FF:11281-116I3: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005609 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005609 | ||
|accession_numbers=CAGE;DRX008452;DRR009324;DRZ000749;DRZ002134;DRZ012099;DRZ013484 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037062;DRR041428;DRZ007070 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001134,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002036,UBERON:0002385,UBERON:0010317,UBERON:0001015,UBERON:0002204,UBERON:0000383 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0000393,CL:0000183,CL:0000187,CL:0000211,CL:0000255,CL:0000188 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000162 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Skeletal%2520Muscle%2520Cells%252c%2520donor1.CNhs11083.11281-116I3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Skeletal%2520Muscle%2520Cells%252c%2520donor1.CNhs11083.11281-116I3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Skeletal%2520Muscle%2520Cells%252c%2520donor1.CNhs11083.11281-116I3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Skeletal%2520Muscle%2520Cells%252c%2520donor1.CNhs11083.11281-116I3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Skeletal%2520Muscle%2520Cells%252c%2520donor1.CNhs11083.11281-116I3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11281-116I3 | |id=FF:11281-116I3 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000162 | ||
|is_obsolete= | |||
|library_id=CNhs11083 | |||
|library_id_phase_based=2:CNhs11083 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11281 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10005.GTAGAG.11281 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11281 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10005.GTAGAG.11281 | |||
|name=Skeletal Muscle Cells, donor1 | |name=Skeletal Muscle Cells, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11083,LSID724,release008,COMPLETED | |profile_hcage=CNhs11083,LSID724,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10005,,, | |profile_srnaseq=SRhi10005,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.0200381238622658,0,0,0.389176857283435,0,-0.0835533091242907,0,-0.245558720989617,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0765582893863322,0,0.0552969011848435,0,0,0,-0.0211931753059621,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0.0400762477245316,0,-0.0906028157811697,0,0,0,0,0,0,0,0,-0.00417689725056856,0,0,0,0.141977151642548,0,0.0434139550152218,0.0400762477245316,-0.0569161135180736,0,0,-0.0572673794885654,0,0,0,0,0,0,0,0,0.0767647209620954,0,0,0,0,0.0400762477245316,0,0,0,-0.0781902811374304,0.0200381238622658,0,0.0244528125804753,0,0,0,0.0609786785267685,0.0383823604810477,0,0,0.0631387483399394,0.0118323005588594,0,0.248798315541539,0.0400762477245316,0,-0.021270630275611,-0.118439076938629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0158534443329098,0,0,0,-0.10998444877562,-0.0607470406239947,0,0,0,0,0,0 | |||
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| |||
|rna_box=116 | |rna_box=116 | ||
|rna_catalog_number=CA150-R10f | |rna_catalog_number=CA150-R10f | ||
| Line 56: | Line 82: | ||
|rna_tube_id=116I3 | |rna_tube_id=116I3 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10005.GTAGAG | |||
|sample_age=embryo 22week | |sample_age=embryo 22week | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=U | |sample_ethnicity=U | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.45724752923646e-238!GO:0043226;organelle;7.7301495368273e-195!GO:0043229;intracellular organelle;1.65824225753728e-194!GO:0043231;intracellular membrane-bound organelle;3.05514964838545e-185!GO:0043227;membrane-bound organelle;8.56098954516458e-185!GO:0005737;cytoplasm;1.73752476107533e-176!GO:0044422;organelle part;3.40355190005372e-129!GO:0044446;intracellular organelle part;5.29016207532812e-128!GO:0044444;cytoplasmic part;4.76606981879959e-122!GO:0032991;macromolecular complex;6.6956424193738e-101!GO:0030529;ribonucleoprotein complex;1.07551852201472e-89!GO:0005515;protein binding;1.71439625931098e-87!GO:0044238;primary metabolic process;1.36592234588266e-86!GO:0044237;cellular metabolic process;1.23112598149611e-85!GO:0043170;macromolecule metabolic