FF:10693-109F9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005995 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008001;DRR008873;DRZ000298;DRZ001683;DRZ011648;DRZ013033 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000483,UBERON:0000991,UBERON:0003134,UBERON:0004911,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0004909,UBERON:0003100,UBERON:0000474 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000151,CL:0000066,CL:0000159,CL:0000255,CL:0000313 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:0050687,DOID:193,DOID:305,DOID:2394,DOID:120,DOID:299,DOID:2152 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0100167,FF:0100977,FF:0100811,FF:0104883,FF:0104511 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0100977,FF:0101120 | |fonse_cell_line=FF:0100977,FF:0101120 | ||
|fonse_cell_line_closure=FF:0100977,FF:0101120 | |fonse_cell_line_closure=FF:0100977,FF:0101120 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/serous%2520cystadenocarcinoma%2520cell%2520line%253aHTOA.CNhs11827.10693-109F9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/serous%2520cystadenocarcinoma%2520cell%2520line%253aHTOA.CNhs11827.10693-109F9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/serous%2520cystadenocarcinoma%2520cell%2520line%253aHTOA.CNhs11827.10693-109F9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/serous%2520cystadenocarcinoma%2520cell%2520line%253aHTOA.CNhs11827.10693-109F9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/serous%2520cystadenocarcinoma%2520cell%2520line%253aHTOA.CNhs11827.10693-109F9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10693-109F9 | |id=FF:10693-109F9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0104511 | ||
|is_obsolete= | |||
|library_id=CNhs11827 | |||
|library_id_phase_based=2:CNhs11827 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10693 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10693 | |||
|name=serous cystadenocarcinoma cell line:HTOA | |name=serous cystadenocarcinoma cell line:HTOA | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11827,LSID829,release010,COMPLETED | |profile_hcage=CNhs11827,LSID829,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=109 | |rna_box=109 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=94.09541 | |rna_weight_ug=94.09541 | ||
|sample_age=50 | |sample_age=50 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB0692 | |sample_cell_catalog=RCB0692 | ||
|sample_cell_line=HTOA | |sample_cell_line=HTOA | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=J | |sample_ethnicity=J | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.36069689505695e-229!GO:0043231;intracellular membrane-bound organelle;2.40728980572077e-188!GO:0043227;membrane-bound organelle;2.74770161810004e-188!GO:0043226;organelle;3.05062174197154e-187!GO:0043229;intracellular organelle;6.25631266991821e-187!GO:0005737;cytoplasm;5.5519804349689e-172!GO:0044422;organelle part;3.32279623424582e-129!GO:0044446;intracellular organelle part;1.21806437580168e-127!GO:0044444;cytoplasmic part;4.67011219837686e-121!GO:0032991;macromolecular complex;1.25593359298847e-85!GO:0044237;cellular metabolic process;6.23331799439429e-85!GO:0044238;primary metabolic process;9.394384695681e-84!GO:0043170;macromolecule metabolic process;2.34166061379907e-80!GO:0030529;ribonucleoprotein complex;8.97388564646839e-79!GO:0005634;nucleus;1.45139525431785e-73!GO:0043233;organelle lumen;4.11335230035981e-70!GO:0031974;membrane-enclosed lumen;4.11335230035981e-70!GO:0044428;nuclear part;5.09475932548296e-69!GO:0003723;RNA binding;1.11492790148436e-67!GO:0005515;protein binding;1.10039643842445e-64!GO:0005739;mitochondrion;2.36925172156257e-63!GO:0006396;RNA processing;1.66648934660298e-49!GO:0031090;organelle membrane;8.50037086285843e-48!GO:0019538;protein metabolic process;4.76468195589738e-47!GO:0043283;biopolymer metabolic process;5.87039036617275e-47!GO:0005840;ribosome;5.7286365847888e-45!GO:0031981;nuclear lumen;1.67394455297067e-44!GO:0015031;protein transport;2.42292966850371e-43!GO:0010467;gene expression;3.01176117050338e-43!GO:0006412;translation;6.34818762334612e-43!GO:0033036;macromolecule localization;7.25899244864335e-43!GO:0044260;cellular macromolecule metabolic process;3.57221373839471e-42!GO:0044267;cellular protein metabolic process;4.40945382407105e-42!GO:0043234;protein complex;1.24679702842765e-41!GO:0016043;cellular component organization and biogenesis;8.15382115790872e-41!GO:0044429;mitochondrial part;2.87793661934222e-39!GO:0008104;protein localization;3.40768357072964e-39!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.25241181658735e-38!GO:0003735;structural constituent of ribosome;3.84793982427916e-38!GO:0045184;establishment of protein localization;5.59001792736777e-38!GO:0016071;mRNA metabolic process;9.16942840823525e-38!GO:0009058;biosynthetic process;5.66684803658193e-37!GO:0008380;RNA splicing;2.56831931903263e-36!GO:0046907;intracellular transport;1.52605401886769e-35!GO:0031967;organelle envelope;4.44181581697746e-35!GO:0031975;envelope;9.95979507905821e-35!GO:0033279;ribosomal subunit;5.79304287191594e-34!GO:0044249;cellular biosynthetic process;6.17220007386545e-34!GO:0009059;macromolecule biosynthetic process;2.31947160802378e-33!GO:0006397;mRNA processing;2.53783563881922e-32!GO:0005829;cytosol;1.81181298661563e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.5362428462226e-30!GO:0065003;macromolecular complex assembly;1.01553718366505e-29!GO:0006886;intracellular protein transport;4.29117107701279e-27!GO:0005654;nucleoplasm;4.80447602518953e-27!GO:0043228;non-membrane-bound organelle;7.00868766373482e-27!GO:0043232;intracellular non-membrane-bound organelle;7.00868766373482e-27!GO:0006996;organelle organization and biogenesis;1.32054881903339e-26!GO:0022607;cellular component assembly;1.49517529569694e-26!GO:0005681;spliceosome;4.96371690655667e-26!GO:0005740;mitochondrial envelope;3.99747972064347e-25!GO:0019866;organelle inner membrane;2.05934189974812e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.69845315547011e-23!GO:0031966;mitochondrial membrane;4.44742661345486e-23!GO:0003676;nucleic acid binding;1.14070669307903e-22!GO:0005743;mitochondrial inner membrane;2.11831648893787e-22!GO:0044451;nucleoplasm part;3.00571234985934e-22!GO:0016070;RNA metabolic process;8.00356745422158e-22!GO:0051649;establishment of cellular localization;1.19812743661103e-21!GO:0051641;cellular localization;2.63565177167444e-21!GO:0000166;nucleotide binding;6.46460674115901e-21!GO:0006259;DNA metabolic process;1.10998130986972e-20!GO:0044265;cellular macromolecule catabolic process;7.57642671414995e-20!GO:0016874;ligase activity;7.68554496252428e-20!GO:0012505;endomembrane system;1.60174206621127e-19!GO:0016462;pyrophosphatase activity;5.96038643247014e-19!GO:0005730;nucleolus;5.96038643247014e-19!GO:0006119;oxidative phosphorylation;8.76853688213103e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.47157627933927e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;9.76938419695046e-19!GO:0017111;nucleoside-triphosphatase activity;2.01189783823855e-18!GO:0006512;ubiquitin cycle;2.13279499976979e-18!GO:0006457;protein folding;2.23615683888748e-18!GO:0043285;biopolymer