FF:10784-110H1: Difference between revisions

Latest revision as of 15:04, 3 June 2020

Name:	mucinous cystadenocarcinoma cell line:MCAS
Species:	Human (Homo sapiens)
Library ID:	CNhs11873
Sample type:	cell lines
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	ovary
dev stage	NA
sex	female
age	unknown
cell type	unclassifiable
cell line	MCAS
company	JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005895

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11873		CAGE		DRX007954		DRR008826

Accession ID Hg19

Library id		BAM		CTSS
CNhs11873		DRZ000251		DRZ001636

Accession ID Hg38

Library id		BAM		CTSS
CNhs11873		DRZ011601		DRZ012986

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.02
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.316
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.063
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.0707
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0283
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0427
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.574
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.243
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.345
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0051
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11873

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.558
MA0003.1	MA0003.1	0.978
MA0004.1	MA0004.1	0.0619
MA0006.1	MA0006.1	0.22
MA0007.1	MA0007.1	0.94
MA0009.1	MA0009.1	0.219
MA0014.1	MA0014.1	0.156
MA0017.1	MA0017.1	0.435
MA0018.2	MA0018.2	0.337
MA0019.1	MA0019.1	0.349
MA0024.1	MA0024.1	0.001
MA0025.1	MA0025.1	0.0218
MA0027.1	MA0027.1	0.898
MA0028.1	MA0028.1	0.0115
MA0029.1	MA0029.1	0.105
MA0030.1	MA0030.1	0.0322
MA0031.1	MA0031.1	0.187
MA0035.2	MA0035.2	7.0002e-5
MA0038.1	MA0038.1	0.831
MA0039.2	MA0039.2	0.0195
MA0040.1	MA0040.1	0.756
MA0041.1	MA0041.1	0.304
MA0042.1	MA0042.1	0.934
MA0043.1	MA0043.1	0.798
MA0046.1	MA0046.1	0.133
MA0047.2	MA0047.2	0.0288
MA0048.1	MA0048.1	0.622
MA0050.1	MA0050.1	0.0253
MA0051.1	MA0051.1	0.61
MA0052.1	MA0052.1	0.466
MA0055.1	MA0055.1	0.00326
MA0057.1	MA0057.1	0.22
MA0058.1	MA0058.1	0.0439
MA0059.1	MA0059.1	0.2
MA0060.1	MA0060.1	0.522
MA0061.1	MA0061.1	0.428
MA0062.2	MA0062.2	0.00809
MA0065.2	MA0065.2	0.319
MA0066.1	MA0066.1	0.656
MA0067.1	MA0067.1	0.656
MA0068.1	MA0068.1	0.41
MA0069.1	MA0069.1	0.661
MA0070.1	MA0070.1	0.812
MA0071.1	MA0071.1	0.524
MA0072.1	MA0072.1	0.799
MA0073.1	MA0073.1	0.728
MA0074.1	MA0074.1	0.391
MA0076.1	MA0076.1	0.0789
MA0077.1	MA0077.1	0.916
MA0078.1	MA0078.1	0.533
MA0079.2	MA0079.2	0.706
MA0080.2	MA0080.2	0.185
MA0081.1	MA0081.1	0.472
MA0083.1	MA0083.1	0.238
MA0084.1	MA0084.1	0.297
MA0087.1	MA0087.1	0.379
MA0088.1	MA0088.1	0.313
MA0090.1	MA0090.1	6.307e-4
MA0091.1	MA0091.1	0.0283
MA0092.1	MA0092.1	0.123
MA0093.1	MA0093.1	0.0696
MA0099.2	MA0099.2	1.6142e-17
MA0100.1	MA0100.1	0.851
MA0101.1	MA0101.1	0.87
MA0102.2	MA0102.2	0.979
MA0103.1	MA0103.1	1.33447e-12
MA0104.2	MA0104.2	0.285
MA0105.1	MA0105.1	0.0122
MA0106.1	MA0106.1	0.898
MA0107.1	MA0107.1	0.992
MA0108.2	MA0108.2	0.921
MA0111.1	MA0111.1	0.842
MA0112.2	MA0112.2	0.901
MA0113.1	MA0113.1	0.707
MA0114.1	MA0114.1	0.0854
MA0115.1	MA0115.1	0.202
MA0116.1	MA0116.1	0.0303
MA0117.1	MA0117.1	0.611
MA0119.1	MA0119.1	0.618
MA0122.1	MA0122.1	0.565
MA0124.1	MA0124.1	0.881
MA0125.1	MA0125.1	0.187
MA0131.1	MA0131.1	0.891
MA0135.1	MA0135.1	0.284
MA0136.1	MA0136.1	0.942
MA0137.2	MA0137.2	0.11
MA0138.2	MA0138.2	0.0137
MA0139.1	MA0139.1	0.883
MA0140.1	MA0140.1	0.0464
MA0141.1	MA0141.1	0.912
MA0142.1	MA0142.1	0.342
MA0143.1	MA0143.1	0.625
MA0144.1	MA0144.1	0.488
MA0145.1	MA0145.1	0.27
MA0146.1	MA0146.1	0.168
MA0147.1	MA0147.1	0.187
MA0148.1	MA0148.1	0.00461
MA0149.1	MA0149.1	0.144
MA0150.1	MA0150.1	0.0366
MA0152.1	MA0152.1	0.228
MA0153.1	MA0153.1	0.0544
MA0154.1	MA0154.1	0.043
MA0155.1	MA0155.1	0.178
MA0156.1	MA0156.1	0.384
MA0157.1	MA0157.1	0.695
MA0159.1	MA0159.1	0.241
MA0160.1	MA0160.1	0.106
MA0162.1	MA0162.1	0.836
MA0163.1	MA0163.1	0.011
MA0164.1	MA0164.1	0.685
MA0258.1	MA0258.1	0.79
MA0259.1	MA0259.1	0.737

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11873

Novel motif	Logo	P-value
1	1	0.581
10	10	0.956
100	100	0.885
101	101	0.0491
102	102	0.403
103	103	0.391
104	104	0.524
105	105	0.063
106	106	0.0745
107	107	0.104
108	108	0.388
109	109	0.00427
11	11	0.62
110	110	0.756
111	111	0.465
112	112	0.385
113	113	0.0373
114	114	0.65
115	115	0.813
116	116	0.25
117	117	0.621
118	118	0.568
119	119	0.582
12	12	0.673
120	120	0.602
121	121	0.947
122	122	0.015
123	123	0.62
124	124	0.0892
125	125	0.949
126	126	0.385
127	127	0.278
128	128	0.918
129	129	0.592
13	13	0.0757
130	130	0.415
131	131	0.512
132	132	0.857
133	133	0.12
134	134	0.0987
135	135	0.0274
136	136	0.112
137	137	0.332
138	138	0.789
139	139	0.665
14	14	0.967
140	140	0.794
141	141	0.246
142	142	0.671
143	143	0.22
144	144	0.0383
145	145	0.73
146	146	0.492
147	147	0.0562
148	148	0.138
149	149	0.207
15	15	0.179
150	150	0.256
151	151	0.816
152	152	0.0254
153	153	0.628
154	154	0.96
155	155	0.773
156	156	0.225
157	157	0.685
158	158	0.672
159	159	0.767
16	16	0.101
160	160	0.949
161	161	0.798
162	162	0.99
163	163	0.159
164	164	0.439
165	165	0.585
166	166	0.122
167	167	0.847
168	168	0.478
169	169	0.177
17	17	0.231
18	18	0.625
19	19	0.261
2	2	0.691
20	20	0.13
21	21	0.503
22	22	0.912
23	23	0.842
24	24	0.681
25	25	0.856
26	26	0.148
27	27	0.723
28	28	0.35
29	29	0.992
3	3	0.538
30	30	0.492
31	31	0.472
32	32	0.00728
33	33	0.0924
34	34	0.644
35	35	0.105
36	36	0.591
37	37	0.821
38	38	0.311
39	39	0.617
4	4	0.285
40	40	0.498
41	41	0.129
42	42	0.816
43	43	0.787
44	44	0.412
45	45	0.479
46	46	0.87
47	47	0.829
48	48	0.829
49	49	0.664
5	5	0.668
50	50	0.14
51	51	0.885
52	52	0.541
53	53	0.386
54	54	0.846
55	55	0.536
56	56	0.937
57	57	0.365
58	58	0.829
59	59	0.708
6	6	0.0255
60	60	0.19
61	61	0.189
62	62	0.649
63	63	0.117
64	64	0.973
65	65	0.562
66	66	0.0479
67	67	0.569
68	68	0.03
69	69	0.047
7	7	0.552
70	70	0.862
71	71	0.287
72	72	0.0556
73	73	0.0108
74	74	0.367
75	75	0.412
76	76	0.685
77	77	0.389
78	78	0.08
79	79	0.00327
8	8	0.958
80	80	0.556
81	81	0.0252
82	82	0.00638
83	83	0.253
84	84	0.465
85	85	0.361
86	86	0.549
87	87	0.0254
88	88	0.413
89	89	0.773
9	9	0.62
90	90	0.978
91	91	0.108
92	92	0.804
93	93	0.392
94	94	0.46
95	95	0.236
96	96	0.227
97	97	0.964
98	98	0.341
99	99	0.397

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11873

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
DOID:3603 mucinous cystadenocarcinoma
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0104883 cystadenocarcinoma cell line sample
UBERON:0000344 mucosa

