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{{f5samples
{{f5samples
|id=FF:10453-106G3
|DRA_sample_Accession=CAGE@SAMD00005000
|name=cord blood derived cell line:COBL-a 24h infection
|accession_numbers=CAGE;DRX007865;DRR008737;DRZ000162;DRZ001547;DRZ011512;DRZ012897
|sample_id=10453
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000178,UBERON:0002331,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000478,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009
|rna_tube_id=106G3
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000255,CL:0000080
|rna_box=106
|rna_position=G3
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=9.7
|rna_od260/230=1.85
|rna_od260/280=2.12
|sample_cell_type=unclassifiable
|sample_cell_line=COBL-a
|sample_collaboration=Chieko Kai (University of Tokyo)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=22.65275
|rna_concentration=0.90611
|sample_note=
|profile_hcage=CNhs11050,LSID722,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000144,CL:0000255,CL:0000548,CL:0000988,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000087,UBERON:0000091,UBERON:0000178,UBERON:0000179,UBERON:0000358,UBERON:0000463,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000478,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001009,UBERON:0001062,UBERON:0002050,UBERON:0002193,UBERON:0002331,UBERON:0002390,UBERON:0002532,UBERON:0003081,UBERON:0004120,UBERON:0004535,UBERON:0005423,UBERON:0005728,UBERON:0007806,UBERON:0008780
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0000625,FF:0101035,FF:0104053
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr6:391743..391759,+!p1@IRF4!2.70!500.93!IRF4;;chr11:129245736..129245758,+!p2@BARX2!2.17!146.79!BARX2;;chr12:48276548..48276564,-!p3@VDR!2.12!132.09!VDR;;chr3:189349162..189349207,+!p2@TP63!2.11!129.12!TP63;;chr13:28494130..28494168,+!p1@PDX1!2.07!115.53!PDX1;;chr3:111314186..111314204,-!p1@ZBED2!2.00!99.84!ZBED2;;chr1:212873084..212873137,-!p2@BATF3!1.98!93.54!BATF3;;chr17:38020392..38020477,-!p1@IKZF3!1.97!93.29!IKZF3;;chr14:75988831..75988847,+!p2@BATF!1.96!91.19!BATF;;chr12:103351444..103351461,+!p1@ASCL1!1.93!84.89!ASCL1;;chr17:46703687..46703740,-!p1@HOXB9!1.92!82.17!HOXB9;;chr8:11561684..11561751,+!p1@GATA4!1.91!80.44!GATA4;;chr17:45810594..45810608,+!p1@TBX21!1.90!77.85!TBX21;;chr2:231090471..231090504,+!p2@SP140!1.88!75.13!SP140;;chr14:75988771..75988826,+!p1@BATF!1.86!93.29!BATF;;chr10:64576105..64576133,-!p1@EGR2!1.79!120.97!EGR2;;chr18:55102598..55102623,+!p1@ONECUT2!1.79!60.92!ONECUT2;;chr4:57522513..57522548,-!p4@HOPX!1.76!56.35!HOPX;;chr4:57522476..57522500,-!p7@HOPX!1.74!53.87!HOPX;;chr6:135502501..135502546,+!p1@MYB!1.72!62.03!MYB;;chr6:137815524..137815537,-!p1@OLIG3!1.69!48.07!OLIG3;;chr1:212873162..212873188,-!p3@BATF3!1.69!47.70!BATF3;;chr11:129245526..129245553,+!p1@BARX2!1.66!44.48!BARX2;;chr6:135502408..135502459,+!p2@MYB!1.61!45.47!MYB;;chr9:77112244..77112262,+!p1@RORB!1.59!42.01!RORB;;chr17:40441354..40441410,+!p2@STAT5A!1.58!37.19!STAT5A;;chr15:60884706..60884743,-!p1@RORA!1.52!159.27!RORA;;chr11:31832658..31832681,-!p1@PAX6!1.52!32.00!PAX6;;chr7:50344289..50344323,+!p1@IKZF1!1.52!31.88!IKZF1;;chr2:231090433..231090469,+!p1@SP140!1.51!31.51!SP140;;chr2:176969228..176969260,+!p1@HOXD11!1.50!30.27!HOXD11;;chr1:3569072..3569093,+!p1@TP73!1.49!29.78!TP73;;chr20:50159198..50159299,-!p1@NFATC2!1.48!42.51!NFATC2;;chr1:212873061..212873080,-!p4@BATF3!1.47!28.42!BATF3;;chr2:45168875..45168916,+!p1@SIX3!1.46!27.55!SIX3;;chr19:36204309..36204335,+!p1@ZBTB32!1.45!27.06!ZBTB32;;chr17:8027418..8027432,-!p1@HES7!1.44!26.44!HES7;;chr1:212873267..212873332,-!p1@BATF3!1.43!34.60!BATF3;;chr10:104155659..104155676,+!p4@NFKB2!1.42!31.76!NFKB2;;chr17:40440359..40440386,+!p4@STAT5A!1.42!25.58!STAT5A;;chr18:55102628..55102646,+!p2@ONECUT2!1.42!25.45!ONECUT2;;chr3:141087393..141087426,+!p3@ZBTB38!1.39!90.33!ZBTB38;;chr1:201979703..201979721,+!p2@ELF3!1.39!23.48!ELF3;;chr13:28494109..28494122,+!p2@PDX1!1.38!23.23!PDX1;;chr2:185463247..185463263,+!p1@ZNF804A!1.35!37.44!ZNF804A;;chr3:141087339..141087387,+!p2@ZBTB38!1.34!205.86!ZBTB38;;chr3:181429741..181429767,+!p2@SOX2!1.34!20.88!SOX2;;chr6:91006518..91006570,-!p1@BACH2!1.33!46.71!BACH2;;chr1:212873200..212873230,-!p5@BATF3!1.33!20.51!BATF3;;chr8:128747846..128747860,+!p15@MYC!1.33!20.39!MYC;;chr10:64576035..64576046,-!p2@EGR2!1.33!20.39!EGR2;;chr1:25291475..25291511,-!p2@RUNX3!1.30!18.78!RUNX3;;chr20:6748325..6748352,+!p1@BMP2!1.28!26.07!BMP2;;chr3:181429704..181429722,+!p1@SOX2!1.28!18.16!SOX2;;chr17:46703436..46703460,-!p7@HOXB9!1.27!17.67!HOXB9;;chr6:36355360..36355392,-!p4@ETV7!1.27!17.55!ETV7;;chr4:144435112..144435176,+!p3@SMARCA5!1.26!34.97!SMARCA5;;chr3:111314230..111314241,-!p2@ZBED2!1.26!17.18!ZBED2;;chr3:101546827..101546847,+!p2@NFKBIZ!1.25!23.72!NFKBIZ;;chr6:106546808..106546833,+!p3@PRDM1!1.25!21.13!PRDM1;;chr19:45252008..45252024,+!p2@BCL3!1.24!54.00!BCL3;;chr7:50344251..50344288,+!p3@IKZF1!1.24!16.31!IKZF1;;chr19:47523058..47523114,+!p1@NPAS1!1.22!15.57!NPAS1;;chr2:45168834..45168847,+!p2@SIX3!1.22!15.45!SIX3;;chr13:28494375..28494416,+!p4@PDX1!1.21!15.20!PDX1;;chr4:26322267..26322334,+!p3@RBPJ!1.20!35.83!RBPJ;;chr1:158978768..158978800,+!p8@IFI16!1.19!14.46!IFI16;;chr1:25256756..25256774,-!p1@RUNX3!1.16!25.08!RUNX3;;chr9:2015335..2015370,+!p1@SMARCA2!1.15!158.66!SMARCA2;;chr12:103352277..103352324,+!p2@ASCL1!1.15!13.10!ASCL1;;chr12:52445218..52445237,+!p1@NR4A1!1.14!161.25!NR4A1;;chr21:47063625..47063658,+!p1@PCBP3!1.14!55.36!PCBP3;;chr2:176969179..176969226,+!p2@HOXD11!1.14!12.85!HOXD11;;chr3:141747950..141748004,-!p7@TFDP2!1.14!12.85!TFDP2;;chr6:135502472..135502489,+!p3@MYB!1.14!12.85!MYB;;chr3:189348969..189349018,+!p4@TP63!1.14!12.73!TP63;;chr3:141747459..141747475,-!p1@TFDP2!1.13!103.18!TFDP2;;chr19:12203100..12203132,+!p1@ZNF788!1.12!24.47!ZNF788;;chr2:231090344..231090361,-!p3@SP110!1.12!12.11!SP110;;chr13:28494180..28494196,+!p3@PDX1!1.11!11.99!PDX1;;chr17:40440446..40440464,+!p5@STAT5A!1.11!11.86!STAT5A;;chr6:144385698..144385742,-!p2@PLAGL1!1.10!13.96!PLAGL1;;chr5:1882184..1882203,-!p4@IRX4!1.10!11.62!IRX4;;chr2:61108878..61108891,+!p5@REL!1.10!11.62!REL;;chr18:77155922..77155939,+!p1@NFATC1!1.09!31.14!NFATC1;;chr12:54393880..54393962,+!p1@HOXC9!1.08!11.00!HOXC9;;chr19:19976683..19976709,+!p1@ZNF253!1.07!48.19!ZNF253;;chr2:45168997..45169020,+!p4@SIX3!1.06!10.50!SIX3;;chr1:27023752..27023799,+!p4@ARID1A!1.05!13.47!ARID1A;;chr1:201979743..201979762,+!p1@ELF3!1.05!10.26!ELF3;;chr6:137815425..137815444,-!p2@OLIG3!1.05!10.26!OLIG3;;chr7:50348268..50348366,+!p4@IKZF1!1.05!10.26!IKZF1;;chr11:61520075..61520136,+!p1@C11orf9!1.04!21.13!C11orf9;;chr2:45168959..45168990,+!p6@SIX3!1.04!10.01!SIX3;;chr5:1882170..1882182,-!p3@IRX4!1.04!9.89!IRX4;;chr10:104154246..104154347,+!p3@NFKB2!1.03!60.92!NFKB2;;chr20:51588873..51588953,+!p1@TSHZ2!1.03!12.85!TSHZ2;;chr13:79177703..79177729,-!p2@POU4F1!1.03!9.64!POU4F1;;chr5:1883024..1883046,-!p5@IRX4!1.02!9.51!IRX4;;chr12:48276620..48276640,-!p7@VDR!1.02!9.39!VDR;;chr12:56415246..56415286,+!p2@IKZF4!1.02!9.39!IKZF4;;chr1:212782094..212782109,+!p1@ATF3!1.01!258.25!ATF3;;chr5:142780237..142780261,-!p7@NR3C1!1.01!9.14!NR3C1;;chr12:48298765..48298783,-!p2@VDR!1.00!18.91!VDR;;chr6:1389789..1389821,+!p1@FOXF2!1.00!12.60!FOXF2;;chr9:1050331..1050363,+!p1@DMRT2!1.00!9.02!DMRT2;;chr5:142780189..142780223,-!p6@NR3C1!1.00!8.90!NR3C1;;chr11:31832610..31832639,-!p5@PAX6!1.00!8.90!PAX6;;chr3:189349132..189349142,+!p7@TP63!1.00!8.90!TP63;;chr14:35873947..35873965,-!p1@NFKBIA!0.99!569.14!NFKBIA;;chr6:42419649..42419673,-!p3@TRERF1!0.99!15.57!TRERF1;;chr1:41827095..41827155,+!p1@FOXO6!0.99!12.11!FOXO6;;chr2:61108808..61108821,+!p3@REL!0.99!11.24!REL;;chr3:157824202..157824211,-!p3@SHOX2!0.99!8.77!SHOX2;;chr12:19593515..19593573,+!p9@AEBP2!0.98!11.74!AEBP2;;chr11:31832581..31832601,-!p7@PAX6!0.98!8.65!PAX6;;chr6:36355431..36355466,-!p1@ETV7!0.98!8.65!ETV7;;chr6:106546834..106546850,+!p4@PRDM1!0.98!8.53!PRDM1;;chr14:75988851..75988862,+!p3@BATF!0.98!8.53!BATF;;chr20:20348740..20348757,+!p1@INSM1!0.98!8.53!INSM1;;chr2:97202480..97202499,+!p1@ARID5A!0.97!87.24!ARID5A;;chr2:145274900..145274934,-!p4@ZEB2!0.97!52.27!ZEB2;;chr5:158526917..158526932,-!p1@EBF1!0.97!21.38!EBF1;;chr4:185395590..185395627,-!p3@IRF2!0.97!10.38!IRF2;;chr12:24715376..24715432,-!p1@SOX5!0.96!10.50!SOX5;;chr17:46703528..46703549,-!p5@HOXB9!0.96!8.03!HOXB9;;chr10:104155480..104155534,+!p2@NFKB2!0.95!53.38!NFKB2;;chr2:145274981..145274994,-!p9@ZEB2!0.95!11.74!ZEB2;;chr10:8096631..8096660,+!p1@GATA3!0.95!9.76!GATA3;;chr6:91006296..91006308,-!p7@BACH2!0.95!7.91!BACH2;;chr6:31126291..31126399,+!p1@TCF19!0.94!75.25!TCF19;;chr6:106534192..106534224,+!p1@PRDM1!0.94!22.24!PRDM1;;chr6:1610293..1610310,+!p1@FOXC1!0.94!13.10!FOXC1;;chr17:70117153..70117174,+!p1@SOX9!0.93!80.44!SOX9;;chr10:104155680..104155687,+!p6@NFKB2!0.93!7.54!NFKB2;;chrY:2803415..2803468,+!p1@ZFY!0.93!7.54!ZFY;;chr7:27195867..27195893,-!p3