process;1.76695568368036e-85!GO:0005634;nucleus;1.031169839802e-82!GO:0043233;organelle lumen;1.1872737079715e-74!GO:0031974;membrane-enclosed lumen;1.1872737079715e-74!GO:0044428;nuclear part;8.94995829539312e-72!GO:0003723;RNA binding;5.03399179420305e-71!GO:0005739;mitochondrion;6.14742712057043e-61!GO:0010467;gene expression;1.12082455890834e-54!GO:0005840;ribosome;9.38436403036493e-53!GO:0043283;biopolymer metabolic process;1.26046548480311e-52!GO:0006396;RNA processing;1.48247340480363e-52!GO:0043234;protein complex;5.54997695679411e-50!GO:0016043;cellular component organization and biogenesis;3.75540550354356e-49!GO:0006412;translation;5.32551928230444e-49!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.09088935303746e-46!GO:0019538;protein metabolic process;7.87240704070175e-46!GO:0003735;structural constituent of ribosome;9.56884373205987e-46!GO:0031981;nuclear lumen;4.29940589091088e-45!GO:0031090;organelle membrane;9.08480861964712e-41!GO:0044260;cellular macromolecule metabolic process;9.08480861964712e-41!GO:0015031;protein transport;1.56774732835263e-40!GO:0033279;ribosomal subunit;2.39733800451615e-40!GO:0044429;mitochondrial part;3.38077874566481e-40!GO:0044267;cellular protein metabolic process;5.00647482217071e-40!GO:0033036;macromolecule localization;1.63559915793918e-39!GO:0016071;mRNA metabolic process;3.98363379539612e-39!GO:0045184;establishment of protein localization;9.39774218794036e-37!GO:0009059;macromolecule biosynthetic process;1.07704479800803e-36!GO:0008380;RNA splicing;4.25451793195047e-36!GO:0008104;protein localization;5.20543303030292e-36!GO:0031967;organelle envelope;8.33620303610828e-36!GO:0044249;cellular biosynthetic process;1.398142778786e-35!GO:0005829;cytosol;1.42638636380211e-35!GO:0031975;envelope;1.99984331581548e-35!GO:0009058;biosynthetic process;9.4378689203355e-35!GO:0046907;intracellular transport;9.84329384750255e-34!GO:0043228;non-membrane-bound organelle;1.04572370263483e-33!GO:0043232;intracellular non-membrane-bound organelle;1.04572370263483e-33!GO:0006397;mRNA processing;2.02147021948672e-33!GO:0006996;organelle organization and biogenesis;1.06235328049591e-31!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.21444691918704e-31!GO:0003676;nucleic acid binding;5.53687471468959e-31!GO:0065003;macromolecular complex assembly;1.573739334682e-29!GO:0006886;intracellular protein transport;2.62750105040943e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.24514823571109e-29!GO:0022607;cellular component assembly;2.13998968828131e-28!GO:0016070;RNA metabolic process;7.18405254463093e-28!GO:0005654;nucleoplasm;2.18746182248643e-26!GO:0005681;spliceosome;3.56499915489649e-26!GO:0005740;mitochondrial envelope;2.14044373851364e-25!GO:0019866;organelle inner membrane;4.86404586061715e-24!GO:0031966;mitochondrial membrane;8.71030916884725e-24!GO:0005743;mitochondrial inner membrane;2.13733895434569e-22!GO:0044445;cytosolic part;3.8810933820801e-22!GO:0044451;nucleoplasm part;5.86989984342295e-22!GO:0015934;large ribosomal subunit;7.84971404036678e-21!GO:0005730;nucleolus;9.49771301416957e-21!GO:0015935;small ribosomal subunit;1.40326100606634e-20!GO:0006259;DNA metabolic process;6.05949989677471e-20!GO:0006457;protein folding;2.21979171785539e-19!GO:0051649;establishment of cellular localization;2.30979177034749e-19!GO:0051641;cellular localization;2.46436868502361e-19!GO:0008134;transcription factor binding;3.19667308670898e-19!GO:0006119;oxidative phosphorylation;3.20144362410099e-19!GO:0000166;nucleotide binding;1.24273829102039e-18!GO:0006512;ubiquitin cycle;2.58262524620908e-18!GO:0016874;ligase activity;2.70232125564239e-18!GO:0031980;mitochondrial lumen;8.21790506729097e-18!GO:0005759;mitochondrial matrix;8.21790506729097e-18!GO:0044455;mitochondrial membrane part;9.13187939460148e-18!GO:0048770;pigment granule;6.93070804869403e-17!GO:0042470;melanosome;6.93070804869403e-17!GO:0022618;protein-RNA complex assembly;1.3987768594143e-16!GO:0006605;protein targeting;2.57800638801184e-16!GO:0016462;pyrophosphatase activity;2.96598355989846e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.13732764650632e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;5.68031023497585e-16!GO:0005783;endoplasmic