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)
299 (adenocarcinoma)
3111 (cystadenocarcinoma)
3603 (mucinous cystadenocarcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0003134 (female reproductive organ)
0000344 (mucosa)
0005156 (reproductive structure)
0000064 (organ part)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0004923 (organ component layer)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)
0100977 (ovary cell line sample)
0100811 (ovary cancer cell line sample)
0104883 (cystadenocarcinoma cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0009117 (indifferent gonad)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000344,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000474,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000990,UBERON:0000991,UBERON:0000992,UBERON:0001048,UBERON:0001062,UBERON:0002050,UBERON:0002323,UBERON:0002532,UBERON:0002553,UBERON:0003100,UBERON:0003133,UBERON:0003134,UBERON:0004120,UBERON:0004176,UBERON:0004458,UBERON:0004923,UBERON:0005156,UBERON:0005423,UBERON:0005564,UBERON:0009117,UBERON:0009196
+|DRA_sample_Accession=CAGE@SAMD00005895
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000255,CL:0000548
+|accession_numbers=CAGE;DRX007954;DRR008826;DRZ000251;DRZ001636;DRZ011601;DRZ012986
-|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:299,DOID:305,DOID:3111,DOID:3603,DOID:4
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0003134,UBERON:0000344,UBERON:0005156,UBERON:0000064,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0004923,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0003100,UBERON:0000474
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000255
+|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:305,DOID:299,DOID:3111,DOID:3603
+|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0100167,FF:0100977,FF:0100811,FF:0104883
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr11:34642612..34642646,+!p1@EHF!2.23!168.84!EHF;;chr6:1312325..1312340,+!p1@FOXQ1!2.08!188.07!FOXQ1;;chr11:61520075..61520136,+!p1@C11orf9!1.92!168.20!C11orf9;;chr6:34204921..34204939,+!p3@HMGA1!1.68!1336.97!HMGA1;;chr3:111314186..111314204,-!p1@ZBED2!1.59!38.04!ZBED2;;chr17:46675558..46675577,-!p2@HOXB6!1.58!37.19!HOXB6;;chr6:10415484..10415508,-!p3@TFAP2A!1.55!34.23!TFAP2A;;chr8:55370487..55370503,+!p1@SOX17!1.54!33.60!SOX17;;chr20:50159198..50159299,-!p1@NFATC2!1.53!47.12!NFATC2;;chr6:10415276..10415341,-!p2@TFAP2A!1.49!36.13!TFAP2A;;chr17:46682321..46682362,-!p1@HOXB6!1.48!29.16!HOXB6;;chr1:201979703..201979721,+!p2@ELF3!1.42!25.15!ELF3;;chr1:201979743..201979762,+!p1@ELF3!1.38!23.24!ELF3;;chr7:97840743..97840786,+!p1@BHLHA15!1.37!22.40!BHLHA15;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.35!21.13!ZBED1;;chr11:34642656..34642667,+!p2@EHF!1.31!19.44!EHF;;chr6:34204672..34204692,+!p1@HMGA1!1.30!2044.23!HMGA1;;chr13:73633131..73633149,+!p1@KLF5!1.29!194.41!KLF5;;chr1:209979467..209979494,-!p1@IRF6!1.29!20.71!IRF6;;chr5:2751762..2751784,-!p1@IRX2!1.29!18.60!IRX2;;chr17:46687959..46688007,-!p2@HOXB7!1.27!24.30!HOXB7;;chr8:102504651..102504683,+!p1@GRHL2!1.27!17.75!GRHL2;;chr14:75988771..75988826,+!p1@BATF!1.26!22.61!BATF;;chr17:46622229..46622257,-!p6@HOXB2!1.25!19.65!HOXB2;;chr5:72744594..72744609,-!p1@FOXD1!1.22!71.21!FOXD1;;chr17:46622205..46622218,-!p3@HOXB2!1.22!18.17!HOXB2;;chr20:22564895..22564910,-!p1@FOXA2!1.22!15.64!FOXA2;;chr21:36421535..36421610,-!p2@RUNX1!1.21!53.25!RUNX1;;chr17:46622440..46622477,-!p5@HOXB2!1.21!16.90!HOXB2;;chr2:122042770..122042785,-!p1@TFCP2L1!1.21!15.21!TFCP2L1;;chr12:27485762..27485776,+!p3@ARNTL2!1.20!39.30!ARNTL2;;chr11:65667884..65667895,-!p2@FOSL1!1.19!55.79!FOSL1;;chr5:134369905..134369972,-!p1@PITX1!1.19!22.19!PITX1;;chr1:37945588..37945604,+!p3@ZC3H12A!1.18!14.16!ZC3H12A;;chr11:65686732..65686756,+!p2@DRAP1!1.17!58.32!DRAP1;;chr11:65686802..65686818,+!p6@DRAP1!1.17!24.09!DRAP1;;chr3:12330560..12330579,+!p1@PPARG!1.11!13.52!PPARG;;chr12:77459306..77459365,-!p1@E2F7!1.10!143.90!E2F7;;chr11:65667846..65667868,-!p1@FOSL1!1.06!276.61!FOSL1;;chr12:27485823..27485868,+!p2@ARNTL2!1.06!43.11!ARNTL2;;chr18:19749541..19749557,+!p1@GATA6!1.06!33.18!GATA6;;chr5:72744445..72744466,-!p2@FOXD1!1.06!17.75!FOXD1;;chr15:67418047..67418093,+!p4@SMAD3!1.05!12.89!SMAD3;;chr12:66218836..66218888,+!p1@HMGA2!1.04!94.03!HMGA2;;chr18:6414884..6414942,-!p1@L3MBTL4!1.04!12.47!L3MBTL4;;chr3:12329358..12329393,+!p3@PPARG!1.03!24.30!PPARG;;chr2:70142232..70142251,+!p1@MXD1!1.01!53.67!MXD1;;chr15:67418119..67418162,+!p5@SMAD3!1.00!10.14!SMAD3;;chr3:69915385..69915438,+!p3@MITF!1.00!9.09!MITF;;chr5:50679228..50679288,+!p1@ISL1!1.00!9.09!ISL1;;chr6:10419768..10419819,-!p6@TFAP2A!1.00!9.09!TFAP2A;;chr12:66218598..66218645,+!p2@HMGA2!0.99!41.42!HMGA2;;chr11:34645791..34645836,+!p3@EHF!0.99!8.66!EHF;;chr5:134369879..134369898,-!p2@PITX1!0.99!8.66!PITX1;;chr2:101436564..101436647,+!p1@NPAS2!0.98!176.87!NPAS2;;chr19:45908292..45908374,-!p1@PPP1R13L!0.98!76.92!PPP1R13L;;chr12:80084737..80084763,-!p3@PAWR!0.98!33.18!PAWR;;chr14:38064429..38064486,-!p1@FOXA1!0.95!7.82!FOXA1;;chr12:27485785..27485816,+!p1@ARNTL2!0.92!52.41!ARNTL2;;chr6:10412600..10412637,-!p1@TFAP2A!0.92!12.47!TFAP2A;;chr21:38071430..38071456,+!p1@SIM2!0.92!7.40!SIM2;;chr17:7493405..7493419,-!p1@SOX15!0.92!7.40!SOX15;;chr12:66218255..66218304,+!p3@HMGA2!0.91!20.07!HMGA2;;chr6:34524049..34524089,-!p2@SPDEF!0.91!7.18!SPDEF;;chr17:46703212..46703238,-!p2@HOXB9!0.91!7.18!HOXB9;;chr19:1753498..1753519,+!p1@ONECUT3!0.91!7.18!ONECUT3;;chr17:70117153..70117174,+!p1@SOX9!0.90!74.38!SOX9;;chr17:46621146..46621180,-!p10@HOXB2!0.89!6.76!HOXB2;;chr17:46690839..46690884,-!p1@HOXB8!0.89!6.76!HOXB8;;chr17:46687935..46687950,-!p3@HOXB7!0.88!6.55!HOXB7;;chr20:49547691..49547724,-!p2@ADNP!0.87!42.05!ADNP;;chr17:46675469..46675481,-!p4@HOXB6!0.87!6.34!HOXB6;;chr17:46691732..46691766,-!p4@HOXB8!0.87!6.34!HOXB8;;chr3:111314230..111314241,-!p2@ZBED2!0.87!6.34!ZBED2;;chr17:41623692..41623715,-!p1@ETV4!0.86!28.10!ETV4;;chr17:46692457..46692484,-!p2@HOXB8!0.85!6.13!HOXB8;;chr3:181429704..181429722,+!p1@SOX2!0.85!6.13!SOX2;;chr3:24536253..24536328,-!p1@THRB!0.84!11.62!THRB;;chr10:48355030..48355090,+!p1@ZNF488!0.84!7.82!ZNF488;;chr20:22565185..22565223,-!p3@FOXA2!0.84!5.92!FOXA2;;chr7:101917447..101917479,+!p4@CUX1!0.84!5.92!CUX1;;chr7:101917482..101917507,+!p6@CUX1!0.84!5.92!CUX1;;chr16:52581025..52581072,-!p1@TOX3!0.83!5.71!TOX3;;chr6:168227552..168227609,+!p1@MLLT4!0.81!48.18!MLLT4;;chr19:33865009..33865090,+!p3@CEBPG!0.81!7.40!CEBPG;;chr15:96869511..96869525,+!p16@NR2F2!0.81!6.13!NR2F2;;chr11:65554528..65554546,+!p1@OVOL1!0.81!5.49!OVOL1;;chr6:34210478..34210481,+!p8@HMGA1!0.81!5.49!HMGA1;;chr20:22565370..22565388,-!p2@FOXA2!0.81!5.49!FOXA2;;chr14:75988831..75988847,+!p2@BATF!0.80!5.28!BATF;;chr11:65554563..65554576,+!p2@OVOL1!0.80!5.28!OVOL1;;chr10:114710098..114710130,+!p2@TCF7L2!0.79!42.26!TCF7L2;;chr17:46621937..46621966,-!p2@HOXB2!0.79!14.79!HOXB2;;chr9:110250697..110250738,-!p2@KLF4!0.79!6.13!KLF4;;chr3:12329397..12329433,+!p2@PPARG!0.78!12.04!PPARG;;chr1:204042233..204042249,+!p1@SOX13!0.77!33.60!SOX13;;chr2:46524897..46524911,+!p2@EPAS1!0.77!14.58!EPAS1;;chr17:46621101..46621143,-!p7@HOXB2!0.77!6.76!HOXB2;;chr11:65686776..65686787,+!p9@DRAP1!0.77!5.92!DRAP1;;chr17:46675420..46675465,-!p3@HOXB6!0.77!5.71!HOXB6;;chr1:6479968..6479986,-!p1@HES2!0.77!4.86!HES2;;chr6:34524093..34524135,-!p1@SPDEF!0.77!4.86!SPDEF;;chr6:34205372..34205412,+!p5@HMGA1!0.76!26.41!HMGA1;;chr12:66218212..66218244,+!p5@HMGA2!0.76!7.18!HMGA2;;chr3:185826855..185826911,-!p1@ETV5!0.75!139.89!ETV5;;chr2:238600933..238600985,+!p3@LRRFIP1!0.74!27.05!LRRFIP1;;chr5:43120995..43121052,+!p1@ZNF131!0.74!25.36!ZNF131;;chr18:19749517..19749531,+!p3@GATA6!0.74!8.45!GATA6;;chr17:35294075..35294102,+!p1@ENST00000559335!0.74!4.44!LHX1;;chr3:69915369..69915381,+!p4@MITF!0.74!4.44!MITF;;chr12:54380404..54380433,+!p3@HOXC10!0.74!4.44!HOXC10;;chr13:45010939..45011033,-!p1@TSC22D1!0.72!313.16!TSC22D1;;chr17:41277372..41277418,-!p1@BRCA1!0.72!17.12!BRCA1;;chr15:67418099..67418118,+!p16@SMAD3!0.72!4.23!SMAD3;;chr6:10413188..10413249,-!p7@TFAP2A!0.72!4.23!TFAP2A;;chr3:12329339..12329356,+!p5@PPARG!0.72!4.23!PPARG;;chr19:33864571..33864596,+!p2@CEBPG!0.70!10.78!CEBPG;;chr8:67525443..67525459,-!p2@MYBL1!0.70!6.34!MYBL1;;chr12:66218003..66218018,+!p9@HMGA2!0.70!5.07!HMGA2;;chr6:10