@HOXA7!0.93!7.54!HOXA7;;chr17:46703478..46703488,-!p9@HOXB9!0.92!7.41!HOXB9;;chr16:31885093..31885165,+!p1@ZNF267!0.91!114.30!ZNF267;;chr14:35872453..35872485,-!p2@NFKBIA!0.91!18.16!NFKBIA;;chr8:60031619..60031676,-!p1@TOX!0.91!16.06!TOX;;chr8:11561453..11561466,+!p2@GATA4!0.91!7.04!GATA4;;chr19:19976714..19976729,+!p3@ZNF253!0.90!13.47!ZNF253;;chr2:61108695..61108753,+!p1@REL!0.89!48.56!REL;;chr2:157189180..157189290,-!p1@NR4A2!0.88!36.08!NR4A2;;chr4:26323870..26323885,+!p13@RBPJ!0.88!6.67!RBPJ;;chr1:92951607..92951661,-!p1@GFI1!0.88!6.67!GFI1;;chr12:48276681..48276692,-!p11@VDR!0.88!6.67!VDR;;chr5:1882993..1883003,-!p9@IRX4!0.88!6.55!IRX4;;chr17:59477403..59477414,+!p4@TBX2!0.88!6.55!TBX2;;chr10:8095593..8095625,+!p3@GATA3!0.87!7.54!GATA3;;chr8:60031682..60031710,-!p2@TOX!0.86!10.38!TOX;;chr2:192015701..192015743,-!p1@STAT4!0.86!8.77!STAT4;;chr4:26324474..26324501,+!p16@RBPJ!0.86!6.30!RBPJ;;chr17:45810816..45810838,+!p2@TBX21!0.86!6.18!TBX21;;chr19:57791917..57791937,+!p4@ZNF460!0.85!11.12!ZNF460;;chr2:61108771..61108789,+!p4@REL!0.85!9.51!REL;;chr19:13213662..13213686,-!p1@LYL1!0.85!9.14!LYL1;;chr17:42295777..42295816,-!p7@UBTF!0.85!7.41!UBTF;;chr11:129245763..129245768,+!p4@BARX2!0.85!6.05!BARX2;;chr9:117150254..117150271,-!p1@AKNA!0.84!17.05!AKNA;;chr9:2015306..2015323,+!p3@SMARCA2!0.84!16.43!SMARCA2;;chr15:76629123..76629151,+!p1@ISL2!0.84!6.67!ISL2;;chr17:40440225..40440268,+!p3@STAT5A!0.83!7.54!STAT5A;;chr2:145274998..145275012,-!p13@ZEB2!0.83!6.55!ZEB2;;chr10:124895548..124895570,+!p2@HMX3!0.83!5.68!HMX3;;chr19:21203481..21203504,+!p2@ZNF430!0.82!13.59!ZNF430;;chr7:128577972..128578047,+!p1@IRF5!0.82!9.14!IRF5;;chr11:6947720..6947812,+!p1@ZNF215!0.82!7.54!ZNF215;;chr4:57522166..57522260,-!p2@HOPX!0.82!6.55!HOPX;;chr1:3569101..3569115,+!p2@TP73!0.82!5.56!TP73;;chr6:106534230..106534254,+!p2@PRDM1!0.81!14.58!PRDM1;;chr20:2673383..2673441,+!p1@EBF4!0.81!9.02!EBF4;;chr19:57791966..57791973,+!p8@ZNF460!0.81!5.44!ZNF460;;chr4:185395633..185395651,-!p2@IRF2!0.80!8.77!IRF2;;chr2:200322654..200322707,-!p2@SATB2!0.80!8.03!SATB2;;chr10:8096772..8096787,+!p2@GATA3!0.80!6.30!GATA3;;chr3:128207349..128207386,-!p3@GATA2!0.80!5.31!GATA2;;chr8:76319876..76319926,+!p1@HNF4G!0.80!5.31!HNF4G;;chr17:46703826..46703845,-!p3@HOXB9!0.80!5.31!HOXB9;;chr6:126102254..126102289,+!p5@NCOA7!0.79!15.45!NCOA7;;chr19:21265028..21265052,+!p2@ZNF714!0.79!9.76!ZNF714;;chr12:11802932..11802949,+!p3@ETV6!0.79!9.27!ETV6;;chr17:38020557..38020572,-!p4@IKZF3!0.79!5.19!IKZF3;;chr19:12902289..12902307,+!p1@JUNB!0.78!1256.15!JUNB;;chr20:30795511..30795562,-!p1@PLAGL2!0.78!100.09!PLAGL2;;chr12:48298785..48298828,-!p1@VDR!0.78!29.04!VDR;;chr6:126102292..126102329,+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EST;;chr9:3525867..3525902,-!p3@RFX3!0.25!4.82!RFX3;;chr5:92918894..92918912,+!p2@NR2F1!0.25!4.57!NR2F1;;chr8:123793860..123793921,+!p2@ZHX2!0.25!3.71!ZHX2;;chr19:40502938..40502987,+!p1@ZNF546!0.25!3.34!ZNF546;;chrX:47341928..47342010,-!p2@ZNF41!0.25!2.47!ZNF41;;chr3:5021268..5021282,+!p4@BHLHE40!0.25!2.47!BHLHE40;;chr5:142783792..142783842,-!p5@NR3C1!0.25!2.10!NR3C1;;chr16:30621615..30621660,-!p2@ZNF689!0.25!2.10!ZNF689;;chr6:10412600..10412637,-!p1@TFAP2A!0.25!1.85!TFAP2A;;chr7:100076723..100076737,-!p3@TSC22D4!0.25!1.73!TSC22D4;;chr19:58987711..58987729,+!p2@ZNF446!0.25!1.73!ZNF446;;chr1:43148855..43148908,+!p4@YBX1!0.25!1.73!YBX1;;chr9:86593238..86593252,-!p3@HNRNPK!0.25!1.61!HNRPK;;chr14:24020938..24020988,-!p1@ZFHX2!0.25!1.48!ZFHX2;;chr19:12035937..12035969,+!p3@ZNF700,p4@ZNF763!0.25!1.36!ZNF700;;chr13:114238987..114238994,+!p2@TFDP1!0.25!1.11!TFDP1;;chr19:20748603..20748606,-!p4@ZNF737!0.25!0.99!ZNF737;;chr17:30677160..30677200,+!p1@ZNF207!0.24!228.10!ZNF207;;chr9:33290491..33290564,+!p1@NFX1!0.24!57.21!NFX1;;chr18:53255415..53255491,-!p1@TCF4!0.24!12.85!TCF4;;chr1:249132512..249132547,+!p2@ZNF672!0.24!8.77!ZNF672;;chr19:35225121..35225175,+!p1@ZNF181!0.24!8.28!ZNF181;;chr16:29818160..29818188,+!p6@MAZ!0.24!6.67!MAZ;;chr17:47492252..47492265,-!p2@PHB!0.24!5.81!PHB;;chr19:23869970..23869991,-!p1@ZNF675!0.24!5.31!ZNF675;;chr4:47916543..47916580,-!p2@NFXL1!0.24!4.45!NFXL1;;chr8:146228226..146228264,-!p2@ZNF252!0.24!2.97!ZNF252P;;chr15:90544532..90544563,+!p1@ZNF710!0.24!2.35!ZNF710;;chr3:71114115..71114126,-!p14@FOXP1!0.24!1.85!FOXP1;;chr1:91487629..91487640,-!p7@ZNF644!0.24!1.85!ZNF644;;chr19:53466067..53466087,-!p3@ZNF321P,p3@ZNF816-ZNF321P,p3@ZNF816!0.24!1.61!ZNF816;;chr6:43140095..43140145,+!p5@SRF!0.24!1.11!SRF;;chr11:19262486..19262512,-!p4@E2F8!0.24!1.11!E2F8;;chr17:46675420..46675465,-!p3@HOXB6!0.24!0.99!HOXB6;;chr7:100076744..100076749,-!p8@TSC22D4!0.24!0.86!TSC22D4;;chr6:106546871..106546878,+!p17@PRDM1!0.24!0.74!PRDM1;;chr6:1389824..1389840,+!p3@FOXF2!0.24!0.74!FOXF2;;chr6:170871224..170871263,+!p4@TBP!0.24!0.74!TBP;;chr6:32158046..32158055,-!p4@PBX2!0.24!0.74!PBX2;;chr7:35293665..35293680,-!p2@TBX20!0.24!0.74!TBX20;;chr8:81787006..81787031,-!p2@ZNF704!0.24!0.74!ZNF704;;chr9:115819058..115819082,-!p2@ZFP37!0.24!0.74!ZFP37;;chr10:35484090..35484104,+!p6@CREM!0.24!0.74!CREM;;chr10:8097321..8097348,+!p4@GATA3!0.24!0.74!GATA3;;chr11:16629261..16629284,-!p1@SOX6!0.24!0.74!SOX6;;chr14:35872542..35872553,-!p10@NFKBIA!0.24!0.74!NFKBIA;;chr19:47523040..47523049,+!p3@NPAS1!0.24!0.74!NPAS1;;chr1:161736032..161736035,+!p6@ATF6!0.24!0.74!ATF6;;chr15:76629064..76629073,+!p3@ISL2!0.24!0.74!ISL2;;chr15:80696666..80696700,+!p4@ARNT2!0.24!0.74!ARNT2;;chr16:54319010..54319041,-!p8@IRX3!0.24!0.74!IRX3;;chr16:67881534..67881549,-!p4@CENPT!0.24!0.74!CENPT;;chr17:38020607..38020621,-!p9@IKZF3!0.24!0.74!IKZF3;;chr18:19749504..19749515,+!p5@GATA6!0.24!0.74!GATA6;;chr19:12405588..12405595,-!p4@ZNF44!0.24!0.74!ZNF44;;chr2:175199697..175199706,+!p2@SP9!0.24!0.74!SP9;;chr2:200322229..200322251,-!p3@SATB2!0.24!0.74!SATB2;;chr2:45169024..45169033,+!p12@SIX3!0.24!0.74!SIX3;;chr2:45169172..45169177,+!p11@SIX3!0.24!0.74!SIX3;;chr2:96012277..96012290,+!p5@KCNIP3!0.24!0.74!KCNIP3;;
|fonse_cell_line=FF:0101035
|fonse_cell_line=FF:0101035
|fonse_cell_line_closure=FF:0101035
|fonse_cell_line_closure=FF:0101035
Line 66: Line 39:
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|rna_box=106
|rna_catalog_number=
|rna_concentration=0.90611
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.85
|rna_od260/280=2.12
|rna_position=G3
|rna_rin=9.7
|rna_sample_type=total RNA
|rna_tube_id=106G3
|rna_weight_ug=22.65275
|sample_age=
|sample_category=cell lines
|sample_cell_catalog=
|sample_cell_line=COBL-a
|sample_cell_lot=
|sample_cell_type=unclassifiable
|sample_collaboration=Chieko Kai (University of Tokyo)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.30031122039785e-270!GO:0043227;membrane-bound organelle;4.31010376396649e-238!GO:0043231;intracellular membrane-bound organelle;1.83170305526691e-237!GO:0043226;organelle;3.74963547277741e-234!GO:0043229;intracellular organelle;2.20845064737193e-233!GO:0044422;organelle part;2.36010425588446e-164!GO:0005737;cytoplasm;1.80261022424715e-163!GO:0044446;intracellular organelle part;4.85647135810909e-162!GO:0032991;macromolecular complex;1.51782165915454e-129!GO:0005634;nucleus;4.96489206809453e-123!GO:0044444;cytoplasmic part;1.45514952988727e-113!GO:0044237;cellular metabolic process;1.36723370853032e-111!GO:0044238;primary metabolic process;9.59441548807639e-109!GO:0043170;macromolecule metabolic process;1.97854523817246e-105!GO:0030529;ribonucleoprotein complex;4.76859654108567e-105!GO:0044428;nuclear part;5.93047446429924e-100!GO:0003723;RNA binding;7.15019340599093e-95!GO:0043233;organelle lumen;1.00891039687342e-94!GO:0031974;membrane-enclosed lumen;1.00891039687342e-94!GO:0005515;protein binding;3.72751970279717e-73!GO:0043283;biopolymer metabolic process;1.28294528127951e-72!GO:0005739;mitochondrion;2.64276719593945e-71!GO:0006396;RNA processing;9.03693252709986e-69!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.4646687742033e-67!GO:0043234;protein complex;5.67759379116902e-67!GO:0010467;gene expression;9.65510622860755e-67!GO:0006412;translation;1.21562138137503e-65!GO:0031981;nuclear lumen;3.78127836626844e-60!GO:0005840;ribosome;1.57287000968399e-56!GO:0016071;mRNA metabolic process;4.35809130180266e-53!GO:0003676;nucleic acid binding;4.00941689042336e-50!GO:0006259;DNA metabolic process;1.61485464851535e-49!GO:0003735;structural constituent of ribosome;3.62745246078736e-49!GO:0044249;cellular biosynthetic process;1.2877022681236e-48!GO:0019538;protein metabolic process;6.55213991284471e-48!GO:0044429;mitochondrial part;9.18799382633187e-48!GO:0009058;biosynthetic process;1.21294810913252e-46!GO:0008380;RNA splicing;3.37625853291604e-46!GO:0009059;macromolecule biosynthetic process;4.42402109240571e-46!GO:0016043;cellular component organization and biogenesis;2.25691815839551e-45!GO:0031090;organelle membrane;2.87069952448492e-45!GO:0006397;mRNA processing;4.14241342464371e-45!GO:0031967;organelle envelope;5.04072038348131e-45!GO:0031975;envelope;8.89518172503786e-45!GO:0044267;cellular protein metabolic process;1.35629737682404e-43!GO:0033279;ribosomal subunit;2.35098894388512e-43!GO:0006996;organelle organization and biogenesis;6.85749680657686e-43!GO:0044260;cellular macromolecule metabolic process;1.65526427219466e-42!GO:0033036;macromolecule localization;3.2984892741635e-42!GO:0015031;protein transport;9.36386445453412e-41!