catabolic process;2.39754317754604e-18!GO:0008134;transcription factor binding;3.96074994743908e-18!GO:0031980;mitochondrial lumen;7.14524754081894e-18!GO:0005759;mitochondrial matrix;7.14524754081894e-18!GO:0009057;macromolecule catabolic process;7.54877592400234e-18!GO:0015935;small ribosomal subunit;8.19536373008451e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;9.05016124786034e-18!GO:0044445;cytosolic part;9.20235417157371e-18!GO:0019941;modification-dependent protein catabolic process;1.94892456805916e-17!GO:0043632;modification-dependent macromolecule catabolic process;1.94892456805916e-17!GO:0015934;large ribosomal subunit;2.73247417702691e-17!GO:0044257;cellular protein catabolic process;3.13422979451098e-17!GO:0022618;protein-RNA complex assembly;4.31631606245176e-17!GO:0006511;ubiquitin-dependent protein catabolic process;4.61201542222857e-17!GO:0005794;Golgi apparatus;3.43518015752853e-16!GO:0044455;mitochondrial membrane part;3.47411489643638e-16!GO:0044248;cellular catabolic process;5.38856510234981e-16!GO:0007049;cell cycle;6.48280522090766e-16!GO:0051186;cofactor metabolic process;1.43701875290752e-15!GO:0030163;protein catabolic process;1.88948566738058e-15!GO:0048770;pigment granule;4.89118602391936e-15!GO:0042470;melanosome;4.89118602391936e-15!GO:0008135;translation factor activity, nucleic acid binding;5.22443840475498e-15!GO:0043412;biopolymer modification;7.96644829844747e-15!GO:0032553;ribonucleotide binding;1.36437684637803e-14!GO:0032555;purine ribonucleotide binding;1.36437684637803e-14!GO:0005783;endoplasmic reticulum;2.51350007625387e-14!GO:0017076;purine nucleotide binding;3.28093221173206e-14!GO:0048193;Golgi vesicle transport;1.63436298465073e-13!GO:0044432;endoplasmic reticulum part;1.73671890356225e-13!GO:0000502;proteasome complex (sensu Eukaryota);1.82940384622336e-13!GO:0006605;protein targeting;1.98141168593945e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.00779392293034e-13!GO:0042254;ribosome biogenesis and assembly;2.33256192900879e-13!GO:0051082;unfolded protein binding;2.40281898581156e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;2.40920662623126e-13!GO:0000375;RNA splicing, via transesterification reactions;2.40920662623126e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.40920662623126e-13!GO:0005761;mitochondrial ribosome;3.98799408658059e-13!GO:0000313;organellar ribosome;3.98799408658059e-13!GO:0006464;protein modification process;6.71509344064277e-13!GO:0050136;NADH dehydrogenase (quinone) activity;8.81256971887809e-13!GO:0003954;NADH dehydrogenase activity;8.81256971887809e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.81256971887809e-13!GO:0006732;coenzyme metabolic process;1.18274711944978e-12!GO:0016192;vesicle-mediated transport;1.34482892954787e-12!GO:0005524;ATP binding;2.29042400640496e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.00025826873138e-12!GO:0005746;mitochondrial respiratory chain;3.42054521558754e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.14669155200548e-12!GO:0006974;response to DNA damage stimulus;5.79780885098476e-12!GO:0016604;nuclear body;6.97489477893365e-12!GO:0032559;adenyl ribonucleotide binding;8.56728064141228e-12!GO:0030554;adenyl nucleotide binding;2.66563116747107e-11!GO:0016887;ATPase activity;3.09396625067532e-11!GO:0003712;transcription cofactor activity;3.27618411567742e-11!GO:0005635;nuclear envelope;3.85248819761492e-11!GO:0042623;ATPase activity, coupled;4.17912857506071e-11!GO:0003743;translation initiation factor activity;4.55863498512487e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.97537532581072e-11!GO:0030964;NADH dehydrogenase complex (quinone);7.11182161130598e-11!GO:0045271;respiratory chain complex I;7.11182161130598e-11!GO:0005747;mitochondrial respiratory chain complex I;7.11182161130598e-11!GO:0031965;nuclear membrane;7.21749880293259e-11!GO:0043687;post-translational protein modification;8.29737153934676e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.25090517302256e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.29467915447095e-10!GO:0022402;cell cycle process;1.30462303259945e-10!GO:0008565;protein transporter activity;1.48675327911931e-10!GO:0008639;small protein conjugating enzyme activity;2.28008471336236e-10!GO:0012501;programmed cell death;2.32969342330949e-10!GO:0006399;tRNA metabolic process;2.69218687783731e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;2.76140440957337e-10!GO:0006413;translational initiation;2.77283556626506e-10!GO:0006446;regulation of translational initiation;2.77283556626506e-10!GO:0006915;apoptosis;3.04755297347653e-10!GO:0019787;small conjugating protein ligase activity;3.08030010980232e-10!GO:0004842;ubiquitin-protein ligase activity;3.93503033545011e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.7365449915956e-10!GO:0006366;transcription from RNA polymerase II promoter;5.81209079880239e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.4562103559301e-10!GO:0005789;endoplasmic reticulum membrane;6.46598241304811e-10!GO:0016607;nuclear speck;8.8556031311455e-10!GO:0006323;DNA packaging;9.83822747796105e-10!GO:0042775;organelle ATP synthesis coupled electron transport;1.17805171818112e-09!GO:0042773;ATP synthesis coupled electron transport;1.17805171818112e-09!GO:0009056;catabolic process;1.32266103110343e-09!GO:0006461;protein complex assembly;1.36894719717713e-09!GO:0051276;chromosome organization and biogenesis;1.39174246227982e-09!GO:0009055;electron carrier activity;1.43466737720094e-09!GO:0044453;nuclear membrane part;1.49200532641496e-09!GO:0006281;DNA repair;2.95946268894303e-09!GO:0004386;helicase activity;3.29258428949641e-09!GO:0016881;acid-amino acid ligase activity;4.27841701028717e-09!GO:0008219;cell death;5.47883239669253e-09!GO:0016265;death;5.47883239669253e-09!GO:0006913;nucleocytoplasmic transport;5.71199094933084e-09!GO:0016072;rRNA metabolic process;5.75563567054477e-09!GO:0006364;rRNA processing;6.36200568218607e-09!GO:0051188;cofactor biosynthetic process;6.98704805324139e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.89409161881928e-09!GO:0005643;nuclear pore;9.68166749199206e-09!GO:0006163;purine nucleotide metabolic process;1.00260395216589e-08!GO:0009259;ribonucleotide metabolic process;1.15138798771587e-08!GO:0005793;ER-Golgi intermediate compartment;1.29667094893521e-08!GO:0008026;ATP-dependent helicase activity;1.34520329555477e-08!GO:0051169;nuclear transport;1.37699944992719e-08!GO:0015986;ATP synthesis coupled proton transport;1.47694048028635e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.47694048028635e-08!GO:0006403;RNA localization;2.0855114317882e-08!GO:0016568;chromatin modification;2.14793272322642e-08!GO:0009150;purine ribonucleotide metabolic process;2.40978211258199e-08!GO:0050794;regulation of cellular process;2.46764395533071e-08!GO:0032446;protein modification by small protein conjugation;2.77968902848023e-08!GO:0009141;nucleoside triphosphate metabolic process;2.98612024774572e-08!GO:0050657;nucleic acid transport;3.11968214220347e-08!GO:0051236;establishment of RNA localization;3.11968214220347e-08!GO:0050658;RNA transport;3.11968214220347e-08!GO:0030532;small nuclear ribonucleoprotein