415263..10415274,-!p8@TFAP2A!0.70!4.01!TFAP2A;;chr8:11561684..11561751,+!p1@GATA4!0.70!4.01!GATA4;;chr17:46675539..46675551,-!p7@HOXB6!0.70!4.01!HOXB6;;chr9:132427972..132428056,+!p1@PRRX2!0.69!5.28!PRRX2;;chr16:2059754..2059777,-!p2@ZNF598!0.68!14.79!ZNF598;;chr17:46692318..46692362,-!p5@HOXB8!0.68!3.80!HOXB8;;chr10:135122906..135122921,+!p4@ZNF511!0.68!3.80!ZNF511;;chr12:54366975..54367001,+!p1@HOXC11!0.68!3.80!HOXC11;;chr10:114709999..114710031,+!p1@TCF7L2!0.67!102.28!TCF7L2;;chr6:34204973..34204990,+!p4@HMGA1!0.67!56.84!HMGA1;;chr4:4291837..4291859,-!p2@LYAR!0.66!13.31!LYAR;;chr12:27485889..27485900,+!p4@ARNTL2!0.66!4.44!ARNTL2;;chr6:10419824..10419840,-!p9@TFAP2A!0.66!3.59!TFAP2A;;chr20:49547593..49547611,-!p3@ADNP!0.65!12.89!ADNP;;chr1:935398..935465,-!p2@HES4!0.64!7.61!HES4;;chr5:2751785..2751808,-!p2@IRX2!0.64!3.38!IRX2;;chr6:28048343..28048354,+!p1@ZNF165!0.64!3.38!ZNF165;;chr7:27153454..27153469,-!p2@HOXA3!0.64!3.38!HOXA3;;chr3:69811858..69811881,+!p5@MITF!0.64!3.38!MITF;;chr17:46622175..46622186,-!p12@HOXB2!0.64!3.38!HOXB2;;chr17:46703528..46703549,-!p5@HOXB9!0.64!3.38!HOXB9;;chr9:110252035..110252057,-!p1@KLF4!0.63!61.49!KLF4;;chr20:42295745..42295765,+!p1@MYBL2!0.62!62.34!MYBL2;;chrX:48900782..48900793,-!p3@TFE3!0.62!6.55!TFE3;;chr2:121493492..121493537,+!p2@GLI2!0.62!5.71!GLI2;;chr17:46675619..46675642,-!p5@HOXB6!0.62!3.17!HOXB6;;chr17:46703687..46703740,-!p1@HOXB9!0.62!3.17!HOXB9;;chr20:49547731..49547753,-!p4@ADNP!0.61!8.88!ADNP;;chr3:101568349..101568365,+!p1@NFKBIZ!0.60!190.60!NFKBIZ;;chr20:49547910..49547988,-!p1@ADNP!0.60!135.45!ADNP;;chr7:86781916..86781963,+!p2@DMTF1!0.60!15.21!DMTF1;;chr5:178157651..178157689,-!p1@ZNF354A!0.60!14.58!ZNF354A;;chr6:1312155..1312187,+!p2@FOXQ1!0.60!2.96!FOXQ1;;chr8:102504690..102504704,+!p3@GRHL2!0.60!2.96!GRHL2;;chr17:46126136..46126152,+!p1@NFE2L1!0.59!183.00!NFE2L1;;chr7:99156249..99156311,+!p1@ZNF655!0.59!79.24!ZNF655;;chr10:43134001..43134026,-!p1@ZNF33B!0.59!15.43!ZNF33B;;chr19:19729477..19729542,-!p1@PBX4!0.59!6.97!PBX4;;chr3:185826814..185826825,-!p3@ETV5!0.59!5.92!ETV5;;chr17:46622114..46622138,-!p4@HOXB2!0.59!4.86!HOXB2;;chr21:36260980..36261011,-!p1@RUNX1!0.58!100.16!RUNX1;;chr19:4065485..4065546,-!p2@ZBTB7A!0.58!30.64!ZBTB7A;;chr17:46622070..46622109,-!p1@HOXB2!0.58!7.18!HOXB2;;chr10:8095593..8095625,+!p3@GATA3!0.58!3.38!GATA3;;chr5:34929677..34929789,+!p1@DNAJC21!0.57!97.63!DNAJC21;;chr4:38665810..38665827,+!p1@KLF3!0.57!48.60!KLF3;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.57!15.00!TAL1;;chr12:51566562..51566584,-!p2@TFCP2!0.57!8.88!TFCP2;;chr9:110251836..110251887,-!p4@KLF4!0.57!3.80!KLF4;;chr17:41623667..41623682,-!p8@ETV4!0.57!2.96!ETV4;;chr1:209979411..209979433,-!p2@IRF6!0.57!2.75!IRF6;;chr2:113994526..113994556,-!p3@PAX8!0.57!2.75!PAX8;;chr4:149363475..149363492,-!p2@NR3C2!0.57!2.75!NR3C2;;chr1:212782094..212782109,+!p1@ATF3!0.56!90.86!ATF3;;chr17:17740287..17740307,-!p1@SREBF1!0.56!86.85!SREBF1;;chr17:38256822..38256851,-!p1@NR1D1!0.56!25.78!NR1D1;;chr12:80084768..80084821,-!p2@PAWR!0.56!22.40!PAWR;;chr20:42295713..42295738,+!p2@MYBL2!0.56!19.02!MYBL2;;chr6:15246200..15246214,+!p2@JARID2!0.56!8.66!JARID2;;chr2:200322654..200322707,-!p2@SATB2!0.56!4.23!SATB2;;chr17:36861393..36861439,+!p2@MLLT6!0.55!18.81!MLLT6;;chr6:126102292..126102329,+!p3@NCOA7!0.55!10.14!NCOA7;;chr1:158979872..158979898,+!p3@IFI16!0.55!9.51!IFI16;;chr10:114711019..114711041,+!p7@TCF7L2!0.55!4.23!TCF7L2;;chr6:34524025..34524045,-!p3@SPDEF!0.55!2.54!SPDEF;;chr15:67418177..67418204,+!p9@SMAD3!0.55!2.54!SMAD3;;chr17:41622731..41622764,-!p5@ETV4!0.55!2.54!ETV4;;chr17: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+|ffid_belonging_in_development=UBERON:0009117,UBERON:0002532,UBERON:0006603,UBERON:0005564,UBERON:0010316
 |fonse_cell_line=FF:0100977,FF:0101120
 |fonse_cell_line_closure=FF:0100977,FF:0101120
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mucinous%2520cystadenocarcinoma%2520cell%2520line%253aMCAS.CNhs11873.10784-110H1.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mucinous%2520cystadenocarcinoma%2520cell%2520line%253aMCAS.CNhs11873.10784-110H1.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mucinous%2520cystadenocarcinoma%2520cell%2520line%253aMCAS.CNhs11873.10784-110H1.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mucinous%2520cystadenocarcinoma%2520cell%2520line%253aMCAS.CNhs11873.10784-110H1.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mucinous%2520cystadenocarcinoma%2520cell%2520line%253aMCAS.CNhs11873.10784-110H1.hg38.nobarcode.ctss.bed.gz
 |id=FF:10784-110H1
-|is_a=DOID:3603;;EFO:0002091;;FF:0000003;;FF:0000210;;FF:0104883;;UBERON:0000344
+|is_a=DOID:3603;;EFO:0002091;;FF:0000210;;FF:0104883;;UBERON:0000344
-|name=mucinous cystadenocarcinoma  cell line:MCAS
+|is_obsolete=
+|library_id=CNhs11873
+|library_id_phase_based=2:CNhs11873
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10784
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10784
+|name=mucinous cystadenocarcinoma cell line:MCAS
 |namespace=FANTOM5
 |part_of=
 |profile_cagescan=,,,
 |profile_hcage=CNhs11873,LSID830,release010,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=110
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=27.71307
 |sample_age=unknown
+|sample_category=cell lines
 |sample_cell_catalog=jcrb0240
 |sample_cell_line=MCAS
@@ Line 69: / Line 91: @@
 |sample_ethnicity=unknown
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.89045831217446e-227!GO:0005737;cytoplasm;5.11865393573225e-186!GO:0043226;organelle;3.0214846173048e-179!GO:0043229;intracellular organelle;9.42188771636654e-179!GO:0043231;intracellular membrane-bound organelle;6.83722018482867e-171!GO:0043227;membrane-bound organelle;1.00775930908665e-170!GO:0044422;organelle part;4.4824626781455e-150!GO:0044446;intracellular organelle part;1.31091474029606e-148!GO:0044444;cytoplasmic part;3.24795624135561e-121!GO:0032991;macromolecular complex;1.31698004602833e-99!GO:0030529;ribonucleoprotein complex;1.68537619100028e-82!GO:0005515;protein binding;7.18092470887916e-81!GO:0044237;cellular metabolic process;1.93890857626004e-79!GO:0044238;primary metabolic process;1.48063231650062e-78!GO:0043170;macromolecule metabolic process;1.35494808753674e-74!GO:0044428;nuclear part;2.93910793248333e-74!GO:0043233;organelle lumen;1.58943517060439e-69!GO:0031974;membrane-enclosed lumen;1.58943517060439e-69!GO:0003723;RNA binding;2.642629764798e-69!GO:0005634;nucleus;1.8885161957551e-67!GO:0005739;mitochondrion;2.70814003568839e-63!GO:0019538;protein metabolic process;1.86683452106173e-59!GO:0006412;translation;2.15802303468888e-54!GO:0044267;cellular protein metabolic process;2.95846693449724e-54!GO:0044260;cellular macromolecule metabolic process;4.13633626061193e-53!GO:0005840;ribosome;7.43366298328446e-52!GO:0016043;cellular component organization and biogenesis;8.91104950198667e-52!GO:0043234;protein complex;3.62137357623157e-51!GO:0031090;organelle membrane;8.44480855592121e-50!GO:0006396;RNA processing;7.11955423201273e-48!GO:0015031;protein transport;4.88367979805632e-46!GO:0033036;macromolecule localization;5.45036096387758e-46!GO:0003735;structural constituent of ribosome;3.0144386495161e-45!GO:0031981;nuclear lumen;9.57337010685655e-45!GO:0043228;non-membrane-bound organelle;4.9328735896394e-44!GO:0043232;intracellular non-membrane-bound organelle;4.9328735896394e-44!GO:0009059;macromolecule biosynthetic process;1.0186486218099e-42!GO:0045184;establishment of protein localization;7.55130101456205e-42!GO:0008104;protein localization;1.05092215251785e-41!GO:0043283;biopolymer metabolic process;3.22468576707686e-41!GO:0009058;biosynthetic process;5.52762835763057e-41!GO:0044429;mitochondrial part;8.04800155881516e-41!GO:0044249;cellular biosynthetic process;4.36430082092783e-40!GO:0031967;organelle envelope;8.83269125736857e-40!GO:0031975;envelope;2.05802677457548e-39!GO:0046907;intracellular transport;1.90903585095669e-38!GO:0033279;ribosomal subunit;2.57521229127148e-38!GO:0016071;mRNA metabolic process;2.7471805039949e-38!GO:0005829;cytosol;6.81660630337968e-38!GO:0006996;organelle organization and biogenesis;4.01415370641312e-37!GO:0006259;DNA metabolic process;1.55814262185192e-33!GO:0065003;macromolecular complex assembly;7.21164019108457e-33!GO:0006397;mRNA processing;1.08813912182354e-32!GO:0008380;RNA splicing;2.3836376313732e-32!GO:0006886;intracellular protein transport;3.84504729431159e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.95820392487362e-31!GO:0007049;cell cycle;2.00832480229367e-30!GO:0010467;gene expression;6.4588395285701e-30!GO:0022607;cellular component assembly;6.31720438783567e-29!GO:0000166;nucleotide binding;6.93093534406282e-29!