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.50518760572943e-39!GO:0046907;intracellular transport;5.32387535546189e-38!GO:0043228;non-membrane-bound organelle;1.01464410056555e-37!GO:0043232;intracellular non-membrane-bound organelle;1.01464410056555e-37!GO:0045184;establishment of protein localization;1.14907293266392e-37!GO:0005654;nucleoplasm;1.40870404976629e-37!GO:0008104;protein localization;2.47266366679098e-37!GO:0005829;cytosol;2.21674858079749e-36!GO:0007049;cell cycle;8.81346232927554e-36!GO:0016070;RNA metabolic process;2.45679111711193e-35!GO:0000166;nucleotide binding;2.8519616980823e-34!GO:0065003;macromolecular complex assembly;1.15649378920758e-33!GO:0005681;spliceosome;1.35378570747342e-33!GO:0006974;response to DNA damage stimulus;5.98212530834518e-31!GO:0006886;intracellular protein transport;2.22574803605511e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.54198794581818e-30!GO:0022402;cell cycle process;2.66062019090737e-29!GO:0019866;organelle inner membrane;7.40781145392224e-29!GO:0022607;cellular component assembly;1.57241982165544e-28!GO:0044451;nucleoplasm part;4.95334624448534e-28!GO:0005740;mitochondrial envelope;8.62851988490241e-28!GO:0006281;DNA repair;1.63070256807879e-27!GO:0000278;mitotic cell cycle;6.96349633808107e-27!GO:0051649;establishment of cellular localization;6.97661586327409e-27!GO:0051641;cellular localization;9.4780520267721e-27!GO:0005694;chromosome;2.39304149199788e-26!GO:0005743;mitochondrial inner membrane;4.37694468488124e-26!GO:0031966;mitochondrial membrane;5.84256642647637e-26!GO:0044445;cytosolic part;9.81759462777931e-26!GO:0031980;mitochondrial lumen;1.98633184158248e-24!GO:0005759;mitochondrial matrix;1.98633184158248e-24!GO:0032553;ribonucleotide binding;9.75928742755101e-24!GO:0032555;purine ribonucleotide binding;9.75928742755101e-24!GO:0005730;nucleolus;9.82732262079418e-24!GO:0017111;nucleoside-triphosphatase activity;1.00056357430343e-23!GO:0044427;chromosomal part;1.77262949409842e-23!GO:0017076;purine nucleotide binding;3.52328776519821e-23!GO:0016462;pyrophosphatase activity;3.86366056777052e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.86726919823601e-23!GO:0015935;small ribosomal subunit;4.86726919823601e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;6.86737267830474e-23!GO:0005524;ATP binding;1.0364372174418e-21!GO:0006119;oxidative phosphorylation;1.18295893115402e-21!GO:0016874;ligase activity;1.48347669730457e-21!GO:0000087;M phase of mitotic cell cycle;1.56564887815901e-21!GO:0022403;cell cycle phase;2.60394750006e-21!GO:0032559;adenyl ribonucleotide binding;2.62125657993214e-21!GO:0015934;large ribosomal subunit;2.69180831618165e-21!GO:0051276;chromosome organization and biogenesis;3.61137791649334e-21!GO:0012505;endomembrane system;4.15578741458317e-21!GO:0007067;mitosis;5.43596243281518e-21!GO:0044455;mitochondrial membrane part;8.98437910262356e-21!GO:0022618;protein-RNA complex assembly;1.31946033056051e-20!GO:0030554;adenyl nucleotide binding;1.58771083393757e-20!GO:0009719;response to endogenous stimulus;2.67280374179415e-20!GO:0006457;protein folding;3.79436075461687e-20!GO:0006512;ubiquitin cycle;1.5518124078893e-19!GO:0006260;DNA replication;2.00690777824831e-19!GO:0042254;ribosome biogenesis and assembly;4.2026245390852e-19!GO:0044265;cellular macromolecule catabolic process;1.33402589109972e-18!GO:0000279;M phase;1.9825087485765e-18!GO:0008134;transcription factor binding;2.64782652401443e-18!GO:0042623;ATPase activity, coupled;2.70046053082779e-18!GO:0005635;nuclear envelope;2.77557438792743e-18!GO:0008135;translation factor activity, nucleic acid binding;3.12196056030467e-18!GO:0000502;proteasome complex (sensu Eukaryota);8.85298091242861e-18!GO:0016887;ATPase activity;1.02029299553995e-17!GO:0051301;cell division;1.06063397713682e-17!GO:0006366;transcription from RNA polymerase II promoter;1.17371685761253e-17!GO:0005761;mitochondrial ribosome;2.3600491077481e-17!GO:0000313;organellar ribosome;2.3600491077481e-17!GO:0019941;modification-dependent protein catabolic process;4.16704070268855e-17!GO:0043632;modification-dependent macromolecule catabolic process;4.16704070268855e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;4.67927014056261e-17!GO:0012501;programmed cell death;9.47368886911923e-17!GO:0006511;ubiquitin-dependent protein catabolic process;9.79495532469353e-17!GO:0006915;apoptosis;1.00723756297156e-16!GO:0044257;cellular protein catabolic process;1.50740322602502e-16!GO:0044453;nuclear membrane part;1.50740322602502e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.55334670201716e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;1.55718436186199e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;1.61816867535241e-16!GO:0000375;RNA splicing, via transesterification reactions;1.61816867535241e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.61816867535241e-16!GO:0006605;protein targeting;1.7415309689639e-16!GO:0005746;mitochondrial respiratory chain;1.8577964040965e-16!GO:0006323;DNA packaging;4.34576653228114e-16!GO:0031965;nuclear membrane;8.96202721733885e-16!GO:0016604;nuclear body;1.00741568287235e-15!GO:0004386;helicase activity;1.31257898141955e-15!GO:0043285;biopolymer catabolic process;1.74291954303237e-15!GO:0008219;cell death;1.99690636024772e-15!GO:0016265;death;1.99690636024772e-15!GO:0044432;endoplasmic reticulum part;2.18005723515963e-15!GO:0051726;regulation of cell cycle;4.72325762944983e-15!GO:0050136;NADH dehydrogenase (quinone) activity;4.72325762944983e-15!GO:0003954;NADH dehydrogenase activity;4.72325762944983e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.72325762944983e-15!GO:0000074;regulation of progression through cell cycle;4.87977191857022e-15!GO:0043412;biopolymer modification;7.14163314113092e-15!GO:0005783;endoplasmic reticulum;7.14163314113092e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.13287914604821e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.00407379247123e-14!GO:0006913;nucleocytoplasmic transport;1.91979829038509e-14!GO:0050657;nucleic acid transport;1.96370920793579e-14!GO:0051236;establishment of RNA localization;1.96370920793579e-14!GO:0050658;RNA transport;1.96370920793579e-14!GO:0009057;macromolecule catabolic process;2.60572117665535e-14!GO:0006403;RNA localization;2.68360631513444e-14!GO:0044248;cellular catabolic process;4.07027878035904e-14!GO:0051082;unfolded protein binding;4.08715238109887e-14!GO:0051169;nuclear transport;5.27325472207557e-14!GO:0006399;tRNA metabolic process;5.69412566350994e-14!GO:0000785;chromatin;6.26921595048063e-14!GO:0005643;nuclear pore;7.31534288293658e-14!GO:0006333;chromatin assembly or disassembly;1.34727550661809e-13!GO:0003743;translation initiation factor activity;1.95626065629626e-13!GO:0006364;rRNA processing;1.99677883390564e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.15236859993505e-13!GO:0042773;ATP synthesis coupled electron transport;2.15236859993505e-13!GO:0065002;intracellular protein transport across a membrane;3.74732753100954e-13!GO:0030964;NADH dehydrogenase complex (quinone);4.29133264039025e-13!GO:0045271;respiratory chain complex I;4.29133264039025e-13!GO:0005747;mitochondrial respiratory chain complex I;4.29133264039025e-13!GO:0016072;rRNA metabolic process;5.65013562109238e-13!GO:0006413;translational initiation;6.21755711523319e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.79513436777442e-13!GO:0008026;ATP-dependent helicase activity;1.08757646234251e-12!GO:0030163;protein catabolic process;2.02627124852831e-12!GO:0051028;mRNA transport;2.34246997287093e-12!GO:0016607;nuclear speck;3.1580052856261e-12!GO:0006464;protein modification process;3.26876609539745e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.6852158139963e-12!GO:0065004;protein-DNA complex assembly;6.40331438383797e-12!GO:0006446;regulation of translational initiation;8.61536203330849e-12!GO:0046930;pore complex;9.23085447374374e-12!GO:0005789;endoplasmic reticulum membrane;9.87377503534598e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;9.90555770375755e-12!GO:0051186;cofactor metabolic process;1.15884773173258e-11!GO:0003712;transcription cofactor activity;1.31484680308516e-11!GO:0048770;pigment granule;1.67413434471066e-11!GO:0042470;melanosome;1.67413434471066e-11!GO:0043687;post-translational protein modification;3.42056507547414e-11!GO:0048193;Golgi vesicle transport;7.10929063360891e-11!GO:0048523;negative regulation of cellular process;9.25838384363562e-11!GO:0042981;regulation of