complex;3.50991208897813e-08!GO:0009719;response to endogenous stimulus;3.64197992965837e-08!GO:0065002;intracellular protein transport across a membrane;4.43193620907042e-08!GO:0016567;protein ubiquitination;4.53963707614182e-08!GO:0005694;chromosome;5.34626208814291e-08!GO:0009199;ribonucleoside triphosphate metabolic process;5.35476349410151e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.84219181970616e-08!GO:0009144;purine nucleoside triphosphate metabolic process;6.84219181970616e-08!GO:0005768;endosome;6.85588008663267e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.88236359218716e-08!GO:0004812;aminoacyl-tRNA ligase activity;6.88236359218716e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.88236359218716e-08!GO:0007005;mitochondrion organization and biogenesis;8.39497472080945e-08!GO:0046034;ATP metabolic process;8.67228106760124e-08!GO:0000278;mitotic cell cycle;8.72218843336487e-08!GO:0006164;purine nucleotide biosynthetic process;8.72387776339732e-08!GO:0048475;coated membrane;1.09536501870157e-07!GO:0030117;membrane coat;1.09536501870157e-07!GO:0019829;cation-transporting ATPase activity;1.36055300090846e-07!GO:0009108;coenzyme biosynthetic process;1.60379902949655e-07!GO:0044431;Golgi apparatus part;1.68507473802442e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.94740910866109e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.06539939426104e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.06539939426104e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.11293313187962e-07!GO:0009260;ribonucleotide biosynthetic process;2.25058146933131e-07!GO:0043038;amino acid activation;2.29621912647451e-07!GO:0006418;tRNA aminoacylation for protein translation;2.29621912647451e-07!GO:0043039;tRNA aminoacylation;2.29621912647451e-07!GO:0006754;ATP biosynthetic process;2.52799593288931e-07!GO:0006753;nucleoside phosphate metabolic process;2.52799593288931e-07!GO:0006916;anti-apoptosis;2.56594833576406e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.57243521669344e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.57243521669344e-07!GO:0006260;DNA replication;2.57634427125395e-07!GO:0017038;protein import;3.04918793911944e-07!GO:0000074;regulation of progression through cell cycle;3.23026076757435e-07!GO:0030120;vesicle coat;3.32489745211618e-07!GO:0030662;coated vesicle membrane;3.32489745211618e-07!GO:0042981;regulation of apoptosis;3.39937705910609e-07!GO:0051726;regulation of cell cycle;3.53825131088939e-07!GO:0043069;negative regulation of programmed cell death;4.23372319571426e-07!GO:0046930;pore complex;4.49629861568965e-07!GO:0043067;regulation of programmed cell death;4.56535327555702e-07!GO:0006752;group transfer coenzyme metabolic process;4.68646316775062e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.97997983616769e-07!GO:0043066;negative regulation of apoptosis;5.66292786862111e-07!GO:0000151;ubiquitin ligase complex;5.77215727667449e-07!GO:0005773;vacuole;5.86181684531265e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.57839137745082e-07!GO:0015630;microtubule cytoskeleton;7.23041157309801e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.4836549157189e-07!GO:0006333;chromatin assembly or disassembly;8.58575454801095e-07!GO:0065004;protein-DNA complex assembly;9.46396828479579e-07!GO:0003713;transcription coactivator activity;9.90734970092305e-07!GO:0016740;transferase activity;1.09564650806166e-06!GO:0051028;mRNA transport;1.15113408463665e-06!GO:0000245;spliceosome assembly;1.31445777139287e-06!GO:0048523;negative regulation of cellular process;1.32199703480386e-06!GO:0044427;chromosomal part;1.42102083630226e-06!GO:0008654;phospholipid biosynthetic process;1.46873455990121e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.74460871123129e-06!GO:0006099;tricarboxylic acid cycle;1.80658488811899e-06!GO:0046356;acetyl-CoA catabolic process;1.80658488811899e-06!GO:0005667;transcription factor complex;1.83458507930739e-06!GO:0043623;cellular protein complex assembly;2.07004931297589e-06!GO:0051427;hormone receptor binding;2.7709860107465e-06!GO:0006084;acetyl-CoA metabolic process;3.02236119861936e-06!GO:0043566;structure-specific DNA binding;3.02819484449638e-06!GO:0016563;transcription activator activity;3.29237097641923e-06!GO:0016787;hydrolase activity;3.63982285775354e-06!GO:0022403;cell cycle phase;4.46352536948284e-06!GO:0044440;endosomal part;5.53608238827881e-06!GO:0010008;endosome membrane;5.53608238827881e-06!GO:0000785;chromatin;6.3434221938026e-06!GO:0003697;single-stranded DNA binding;6.35327581049255e-06!GO:0035257;nuclear hormone receptor binding;6.37157821887201e-06!GO:0015078;hydrogen ion transmembrane transporter activity;8.54371862509465e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.92113772836418e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;9.08683745950092e-06!GO:0051187;cofactor catabolic process;9.8226594977484e-06!GO:0009060;aerobic respiration;1.01485308831046e-05!GO:0045259;proton-transporting ATP synthase complex;1.15509000189185e-05!GO:0051301;cell division;1.23078017120843e-05!GO:0003924;GTPase activity;1.23275249102507e-05!GO:0007264;small GTPase mediated signal transduction;1.25106277188431e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.3062900412229e-05!GO:0009109;coenzyme catabolic process;1.34578865533566e-05!GO:0000323;lytic vacuole;1.43559988684675e-05!GO:0005764;lysosome;1.43559988684675e-05!GO:0000139;Golgi membrane;1.43559988684675e-05!GO:0003724;RNA helicase activity;1.79121852357546e-05!GO:0009117;nucleotide metabolic process;1.8042790053546e-05!GO:0045333;cellular respiration;1.91999464808755e-05!GO:0048519;negative regulation of biological process;2.12344341666844e-05!GO:0006613;cotranslational protein targeting to membrane;2.23395222363038e-05!GO:0005525;GTP binding;3.20453234886051e-05!GO:0006793;phosphorus metabolic process;3.73756121088841e-05!GO:0006796;phosphate metabolic process;3.73756121088841e-05!GO:0045454;cell redox homeostasis;4.21487429732451e-05!GO:0005788;endoplasmic reticulum lumen;4.27906379774129e-05!GO:0000087;M phase of mitotic cell cycle;4.44329133285851e-05!GO:0004298;threonine endopeptidase activity;4.47918965567923e-05!GO:0016779;nucleotidyltransferase activity;4.82405146242539e-05!GO:0003899;DNA-directed RNA polymerase activity;4.94027794222083e-05!GO:0019222;regulation of metabolic process;5.12413613616216e-05!GO:0005769;early endosome;5.22497170460877e-05!GO:0051246;regulation of protein metabolic process;5.34545542510984e-05!GO:0007067;mitosis;5.46308403617009e-05!GO:0005770;late endosome;5.53843419171644e-05!GO:0016491;oxidoreductase activity;5.9401691342786e-05!GO:0005762;mitochondrial large ribosomal subunit;7.03059325995851e-05!GO:0000315;organellar large ribosomal subunit;7.03059325995851e-05!GO:0043021;ribonucleoprotein binding;7.56362689243203e-05!GO:0051170;nuclear import;8.8074171449689e-05!GO:0006839;mitochondrial transport;9.80483105035245e-05!GO:0050789;regulation of biological process;9.91699840148308e-05!GO:0005798;Golgi-associated vesicle;0.000107387085047515!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000124581390374618!GO:0003714;transcription corepressor activity;0.000141449604879877!GO:0016564;transcription repressor activity;0.000144203468113129!