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.1934120715479e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.72610123925108e-28!GO:0005654;nucleoplasm;3.11523959848339e-27!GO:0051649;establishment of cellular localization;5.45992804084657e-26!GO:0005740;mitochondrial envelope;1.22852434252643e-25!GO:0051641;cellular localization;2.06456091534629e-25!GO:0031966;mitochondrial membrane;2.96490485252155e-24!GO:0019866;organelle inner membrane;1.18842205742646e-23!GO:0012505;endomembrane system;4.92840831992594e-23!GO:0005681;spliceosome;5.59699704507706e-23!GO:0044451;nucleoplasm part;4.15957707966334e-22!GO:0044445;cytosolic part;1.31586214041807e-21!GO:0005743;mitochondrial inner membrane;1.92020383614796e-21!GO:0022402;cell cycle process;2.25750974813666e-21!GO:0032553;ribonucleotide binding;9.79219947571949e-21!GO:0032555;purine ribonucleotide binding;9.79219947571949e-21!GO:0017076;purine nucleotide binding;1.50659657214369e-20!GO:0043412;biopolymer modification;1.97793186035528e-20!GO:0016462;pyrophosphatase activity;3.16839701590058e-20!GO:0015934;large ribosomal subunit;3.24605048011571e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.02969945513606e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;6.12258070020881e-20!GO:0017111;nucleoside-triphosphatase activity;1.02886339786043e-19!GO:0043285;biopolymer catabolic process;1.39810483306252e-19!GO:0000278;mitotic cell cycle;3.20518283978544e-19!GO:0015935;small ribosomal subunit;3.94507982969781e-19!GO:0005524;ATP binding;4.51868004309852e-19!GO:0006119;oxidative phosphorylation;4.60397333074791e-19!GO:0006512;ubiquitin cycle;4.71552571234654e-19!GO:0006457;protein folding;4.77481737121704e-19!GO:0022618;protein-RNA complex assembly;4.83488483709496e-19!GO:0044265;cellular macromolecule catabolic process;4.83488483709496e-19!GO:0016874;ligase activity;7.30551077430143e-19!GO:0006464;protein modification process;1.00170542219499e-18!GO:0032559;adenyl ribonucleotide binding;1.02254065173167e-18!GO:0005730;nucleolus;1.4438835019462e-18!GO:0030554;adenyl nucleotide binding;2.65486097343842e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;2.98989436761723e-18!GO:0019941;modification-dependent protein catabolic process;3.67388891949938e-18!GO:0043632;modification-dependent macromolecule catabolic process;3.67388891949938e-18!GO:0031980;mitochondrial lumen;5.07238967186145e-18!GO:0005759;mitochondrial matrix;5.07238967186145e-18!GO:0006511;ubiquitin-dependent protein catabolic process;5.94098807174737e-18!GO:0044455;mitochondrial membrane part;6.05467995933586e-18!GO:0044257;cellular protein catabolic process;1.08118735808061e-17!GO:0006974;response to DNA damage stimulus;1.20984238834501e-17!GO:0005694;chromosome;1.47327515252522e-17!GO:0009057;macromolecule catabolic process;6.55835052187653e-17!GO:0005794;Golgi apparatus;6.63611517894294e-17!GO:0030163;protein catabolic process;3.29792121010993e-16!GO:0006605;protein targeting;3.32658404408462e-16!GO:0043687;post-translational protein modification;4.0842300542195e-16!GO:0008134;transcription factor binding;5.75663547020401e-16!GO:0051276;chromosome organization and biogenesis;6.46740602904431e-16!GO:0008135;translation factor activity, nucleic acid binding;7.73328049390053e-16!GO:0044248;cellular catabolic process;9.16317290268907e-16!GO:0006281;DNA repair;2.3829062308145e-15!GO:0044427;chromosomal part;3.12364032599815e-15!GO:0000502;proteasome complex (sensu Eukaryota);3.48675034764647e-15!GO:0048770;pigment granule;9.47788060637541e-15!GO:0042470;melanosome;9.47788060637541e-15!GO:0006260;DNA replication;1.09326033186437e-14!GO:0000087;M phase of mitotic cell cycle;1.28738303590259e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.83340318740608e-14!GO:0007067;mitosis;2.00643353841195e-14!GO:0005635;nuclear envelope;2.17358996667777e-14!GO:0003676;nucleic acid binding;2.2727145676869e-14!GO:0012501;programmed cell death;3.14904335687363e-14!GO:0005746;mitochondrial respiratory chain;3.34888620046476e-14!GO:0022403;cell cycle phase;4.32741473478257e-14!GO:0005761;mitochondrial ribosome;5.32491324810399e-14!GO:0000313;organellar ribosome;5.32491324810399e-14!GO:0006915;apoptosis;6.30589782078223e-14!GO:0048193;Golgi vesicle transport;6.9932329293424e-14!GO:0042254;ribosome biogenesis and assembly;1.11346392180896e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.23511678328353e-13!GO:0051301;cell division;1.86297706197434e-13!GO:0051726;regulation of cell cycle;1.97030182797855e-13!GO:0000074;regulation of progression through cell cycle;2.31437631487273e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.5472415352729e-13!GO:0008219;cell death;3.36726727015421e-13!GO:0016265;death;3.36726727015421e-13!GO:0031965;nuclear membrane;3.37301728388287e-13!GO:0050136;NADH dehydrogenase (quinone) activity;3.40491965906775e-13!GO:0003954;NADH dehydrogenase activity;3.40491965906775e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.40491965906775e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;4.0167710174344e-13!GO:0005783;endoplasmic reticulum;6.42444904043754e-13!GO:0051082;unfolded protein binding;6.72289523533859e-13!GO:0016887;ATPase activity;9.70211875758912e-13!GO:0006323;DNA packaging;1.83691586405134e-12!GO:0003743;translation initiation factor activity;1.83691586405134e-12!GO:0016192;vesicle-mediated transport;2.52517039814594e-12!GO:0006413;translational initiation;3.11040475185644e-12!GO:0044453;nuclear membrane part;3.41869650102613e-12!GO:0044432;endoplasmic reticulum part;3.89476227474212e-12!GO:0009719;response to endogenous stimulus;5.41342665352658e-12!GO:0000279;M phase;5.75426657508436e-12!GO:0042623;ATPase activity, coupled;8.33602121573197e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;8.68084975456276e-12!GO:0000375;RNA splicing, via transesterification reactions;8.68084975456276e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.68084975456276e-12!GO:0006913;nucleocytoplasmic transport;9.85340930863734e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.62234283975059e-11!GO:0006446;regulation of translational initiation;1.64628801222949e-11!GO:0016604;nuclear body;1.7313911773648e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.86867224810013e-11!GO:0042773;ATP synthesis coupled electron transport;1.86867224810013e-11!GO:0051169;nuclear transport;2.10023112543532e-11!GO:0051186;cofactor metabolic process;2.69087524333228e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.98812668911398e-11!GO:0045271;respiratory chain complex I;2.98812668911398e-11!GO:0005747;mitochondrial respiratory chain complex I;2.98812668911398e-11!GO:0051246;regulation of protein metabolic process;7.22691041931756e-11!GO:0005643;nuclear pore;8.49009935196686e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.69378569173758e-11!GO:0016070;RNA metabolic process;9.38425965767564e-11!GO:0008639;small protein conjugating enzyme activity;1.03186507233109e-10!GO:0004386;helicase activity;1.07674602359783e-10!GO:0006399;tRNA metabolic process;1.12845535773016e-10!GO:0006366;transcription from RNA polymerase II promoter;1.37234774427295e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.57730549580761e-10!GO:0006461;protein complex assembly;2.8611574949703e-10!GO:0009055;electron carrier activity;2.88770848968166e-10!GO:0004842;ubiquitin-protein ligase activity;3.90559515480839e-10!GO:0050657;nucleic acid transport;3.9258317527598e-10!GO:0051236;establishment of RNA localization;3.9258317527598e-10!GO:0050658;RNA transport;3.9258317527598e-10!GO:0006403;RNA localization;4.93906242933194e-10!GO:0000785;chromatin;5.56121186328773e-10!GO:0019787;small conjugating protein ligase activity;6.93090475128113e-10!GO:0008565;protein transporter activity;7.08880936283272e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.91906952017625e-10!GO:0003712;transcription cofactor activity;1.15694564251613e-09!GO:0065002;intracellular protein transport across a