apoptosis;9.43225677719105e-11!GO:0006261;DNA-dependent DNA replication;1.56294083903144e-10!GO:0043067;regulation of programmed cell death;1.69843010849183e-10!GO:0006732;coenzyme metabolic process;2.27129018178167e-10!GO:0017038;protein import;2.97208226682172e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.81500946757795e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.32023384818217e-10!GO:0004812;aminoacyl-tRNA ligase activity;4.32023384818217e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.32023384818217e-10!GO:0043566;structure-specific DNA binding;5.22325694639107e-10!GO:0050794;regulation of cellular process;5.3822621233489e-10!GO:0009055;electron carrier activity;8.77650742280987e-10!GO:0009259;ribonucleotide metabolic process;9.27442279003083e-10!GO:0015630;microtubule cytoskeleton;9.27442279003083e-10!GO:0043038;amino acid activation;1.14007289053426e-09!GO:0006418;tRNA aminoacylation for protein translation;1.14007289053426e-09!GO:0043039;tRNA aminoacylation;1.14007289053426e-09!GO:0006334;nucleosome assembly;1.20307161933331e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.56869448993427e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.61010210589084e-09!GO:0031324;negative regulation of cellular metabolic process;1.87417294458376e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.01241621634206e-09!GO:0003697;single-stranded DNA binding;2.18852643565665e-09!GO:0016563;transcription activator activity;2.35275095366099e-09!GO:0006163;purine nucleotide metabolic process;2.64075576699852e-09!GO:0016564;transcription repressor activity;2.91455037692648e-09!GO:0048519;negative regulation of biological process;3.08728062079085e-09!GO:0031497;chromatin assembly;3.79229347540237e-09!GO:0008565;protein transporter activity;4.04977125930936e-09!GO:0005794;Golgi apparatus;4.375284989586e-09!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.23643288804519e-09!GO:0016568;chromatin modification;5.62849759171861e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.23120943115431e-09!GO:0006916;anti-apoptosis;6.71735102123414e-09!GO:0006164;purine nucleotide biosynthetic process;7.60032191030995e-09!GO:0043069;negative regulation of programmed cell death;8.32907709354204e-09!GO:0019222;regulation of metabolic process;8.99720124843859e-09!GO:0043066;negative regulation of apoptosis;1.04083654954064e-08!GO:0009260;ribonucleotide biosynthetic process;1.0432331719625e-08!GO:0051246;regulation of protein metabolic process;1.2105157231156e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.56170234480277e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.56170234480277e-08!GO:0008639;small protein conjugating enzyme activity;2.33178398657704e-08!GO:0009150;purine ribonucleotide metabolic process;2.43993020265408e-08!GO:0019829;cation-transporting ATPase activity;2.79803906934805e-08!GO:0004842;ubiquitin-protein ligase activity;4.09627160741577e-08!GO:0005839;proteasome core complex (sensu Eukaryota);5.31089467000216e-08!GO:0000775;chromosome, pericentric region;5.53553961259223e-08!GO:0016779;nucleotidyltransferase activity;6.21601536964344e-08!GO:0009152;purine ribonucleotide biosynthetic process;7.19957340445755e-08!GO:0006793;phosphorus metabolic process;7.6240711283613e-08!GO:0006796;phosphate metabolic process;7.6240711283613e-08!GO:0009892;negative regulation of metabolic process;9.4522323013279e-08!GO:0019787;small conjugating protein ligase activity;1.02889857858924e-07!GO:0015986;ATP synthesis coupled proton transport;1.10096599709161e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.10096599709161e-07!GO:0051188;cofactor biosynthetic process;1.40454613054171e-07!GO:0007005;mitochondrion organization and biogenesis;1.49560386242785e-07!GO:0005793;ER-Golgi intermediate compartment;1.5367616498e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.59053772728865e-07!GO:0005657;replication fork;1.68559409824202e-07!GO:0006461;protein complex assembly;1.69785829091143e-07!GO:0004298;threonine endopeptidase activity;2.27012553170871e-07!GO:0009060;aerobic respiration;2.34999803901829e-07!GO:0005819;spindle;2.57116871344925e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.60178913306852e-07!GO:0016740;transferase activity;2.7220005244226e-07!GO:0006310;DNA recombination;2.72441999447876e-07!GO:0031323;regulation of cellular metabolic process;2.8145169000867e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.82310479146156e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.82310479146156e-07!GO:0009141;nucleoside triphosphate metabolic process;2.93323311024824e-07!GO:0051170;nuclear import;3.22569784730113e-07!GO:0016881;acid-amino acid ligase activity;3.44038870582307e-07!GO:0009056;catabolic process;3.45477028826437e-07!GO:0016481;negative regulation of transcription;3.73802877437831e-07!GO:0051168;nuclear export;3.76520679541387e-07!GO:0000245;spliceosome assembly;3.842967787294e-07!GO:0016192;vesicle-mediated transport;4.62451401993555e-07!GO:0000075;cell cycle checkpoint;5.41173409626476e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.65532116195796e-07!GO:0009144;purine nucleoside triphosphate metabolic process;5.65532116195796e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.03110796572855e-07!GO:0005813;centrosome;6.1024553786418e-07!GO:0006606;protein import into nucleus;6.44253498412303e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.45739045021775e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.45739045021775e-07!GO:0016787;hydrolase activity;6.59398492096911e-07!GO:0051329;interphase of mitotic cell cycle;7.44640608117974e-07!GO:0015078;hydrogen ion transmembrane transporter activity;8.55549895029375e-07!GO:0045259;proton-transporting ATP synthase complex;8.7196243706379e-07!GO:0051325;interphase;9.09884438242768e-07!GO:0008094;DNA-dependent ATPase activity;9.79431396027027e-07!GO:0006350;transcription;1.06830486775888e-06!GO:0006754;ATP biosynthetic process;1.1170843902213e-06!GO:0006753;nucleoside phosphate metabolic process;1.1170843902213e-06!GO:0046034;ATP metabolic process;1.34045165204516e-06!GO:0009108;coenzyme biosynthetic process;1.44179220431325e-06!GO:0045333;cellular respiration;1.49393979952473e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.54807887032696e-06!GO:0005815;microtubule organizing center;1.55212427832125e-06!GO:0005667;transcription factor complex;1.72834952200629e-06!GO:0006752;group transfer coenzyme metabolic process;1.76193418744919e-06!GO:0006099;tricarboxylic acid cycle;1.8518825538415e-06!GO:0046356;acetyl-CoA catabolic process;1.8518825538415e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.91803453516262e-06!GO:0015399;primary active transmembrane transporter activity;1.91803453516262e-06!GO:0003702;RNA polymerase II transcription factor activity;1.98905958659128e-06!GO:0048475;coated membrane;2.31968207886223e-06!GO:0030117;membrane coat;2.31968207886223e-06!GO:0007051;spindle organization and biogenesis;2.35679097368429e-06!GO:0016310;phosphorylation;2.38155357155827e-06!GO:0045941;positive regulation of transcription;2.39397968560649e-06!GO:0003899;DNA-directed RNA polymerase activity;2.60767595999911e-06!GO:0050789;regulation of biological process;2.6324050684044e-06!GO:0045786;negative regulation of progression through cell cycle;2.70551770390436e-06!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.75492591742162e-06!GO:0003677;DNA binding;2.83856746109181e-06!GO:0003724;RNA helicase activity;3.0110710402409e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.29223137472537e-06!GO:0005762;mitochondrial large ribosomal subunit;3.29223137472537e-06!GO:0000315;organellar large ribosomal subunit;3.29223137472537e-06!GO:0006084;acetyl-CoA metabolic process;3.43633575580186e-06!GO:0006613;cotranslational protein targeting to membrane;3.74485325053904e-06!GO:0003713;transcription coactivator activity;3.96425504940508e-06!GO:0006417;regulation of translation;4.35671096530023e-06!GO:0003682;chromatin binding;4.56402402567565e-06!GO:0006302;double-strand break repair;4.66221018814632e-06!GO:0030120;vesicle coat;4.78409996390329e-06!GO:0030662;coated vesicle membrane;4.78409996390329e-06!GO:0010468;regulation of gene expression;5.81191317465184e-06!GO:0016363;nuclear matrix;6.00954292940172e-06!GO:0008033;tRNA processing;9.85748735349789e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.18064111762836e-05!GO:0003690;double-stranded DNA binding;1.40487421316906e-05!GO:0004527;exonuclease activity;1.50546666874687e-05!GO:0000786;nucleosome;1.63379031654061e-05!GO:0003714;transcription corepressor activity;1.65692014301005e-05!GO:0005048;signal sequence binding;1.80182147144432e-05!GO:0007059;chromosome segregation;1.8476376515144e-05!GO:0006414;translational elongation;1.87375081823414e-05!GO:0009109;coenzyme catabolic process;1.87730733835192e-05!GO:0006402;mRNA catabolic process;1.89127298429894e-05!GO:0048522;positive regulation