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000144637793030956!GO:0003729;mRNA binding;0.000145992910497256!GO:0042802;identical protein binding;0.000146712469438553!GO:0031324;negative regulation of cellular metabolic process;0.000148673558559057!GO:0000314;organellar small ribosomal subunit;0.000149373154637957!GO:0005763;mitochondrial small ribosomal subunit;0.000149373154637957!GO:0030880;RNA polymerase complex;0.000164962474861602!GO:0033116;ER-Golgi intermediate compartment membrane;0.000164962474861602!GO:0006414;translational elongation;0.000207918165453273!GO:0006606;protein import into nucleus;0.000209849513220293!GO:0006261;DNA-dependent DNA replication;0.000221084185189023!GO:0051789;response to protein stimulus;0.000221084185189023!GO:0006986;response to unfolded protein;0.000221084185189023!GO:0006352;transcription initiation;0.000240583392124128!GO:0016853;isomerase activity;0.000258392774699989!GO:0044452;nucleolar part;0.00026695454316209!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000270069724728533!GO:0008186;RNA-dependent ATPase activity;0.000288913628382628!GO:0006520;amino acid metabolic process;0.000295462619482604!GO:0008033;tRNA processing;0.000309858504160657!GO:0045786;negative regulation of progression through cell cycle;0.000318829180720446!GO:0006402;mRNA catabolic process;0.000324025667645301!GO:0016310;phosphorylation;0.000330131034693095!GO:0031988;membrane-bound vesicle;0.000336001170854237!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000346603412415035!GO:0016023;cytoplasmic membrane-bound vesicle;0.000369642646207821!GO:0030118;clathrin coat;0.000373415936180567!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000419093602236832!GO:0000428;DNA-directed RNA polymerase complex;0.000419093602236832!GO:0031982;vesicle;0.000429790504992604!GO:0008250;oligosaccharyl transferase complex;0.000433764825250773!GO:0048471;perinuclear region of cytoplasm;0.000448653810013856!GO:0046474;glycerophospholipid biosynthetic process;0.000461271641425564!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000514067206628771!GO:0006091;generation of precursor metabolites and energy;0.00051588887195924!GO:0019899;enzyme binding;0.000542620797040439!GO:0000279;M phase;0.000543253932298861!GO:0016197;endosome transport;0.000554343162822118!GO:0051325;interphase;0.000556358268047617!GO:0031252;leading edge;0.000558364228048668!GO:0031410;cytoplasmic vesicle;0.00056115633844989!GO:0046467;membrane lipid biosynthetic process;0.000584103380216393!GO:0005815;microtubule organizing center;0.000600729397238787!GO:0051168;nuclear export;0.000630308486503408!GO:0032561;guanyl ribonucleotide binding;0.000678142066747176!GO:0019001;guanyl nucleotide binding;0.000678142066747176!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000682649456745938!GO:0015399;primary active transmembrane transporter activity;0.000682649456745938!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000696997111918609!GO:0005874;microtubule;0.000699404201710973!GO:0051329;interphase of mitotic cell cycle;0.000699404201710973!GO:0030867;rough endoplasmic reticulum membrane;0.000714263003738916!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000759496219671367!GO:0005048;signal sequence binding;0.0007814481592066!GO:0006082;organic acid metabolic process;0.000804140788808535!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000826961496230646!GO:0004004;ATP-dependent RNA helicase activity;0.000850800570683559!GO:0031323;regulation of cellular metabolic process;0.000943735701815375!GO:0004576;oligosaccharyl transferase activity;0.000965582950781868!GO:0019752;carboxylic acid metabolic process;0.000967859095299197!GO:0006401;RNA catabolic process;0.000967859095299197!GO:0046983;protein dimerization activity;0.00108176588264739!GO:0044262;cellular carbohydrate metabolic process;0.00110385733307856!GO:0009892;negative regulation of metabolic process;0.00112014801523996!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00114234190944861!GO:0006612;protein targeting to membrane;0.00114622030022741!GO:0046489;phosphoinositide biosynthetic process;0.00115634640931389!GO:0016126;sterol biosynthetic process;0.00115634640931389!GO:0016363;nuclear matrix;0.00116059712649139!GO:0006350;transcription;0.00116735957736754!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00118527181132095!GO:0006383;transcription from RNA polymerase III promoter;0.00119080477817062!GO:0000049;tRNA binding;0.00119105576689976!GO:0035258;steroid hormone receptor binding;0.00127436390303666!GO:0003690;double-stranded DNA binding;0.00133015780117252!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00134261859466636!GO:0008168;methyltransferase activity;0.00149365958012206!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00155050541318479!GO:0008632;apoptotic program;0.00156460702466605!GO:0030521;androgen receptor signaling pathway;0.00156473355175123!GO:0043681;protein import into mitochondrion;0.00156823625599694!GO:0006626;protein targeting to mitochondrion;0.0015873893556843!GO:0016741;transferase activity, transferring one-carbon groups;0.00170733166025574!GO:0018196;peptidyl-asparagine modification;0.00176078041324645!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00176078041324645!GO:0005813;centrosome;0.00176274303989222!GO:0031497;chromatin assembly;0.00180470722900275!GO:0030119;AP-type membrane coat adaptor complex;0.00180722466458001!GO:0030658;transport vesicle membrane;0.00181639511234468!GO:0051920;peroxiredoxin activity;0.00198370483509258!GO:0005885;Arp2/3 protein complex;0.00202380076118812!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00204851471648209!GO:0051252;regulation of RNA metabolic process;0.00208474400278391!GO:0005774;vacuolar membrane;0.00219066917717787!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0021941881342274!GO:0030131;clathrin adaptor complex;0.0022696148514494!GO:0016859;cis-trans isomerase activity;0.00229841170293802!GO:0007006;mitochondrial membrane organization and biogenesis;0.00239514708201032!GO:0051087;chaperone binding;0.00245952404646103!GO:0006891;intra-Golgi vesicle-mediated transport;0.0025359806575596!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00253928254419841!GO:0007243;protein kinase cascade;0.00258420271766818!GO:0016481;negative regulation of transcription;0.00260753541081261!GO:0000059;protein import into nucleus, docking;0.00269243371997114!GO:0005905;coated pit;0.00275301274695197!GO:0006334;nucleosome assembly;0.00286077879623957!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00294758263698783!GO:0045893;positive regulation of transcription, DNA-dependent;0.00309507523679415!GO:0048487;beta-tubulin binding;0.00311698336939047!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00315830235460409!GO:0005684;U2-dependent spliceosome;0.00325508875250885!GO:0048500;signal recognition particle;0.00329519006076666!GO:0065009;regulation of a molecular function;0.00329778909320473!GO:0045941;positive regulation of transcription;0.0034281505773141!GO:0006818;hydrogen transport;0.00344786320304409!GO:0031072;heat shock protein binding;0.00347470006961213!GO:0015992;proton transport;0.00350255657048863!GO:0030660;Golgi-associated vesicle membrane;0.00359127279660562!GO:0046483;heterocycle metabolic process;0.00370535552523194!GO:0006695;cholesterol biosynthetic process;0.00373310911011836!GO:0006740;NADPH regeneration;0.00374462445489284!GO:0006098;pentose-phosphate shunt;0.00374462445489284!GO:0007265;Ras protein signal transduction;0.00381033628088929!