929855;ZNF148:1.77991003939;ATF5_CREB3:1.69414855635;GFI1:1.61019488177;FOXP3:1.57375993062;MYB:1.54427038926;POU2F1..3:1.54287010992;TLX2:1.53985518037;STAT2,4,6:1.53971945646;ELK1,4_GABP{A,B1}:1.5328490176;HSF1,2:1.46960708415;AIRE:1.45805702013;RORA:1.41555459796;E2F1..5:1.37188586804;JUN:1.30894555988;ELF1,2,4:1.26601079275;YY1:1.25260428194;NRF1:1.22591197016;ATF6:1.2219961485;FOXN1:1.20439525652;NFIX:1.17923227322;RBPJ:1.14862063075;AHR_ARNT_ARNT2:1.10981262341;TEF:1.09070913281;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.08681608833;POU3F1..4:1.02978838599;STAT5{A,B}:0.950313335161;PAX4:0.90966873272;POU1F1:0.8930632576;CUX2:0.889852698608;TGIF1:0.848060912617;PBX1:0.840846436749;NANOG:0.815400870449;ZFP161:0.778763378635;TFDP1:0.764114515026;ZBTB16:0.753002508877;BPTF:0.734549434748;RFX2..5_RFXANK_RFXAP:0.727076616628;PAX3,7:0.698376614319;PAX8:0.695448083835;CRX:0.683470330585;SOX{8,9,10}:0.639787279965;HIF1A:0.638342764926;BREu{core}:0.628930509494;EVI1:0.606664483527;PITX1..3:0.572109793929;DBP:0.554298053581;CDX1,2,4:0.542947124243;TP53:0.514296460163;ADNP_IRX_SIX_ZHX:0.507558366428;MYOD1:0.48543945376;ZNF143:0.463123720391;STAT1,3:0.462535025547;RUNX1..3:0.450830047991;IRF1,2:0.426481589706;ONECUT1,2:0.415615178316;HES1:0.36126106967;ATF2:0.321850548723;RFX1:0.298037846426;SOX17:0.296965303624;ESRRA:0.248978261319;PDX1:0.232902116716;PAX2:0.222586071655;SRF:0.193639613573;FOXM1:0.190873193696;EGR1..3:0.190594275719;FOXD3:0.128801553682;LEF1_TCF7_TCF7L1,2:0.114628522643;SPI1:0.111794433495;RXR{A,B,G}:0.110259695647;XBP1:0.0900973447806;CEBPA,B_DDIT3:0.0780040297958;MAFB:0.0746726029257;FOSL2:0.0641230398196;FOS_FOS{B,L1}_JUN{B,D}:0.0595516851167;POU5F1:0.0594573689485;bHLH_family:0.0437765900065;SOX5:0.0367692554351;NKX6-1,2:0.0247875472331;GFI1B:0.0136761939083;HOX{A4,D4}:0.0133805406788;NFE2L1:-0.0202030675472;NFATC1..3:-0.0426376953252;FOXQ1:-0.0830209723017;NFE2:-0.0856095647989;SOX2:-0.094855757441;MTE{core}:-0.105274112376;MED-1{core}:-0.10930106867;MYFfamily:-0.160352176636;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.165459539019;PAX1,9:-0.174665032837;GATA6:-0.180236920851;ZNF384:-0.196345816061;ETS1,2:-0.20849841787;NFIL3:-0.228272966259;BACH2:-0.228771488878;POU6F1:-0.236699350879;IRF7:-0.257587408019;SPIB:-0.283373595432;PRRX1,2:-0.284896638996;SREBF1,2:-0.308677337017;GCM1,2:-0.332921765594;NKX3-1:-0.335226908358;HNF1A:-0.337133185426;MEF2{A,B,C,D}:-0.366418620208;ZIC1..3:-0.388119385731;TBP:-0.389313722869;PATZ1:-0.39579698825;IKZF2:-0.409530819415;HBP1_HMGB_SSRP1_UBTF:-0.419174751442;FOXA2:-0.449342572831;HNF4A_NR2F1,2:-0.493659915435;HLF:-0.512106211156;GZF1:-0.512481813093;FOX{F1,F2,J1}:-0.536861571853;DMAP1_NCOR{1,2}_SMARC:-0.547911952082;TFAP2{A,C}:-0.558025697883;MZF1:-0.56025028689;RREB1:-0.563235415353;HIC1:-0.568066573632;ESR1:-0.572524531612;TFAP2B:-0.60762799094;LHX3,4:-0.615732019907;MYBL2:-0.680450159705;LMO2:-0.682066436375;SNAI1..3:-0.683802525766;NFE2L2:-0.687868271809;FOX{D1,D2}:-0.712248257406;OCT4_SOX2{dimer}:-0.715023618583;VSX1,2:-0.735166718505;REST:-0.739941410875;NR6A1:-0.740681925105;IKZF1:-0.779191321291;ZEB1:-0.785426520855;HMGA1,2:-0.785470765126;NKX3-2:-0.791799734429;TBX4,5:-0.800212419254;ALX1:-0.858908432416;FOXL1:-0.877591317738;ARID5B:-0.880106999294;AR:-0.898568361879;TOPORS:-0.914217577166;PAX5:-0.974846096541;NKX2-3_NKX2-5:-0.986880019163;GTF2A1,2:-0.994715210193;NR5A1,2:-1.00113103401;UFEwm:-1.00855718387;PAX6:-1.0214543671;HMX1:-1.02326608796;FOX{I1,J2}:-1.02641370303;EN1,2:-1.05161277706;GATA4:-1.06188031279;CDC5L:-1.12764306629;TEAD1:-1.17083898988;NANOG{mouse}:-1.17855054234;EBF1:-1.2007648217;EP300:-1.24202642857;XCPE1{core}:-1.24389301804;HOX{A5,B5}:-1.25671521743;MAZ:-1.26794815022;GTF2I:-1.27026106537;MTF1:-1.30610702832;NHLH1,2:-1.32464789871;ZNF423:-1.35007742421;PRDM1:-1.35789714258;RXRA_VDR{dimer}:-1.37491486716;NR1H4:-1.41143653311;FOXO1,3,4:-1.45525780006;SP1:-1.49846772334;ZBTB6:-1.54480421183;KLF4:-1.553822065;TAL1_TCF{3,4,12}:-1.55996363159;NKX2-2,8:-1.56723964952;TFAP4:-1.65301589783;SMAD1..7,9:-1.68340872866;HAND1,2:-1.77230158911;TFCP2:-1.80891679295;TLX1..3_NFIC{dimer}:-1.85283405681;GLI1..3:-1.94822016337;ZNF238:-1.99709642782;ALX4:-2.02559211869;NR3C1:-2.33359405877;PPARG:-2.35138288067;T:-2.43404020877;SPZ1:-3.10465301487
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10452-106G2;search_select_hide=table117:FF:10452-106G2
 }}

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FF:10452-106G2: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 14:03, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0