membrane;1.24701283635372e-09!GO:0006793;phosphorus metabolic process;1.52578626714578e-09!GO:0006796;phosphate metabolic process;1.52578626714578e-09!GO:0009056;catabolic process;2.01242179368072e-09!GO:0006732;coenzyme metabolic process;2.28698875092296e-09!GO:0005789;endoplasmic reticulum membrane;2.55100195857437e-09!GO:0016072;rRNA metabolic process;2.68358106923851e-09!GO:0008026;ATP-dependent helicase activity;2.76143633652315e-09!GO:0016607;nuclear speck;4.12798580519341e-09!GO:0046930;pore complex;4.2387732467806e-09!GO:0044431;Golgi apparatus part;6.22252961782809e-09!GO:0017038;protein import;6.69786696003432e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.69786696003432e-09!GO:0004812;aminoacyl-tRNA ligase activity;6.69786696003432e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.69786696003432e-09!GO:0016787;hydrolase activity;7.15213046356236e-09!GO:0016881;acid-amino acid ligase activity;9.19724211078665e-09!GO:0006364;rRNA processing;9.72940388070313e-09!GO:0016740;transferase activity;9.97837123128577e-09!GO:0043067;regulation of programmed cell death;1.2013109589559e-08!GO:0042981;regulation of apoptosis;1.49351611642603e-08!GO:0043038;amino acid activation;1.56885684719299e-08!GO:0006418;tRNA aminoacylation for protein translation;1.56885684719299e-08!GO:0043039;tRNA aminoacylation;1.56885684719299e-08!GO:0048523;negative regulation of cellular process;1.62835298890154e-08!GO:0005768;endosome;1.65438130902806e-08!GO:0051028;mRNA transport;1.68150853890357e-08!GO:0016568;chromatin modification;1.80099272111545e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.07415558022598e-08!GO:0030120;vesicle coat;3.08073498581998e-08!GO:0030662;coated vesicle membrane;3.08073498581998e-08!GO:0015630;microtubule cytoskeleton;3.83250906639142e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.85839421760117e-08!GO:0006333;chromatin assembly or disassembly;5.91381240604264e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.48307272957974e-08!GO:0005793;ER-Golgi intermediate compartment;6.92852436724764e-08!GO:0007005;mitochondrion organization and biogenesis;6.92852436724764e-08!GO:0032446;protein modification by small protein conjugation;7.82126770798494e-08!GO:0065004;protein-DNA complex assembly;1.00850571326325e-07!GO:0016567;protein ubiquitination;1.14991781916809e-07!GO:0048475;coated membrane;1.30193384404498e-07!GO:0030117;membrane coat;1.30193384404498e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.42492556678475e-07!GO:0009259;ribonucleotide metabolic process;1.5676207714916e-07!GO:0005667;transcription factor complex;1.71908540311911e-07!GO:0006261;DNA-dependent DNA replication;1.80423406132763e-07!GO:0006163;purine nucleotide metabolic process;2.06457137757679e-07!GO:0016310;phosphorylation;2.54518708550495e-07!GO:0048519;negative regulation of biological process;2.64710573357783e-07!GO:0016563;transcription activator activity;3.11349666437232e-07!GO:0015986;ATP synthesis coupled proton transport;3.59173870990901e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.59173870990901e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.75130010652371e-07!GO:0006164;purine nucleotide biosynthetic process;3.8764957524647e-07!GO:0009060;aerobic respiration;4.96803349126881e-07!GO:0000139;Golgi membrane;5.3740868579353e-07!GO:0005819;spindle;7.20566173700927e-07!GO:0009150;purine ribonucleotide metabolic process;7.83200429757237e-07!GO:0009260;ribonucleotide biosynthetic process;7.93553901419606e-07!GO:0051188;cofactor biosynthetic process;7.94053626105994e-07!GO:0000151;ubiquitin ligase complex;7.94053626105994e-07!GO:0043566;structure-specific DNA binding;8.8458157202878e-07!GO:0006916;anti-apoptosis;1.08786417051335e-06!GO:0019829;cation-transporting ATPase activity;1.10979583935948e-06!GO:0043069;negative regulation of programmed cell death;1.18773211286472e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.22494658870214e-06!GO:0003697;single-stranded DNA binding;1.34461126808946e-06!GO:0009141;nucleoside triphosphate metabolic process;1.35908639064695e-06!GO:0005813;centrosome;1.3813679534466e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.44592232516961e-06!GO:0043623;cellular protein complex assembly;1.60100271098044e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.74448433324078e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.74448433324078e-06!GO:0048522;positive regulation of cellular process;1.76740640740642e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.83737067582076e-06!GO:0045333;cellular respiration;2.40878920145245e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.50022407667656e-06!GO:0006754;ATP biosynthetic process;2.81496531069295e-06!GO:0006753;nucleoside phosphate metabolic process;2.81496531069295e-06!GO:0043066;negative regulation of apoptosis;2.86106374382921e-06!GO:0000775;chromosome, pericentric region;3.25126198027923e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.25627649703929e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.32225219696765e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.32225219696765e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.38249844801604e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.38249844801604e-06!GO:0007051;spindle organization and biogenesis;4.00347650422297e-06!GO:0005798;Golgi-associated vesicle;4.1680862274532e-06!GO:0046034;ATP metabolic process;4.1680862274532e-06!GO:0030532;small nuclear ribonucleoprotein complex;4.39622114806023e-06!GO:0005815;microtubule organizing center;4.43238494237616e-06!GO:0051170;nuclear import;4.58136843158251e-06!GO:0000245;spliceosome assembly;4.97480889566676e-06!GO:0003724;RNA helicase activity;5.14289714398295e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.28958252568586e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.41719650283072e-06!GO:0045786;negative regulation of progression through cell cycle;6.08900368921551e-06!GO:0045259;proton-transporting ATP synthase complex;6.63405398638055e-06!GO:0005839;proteasome core complex (sensu Eukaryota);6.65549205734147e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.96127425504108e-06!GO:0006606;protein import into nucleus;9.15387497947939e-06!GO:0050794;regulation of cellular process;1.0525657120276e-05!GO:0009108;coenzyme biosynthetic process;1.09529102354808e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.15210958668715e-05!GO:0006613;cotranslational protein targeting to membrane;1.1545649584759e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.1782995390494e-05!GO:0000075;cell cycle checkpoint;1.30577841785261e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.49774138068234e-05!GO:0016779;nucleotidyltransferase activity;1.52397561932496e-05!GO:0003713;transcription coactivator activity;1.64267304304307e-05!GO:0006752;group transfer coenzyme metabolic process;1.64688568642657e-05!GO:0019899;enzyme binding;1.79741856100727e-05!GO:0044440;endosomal part;1.8032666501572e-05!GO:0010008;endosome membrane;1.8032666501572e-05!GO:0007264;small GTPase mediated signal transduction;1.82717553924937e-05!GO:0051168;nuclear export;2.0612423938807e-05!GO:0006401;RNA catabolic process;2.42144011436812e-05!GO:0004298;threonine endopeptidase activity;2.7153191914023e-05!GO:0031324;negative regulation of cellular metabolic process;2.84092037287728e-05!GO:0007088;regulation of mitosis;2.9387043522109e-05!GO:0005762;mitochondrial large ribosomal subunit;2.94487926595611e-05!GO:0000315;organellar large ribosomal subunit;2.94487926595611e-05!GO:0003924;GTPase activity;3.03460027022725e-05!GO:0051329;interphase of mitotic cell cycle;3.05484983935762e-05!GO:0031497;chromatin assembly;3.07086674130548e-05!GO:0009892;negative regulation of metabolic process;3.09302288406318e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.11509794486629e-05!GO:0007010;cytoskeleton organization and biogenesis;3.43329888575708e-05!GO:0006099;tricarboxylic acid cycle;3.673563086613e-05!GO:0046356;acetyl-CoA catabolic process;3.673563086613e-05!GO:0006334;nucleosome assembly;4.44881197279494e-05!GO:0045454;cell redox homeostasis;4.87998304310125e-05!GO:0031988;membrane-bound vesicle;5.65285438016461e-05!GO:0045941;positive regulation of transcription;5.78746980491653e-05!GO:0016023;cytoplasmic membrane-bound vesicle;5.88415099857775e-05!GO:0006084;acetyl-CoA metabolic process;6.17218508082819e-05!GO:0065009;regulation of a molecular function;6.62480081293265e-05!GO:0000314;organellar small ribosomal subunit;6.64390435672612e-05!GO:0005763;mitochondrial small ribosomal subunit;6.64390435672612e-05!GO:0007243;protein kinase cascade;6.83373086531347e-05!GO:0051325;interphase;7.26630570542077e-05!GO:0009117;nucleotide metabolic process;7.29106273584822e-05!GO:0043021;ribonucleoprotein binding;7.57782187605459e-05!GO:0009109;coenzyme catabolic process;7.71010032497348e-05!GO:0006402;mRNA catabolic process;7.71243128477871e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.27759561488815e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;8.71430318480628e-05!GO:0051427;hormone receptor binding;9.41784217939799e-05!GO:0042802;identical protein binding;0.000103220982596764!GO:0005525;GTP binding;0.000115681186578017!GO:0051252;regulation of RNA metabolic process;0.000125588037565009!GO:0030036;actin cytoskeleton organization and biogenesis;0.000130487365758216!GO:0003899;DNA-directed RNA polymerase activity;0.000138412779755983!GO:0051052;regulation of DNA metabolic process;0.00014094576541524!GO:0031982;vesicle;0.000144992027456792!GO:0016363;nuclear matrix;0.000186896261277433!