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00387935129653941!GO:0016251;general RNA polymerase II transcription factor activity;0.00396685426453124!GO:0004680;casein kinase activity;0.00422880297579961!GO:0016044;membrane organization and biogenesis;0.00434910075340745!GO:0030031;cell projection biogenesis;0.004358654765194!GO:0030134;ER to Golgi transport vesicle;0.00448642516351985!GO:0015980;energy derivation by oxidation of organic compounds;0.00465758203165079!GO:0003746;translation elongation factor activity;0.00469342755467455!GO:0043488;regulation of mRNA stability;0.00469342755467455!GO:0043487;regulation of RNA stability;0.00469342755467455!GO:0003682;chromatin binding;0.0048828986288672!GO:0006509;membrane protein ectodomain proteolysis;0.00506223718751213!GO:0033619;membrane protein proteolysis;0.00506223718751213!GO:0051881;regulation of mitochondrial membrane potential;0.00512397343819047!GO:0043284;biopolymer biosynthetic process;0.0053589067287666!GO:0043492;ATPase activity, coupled to movement of substances;0.0053929486413156!GO:0005637;nuclear inner membrane;0.00543640850020594!GO:0030659;cytoplasmic vesicle membrane;0.00547352962864206!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00550322173704268!GO:0030133;transport vesicle;0.00556458236954408!GO:0019843;rRNA binding;0.00575393681751368!GO:0031901;early endosome membrane;0.00575393681751368!GO:0001836;release of cytochrome c from mitochondria;0.00575946743631278!GO:0044437;vacuolar part;0.0058684643389034!GO:0003711;transcription elongation regulator activity;0.005953137513839!GO:0008022;protein C-terminus binding;0.00610018219880722!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00619276295092203!GO:0008652;amino acid biosynthetic process;0.00619276295092203!GO:0030663;COPI coated vesicle membrane;0.00619276295092203!GO:0030126;COPI vesicle coat;0.00619276295092203!GO:0006338;chromatin remodeling;0.00623371146250504!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00623753001440044!GO:0030132;clathrin coat of coated pit;0.00661411292599257!GO:0016272;prefoldin complex;0.00666315273905691!GO:0030036;actin cytoskeleton organization and biogenesis;0.00672573432422951!GO:0008092;cytoskeletal protein binding;0.0067949230393464!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00683202356951587!GO:0030176;integral to endoplasmic reticulum membrane;0.00697856879270508!GO:0010468;regulation of gene expression;0.00705855711975842!GO:0008610;lipid biosynthetic process;0.00755031281009735!GO:0000096;sulfur amino acid metabolic process;0.00765893825697284!GO:0006807;nitrogen compound metabolic process;0.00774712284573198!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00805669873239618!GO:0006650;glycerophospholipid metabolic process;0.00833903546715999!GO:0006405;RNA export from nucleus;0.00843605251408207!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00847544404705152!GO:0045047;protein targeting to ER;0.00847544404705152!GO:0006302;double-strand break repair;0.00878415568322692!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00906129758557442!GO:0043022;ribosome binding;0.00930796575329091!GO:0044433;cytoplasmic vesicle part;0.00978625074228534!GO:0030518;steroid hormone receptor signaling pathway;0.00979959949803998!GO:0051540;metal cluster binding;0.00979959949803998!GO:0051536;iron-sulfur cluster binding;0.00979959949803998!GO:0030127;COPII vesicle coat;0.0098680820749145!GO:0012507;ER to Golgi transport vesicle membrane;0.0098680820749145!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0101050426551967!GO:0008637;apoptotic mitochondrial changes;0.0101312163530934!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0104982001125662!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0104982001125662!GO:0030125;clathrin vesicle coat;0.0105646015791569!GO:0030665;clathrin coated vesicle membrane;0.0105646015791569!GO:0008312;7S RNA binding;0.0108146265607929!GO:0050811;GABA receptor binding;0.011072101835456!GO:0005657;replication fork;0.011072101835456!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0113071884865645!GO:0005791;rough endoplasmic reticulum;0.0113332271909798!GO:0006506;GPI anchor biosynthetic process;0.0113379991555981!GO:0030137;COPI-coated vesicle;0.0119892450483103!GO:0006497;protein amino acid lipidation;0.0120257456647832!GO:0008361;regulation of cell size;0.0120799393080815!GO:0051098;regulation of binding;0.0122946364797574!GO:0009308;amine metabolic process;0.0123148320680274!GO:0032774;RNA biosynthetic process;0.0123148320680274!GO:0009112;nucleobase metabolic process;0.0123148320680274!GO:0007010;cytoskeleton organization and biogenesis;0.0124197072600484!GO:0004674;protein serine/threonine kinase activity;0.0125362088876901!GO:0016408;C-acyltransferase activity;0.0125954579457604!GO:0006351;transcription, DNA-dependent;0.0131989028843222!GO:0031902;late endosome membrane;0.0132809190924449!GO:0046519;sphingoid metabolic process;0.0134355341880082!GO:0006516;glycoprotein catabolic process;0.0135930566306798!GO:0016049;cell growth;0.0139008147608421!GO:0003684;damaged DNA binding;0.0140825192934331!GO:0003702;RNA polymerase II transcription factor activity;0.0146866664107757!GO:0045045;secretory pathway;0.0147142004986222!GO:0005832;chaperonin-containing T-complex;0.0151177099763506!GO:0005765;lysosomal membrane;0.0152169213331609!GO:0050662;coenzyme binding;0.0152169213331609!GO:0009165;nucleotide biosynthetic process;0.0153666752823751!GO:0008234;cysteine-type peptidase activity;0.0153800928535231!GO:0005996;monosaccharide metabolic process;0.0156799340343745!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0156799340343745!GO:0012506;vesicle membrane;0.01577452090184!GO:0003678;DNA helicase activity;0.0159539964233251!GO:0022890;inorganic cation transmembrane transporter activity;0.0161293694206144!GO:0015631;tubulin binding;0.0161838602914036!GO:0008094;DNA-dependent ATPase activity;0.0162430912701393!GO:0048522;positive regulation of cellular process;0.0164834588121958!GO:0051539;4 iron, 4 sulfur cluster binding;0.01648943329284!GO:0019318;hexose metabolic process;0.016887746004057!GO:0006672;ceramide metabolic process;0.0170654094467995!GO:0051052;regulation of DNA metabolic process;0.0170807122405942!GO:0006519;amino acid and derivative metabolic process;0.0171598415794417!GO:0000123;histone acetyltransferase complex;0.0172978092932297!GO:0007017;microtubule-based process;0.0174791775347727!GO:0032508;DNA duplex unwinding;0.0174791775347727!GO:0032392;DNA geometric change;0.0174791775347727!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0176948692485258!GO:0006376;mRNA splice site selection;0.0177880061119129!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0177880061119129!GO:0009081;branched chain family amino acid metabolic process;0.017812101563874!