of cellular process;1.91896916310669e-05!GO:0032446;protein modification by small protein conjugation;1.92855201809632e-05!GO:0000314;organellar small ribosomal subunit;2.18893284493025e-05!GO:0005763;mitochondrial small ribosomal subunit;2.18893284493025e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.43432872557635e-05!GO:0006401;RNA catabolic process;2.43432872557635e-05!GO:0003684;damaged DNA binding;2.56528225735973e-05!GO:0009117;nucleotide metabolic process;2.63507939622906e-05!GO:0043021;ribonucleoprotein binding;2.69835213412636e-05!GO:0045893;positive regulation of transcription, DNA-dependent;2.70766477402375e-05!GO:0000776;kinetochore;2.77099740852003e-05!GO:0044452;nucleolar part;2.78325193241109e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.80423484354678e-05!GO:0003678;DNA helicase activity;2.92879431671659e-05!GO:0016741;transferase activity, transferring one-carbon groups;3.12697397398225e-05!GO:0016567;protein ubiquitination;3.12697397398225e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.75199397621911e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.97848339997268e-05!GO:0019899;enzyme binding;4.4902213882189e-05!GO:0007017;microtubule-based process;4.54959595599213e-05!GO:0032774;RNA biosynthetic process;4.56191550717051e-05!GO:0031326;regulation of cellular biosynthetic process;4.56191550717051e-05!GO:0005788;endoplasmic reticulum lumen;4.7783530485322e-05!GO:0008654;phospholipid biosynthetic process;4.87474708863017e-05!GO:0008168;methyltransferase activity;4.90277709619985e-05!GO:0006612;protein targeting to membrane;4.9702013906671e-05!GO:0043492;ATPase activity, coupled to movement of substances;5.57632004913905e-05!GO:0016853;isomerase activity;5.98027542245398e-05!GO:0007010;cytoskeleton organization and biogenesis;5.98749204601297e-05!GO:0006351;transcription, DNA-dependent;5.98749204601297e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;6.10759559165118e-05!GO:0043681;protein import into mitochondrion;6.63606278191137e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;7.06731981205485e-05!GO:0045454;cell redox homeostasis;7.29333005785214e-05!GO:0007088;regulation of mitosis;7.77307255316525e-05!GO:0043623;cellular protein complex assembly;8.60918093301174e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;8.62653322226892e-05!GO:0051052;regulation of DNA metabolic process;8.81340425442421e-05!GO:0005768;endosome;8.87387992537794e-05!GO:0051427;hormone receptor binding;8.92688591738369e-05!GO:0003729;mRNA binding;9.10062732281062e-05!GO:0008186;RNA-dependent ATPase activity;9.10062732281062e-05!GO:0045892;negative regulation of transcription, DNA-dependent;0.000109064864052438!GO:0006626;protein targeting to mitochondrion;0.00011504991134077!GO:0006839;mitochondrial transport;0.000153135315593494!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000156626406135458!GO:0051187;cofactor catabolic process;0.000157779007155783!GO:0030867;rough endoplasmic reticulum membrane;0.000159174296540242!GO:0006405;RNA export from nucleus;0.000164662195311854!GO:0035257;nuclear hormone receptor binding;0.000184646315279034!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00018472856006427!GO:0004518;nuclease activity;0.000192206712105743!GO:0000049;tRNA binding;0.000195794231293892!GO:0005874;microtubule;0.000196878225058463!GO:0006383;transcription from RNA polymerase III promoter;0.000199171616592883!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000211340653161088!GO:0031072;heat shock protein binding;0.000212251376429318!GO:0007243;protein kinase cascade;0.000216123904958361!GO:0007006;mitochondrial membrane organization and biogenesis;0.000224497000915214!GO:0005770;late endosome;0.000234350858674406!GO:0003924;GTPase activity;0.00024805954061684!GO:0000151;ubiquitin ligase complex;0.000252647253389254!GO:0006520;amino acid metabolic process;0.000258519398844906!GO:0004004;ATP-dependent RNA helicase activity;0.000275825213541364!GO:0005798;Golgi-associated vesicle;0.000279045116316071!GO:0005525;GTP binding;0.000295770998443804!GO:0009889;regulation of biosynthetic process;0.000351331818504078!GO:0044431;Golgi apparatus part;0.00035615291767113!GO:0016251;general RNA polymerase II transcription factor activity;0.000370732689090744!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000430235511208496!GO:0032508;DNA duplex unwinding;0.000459523545408725!GO:0032392;DNA geometric change;0.000459523545408725!GO:0030384;phosphoinositide metabolic process;0.000565120281995458!GO:0016859;cis-trans isomerase activity;0.000574692656078684!GO:0005637;nuclear inner membrane;0.000583051942729424!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00058343858265063!GO:0009893;positive regulation of metabolic process;0.000602560253621898!GO:0005885;Arp2/3 protein complex;0.000605214886602634!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000608812436087223!GO:0006091;generation of precursor metabolites and energy;0.000628548930170864!GO:0048500;signal recognition particle;0.000706937085516951!GO:0045449;regulation of transcription;0.000715418996028485!GO:0030880;RNA polymerase complex;0.000725781036162617!GO:0048468;cell development;0.000741357337219586!GO:0051789;response to protein stimulus;0.000776190576009242!GO:0006986;response to unfolded protein;0.000776190576009242!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000791963875990523!GO:0019752;carboxylic acid metabolic process;0.000802066339937537!GO:0046489;phosphoinositide biosynthetic process;0.000840186954598548!GO:0005684;U2-dependent spliceosome;0.000860541999810526!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.000868725685084987!GO:0000096;sulfur amino acid metabolic process;0.000868725685084987!GO:0006082;organic acid metabolic process;0.000881137665337103!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000898903544715331!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000898903544715331!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000898903544715331!GO:0031325;positive regulation of cellular metabolic process;0.000914279896499813!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000965519205787649!GO:0043065;positive regulation of apoptosis;0.000965519205787649!GO:0007093;mitotic cell cycle checkpoint;0.000975800643519184!GO:0030433;ER-associated protein catabolic process;0.00101879512568864!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00101879512568864!GO:0051920;peroxiredoxin activity;0.00107683341446312!GO:0006268;DNA unwinding during replication;0.00108401088557459!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00111896798566138!GO:0042802;identical protein binding;0.00117429414304938!GO:0000059;protein import into nucleus, docking;0.00120289510161422!GO:0009165;nucleotide biosynthetic process;0.00121453725155671!GO:0000287;magnesium ion binding;0.00124565979502583!GO:0008139;nuclear localization sequence binding;0.00125852863944036!GO:0008312;7S RNA binding;0.00131028411975307!GO:0043068;positive regulation of programmed cell death;0.00131110121524418!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00131541585047599!GO:0006650;glycerophospholipid metabolic process;0.00135917151568886!GO:0006611;protein export from nucleus;0.00136017393867723!GO:0005758;mitochondrial intermembrane space;0.00138439271416979!GO:0000082;G1/S transition of mitotic cell cycle;0.00139428402238196!GO:0006352;transcription initiation;0.00139656866283151!GO:0006284;base-excision repair;0.00146469862872043!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00149236677910135!GO:0000428;DNA-directed RNA polymerase complex;0.00149236677910135!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00149303072940231!GO:0051252;regulation of RNA metabolic process;0.00151747929467784!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00156671729081819!GO:0045185;maintenance of protein localization;0.00157213305936276!GO:0019843;rRNA binding;0.00158147299793216!GO:0006289;nucleotide-excision repair;0.00164349652843177!GO:0032259;methylation;0.00166441104758303!GO:0042770;DNA damage response, signal transduction;0.00176165094687025!GO:0006818;hydrogen transport;0.00186163722563246!GO:0015992;proton transport;0.00190333580698825!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00193019019848587!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00193019019848587!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00198135061844969!GO:0045047;protein targeting to ER;0.00198135061844969!GO:0004532;exoribonuclease activity;0.00198256644102326!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00198256644102326!GO:0000097;sulfur amino acid biosynthetic process;0.00204313067513441!GO:0006695;cholesterol biosynthetic process;0.00207882573486907!GO:0007052;mitotic spindle organization and biogenesis;0.00217726505775764!GO:0016126;sterol biosynthetic process;0.00217726505775764!