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000188483107681768!GO:0051187;cofactor catabolic process;0.00018972177111859!GO:0048518;positive regulation of biological process;0.000192156491627743!GO:0031410;cytoplasmic vesicle;0.000194661485385368!GO:0035257;nuclear hormone receptor binding;0.000197065202342261!GO:0031072;heat shock protein binding;0.000227899244647772!GO:0045893;positive regulation of transcription, DNA-dependent;0.000235818515378549!GO:0003729;mRNA binding;0.000241297493249458!GO:0005769;early endosome;0.000255276287648364!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000263368814025224!GO:0008092;cytoskeletal protein binding;0.000269257049777034!GO:0005657;replication fork;0.000312921658761176!GO:0016853;isomerase activity;0.000333840282348284!GO:0030658;transport vesicle membrane;0.00033398013615324!GO:0008094;DNA-dependent ATPase activity;0.000353989494528267!GO:0006612;protein targeting to membrane;0.000364045963929121!GO:0031252;leading edge;0.00036520165065018!GO:0005770;late endosome;0.000375828805968497!GO:0004674;protein serine/threonine kinase activity;0.000387656833818032!GO:0003690;double-stranded DNA binding;0.000410120907689445!GO:0008186;RNA-dependent ATPase activity;0.000424145157349678!GO:0008022;protein C-terminus binding;0.000491029251998781!GO:0006839;mitochondrial transport;0.000544729625739675!GO:0016564;transcription repressor activity;0.000546455410016598!GO:0006626;protein targeting to mitochondrion;0.000586699823846106!GO:0000049;tRNA binding;0.000598589273651324!GO:0030118;clathrin coat;0.000647563397316831!GO:0051338;regulation of transferase activity;0.000671596120317554!GO:0003682;chromatin binding;0.00070810791955379!GO:0005788;endoplasmic reticulum lumen;0.000741672215196333!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000741672215196333!GO:0006091;generation of precursor metabolites and energy;0.000741672215196333!GO:0003714;transcription corepressor activity;0.000764532909838158!GO:0005885;Arp2/3 protein complex;0.000798629724956164!GO:0006302;double-strand break repair;0.000809841365451641!GO:0030660;Golgi-associated vesicle membrane;0.00082172893846296!GO:0043681;protein import into mitochondrion;0.000825233819185536!GO:0009967;positive regulation of signal transduction;0.000825233819185536!GO:0019752;carboxylic acid metabolic process;0.000828096214199334!GO:0030133;transport vesicle;0.000851855089726479!GO:0048471;perinuclear region of cytoplasm;0.000869607731514225!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000883630746831309!GO:0000776;kinetochore;0.000889139942284552!GO:0005741;mitochondrial outer membrane;0.00089296360343236!GO:0006082;organic acid metabolic process;0.000921580083708697!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000929383739572847!GO:0003684;damaged DNA binding;0.000942794361296683!GO:0008033;tRNA processing;0.00101612090602272!GO:0016859;cis-trans isomerase activity;0.00102351330498778!GO:0006520;amino acid metabolic process;0.00105730522000426!GO:0030132;clathrin coat of coated pit;0.00107154305825662!GO:0030029;actin filament-based process;0.00107166084393524!GO:0005048;signal sequence binding;0.00107959787794914!GO:0005905;coated pit;0.0010978622913104!GO:0045045;secretory pathway;0.00111749408957078!GO:0006417;regulation of translation;0.00112582568024422!GO:0004004;ATP-dependent RNA helicase activity;0.00112803703438039!GO:0043549;regulation of kinase activity;0.00113338898375258!GO:0032561;guanyl ribonucleotide binding;0.00113338898375258!GO:0019001;guanyl nucleotide binding;0.00113338898375258!GO:0031968;organelle outer membrane;0.00118155842030298!GO:0043488;regulation of mRNA stability;0.00119039373800465!GO:0043487;regulation of RNA stability;0.00119039373800465!GO:0032508;DNA duplex unwinding;0.00128646594648658!GO:0032392;DNA geometric change;0.00128646594648658!GO:0006950;response to stress;0.00145513445946602!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00146716236697693!GO:0016791;phosphoric monoester hydrolase activity;0.00148308647964343!GO:0006352;transcription initiation;0.00152074278348218!GO:0007052;mitotic spindle organization and biogenesis;0.00153915434289381!GO:0016311;dephosphorylation;0.00155629739399277!GO:0033116;ER-Golgi intermediate compartment membrane;0.00155704726731116!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00156081349220704!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00156263008045422!GO:0048500;signal recognition particle;0.00156286963923026!GO:0044452;nucleolar part;0.00158822346044013!GO:0019867;outer membrane;0.00164663224630518!GO:0050790;regulation of catalytic activity;0.00176861055699699!GO:0051789;response to protein stimulus;0.00185217507344758!GO:0006986;response to unfolded protein;0.00185217507344758!GO:0007093;mitotic cell cycle checkpoint;0.00188783254015209!GO:0016301;kinase activity;0.00191267509564442!GO:0030867;rough endoplasmic reticulum membrane;0.00191992684004469!GO:0009893;positive regulation of metabolic process;0.00197363980646353!GO:0005876;spindle microtubule;0.00211641576508329!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00225882317872447!GO:0030125;clathrin vesicle coat;0.00225882317872447!GO:0030665;clathrin coated vesicle membrane;0.00225882317872447!GO:0051920;peroxiredoxin activity;0.00226158317953894!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00235089417794886!GO:0000059;protein import into nucleus, docking;0.00243305991730799!GO:0016197;endosome transport;0.00244614014415483!GO:0051128;regulation of cellular component organization and biogenesis;0.00252631669529734!GO:0008654;phospholipid biosynthetic process;0.00253873333038609!GO:0045859;regulation of protein kinase activity;0.00255880095860986!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0025784192048117!GO:0015399;primary active transmembrane transporter activity;0.0025784192048117!GO:0030119;AP-type membrane coat adaptor complex;0.00258356107799086!GO:0048468;cell development;0.00261454740640471!GO:0016481;negative regulation of transcription;0.00264631656611045!GO:0050662;coenzyme binding;0.00264631656611045!GO:0016491;oxidoreductase activity;0.00265315265877772!GO:0048037;cofactor binding;0.00265725286932661!GO:0006891;intra-Golgi vesicle-mediated transport;0.00266867878772745!GO:0030176;integral to endoplasmic reticulum membrane;0.00273812119560718!GO:0030131;clathrin adaptor complex;0.00282596885010973!GO:0007265;Ras protein signal transduction;0.00282596885010973!GO:0006405;RNA export from nucleus;0.0029263622797071!GO:0000082;G1/S transition of mitotic cell cycle;0.00295460412349866!GO:0006383;transcription from RNA polymerase III promoter;0.00303015693971411!GO:0005773;vacuole;0.00303015693971411!GO:0005874;microtubule;0.00312576215120794!GO:0006268;DNA unwinding during replication;0.00314492115718696!GO:0005637;nuclear inner membrane;0.00316036291050199!GO:0050789;regulation of biological process;0.00316728749905894!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00327715839903013!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00327715839903013!