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0178189342292928!GO:0046966;thyroid hormone receptor binding;0.0180684485484402!GO:0032905;transforming growth factor-beta1 production;0.0182461025518896!GO:0032914;positive regulation of transforming growth factor-beta1 production;0.0182461025518896!GO:0032908;regulation of transforming growth factor-beta1 production;0.0182461025518896!GO:0048468;cell development;0.0188020503787134!GO:0006767;water-soluble vitamin metabolic process;0.0188453991045876!GO:0001558;regulation of cell growth;0.0189472045658451!GO:0050681;androgen receptor binding;0.0192491937593496!GO:0007040;lysosome organization and biogenesis;0.0194190061697125!GO:0030029;actin filament-based process;0.0199751229285722!GO:0008538;proteasome activator activity;0.0204715705099518!GO:0008139;nuclear localization sequence binding;0.0205505154356092!GO:0031625;ubiquitin protein ligase binding;0.0208953080135983!GO:0000209;protein polyubiquitination;0.0209337063708261!GO:0042982;amyloid precursor protein metabolic process;0.0219403729054354!GO:0006360;transcription from RNA polymerase I promoter;0.0219403729054354!GO:0006611;protein export from nucleus;0.0222878485233361!GO:0016407;acetyltransferase activity;0.0223208034587407!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.02244971850199!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0226794473185658!GO:0015002;heme-copper terminal oxidase activity;0.0226794473185658!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0226794473185658!GO:0004129;cytochrome-c oxidase activity;0.0226794473185658!GO:0005819;spindle;0.0234642724381089!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0237151910360767!GO:0004784;superoxide dismutase activity;0.0237151910360767!GO:0009119;ribonucleoside metabolic process;0.0237537618700922!GO:0043189;H4/H2A histone acetyltransferase complex;0.0245628010733076!GO:0043624;cellular protein complex disassembly;0.0245745317493019!GO:0030027;lamellipodium;0.0252275772563716!GO:0016584;nucleosome positioning;0.0269005376830655!GO:0008097;5S rRNA binding;0.027321673263573!GO:0065007;biological regulation;0.0278813676474021!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0280484585036597!GO:0004448;isocitrate dehydrogenase activity;0.0281554622415682!GO:0005669;transcription factor TFIID complex;0.0282123177043828!GO:0031124;mRNA 3'-end processing;0.0282123177043828!GO:0045892;negative regulation of transcription, DNA-dependent;0.0289337465959343!GO:0006984;ER-nuclear signaling pathway;0.0293346456363002!GO:0047485;protein N-terminus binding;0.0298181951423079!GO:0006505;GPI anchor metabolic process;0.0298901117745286!GO:0043433;negative regulation of transcription factor activity;0.0302481645823447!GO:0006367;transcription initiation from RNA polymerase II promoter;0.030470146300272!GO:0006007;glucose catabolic process;0.030623625630866!GO:0016579;protein deubiquitination;0.0308945207007364!GO:0006595;polyamine metabolic process;0.0308945207007364!GO:0006268;DNA unwinding during replication;0.0310143302814029!GO:0009451;RNA modification;0.0310143302814029!GO:0050178;phenylpyruvate tautomerase activity;0.0310143302814029!GO:0005083;small GTPase regulator activity;0.0314297756934548!GO:0016783;sulfurtransferase activity;0.032201850334226!GO:0007266;Rho protein signal transduction;0.0323193657593059!GO:0035035;histone acetyltransferase binding;0.0324526146702807!GO:0004185;serine carboxypeptidase activity;0.0324541114114479!GO:0006289;nucleotide-excision repair;0.0324541114114479!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0324541114114479!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0330284213445913!GO:0003756;protein disulfide isomerase activity;0.0333646335605494!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0333646335605494!GO:0006892;post-Golgi vesicle-mediated transport;0.033525940430752!GO:0007051;spindle organization and biogenesis;0.0337924674815956!GO:0017166;vinculin binding;0.0339021786550455!GO:0043130;ubiquitin binding;0.0347821993796198!GO:0032182;small conjugating protein binding;0.0347821993796198!GO:0006284;base-excision repair;0.0350970383647543!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0357138281028952!GO:0007033;vacuole organization and biogenesis;0.0358092236873399!GO:0005869;dynactin complex;0.0362319687719281!GO:0040029;regulation of gene expression, epigenetic;0.0363344277394547!GO:0042158;lipoprotein biosynthetic process;0.0363344277394547!GO:0003923;GPI-anchor transamidase activity;0.0364764801236764!GO:0016255;attachment of GPI anchor to protein;0.0364764801236764!GO:0042765;GPI-anchor transamidase complex;0.0364764801236764!GO:0048037;cofactor binding;0.0367129909545964!GO:0007050;cell cycle arrest;0.0381019725952571!GO:0019783;small conjugating protein-specific protease activity;0.0381161959604125!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0382995099904643!GO:0046426;negative regulation of JAK-STAT cascade;0.0385482209444163!GO:0043414;biopolymer methylation;0.0385805424337549!GO:0031529;ruffle organization and biogenesis;0.0387126932605694!GO:0030384;phosphoinositide metabolic process;0.0387674251156971!GO:0035267;NuA4 histone acetyltransferase complex;0.0388276634161807!GO:0007021;tubulin folding;0.0392342510828788!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0397903507234582!GO:0008180;signalosome;0.0398780193868346!GO:0005741;mitochondrial outer membrane;0.0405482064759117!GO:0051101;regulation of DNA binding;0.0418505439696039!GO:0006979;response to oxidative stress;0.0418505439696039!GO:0006378;mRNA polyadenylation;0.0419064989035567!GO:0006778;porphyrin metabolic process;0.0419064989035567!GO:0033013;tetrapyrrole metabolic process;0.0419064989035567!GO:0009116;nucleoside metabolic process;0.0433384606549797!GO:0042987;amyloid precursor protein catabolic process;0.0433467787962852!GO:0005784;translocon complex;0.0433659722456676!GO:0019511;peptidyl-proline hydroxylation;0.0434584426072263!GO:0018208;peptidyl-proline modification;0.0434584426072263!GO:0019471;4-hydroxyproline metabolic process;0.0434584426072263!GO:0018401;peptidyl-proline hydroxylation to 4-hydroxy-L-proline;0.0434584426072263!GO:0000339;RNA cap binding;0.043641611715461!GO:0000082;G1/S transition of mitotic cell cycle;0.043641611715461!GO:0004843;ubiquitin-specific protease activity;0.0437109276562546!GO:0032984;macromolecular complex disassembly;0.0439971870404967!GO:0043126;regulation of 1-phosphatidylinositol 4-kinase activity;0.0439971870404967!GO:0046813;virion attachment, binding of host cell surface receptor;0.0439971870404967!GO:0043128;positive regulation of 1-phosphatidylinositol 4-kinase activity;0.0439971870404967!GO:0045449;regulation of transcription;0.0448300788013301!GO:0030911;TPR domain binding;0.0452087327523187!GO:0005802;trans-Golgi network;0.0452087327523187!GO:0042769;DNA damage response, detection of DNA damage;0.0456919171956457!GO:0030522;intracellular receptor-mediated signaling pathway;0.0462075890815375!GO:0030742;GTP-dependent protein binding;0.0462300939793896!GO:0006144;purine base metabolic process;0.047136280335838!GO:0004300;enoyl-CoA hydratase activity;0.0489044604336426!GO:0004177;aminopeptidase activity;0.049843414543448!GO:0045334;clathrin-coated endocytic vesicle;0.049843414543448!GO:0003725;double-stranded RNA binding;0.0499408624798992!GO:0008287;protein serine/threonine phosphatase complex;0.0499917703270779 | |||