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00218349437739873!GO:0032561;guanyl ribonucleotide binding;0.00218631612209019!GO:0019001;guanyl nucleotide binding;0.00218631612209019!GO:0046474;glycerophospholipid biosynthetic process;0.00219951529057629!GO:0006275;regulation of DNA replication;0.00222355390142342!GO:0031124;mRNA 3'-end processing;0.00222653614843406!GO:0048518;positive regulation of biological process;0.0022448755833498!GO:0030663;COPI coated vesicle membrane;0.00228822361946921!GO:0030126;COPI vesicle coat;0.00228822361946921!GO:0031982;vesicle;0.00234888871545742!GO:0006270;DNA replication initiation;0.00237886599455222!GO:0004674;protein serine/threonine kinase activity;0.00240713687711018!GO:0003746;translation elongation factor activity;0.0024139646263934!GO:0031970;organelle envelope lumen;0.0024139646263934!GO:0032507;maintenance of cellular protein localization;0.00243470986687412!GO:0030176;integral to endoplasmic reticulum membrane;0.00250176743046591!GO:0006891;intra-Golgi vesicle-mediated transport;0.00256040479481857!GO:0051087;chaperone binding;0.0026412585336736!GO:0051539;4 iron, 4 sulfur cluster binding;0.002730239760313!GO:0031570;DNA integrity checkpoint;0.00278970194721568!GO:0043596;nuclear replication fork;0.00289066532711869!GO:0006355;regulation of transcription, DNA-dependent;0.00292334526147027!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00310468581758826!GO:0031123;RNA 3'-end processing;0.00330457872343053!GO:0009451;RNA modification;0.00340197645636998!GO:0008652;amino acid biosynthetic process;0.00341338670641569!GO:0048471;perinuclear region of cytoplasm;0.00347592408862393!GO:0030137;COPI-coated vesicle;0.00350216574146669!GO:0008408;3'-5' exonuclease activity;0.00355765262351129!GO:0065007;biological regulation;0.00378557105898116!GO:0006144;purine base metabolic process;0.00398910152407338!GO:0033116;ER-Golgi intermediate compartment membrane;0.00399256383884463!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0041385175415264!GO:0046467;membrane lipid biosynthetic process;0.00415241891841393!GO:0009112;nucleobase metabolic process;0.00417544444797333!GO:0016491;oxidoreductase activity;0.00437935723658095!GO:0005773;vacuole;0.00454378919212227!GO:0000139;Golgi membrane;0.00455205280978462!GO:0031988;membrane-bound vesicle;0.00459880889348426!GO:0046483;heterocycle metabolic process;0.00477007336509318!GO:0030134;ER to Golgi transport vesicle;0.00488731494661385!GO:0051235;maintenance of localization;0.00489917723073435!GO:0000922;spindle pole;0.00490194423731814!GO:0005876;spindle microtubule;0.00506395333353374!GO:0000228;nuclear chromosome;0.00509757355790144!GO:0007346;regulation of progression through mitotic cell cycle;0.00510260863239203!GO:0031968;organelle outer membrane;0.00511047821572247!GO:0006595;polyamine metabolic process;0.00517068365129139!GO:0019867;outer membrane;0.00524955689163099!GO:0000323;lytic vacuole;0.00525003455238455!GO:0005764;lysosome;0.00525003455238455!GO:0000339;RNA cap binding;0.00525947529819207!GO:0000725;recombinational repair;0.00528266728217545!GO:0000724;double-strand break repair via homologous recombination;0.00528266728217545!GO:0000819;sister chromatid segregation;0.00528360227604335!GO:0016272;prefoldin complex;0.00533667953677787!GO:0000178;exosome (RNase complex);0.00567155881713073!GO:0051651;maintenance of cellular localization;0.0057246422447818!GO:0051053;negative regulation of DNA metabolic process;0.00580112617304347!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00580677142684851!GO:0032200;telomere organization and biogenesis;0.00580677142684851!GO:0000723;telomere maintenance;0.00580677142684851!GO:0000792;heterochromatin;0.00580677142684851!GO:0000070;mitotic sister chromatid segregation;0.00583972239717418!GO:0030658;transport vesicle membrane;0.00586495822081981!GO:0008022;protein C-terminus binding;0.00595002716728926!GO:0006519;amino acid and derivative metabolic process;0.00627841156520393!GO:0019783;small conjugating protein-specific protease activity;0.00637102631537572!GO:0031410;cytoplasmic vesicle;0.00643502374707293!GO:0003711;transcription elongation regulator activity;0.00651442694303172!GO:0065009;regulation of a molecular function;0.00651941833170381!GO:0004003;ATP-dependent DNA helicase activity;0.00654822233111644!GO:0043414;biopolymer methylation;0.00698866208443236!GO:0008610;lipid biosynthetic process;0.0070813061898588!GO:0044440;endosomal part;0.00722526644109076!GO:0010008;endosome membrane;0.00722526644109076!GO:0016584;nucleosome positioning;0.00725700006138809!GO:0030127;COPII vesicle coat;0.00725734519859504!GO:0012507;ER to Golgi transport vesicle membrane;0.00725734519859504!GO:0006378;mRNA polyadenylation;0.00732494139115272!GO:0043488;regulation of mRNA stability;0.00732494139115272!GO:0043487;regulation of RNA stability;0.00732494139115272!GO:0004843;ubiquitin-specific protease activity;0.00733550762868544!GO:0016790;thiolester hydrolase activity;0.00737596980057499!GO:0043284;biopolymer biosynthetic process;0.00747137467622882!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00747137467622882!GO:0050662;coenzyme binding;0.00763581083364422!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.00766579690392363!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00787984371013095!GO:0015002;heme-copper terminal oxidase activity;0.00787984371013095!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00787984371013095!GO:0004129;cytochrome-c oxidase activity;0.00787984371013095!GO:0005669;transcription factor TFIID complex;0.0079448221206741!GO:0005853;eukaryotic translation elongation factor 1 complex;0.00804576330683607!GO:0006917;induction of apoptosis;0.00813818582192514!GO:0031252;leading edge;0.00819962335542847!GO:0043022;ribosome binding;0.00838135590224912!GO:0015980;energy derivation by oxidation of organic compounds;0.00838905701624815!GO:0000077;DNA damage checkpoint;0.00852521686812955!GO:0005832;chaperonin-containing T-complex;0.00902339661607564!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00906923035468785!GO:0031902;late endosome membrane;0.00941410739433979!GO:0022415;viral reproductive process;0.0095611185406013!GO:0006730;one-carbon compound metabolic process;0.00968314837140862!GO:0003725;double-stranded RNA binding;0.00983566849402485!GO:0015631;tubulin binding;0.00991149705999731!GO:0046983;protein dimerization activity;0.0102702567751201!GO:0043601;nuclear replisome;0.0102906153244789!GO:0030894;replisome;0.0102906153244789!GO:0022890;inorganic cation transmembrane transporter activity;0.0105811853289887!GO:0012502;induction of programmed cell death;0.0108072373598736!GO:0016023;cytoplasmic membrane-bound vesicle;0.0110684772345313!GO:0006406;mRNA export from nucleus;0.0110793597569175!GO:0004221;ubiquitin thiolesterase activity;0.0114040086571626!GO:0004576;oligosaccharyl transferase activity;0.0115263009346101!GO:0000175;3'-5'-exoribonuclease activity;0.0115630793014546!GO:0005791;rough endoplasmic reticulum;0.0116074271683829!GO:0051540;metal cluster binding;0.0120459540061548!GO:0051536;iron-sulfur cluster binding;0.0120459540061548!GO:0006506;GPI anchor biosynthetic process;0.0123562505771306!GO:0042393;histone binding;0.0123967481181248!GO:0030118;clathrin coat;0.0129435731249177!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0131207211391218!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0133118062156951!GO:0000910;cytokinesis;0.0133303130933672!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0136283849776773!GO:0006400;tRNA modification;0.0137509870803846!GO:0005741;mitochondrial outer membrane;0.0141281382513649!GO:0006984;ER-nuclear signaling pathway;0.0141580443450743!GO:0051223;regulation of protein transport;0.0141580443450743!GO:0006376;mRNA splice site selection;0.0142149671262931!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0142149671262931!GO:0030660;Golgi-associated vesicle membrane;0.0145215443001123!GO:0000726;non-recombinational repair;0.0150439561923027!GO:0006505;GPI anchor metabolic process;0.0152237324019719!GO:0046822;regulation of nucleocytoplasmic transport;0.0155114502233729!GO:0046966;thyroid hormone receptor binding;0.0155974181462603!GO:0008538;proteasome activator activity;0.0163587178238439!GO:0045045;secretory pathway;0.0165240099702036!GO:0040029;regulation of gene expression, epigenetic;0.0165360915451818!GO:0030521;androgen receptor signaling pathway;0.0170634763711404!GO:0016788;hydrolase activity, acting on ester bonds;0.017596790210576!