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00327715839903013!GO:0007059;chromosome segregation;0.00327715839903013!GO:0006414;translational elongation;0.00341291328695254!GO:0046983;protein dimerization activity;0.00344713994553711!GO:0016272;prefoldin complex;0.0035273193997197!GO:0007050;cell cycle arrest;0.0037815744711965!GO:0031326;regulation of cellular biosynthetic process;0.00387484669145703!GO:0035258;steroid hormone receptor binding;0.00392357383131579!GO:0007017;microtubule-based process;0.00395925360104148!GO:0004721;phosphoprotein phosphatase activity;0.00402183473853709!GO:0008168;methyltransferase activity;0.0040708990897327!GO:0009889;regulation of biosynthetic process;0.00416121233780472!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00418601302790065!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00442281705774273!GO:0045047;protein targeting to ER;0.00442281705774273!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00446923623091277!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00450326946254661!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00451300047239153!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00451300047239153!GO:0003678;DNA helicase activity;0.00460354263871548!GO:0016741;transferase activity, transferring one-carbon groups;0.00486900677598623!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00497401846570943!GO:0006818;hydrogen transport;0.00500162125886329!GO:0007242;intracellular signaling cascade;0.00506451979422294!GO:0015980;energy derivation by oxidation of organic compounds;0.00508495913587228!GO:0030880;RNA polymerase complex;0.00527364620756431!GO:0051287;NAD binding;0.0055630756944698!GO:0016251;general RNA polymerase II transcription factor activity;0.00559316683238343!GO:0015992;proton transport;0.00560914786534088!GO:0007006;mitochondrial membrane organization and biogenesis;0.00566363717864963!GO:0003711;transcription elongation regulator activity;0.00574806796607853!GO:0006611;protein export from nucleus;0.00576607574834559!GO:0030663;COPI coated vesicle membrane;0.00576607574834559!GO:0030126;COPI vesicle coat;0.00576607574834559!GO:0008139;nuclear localization sequence binding;0.00578137804203619!GO:0008312;7S RNA binding;0.00583660577987751!GO:0030134;ER to Golgi transport vesicle;0.00599975825170434!GO:0000786;nucleosome;0.00605381372885789!GO:0051087;chaperone binding;0.00613131185809508!GO:0030659;cytoplasmic vesicle membrane;0.00620005722697331!GO:0006284;base-excision repair;0.00622760496021305!GO:0005856;cytoskeleton;0.00640132079528141!GO:0006275;regulation of DNA replication;0.00641110745289191!GO:0005083;small GTPase regulator activity;0.00645576232422161!GO:0005684;U2-dependent spliceosome;0.0068486999696029!GO:0031325;positive regulation of cellular metabolic process;0.00684894667671545!GO:0008632;apoptotic program;0.00693808811720773!GO:0006892;post-Golgi vesicle-mediated transport;0.00697853911058472!GO:0048487;beta-tubulin binding;0.0070231687232647!GO:0030127;COPII vesicle coat;0.00724382605709565!GO:0012507;ER to Golgi transport vesicle membrane;0.00724382605709565!GO:0046483;heterocycle metabolic process;0.00729673119824068!GO:0006289;nucleotide-excision repair;0.0074655657811916!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00770988557937411!GO:0004518;nuclease activity;0.00802644431819513!GO:0030521;androgen receptor signaling pathway;0.00804140324219542!GO:0043022;ribosome binding;0.00813138049276291!GO:0004527;exonuclease activity;0.00911162378384562!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00927769045389187!GO:0000428;DNA-directed RNA polymerase complex;0.00927769045389187!GO:0043065;positive regulation of apoptosis;0.00958861788504059!GO:0004722;protein serine/threonine phosphatase activity;0.00960040272511222!GO:0006270;DNA replication initiation;0.00984792388605526!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0100535784995982!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0102719450440404!GO:0016044;membrane organization and biogenesis;0.0105197110531045!GO:0019843;rRNA binding;0.0106345897683286!GO:0008287;protein serine/threonine phosphatase complex;0.0106582595988284!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0107240995899576!GO:0016584;nucleosome positioning;0.0107354002219436!GO:0017166;vinculin binding;0.0108298501198886!GO:0030137;COPI-coated vesicle;0.0112784336143439!GO:0043492;ATPase activity, coupled to movement of substances;0.0113641993211397!GO:0033673;negative regulation of kinase activity;0.0117653827892072!GO:0006469;negative regulation of protein kinase activity;0.0117653827892072!GO:0006470;protein amino acid dephosphorylation;0.0118412110017916!GO:0000323;lytic vacuole;0.0119656347756564!GO:0005764;lysosome;0.0119656347756564!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.011976207545559!GO:0015002;heme-copper terminal oxidase activity;0.011976207545559!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.011976207545559!GO:0004129;cytochrome-c oxidase activity;0.011976207545559!GO:0008637;apoptotic mitochondrial changes;0.0121853361662949!GO:0043068;positive regulation of programmed cell death;0.0122113695293189!GO:0008361;regulation of cell size;0.0122135396277321!GO:0003746;translation elongation factor activity;0.0125848346442674!GO:0009112;nucleobase metabolic process;0.0131124031380665!GO:0006595;polyamine metabolic process;0.0133733071441697!GO:0048146;positive regulation of fibroblast proliferation;0.0136768562455747!GO:0015631;tubulin binding;0.0139929869665084!GO:0008234;cysteine-type peptidase activity;0.0140291656182113!GO:0031625;ubiquitin protein ligase binding;0.0145406209302137!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0147461118370623!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0147891390593801!GO:0000792;heterochromatin;0.01485244068361!GO:0009116;nucleoside metabolic process;0.0151790917845133!GO:0050681;androgen receptor binding;0.0154235752894635!GO:0008243;plasminogen activator activity;0.0156757088437534!GO:0006310;DNA recombination;0.015693190068724!GO:0009966;regulation of signal transduction;0.0162332229537384!GO:0007266;Rho protein signal transduction;0.0167146998002243!GO:0031529;ruffle organization and biogenesis;0.0168187391480989!GO:0008276;protein methyltransferase activity;0.0168722487318545!GO:0006984;ER-nuclear signaling pathway;0.0171094941048919!GO:0006509;membrane protein ectodomain proteolysis;0.0171284081918542!GO:0033619;membrane protein proteolysis;0.0171284081918542!GO:0048144;fibroblast proliferation;0.0171353984229742!GO:0048145;regulation of fibroblast proliferation;0.0171353984229742!GO:0007030;Golgi organization and biogenesis;0.0177389248463001!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0177521076871452!GO:0033043;regulation of organelle organization and biogenesis;0.0177521076871452!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0179280819777245!GO:0005669;transcription factor TFIID complex;0.0179658911440478!GO:0051348;negative regulation of transferase activity;0.0179922774887076!GO:0046982;protein heterodimerization activity;0.0180109208381606!GO:0046474;glycerophospholipid biosynthetic process;0.0180848743370745!GO:0005791;rough endoplasmic reticulum;0.0181314812084635!GO:0006354;RNA elongation;0.0182032472541556!GO:0016049;cell growth;0.0186304556426023!GO:0030145;manganese ion binding;0.0186905604617804!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0186905604617804!GO:0007034;vacuolar transport;0.0191614281280728!GO:0044433;cytoplasmic vesicle part;0.019545066504429!GO:0004860;protein kinase inhibitor activity;0.020053627785945!GO:0006519;amino acid and derivative metabolic process;0.0201234439931145!GO:0006376;mRNA splice site selection;0.0203172898589534!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0203172898589534!GO:0005832;chaperonin-containing T-complex;0.0204297593406808!GO:0022890;inorganic cation transmembrane transporter activity;0.0208154482023777!