|sample_id=10693 | |sample_id=10693 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=HNF1A:2.17363488159;SNAI1..3:1.86513450823;ZEB1:1.86261118781;CDC5L:1.71140983552;PITX1..3:1.58248767703;AIRE:1.44211424522;XCPE1{core}:1.25562814322;ZBTB16:1.21564188139;SP1:1.19582279339;VSX1,2:1.14956600366;TEF:1.13195972699;NKX3-2:1.07674347329;ADNP_IRX_SIX_ZHX:1.05861866504;ATF4:1.04882815382;TOPORS:1.04663894311;RFX2..5_RFXANK_RFXAP:1.01813345061;LMO2:0.857989015727;ALX1:0.826117148841;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.824662910975;FOXP1:0.804608785238;ESR1:0.79982114452;ELK1,4_GABP{A,B1}:0.775535491378;STAT5{A,B}:0.756724117539;ONECUT1,2:0.72665483871;CUX2:0.698929909587;RBPJ:0.650393745699;MYOD1:0.590229277518;ESRRA:0.587886925233;TEAD1:0.567435841997;FOXL1:0.563323237408;FOX{D1,D2}:0.540965247014;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.52302034929;LHX3,4:0.469160097844;MTF1:0.468276885847;RXRA_VDR{dimer}:0.45296342496;RFX1:0.450950500313;FOX{F1,F2,J1}:0.434909745161;NR1H4:0.434104113881;HOXA9_MEIS1:0.411070442306;POU2F1..3:0.383831214435;ATF6:0.369776114759;IKZF1:0.356518485188;FOXD3:0.355975064296;PDX1:0.333557045637;POU1F1:0.332410116313;ARID5B:0.318639906235;NFE2L2:0.314749454446;HOX{A6,A7,B6,B7}:0.309176498718;HNF4A_NR2F1,2:0.289402787126;NKX2-1,4:0.252079736018;NRF1:0.250468791345;SOX{8,9,10}:0.250408454777;FOXO1,3,4:0.248389151822;ATF2:0.247914969215;ZNF148:0.230081027622;TFAP2B:0.22796725312;ZNF384:0.220075589388;HBP1_HMGB_SSRP1_UBTF:0.211944041722;AR:0.200928438605;TP53:0.197332424824;FOXQ1:0.194819026856;ZNF423:0.193536997559;SREBF1,2:0.184698183078;CDX1,2,4:0.179440593941;ZFP161:0.176549425299;NR5A1,2:0.15679042818;FOX{I1,J2}:0.144239151085;UFEwm:0.11845713192;BPTF:0.106731343195;NFY{A,B,C}:0.102410321034;PATZ1:0.0982057343166;FOXA2:0.0887551329657;ZNF143:0.0715213354542;NKX6-1,2:0.0708994513346;MED-1{core}:0.0690654528874;OCT4_SOX2{dimer}:0.0577997291039;NKX2-2,8:0.0391395949313;FOS_FOS{B,L1}_JUN{B,D}:0.00845450442099;TFAP2{A,C}:0.0001138308142;PBX1:-0.00214169426577;RORA:-0.00898538407557;FOXN1:-0.0129220706421;SOX2:-0.0189829060675;TFCP2:-0.0296136636293;POU3F1..4:-0.0333459000609;TAL1_TCF{3,4,12}:-0.0374111754804;HOX{A5,B5}:-0.0469883254243;PAX8:-0.062729100774;HAND1,2:-0.0815274510176;REST:-0.0872385832405;NKX2-3_NKX2-5:-0.100188880202;BACH2:-0.105153772087;E2F1..5:-0.125741701479;IKZF2:-0.136852176466;bHLH_family:-0.139670884755;FOSL2:-0.141055257772;GZF1:-0.144781943927;LEF1_TCF7_TCF7L1,2:-0.160199969366;NFE2:-0.163423464932;BREu{core}:-0.165668536116;CRX:-0.171493632998;PRRX1,2:-0.176282891259;RREB1:-0.176824664664;PAX6:-0.178101559091;EVI1:-0.184031614958;SOX17:-0.184064367759;SOX5:-0.190328086272;NANOG:-0.209569831424;MAZ:-0.211055502423;HIC1:-0.215615886949;NR3C1:-0.217447828437;DMAP1_NCOR{1,2}_SMARC:-0.228302333175;JUN:-0.2350590055;FOXP3:-0.247133705661;ATF5_CREB3:-0.251387502171;SRF:-0.269832422606;POU6F1:-0.279065803765;CREB1:-0.283214884286;IRF7:-0.293327338781;CEBPA,B_DDIT3:-0.29346431061;NR6A1:-0.31374334173;HLF:-0.315444057431;ZIC1..3:-0.338230455826;NFIL3:-0.344751494335;GCM1,2:-0.357231294648;MEF2{A,B,C,D}:-0.367670973198;TFDP1:-0.399262635562;PPARG:-0.414984929406;FOXM1:-0.441880792548;GLI1..3:-0.445974521044;EGR1..3:-0.450884016612;PAX2:-0.459023685302;NFKB1_REL_RELA:-0.46220259233;MYFfamily:-0.474985368966;HOX{A4,D4}:-0.501507535573;PAX3,7:-0.508976291975;YY1:-0.527887093589;EBF1:-0.527993118866;EP300:-0.568947079579;TBP:-0.580910621887;STAT2,4,6:-0.58711602937;TBX4,5:-0.588880775519;HMGA1,2:-0.595651522233;IRF1,2:-0.629807804719;GFI1:-0.638745735716;ALX4:-0.641950651254;NFE2L1:-0.648174419492;HIF1A:-0.648557746832;SPI1:-0.673282082303;ZBTB6:-0.680676579831;DBP:-0.691485261647;TLX1..3_NFIC{dimer}:-0.699641366597;GTF2I:-0.723270390739;SPIB:-0.726661852687;PAX4:-0.736212694316;KLF4:-0.737909034525;GTF2A1,2:-0.743321409927;NKX3-1:-0.747913650878;HMX1:-0.773774532533;MYB:-0.775687456024;ETS1,2:-0.816861275422;EN1,2:-0.823307707747;NHLH1,2:-0.829207799917;XBP1:-0.830850477085;RUNX1..3:-0.831476009184;GATA6:-0.841250593032;GFI1B:-0.871126449434;MTE{core}:-0.874407151683;PRDM1:-0.884356418256;T:-0.908535645599;PAX1,9:-0.913352437029;STAT1,3:-0.922469852253;HSF1,2:-0.943355211616;POU5F1:-0.950686366429;AHR_ARNT_ARNT2:-0.96724284263;ELF1,2,4:-0.98758383731;TGIF1:-0.99275233395;TLX2:-1.01348293096;MZF1:-1.04547856445;SMAD1..7,9:-1.08091068374;MYBL2:-1.10112549728;PAX5:-1.12210546889;NFATC1..3:-1.17083888715;NFIX:-1.26403397289;ZNF238:-1.30244482606;NANOG{mouse}:-1.32035499246;RXR{A,B,G}:-1.3437440055;MAFB:-1.37445959249;GATA4:-1.42025773114;HES1:-1.63895113682;TFAP4:-1.68018734611;SPZ1:-1.78303246093 | |top_motifs=HNF1A:2.17363488159;SNAI1..3:1.86513450823;ZEB1:1.86261118781;CDC5L:1.71140983552;PITX1..3:1.58248767703;AIRE:1.44211424522;XCPE1{core}:1.25562814322;ZBTB16:1.21564188139;SP1:1.19582279339;VSX1,2:1.14956600366;TEF:1.13195972699;NKX3-2:1.07674347329;ADNP_IRX_SIX_ZHX:1.05861866504;ATF4:1.04882815382;TOPORS:1.04663894311;RFX2..5_RFXANK_RFXAP:1.01813345061;LMO2:0.857989015727;ALX1:0.826117148841;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.824662910975;FOXP1:0.804608785238;ESR1:0.79982114452;ELK1,4_GABP{A,B1}:0.775535491378;STAT5{A,B}:0.756724117539;ONECUT1,2:0.72665483871;CUX2:0.698929909587;RBPJ:0.650393745699;MYOD1:0.590229277518;ESRRA:0.587886925233;TEAD1:0.567435841997;FOXL1:0.563323237408;FOX{D1,D2}:0.540965247014;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.52302034929;LHX3,4:0.469160097844;MTF1:0.468276885847;RXRA_VDR{dimer}:0.45296342496;RFX1:0.450950500313;FOX{F1,F2,J1}:0.434909745161;NR1H4:0.434104113881;HOXA9_MEIS1:0.411070442306;POU2F1..3:0.383831214435;ATF6:0.369776114759;IKZF1:0.356518485188;FOXD3:0.355975064296;PDX1:0.333557045637;POU1F1:0.332410116313;ARID5B:0.318639906235;NFE2L2:0.314749454446;HOX{A6,A7,B6,B7}:0.309176498718;HNF4A_NR2F1,2:0.289402787126;NKX2-1,4:0.252079736018;NRF1:0.250468791345;SOX{8,9,10}:0.250408454777;FOXO1,3,4:0.248389151822;ATF2:0.247914969215;ZNF148:0.230081027622;TFAP2B:0.22796725312;ZNF384:0.220075589388;HBP1_HMGB_SSRP1_UBTF:0.211944041722;AR:0.200928438605;TP53:0.197332424824;FOXQ1:0.194819026856;ZNF423:0.193536997559;SREBF1,2:0.184698183078;CDX1,2,4:0.179440593941;ZFP161:0.176549425299;NR5A1,2:0.15679042818;FOX{I1,J2}:0.144239151085;UFEwm:0.11845713192;BPTF:0.106731343195;NFY{A,B,C}:0.102410321034;PATZ1:0.0982057343166;FOXA2:0.0887551329657;ZNF143:0.0715213354542;NKX6-1,2:0.0708994513346;MED-1{core}:0.0690654528874;OCT4_SOX2{dimer}:0.0577997291039;NKX2-2,8:0.0391395949313;FOS_FOS{B,L1}_JUN{B,D}:0.00845450442099;TFAP2{A,C}:0.0001138308142;PBX1:-0.00214169426577;RORA:-0.00898538407557;FOXN1:-0.0129220706421;SOX2:-0.0189829060675;TFCP2:-0.0296136636293;POU3F1..4:-0.0333459000609;TAL1_TCF{3,4,12}:-0.0374111754804;HOX{A5,B5}:-0.0469883254243;PAX8:-0.062729100774;HAND1,2:-0.0815274510176;REST:-0.0872385832405;NKX2-3_NKX2-5:-0.100188880202;BACH2:-0.105153772087;E2F1..5:-0.125741701479;IKZF2:-0.136852176466;bHLH_family:-0.139670884755;FOSL2:-0.141055257772;GZF1:-0.144781943