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0176229969453086!GO:0033673;negative regulation of kinase activity;0.0180291540954197!GO:0006469;negative regulation of protein kinase activity;0.0180291540954197!GO:0035258;steroid hormone receptor binding;0.0181168737565851!GO:0006338;chromatin remodeling;0.0182830065014687!GO:0008250;oligosaccharyl transferase complex;0.0189037028289251!GO:0008287;protein serine/threonine phosphatase complex;0.0190727275814187!GO:0016311;dephosphorylation;0.0190727275814187!GO:0006950;response to stress;0.0197010576040615!GO:0008276;protein methyltransferase activity;0.0197536593395313!GO:0006643;membrane lipid metabolic process;0.0199888320283984!GO:0006518;peptide metabolic process;0.0200225576033646!GO:0051348;negative regulation of transferase activity;0.0207653735584971!GO:0048487;beta-tubulin binding;0.0208154496784206!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0212932660287672!GO:0000738;DNA catabolic process, exonucleolytic;0.0215219151956911!GO:0042613;MHC class II protein complex;0.0216879751752922!GO:0006007;glucose catabolic process;0.021859764989401!GO:0043631;RNA polyadenylation;0.021859764989401!GO:0008320;protein transmembrane transporter activity;0.021859764989401!GO:0022884;macromolecule transmembrane transporter activity;0.0218815706250311!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0218815706250311!GO:0008180;signalosome;0.0218815706250311!GO:0009124;nucleoside monophosphate biosynthetic process;0.0226151654260694!GO:0009123;nucleoside monophosphate metabolic process;0.0226151654260694!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0226311438263105!GO:0045039;protein import into mitochondrial inner membrane;0.0226311438263105!GO:0009303;rRNA transcription;0.0227549051640996!GO:0031625;ubiquitin protein ligase binding;0.0227549051640996!GO:0006672;ceramide metabolic process;0.0228811728487619!GO:0000209;protein polyubiquitination;0.0230120423216986!GO:0008156;negative regulation of DNA replication;0.0230552418663376!GO:0008632;apoptotic program;0.0234728358069431!GO:0006497;protein amino acid lipidation;0.0241037914655401!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0246311495454996!GO:0030036;actin cytoskeleton organization and biogenesis;0.024850950711212!GO:0005663;DNA replication factor C complex;0.02557452271963!GO:0003756;protein disulfide isomerase activity;0.0257006259579279!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0257006259579279!GO:0046979;TAP2 binding;0.0260077487423592!GO:0046977;TAP binding;0.0260077487423592!GO:0046978;TAP1 binding;0.0260077487423592!GO:0006220;pyrimidine nucleotide metabolic process;0.026261215720918!GO:0043130;ubiquitin binding;0.026261215720918!GO:0032182;small conjugating protein binding;0.026261215720918!GO:0007050;cell cycle arrest;0.0264796605596031!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0267527730011009!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0267527730011009!GO:0008637;apoptotic mitochondrial changes;0.0268803313378574!GO:0007569;cell aging;0.0271955561665158!GO:0019976;interleukin-2 binding;0.0272296844360606!GO:0004911;interleukin-2 receptor activity;0.0272296844360606!GO:0000781;chromosome, telomeric region;0.0272378712150445!GO:0008299;isoprenoid biosynthetic process;0.0272746308707543!GO:0030496;midbody;0.0277336939081518!GO:0006301;postreplication repair;0.0280838985100022!GO:0008097;5S rRNA binding;0.0285888364460547!GO:0046112;nucleobase biosynthetic process;0.0286328930655503!GO:0003727;single-stranded RNA binding;0.0287921334341144!GO:0004523;ribonuclease H activity;0.029261871618708!GO:0044454;nuclear chromosome part;0.0295474202267131!GO:0047485;protein N-terminus binding;0.0299724806448132!GO:0009116;nucleoside metabolic process;0.0304973679685816!GO:0005869;dynactin complex;0.03081031399996!GO:0046519;sphingoid metabolic process;0.0312206720802203!GO:0005732;small nucleolar ribonucleoprotein complex;0.0315073160567522!GO:0005850;eukaryotic translation initiation factor 2 complex;0.031529553071499!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0318396134050497!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0320433761648195!GO:0051287;NAD binding;0.0320525113913979!GO:0008629;induction of apoptosis by intracellular signals;0.0332889296312403!GO:0018196;peptidyl-asparagine modification;0.0343201940914785!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0343201940914785!GO:0004721;phosphoprotein phosphatase activity;0.0343242205106017!GO:0005652;nuclear lamina;0.0343242205106017!GO:0009067;aspartate family amino acid biosynthetic process;0.0343242205106017!GO:0051258;protein polymerization;0.0345501440853598!GO:0032984;macromolecular complex disassembly;0.034659507772628!GO:0030041;actin filament polymerization;0.0347288830913633!GO:0016408;C-acyltransferase activity;0.0356162412452287!GO:0009066;aspartate family amino acid metabolic process;0.0360317490686411!GO:0016585;chromatin remodeling complex;0.0363776259831052!GO:0044450;microtubule organizing center part;0.0367252640202057!GO:0006596;polyamine biosynthetic process;0.0370737000199731!GO:0016791;phosphoric monoester hydrolase activity;0.0373516869427591!GO:0005784;translocon complex;0.0373516869427591!GO:0019238;cyclohydrolase activity;0.037559725475554!GO:0030508;thiol-disulfide exchange intermediate activity;0.0378623328641475!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0390751924815781!GO:0032039;integrator complex;0.039351755106732!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0398064128005233!GO:0051881;regulation of mitochondrial membrane potential;0.0402345575491303!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0404580607915474!GO:0030833;regulation of actin filament polymerization;0.0407200425902059!GO:0008017;microtubule binding;0.0407563524095855!GO:0008537;proteasome activator complex;0.0408095042523485!GO:0007034;vacuolar transport;0.0408913793032519!GO:0005658;alpha DNA polymerase:primase complex;0.0413858218930982!GO:0051059;NF-kappaB binding;0.0417161576939695!GO:0030119;AP-type membrane coat adaptor complex;0.0420318880676302!GO:0009396;folic acid and derivative biosynthetic process;0.0421873461524697!GO:0031529;ruffle organization and biogenesis;0.0422407876955388!GO:0008234;cysteine-type peptidase activity;0.0425160152310266!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0428406012784275!GO:0031577;spindle checkpoint;0.0438845973503684!GO:0031371;ubiquitin conjugating enzyme complex;0.0438845973503684!GO:0006644;phospholipid metabolic process;0.0444343611465272!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0446427201205298!GO:0046488;phosphatidylinositol metabolic process;0.0448216567570025!GO:0016197;endosome transport;0.0451699448933394!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0451699448933394!GO:0010257;NADH dehydrogenase complex assembly;0.0451699448933394!GO:0033108;mitochondrial respiratory chain complex assembly;0.0451699448933394!GO:0030968;unfolded protein response;0.0459772936677047!GO:0009967;positive regulation of signal transduction;0.0459772936677047!GO:0004540;ribonuclease activity;0.0461972820959387!GO:0004659;prenyltransferase activity;0.0464963644037295!GO:0006465;signal peptide processing;0.0466695826807859!GO:0051656;establishment of organelle localization;0.0468768896734784!GO:0042026;protein refolding;0.0473781151194272!GO:0009161;ribonucleoside monophosphate metabolic process;0.0474143678630287!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0474143678630287!GO:0000152;nuclear ubiquitin ligase complex;0.0474952388331796!GO:0048037;cofactor binding;0.0485001226949347!GO:0009308;amine metabolic process;0.0485054330370569!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0489001729863989!GO:0043241;protein complex disassembly;0.0494894261448043!GO:0008173;RNA methyltransferase activity;0.0496445251646885!GO:0005769;early endosome;0.0498613648712835!GO:0046426;negative regulation of JAK-STAT cascade;0.0498613648712835!GO:0006096;glycolysis;0.0498613648712835
|sample_id=10453