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0208738546173742!GO:0031124;mRNA 3'-end processing;0.0208738546173742!GO:0001726;ruffle;0.0211607560367412!GO:0045936;negative regulation of phosphate metabolic process;0.0215785876162252!GO:0008180;signalosome;0.0217668555175622!GO:0030695;GTPase regulator activity;0.022343743770403!GO:0008250;oligosaccharyl transferase complex;0.0226232825246939!GO:0001558;regulation of cell growth;0.0226662715202154!GO:0045334;clathrin-coated endocytic vesicle;0.0229093378834336!GO:0004576;oligosaccharyl transferase activity;0.022955910945066!GO:0007346;regulation of progression through mitotic cell cycle;0.0231497919314202!GO:0009165;nucleotide biosynthetic process;0.0231702014651761!GO:0007041;lysosomal transport;0.0231742315674002!GO:0000922;spindle pole;0.023271865646449!GO:0030140;trans-Golgi network transport vesicle;0.0236353967005042!GO:0051101;regulation of DNA binding;0.0237626992653772!GO:0043189;H4/H2A histone acetyltransferase complex;0.0239307479029287!GO:0001889;liver development;0.0241553168491331!GO:0003702;RNA polymerase II transcription factor activity;0.0250287293687497!GO:0032940;secretion by cell;0.0252437389819687!GO:0016569;covalent chromatin modification;0.0257505842594413!GO:0046489;phosphoinositide biosynthetic process;0.026331115009802!GO:0051059;NF-kappaB binding;0.0263894816983134!GO:0000118;histone deacetylase complex;0.0264103489653475!GO:0035267;NuA4 histone acetyltransferase complex;0.0265545303464605!GO:0008538;proteasome activator activity;0.0268801962311442!GO:0000339;RNA cap binding;0.0276729382031335!GO:0000096;sulfur amino acid metabolic process;0.0278952511699681!GO:0006144;purine base metabolic process;0.0284156314355964!GO:0006672;ceramide metabolic process;0.0285279080681642!GO:0044262;cellular carbohydrate metabolic process;0.0300260661966017!GO:0030433;ER-associated protein catabolic process;0.0303716288719561!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0303716288719561!GO:0032984;macromolecular complex disassembly;0.0305466046593167!GO:0030911;TPR domain binding;0.0305513729312597!GO:0008629;induction of apoptosis by intracellular signals;0.0307580638147274!GO:0012506;vesicle membrane;0.0308904317563527!GO:0016653;oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor;0.0310370930213638!GO:0046426;negative regulation of JAK-STAT cascade;0.031078533467293!GO:0045792;negative regulation of cell size;0.0311762022723164!GO:0051098;regulation of binding;0.0313460905722664!GO:0043624;cellular protein complex disassembly;0.0316275927136021!GO:0008652;amino acid biosynthetic process;0.0317287498693309!GO:0032535;regulation of cellular component size;0.0317287498693309!GO:0008047;enzyme activator activity;0.0318195885424801!GO:0019783;small conjugating protein-specific protease activity;0.0319267723506187!GO:0045926;negative regulation of growth;0.0321349693984914!GO:0030128;clathrin coat of endocytic vesicle;0.0322488062226808!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0322488062226808!GO:0030122;AP-2 adaptor complex;0.0322488062226808!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0323985752310862!GO:0006650;glycerophospholipid metabolic process;0.0324141447135587!GO:0000123;histone acetyltransferase complex;0.0326459424491825!GO:0030832;regulation of actin filament length;0.0326633294855496!GO:0006338;chromatin remodeling;0.0332422608646967!GO:0051053;negative regulation of DNA metabolic process;0.0338967233559043!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.034025119902864!GO:0030308;negative regulation of cell growth;0.0340585056400966!GO:0009119;ribonucleoside metabolic process;0.0345470569703213!GO:0031902;late endosome membrane;0.0345470569703213!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0345470569703213!GO:0040029;regulation of gene expression, epigenetic;0.0345936858373628!GO:0042393;histone binding;0.0347990825120142!GO:0031371;ubiquitin conjugating enzyme complex;0.0348407298567333!GO:0030833;regulation of actin filament polymerization;0.034983501480393!GO:0042326;negative regulation of phosphorylation;0.0350738793692253!GO:0032259;methylation;0.0356978413435742!GO:0050178;phenylpyruvate tautomerase activity;0.0359610035860607!GO:0042770;DNA damage response, signal transduction;0.0361733253502691!GO:0032981;mitochondrial respiratory chain complex I assembly;0.036714273926845!GO:0010257;NADH dehydrogenase complex assembly;0.036714273926845!GO:0033108;mitochondrial respiratory chain complex assembly;0.036714273926845!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.036714273926845!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.036714273926845!GO:0006497;protein amino acid lipidation;0.0368341470375997!GO:0043414;biopolymer methylation;0.0370114100317637!GO:0004128;cytochrome-b5 reductase activity;0.0371063601053798!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0372341304032943!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0376638888226666!GO:0005869;dynactin complex;0.0378532628436787!GO:0000725;recombinational repair;0.0379978546971678!GO:0000724;double-strand break repair via homologous recombination;0.0379978546971678!GO:0046519;sphingoid metabolic process;0.0385970720803051!GO:0005784;translocon complex;0.0392419677000821!GO:0004843;ubiquitin-specific protease activity;0.0393114852200414!GO:0009303;rRNA transcription;0.0397932920053579!GO:0030518;steroid hormone receptor signaling pathway;0.0397967125290449!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0401127002622144!GO:0040008;regulation of growth;0.0401897499434252!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0407435291691906!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0409832960970441!GO:0004003;ATP-dependent DNA helicase activity;0.0410719843553631!GO:0006458;'de novo' protein folding;0.0417026988394283!GO:0051084;'de novo' posttranslational protein folding;0.0417026988394283!GO:0019206;nucleoside kinase activity;0.0419454639015084!GO:0000152;nuclear ubiquitin ligase complex;0.0423771610833068!GO:0042158;lipoprotein biosynthetic process;0.043174154774373!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.043174154774373!GO:0046822;regulation of nucleocytoplasmic transport;0.0439612573365638!GO:0030384;phosphoinositide metabolic process;0.0450423627334333!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0450536541010433!GO:0012510;trans-Golgi network transport vesicle membrane;0.0450536541010433!GO:0043241;protein complex disassembly;0.0454215350448567!GO:0017134;fibroblast growth factor binding;0.0462031684238771!GO:0006607;NLS-bearing substrate import into nucleus;0.0462711706922301!GO:0003756;protein disulfide isomerase activity;0.0463426948620881!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0463426948620881!GO:0060166;olfactory pit development;0.0463426948620881!GO:0021768;nucleus accumbens development;0.0463426948620881!GO:0002072;optic cup morphogenesis involved in camera-type eye development;0.0463426948620881!GO:0030508;thiol-disulfide exchange intermediate activity;0.0464814764222687!GO:0015036;disulfide oxidoreductase activity;0.0464814764222687!GO:0031301;integral to organelle membrane;0.0467616880501715!GO:0004680;casein kinase activity;0.0471501628928228!GO:0007173;epidermal growth factor receptor signaling pathway;0.0471758233133542!GO:0030031;cell projection biogenesis;0.0476918949319819!GO:0031123;RNA 3'-end processing;0.0480484162599514!GO:0000287;magnesium ion binding;0.0484653624402317!GO:0006406;mRNA export from nucleus;0.0484724820579856!GO:0004177;aminopeptidase activity;0.0487330295804094!GO:0016407;acetyltransferase activity;0.0487616070141204!GO:0016790;thiolester hydrolase activity;0.0491652596503669!GO:0005862;muscle thin filament tropomyosin;0.0491652596503669!GO:0043596;nuclear replication fork;0.0491652596503669!GO:0032200;telomere organization and biogenesis;0.0492396066564848!GO:0000723;telomere maintenance;0.0492396066564848!GO:0008408;3'-5' exonuclease activity;0.0494429098073181!GO:0051540;metal cluster binding;0.0496436285581219!GO:0051536;iron-sulfur cluster binding;0.0496436285581219!GO:0008426;protein kinase C inhibitor activity;0.0498649364369377
 |sample_id=10784
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=ovary
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+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10784-110H1;search_select_hide=table117:FF:10784-110H1
 }}

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FF:10784-110H1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 15:04, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0