927;LEF1_TCF7_TCF7L1,2:-0.160199969366;NFE2:-0.163423464932;BREu{core}:-0.165668536116;CRX:-0.171493632998;PRRX1,2:-0.176282891259;RREB1:-0.176824664664;PAX6:-0.178101559091;EVI1:-0.184031614958;SOX17:-0.184064367759;SOX5:-0.190328086272;NANOG:-0.209569831424;MAZ:-0.211055502423;HIC1:-0.215615886949;NR3C1:-0.217447828437;DMAP1_NCOR{1,2}_SMARC:-0.228302333175;JUN:-0.2350590055;FOXP3:-0.247133705661;ATF5_CREB3:-0.251387502171;SRF:-0.269832422606;POU6F1:-0.279065803765;CREB1:-0.283214884286;IRF7:-0.293327338781;CEBPA,B_DDIT3:-0.29346431061;NR6A1:-0.31374334173;HLF:-0.315444057431;ZIC1..3:-0.338230455826;NFIL3:-0.344751494335;GCM1,2:-0.357231294648;MEF2{A,B,C,D}:-0.367670973198;TFDP1:-0.399262635562;PPARG:-0.414984929406;FOXM1:-0.441880792548;GLI1..3:-0.445974521044;EGR1..3:-0.450884016612;PAX2:-0.459023685302;NFKB1_REL_RELA:-0.46220259233;MYFfamily:-0.474985368966;HOX{A4,D4}:-0.501507535573;PAX3,7:-0.508976291975;YY1:-0.527887093589;EBF1:-0.527993118866;EP300:-0.568947079579;TBP:-0.580910621887;STAT2,4,6:-0.58711602937;TBX4,5:-0.588880775519;HMGA1,2:-0.595651522233;IRF1,2:-0.629807804719;GFI1:-0.638745735716;ALX4:-0.641950651254;NFE2L1:-0.648174419492;HIF1A:-0.648557746832;SPI1:-0.673282082303;ZBTB6:-0.680676579831;DBP:-0.691485261647;TLX1..3_NFIC{dimer}:-0.699641366597;GTF2I:-0.723270390739;SPIB:-0.726661852687;PAX4:-0.736212694316;KLF4:-0.737909034525;GTF2A1,2:-0.743321409927;NKX3-1:-0.747913650878;HMX1:-0.773774532533;MYB:-0.775687456024;ETS1,2:-0.816861275422;EN1,2:-0.823307707747;NHLH1,2:-0.829207799917;XBP1:-0.830850477085;RUNX1..3:-0.831476009184;GATA6:-0.841250593032;GFI1B:-0.871126449434;MTE{core}:-0.874407151683;PRDM1:-0.884356418256;T:-0.908535645599;PAX1,9:-0.913352437029;STAT1,3:-0.922469852253;HSF1,2:-0.943355211616;POU5F1:-0.950686366429;AHR_ARNT_ARNT2:-0.96724284263;ELF1,2,4:-0.98758383731;TGIF1:-0.99275233395;TLX2:-1.01348293096;MZF1:-1.04547856445;SMAD1..7,9:-1.08091068374;MYBL2:-1.10112549728;PAX5:-1.12210546889;NFATC1..3:-1.17083888715;NFIX:-1.26403397289;ZNF238:-1.30244482606;NANOG{mouse}:-1.32035499246;RXR{A,B,G}:-1.3437440055;MAFB:-1.37445959249;GATA4:-1.42025773114;HES1:-1.63895113682;TFAP4:-1.68018734611;SPZ1:-1.78303246093 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10693-109F9;search_select_hide=table117:FF:10693-109F9 | |||
}} | }} | ||
Latest revision as of 14:33, 3 June 2020
| Name: | serous cystadenocarcinoma cell line:HTOA |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11827 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11827
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11827
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.194 |
| 10 | 10 | 0.859 |
| 100 | 100 | 0.00791 |
| 101 | 101 | 0.95 |
| 102 | 102 | 0.393 |
| 103 | 103 | 0.418 |
| 104 | 104 | 0.753 |
| 105 | 105 | 0.691 |
| 106 | 106 | 0.522 |
| 107 | 107 | 0.396 |
| 108 | 108 | 0.643 |
| 109 | 109 | 0.339 |
| 11 | 11 | 0.948 |
| 110 | 110 | 0.954 |
| 111 | 111 | 0.785 |
| 112 | 112 | 0.588 |
| 113 | 113 | 0.51 |
| 114 | 114 | 0.708 |
| 115 | 115 | 0.192 |
| 116 | 116 | 0.892 |
| 117 | 117 | 0.95 |
| 118 | 118 | 0.0479 |
| 119 | 119 | 0.31 |
| 12 | 12 | 0.409 |
| 120 | 120 | 0.954 |
| 121 | 121 | 0.223 |
| 122 | 122 | 0.894 |
| 123 | 123 | 0.0454 |
| 124 | 124 | 0.729 |
| 125 | 125 | 0.719 |
| 126 | 126 | 0.772 |
| 127 | 127 | 0.418 |
| 128 | 128 | 0.0815 |
| 129 | 129 | 0.157 |
| 13 | 13 | 8.2981e-4 |
| 130 | 130 | 0.685 |
| 131 | 131 | 0.0212 |
| 132 | 132 | 0.783 |
| 133 | 133 | 0.00328 |
| 134 | 134 | 0.235 |
| 135 | 135 | 0.00352 |
| 136 | 136 | 0.00447 |
| 137 | 137 | 0.116 |
| 138 | 138 | 0.799 |
| 139 | 139 | 0.254 |
| 14 | 14 | 0.737 |
| 140 | 140 | 0.242 |
| 141 | 141 | 0.755 |
| 142 | 142 | 0.56 |
| 143 | 143 | 0.00266 |
| 144 | 144 | 0.908 |
| 145 | 145 | 0.606 |
| 146 | 146 | 0.55 |
| 147 | 147 | 0.282 |
| 148 | 148 | 0.137 |
| 149 | 149 | 0.731 |
| 15 | 15 | 0.912 |
| 150 | 150 | 0.488 |
| 151 | 151 | 0.523 |
| 152 | 152 | 0.604 |
| 153 | 153 | 0.646 |
| 154 | 154 | 0.897 |
| 155 | 155 | 0.543 |
| 156 | 156 | 0.889 |
| 157 | 157 | 0.472 |
| 158 | 158 | 0.886 |
| 159 | 159 | 0.3 |
| 16 | 16 | 0.861 |
| 160 | 160 | 0.928 |
| 161 | 161 | 0.233 |
| 162 | 162 | 0.772 |
| 163 | 163 | 0.563 |
| 164 | 164 | 0.617 |
| 165 | 165 | 0.113 |
| 166 | 166 | 0.527 |
| 167 | 167 | 0.167 |
| 168 | 168 | 0.0241 |
| 169 | 169 | 0.105 |
| 17 | 17 | 0.328 |
| 18 | 18 | 0.178 |
| 19 | 19 | 0.807 |
| 2 | 2 | 0.253 |
| 20 | 20 | 0.339 |
| 21 | 21 | 0.413 |
| 22 | 22 | 0.768 |
| 23 | 23 | 0.394 |
| 24 | 24 | 0.996 |
| 25 | 25 | 0.748 |
| 26 | 26 | 0.141 |
| 27 | 27 | 0.596 |
| 28 | 28 | 0.731 |
| 29 | 29 | 0.677 |
| 3 | 3 | 0.588 |
| 30 | 30 | 0.964 |
| 31 | 31 | 0.517 |
| 32 | 32 | 0.107 |
| 33 | 33 | 0.744 |
| 34 | 34 | 0.183 |
| 35 | 35 | 0.163 |
| 36 | 36 | 0.765 |
| 37 | 37 | 0.529 |
| 38 | 38 | 0.769 |
| 39 | 39 | 0.663 |
| 4 | 4 | 0.697 |
| 40 | 40 | 0.0109 |
| 41 | 41 | 0.0205 |
| 42 | 42 | 0.509 |
| 43 | 43 | 0.941 |
| 44 | 44 | 0.474 |
| 45 | 45 | 0.766 |
| 46 | 46 | 0.832 |
| 47 | 47 | 0.711 |
| 48 | 48 | 0.776 |
| 49 | 49 | 0.803 |
| 5 | 5 | 0.224 |
| 50 | 50 | 0.852 |
| 51 | 51 | 0.677 |
| 52 | 52 | 0.679 |
| 53 | 53 | 0.806 |
| 54 | 54 | 0.651 |
| 55 | 55 | 0.443 |
| 56 | 56 | 0.717 |
| 57 | 57 | 0.222 |
| 58 | 58 | 0.754 |
| 59 | 59 | 0.273 |
| 6 | 6 | 0.962 |
| 60 | 60 | 0.487 |
| 61 | 61 | 0.539 |
| 62 | 62 | 0.6 |
| 63 | 63 | 0.708 |
| 64 | 64 | 0.893 |
| 65 | 65 | 0.376 |
| 66 | 66 | 0.516 |
| 67 | 67 | 0.958 |
| 68 | 68 | 0.345 |
| 69 | 69 | 0.231 |
| 7 | 7 | 0.05 |
| 70 | 70 | 0.887 |
| 71 | 71 | 0.878 |
| 72 | 72 | 0.838 |
| 73 | 73 | 0.37 |
| 74 | 74 | 0.145 |
| 75 | 75 | 0.974 |
| 76 | 76 | 0.169 |
| 77 | 77 | 0.233 |
| 78 | 78 | 0.681 |
| 79 | 79 | 0.358 |
| 8 | 8 | 0.558 |
| 80 | 80 | 6.77558e-4 |
| 81 | 81 | 0.314 |
| 82 | 82 | 0.505 |
| 83 | 83 | 0.0458 |
| 84 | 84 | 0.36 |
| 85 | 85 | 0.346 |
| 86 | 86 | 0.696 |
| 87 | 87 | 0.137 |
| 88 | 88 | 0.981 |
| 89 | 89 | 0.35 |
| 9 | 9 | 0.1 |
| 90 | 90 | 0.931 |
| 91 | 91 | 0.031 |
| 92 | 92 | 0.43 |
| 93 | 93 | 0.258 |
| 94 | 94 | 0.168 |
| 95 | 95 | 0.392 |
| 96 | 96 | 0.34 |
| 97 | 97 | 0.946 |
| 98 | 98 | 0.957 |
| 99 | 99 | 0.705 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11827
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0104511 serous cystadenocarcinoma cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0000066 (epithelial cell)
0000159 (seromucus secreting cell)
0000255 (eukaryotic cell)
0000313 (serous secreting cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
193 (reproductive organ cancer)
305 (carcinoma)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
299 (adenocarcinoma)
2152 (ovary epithelial cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000483 (epithelium)
0000991 (gonad)
0003134 (female reproductive organ)
0004911 (epithelium of female gonad)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0004909 (epithelium of gonad)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)
0100977 (ovary cell line sample)
0100811 (ovary cancer cell line sample)
0104883 (cystadenocarcinoma cell line sample)
0104511 (serous cystadenocarcinoma cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0009117 (indifferent gonad)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)