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=HOX{A6,A7,B6,B7}:1.95160735081;NFKB1_REL_RELA:1.78976138304;NFY{A,B,C}:1.71043348545;TLX2:1.65231652568;YY1:1.63149742272;E2F1..5:1.60626598453;HOXA9_MEIS1:1.5225882162;FOXP3:1.43849035879;NKX2-1,4:1.42110496741;CREB1:1.30885092753;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.30586523448;FOXP1:1.27253427556;GFI1:1.18934222907;BREu{core}:1.17356155303;RBPJ:1.15181441435;CRX:1.14869180682;MYB:1.12883380461;ATF4:1.12346171495;PAX4:1.08893212578;STAT5{A,B}:1.04825517698;ELF1,2,4:0.996359661605;POU3F1..4:0.996165482484;TEF:0.980781046476;AIRE:0.942184882829;RORA:0.939487306097;NRF1:0.933716835112;HES1:0.933237454587;STAT2,4,6:0.921455064601;ELK1,4_GABP{A,B1}:0.915065192711;TFDP1:0.793759290751;PAX8:0.764058722328;DBP:0.694176608949;ZFP161:0.689376972435;NANOG:0.681313237726;ONECUT1,2:0.650359518032;MYOD1:0.645227405265;PBX1:0.635680749845;POU2F1..3:0.627701872836;POU1F1:0.606321865991;AHR_ARNT_ARNT2:0.605097649567;PITX1..3:0.600606830952;RFX2..5_RFXANK_RFXAP:0.581272505699;ZNF143:0.553697017101;CDX1,2,4:0.545774486069;ATF5_CREB3:0.54560254748;LEF1_TCF7_TCF7L1,2:0.53104050542;HSF1,2:0.512742791167;RUNX1..3:0.504789572634;ESRRA:0.492094150523;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.464347335362;ADNP_IRX_SIX_ZHX:0.423093072083;TGIF1:0.422201021249;ATF6:0.393994788216;FOXQ1:0.373637151902;FOXM1:0.366424921167;GCM1,2:0.353738670475;SOX{8,9,10}:0.335910325236;EVI1:0.331501602093;CUX2:0.327639596065;NFE2L1:0.313051418375;PDX1:0.288499894493;SOX17:0.282794525138;SPI1:0.254334760139;PAX1,9:0.254176442402;ESR1:0.244820536112;IRF1,2:0.236500226605;STAT1,3:0.221567248993;bHLH_family:0.22066913116;ZBTB16:0.219378197312;NKX6-1,2:0.171108377697;BPTF:0.154737534057;JUN:0.147592276583;POU5F1:0.139304923288;HIF1A:0.120147284089;FOXN1:0.113416278014;EGR1..3:0.0934498360426;PAX3,7:0.0803791686062;RXR{A,B,G}:0.0619151277101;TP53:0.0603944898272;GATA6:0.0533511472148;ZNF148:-0.00119186812144;TOPORS:-0.00861797408232;MTE{core}:-0.0165116524992;MYFfamily:-0.0587416013998;CEBPA,B_DDIT3:-0.0861517789988;MAFB:-0.11127764544;RREB1:-0.113205178379;ATF2:-0.121917275593;SOX5:-0.131789283767;HIC1:-0.139446999195;SPIB:-0.160119500433;PAX6:-0.161246618701;HNF4A_NR2F1,2:-0.170653642306;ETS1,2:-0.171102838219;RFX1:-0.186285629046;REST:-0.189350704385;NR5A1,2:-0.190458401226;TFAP2{A,C}:-0.194917014746;HOX{A4,D4}:-0.21856932423;POU6F1:-0.23054458493;HNF1A:-0.250523290823;XBP1:-0.258844627954;FOS_FOS{B,L1}_JUN{B,D}:-0.261017220053;FOSL2:-0.266379364557;NKX3-1:-0.268381768329;LHX3,4:-0.27443704991;PRRX1,2:-0.275006346035;PAX5:-0.27789311466;SOX2:-0.282662961783;NFE2:-0.286926307153;SNAI1..3:-0.300398288897;FOX{I1,J2}:-0.301527640498;MED-1{core}:-0.320283842826;FOXA2:-0.328168956076;ZIC1..3:-0.340397855632;TFAP2B:-0.349534372816;NFATC1..3:-0.35174797446;GFI1B:-0.359998713402;IKZF2:-0.360324983581;FOX{F1,F2,J1}:-0.362422461529;VSX1,2:-0.370178807798;SRF:-0.373584053649;NR1H4:-0.396720474359;PATZ1:-0.399287598425;BACH2:-0.447026733451;MYBL2:-0.452595482521;MEF2{A,B,C,D}:-0.46240830851;ZEB1:-0.468430835653;NKX3-2:-0.490001562896;IRF7:-0.495457324786;OCT4_SOX2{dimer}:-0.505924121605;FOXD3:-0.507735205098;PAX2:-0.511317986351;DMAP1_NCOR{1,2}_SMARC:-0.515878293646;LMO2:-0.517888252514;SREBF1,2:-0.522503276316;UFEwm:-0.52455188393;AR:-0.52685841904;HLF:-0.532085925305;ARID5B:-0.535389261397;EBF1:-0.55170421021;ZNF423:-0.573750895015;NFE2L2:-0.582655815868;ZNF384:-0.58546343138;IKZF1:-0.608207559892;NR6A1:-0.64491218166;NKX2-3_NKX2-5:-0.686130474285;HBP1_HMGB_SSRP1_UBTF:-0.702887065524;MZF1:-0.742705263981;NFIL3:-0.749730211375;PRDM1:-0.764577159959;RXRA_VDR{dimer}:-0.777949383642;XCPE1{core}:-0.806047915106;TBX4,5:-0.809737945842;TFAP4:-0.83551350686;KLF4:-0.851919621638;GZF1:-0.853114903157;TBP:-0.860124225925;GATA4:-0.875421960847;NHLH1,2:-0.887682677064;ALX1:-0.888956993879;HMX1:-0.890841501246;HOX{A5,B5}:-0.928255181644;MTF1:-0.947010554572;CDC5L:-0.955598640817;HAND1,2:-0.994508458566;NANOG{mouse}:-1.02900199565;EP300:-1.04124636261;NFIX:-1.05782657468;HMGA1,2:-1.10262030991;GTF2A1,2:-1.16292621691;TEAD1:-1.1847690354;EN1,2:-1.1863017014;NKX2-2,8:-1.19775048455;ZBTB6:-1.19960778557;GTF2I:-1.20504929641;ZNF238:-1.26855668311;FOX{D1,D2}:-1.26963644608;FOXL1:-1.30252367256;MAZ:-1.30794685899;TAL1_TCF{3,4,12}:-1.43396630346;PPARG:-1.43792692053;TFCP2:-1.49013205553;FOXO1,3,4:-1.49612892049;NR3C1:-1.51308312489;SP1:-1.54181080401;TLX1..3_NFIC{dimer}:-1.55665692089;GLI1..3:-1.57277115956;SMAD1..7,9:-1.61905357837;ALX4:-1.69054832744;SPZ1:-2.24394521222;T:-2.62617095875
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10453-106G3;search_select_hide=table117:FF:10453-106G3
}}
}}

Latest revision as of 14:03, 3 June 2020

Name:cord blood derived cell line:COBL-a 24h infection
Species:Human (Homo sapiens)
Library ID:CNhs11050
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typeunclassifiable
cell lineCOBL-a
companyNA
collaborationChieko Kai (University of Tokyo)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005000
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11050 CAGE DRX007865 DRR008737
Accession ID Hg19

Library idBAMCTSS
CNhs11050 DRZ000162 DRZ001547
Accession ID Hg38

Library idBAMCTSS
CNhs11050 DRZ011512 DRZ012897
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.555
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0506
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0506
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0296
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.00864
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.209
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.208
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0.0506
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0.833
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.187
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.088
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.532
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.00509
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0343
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0392
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.442
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.00305
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.0506
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.0999
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11050

Jaspar motifP-value
MA0002.20.219
MA0003.10.557
MA0004.10.44
MA0006.10.12
MA0007.10.113
MA0009.10.715
MA0014.10.247
MA0017.10.941
MA0018.21.18543e-5
MA0019.10.918
MA0024.14.03536e-8
MA0025.10.911
MA0027.10.567
MA0028.14.21054e-5
MA0029.10.716
MA0030.10.0441
MA0031.10.0608
MA0035.20.0682
MA0038.10.00864
MA0039.20.107
MA0040.10.0202
MA0041.10.165
MA0042.10.201
MA0043.10.0865
MA0046.10.154
MA0047.20.717
MA0048.10.0976
MA0050.10.00304
MA0051.10.0118
MA0052.10.00931
MA0055.10.0234
MA0057.10.425
MA0058.10.331
MA0059.10.0692
MA0060.11.28919e-10
MA0061.11.04911e-14
MA0062.23.0252e-7
MA0065.20.465
MA0066.10.11
MA0067.10.79
MA0068.10.209
MA0069.10.617
MA0070.10.414
MA0071.10.657
MA0072.10.601
MA0073.10.55
MA0074.10.844
MA0076.14.45981e-6
MA0077.10.745
MA0078.10.0917
MA0079.20.28
MA0080.20.84
MA0081.10.787
MA0083.10.671
MA0084.10.761
MA0087.10.205
MA0088.10.108
MA0090.13.6897e-5
MA0091.10.013
MA0092.10.217
MA0093.10.305
MA0099.20.00113
MA0100.10.122
MA0101.11.01006e-17
MA0102.20.611
MA0103.10.228
MA0104.28.34751e-4
MA0105.11.03043e-4
MA0106.10.0405
MA0107.19.54707e-23
MA0108.20.00611
MA0111.10.889
MA0112.20.0203
MA0113.10.0629
MA0114.10.402
MA0115.10.346
MA0116.10.996
MA0117.10.0355
MA0119.10.103
MA0122.10.256
MA0124.10.399
MA0125.10.202
MA0131.10.0526
MA0135.10.0197
MA0136.10.146
MA0137.20.0051
MA0138.20.133
MA0139.10.974
MA0140.10.115
MA0141.10.601
MA0142.10.304
MA0143.10.0286
MA0144.10.955
MA0145.10.00198
MA0146.10.354
MA0147.10.0013
MA0148.10.87
MA0149.10.328
MA0150.10.201
MA0152.10.217
MA0153.11.85353e-4
MA0154.10.714
MA0155.10.204
MA0156.10.035
MA0157.10.105
MA0159.10.53
MA0160.10.0427
MA0162.10.0404
MA0163.10.197
MA0164.10.748
MA0258.10.239
MA0259.10.13



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11050

Novel motifP-value
10.974
100.135
1000.183
1010.216
1020.954
1030.43
1040.752
1050.536
1060.0409
1070.0289
1080.492
1090.978
110.606
1100.177
1110.474
1120.617
1130.7
1140.237
1150.629
1160.45
1170.51
1180.423
1190.433
120.52
1200.978
1210.893
1220.276
1230.152
1240.373
1250.602
1260.935
1270.977
1280.0258
1290.393
130.215
1300.791
1310.489
1320.396
1330.975
1340.301
1350.812
1360.465
1370.503
1380.153
1390.555
140.792
1400.324
1410.245
1420.991
1430.99
1440.494
1450.434
1460.291
1470.131
1480.222
1490.00691
150.708
1500.465
1510.319
1520.0794
1530.209
1540.788
1550.403
1560.681
1570.938
1580.998
1590.485
160.281
1600.35
1610.54
1620.153
1630.56
1640.711
1650.84
1660.81
1670.142
1680.549
1690.0292
170.339
180.731
190.0241
20.119
200.146
210.0244
220.0687
230.0171
240.221
250.55
260.682
270.285
280.63
290.487
30.588
300.0306
310.251
320.0319
330.861
340.226
350.789
360.0649
370.641
380.512
390.155
40.194
400.959
410.23
420.464
430.437
440.957
450.0705
460.595
470.955
480.859
490.706
50.162
500.731
510.625
520.0993
530.662
540.226
556.232e-4
560.792
570.971
580.709
590.148
60.974
600.234
610.58
620.965
630.385
640.692
650.246
660.0365
670.161
680.122
690.0524
70.748
700.123
710.495
720.271
730.123
740.494
750.769
760.268
770.00413
780.32
790.0223
80.489
800.377
810.571
820.106
830.262
840.358
850.0208
860.787
870.351
880.455
890.0224
90.18
900.886
910.478
920.234
930.634
940.979
950.467
960.797
970.0419
980.138
990.115



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11050


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000080 (circulating cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000178 (blood)
0002331 (umbilical cord)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000478 (extraembryonic structure)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0101035 (hematopoietic cell line sample)
0104053 (umbilical cord blood sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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