reticulum;6.5994738317148e-16!GO:0005761;mitochondrial ribosome;1.54438489091321e-15!GO:0000313;organellar ribosome;1.54438489091321e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.58604012447131e-15!GO:0042254;ribosome biogenesis and assembly;1.84722309782544e-15!GO:0008135;translation factor activity, nucleic acid binding;1.84722309782544e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.88303042963012e-15!GO:0017111;nucleoside-triphosphatase activity;1.93299558224269e-15!GO:0019941;modification-dependent protein catabolic process;2.40704337060139e-15!GO:0043632;modification-dependent macromolecule catabolic process;2.40704337060139e-15!GO:0012505;endomembrane system;2.60081546995412e-15!GO:0006511;ubiquitin-dependent protein catabolic process;4.26817674948457e-15!GO:0044257;cellular protein catabolic process;4.56905336267857e-15!GO:0005746;mitochondrial respiratory chain;5.73029677261726e-15!GO:0044265;cellular macromolecule catabolic process;6.0658724870219e-15!GO:0043285;biopolymer catabolic process;6.71835985121424e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.10294411145679e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.87855568800674e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.1828164677924e-14!GO:0030163;protein catabolic process;7.93928433554919e-14!GO:0051186;cofactor metabolic process;1.20805950238608e-13!GO:0044432;endoplasmic reticulum part;1.65855054676553e-13!GO:0051082;unfolded protein binding;1.91916817413191e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.05537525021097e-13!GO:0003954;NADH dehydrogenase activity;2.05537525021097e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.05537525021097e-13!GO:0003712;transcription cofactor activity;4.96332482787821e-13!GO:0009057;macromolecule catabolic process;5.32424837410107e-13!GO:0007049;cell cycle;6.73949299121977e-13!GO:0005794;Golgi apparatus;7.13557207014588e-13!GO:0006366;transcription from RNA polymerase II promoter;1.08106341063555e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.46153013970168e-12!GO:0000375;RNA splicing, via transesterification reactions;1.46153013970168e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.46153013970168e-12!GO:0050794;regulation of cellular process;1.93278959772349e-12!GO:0032553;ribonucleotide binding;1.9568879540989e-12!GO:0032555;purine ribonucleotide binding;1.9568879540989e-12!GO:0048193;Golgi vesicle transport;2.0088920927631e-12!GO:0043412;biopolymer modification;2.49037493920268e-12!GO:0006913;nucleocytoplasmic transport;6.93591316080318e-12!GO:0006399;tRNA metabolic process;8.82917002202813e-12!GO:0017076;purine nucleotide binding;8.99861949051815e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.01259689814019e-11!GO:0042773;ATP synthesis coupled electron transport;1.01259689814019e-11!GO:0003743;translation initiation factor activity;1.4739947906428e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.49987114053477e-11!GO:0045271;respiratory chain complex I;1.49987114053477e-11!GO:0005747;mitochondrial respiratory chain complex I;1.49987114053477e-11!GO:0051169;nuclear transport;1.58603310110584e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.36394882429647e-11!GO:0005793;ER-Golgi intermediate compartment;2.43328204155296e-11!GO:0012501;programmed cell death;3.29139822133063e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.00078816087975e-11!GO:0016192;vesicle-mediated transport;5.40097496688294e-11!GO:0006464;protein modification process;5.46091505604041e-11!GO:0005635;nuclear envelope;6.32275404036143e-11!GO:0006915;apoptosis;7.24557554030369e-11!GO:0016604;nuclear body;8.79570308109751e-11!GO:0031965;nuclear membrane;1.41220908300163e-10!GO:0006974;response to DNA damage stimulus;1.51510760237402e-10!GO:0006446;regulation of translational initiation;1.69029192228964e-10!GO:0044248;cellular catabolic process;1.8270282548421e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;2.05470267960125e-10!GO:0006413;translational initiation;2.11329729760024e-10!GO:0006732;coenzyme metabolic process;2.17336231578116e-10!GO:0050789;regulation of biological process;3.2719731045799e-10!GO:0017038;protein import;4.3658474527513e-10!GO:0006364;rRNA processing;7.60395195568855e-10!GO:0006323;DNA packaging;8.56352340598503e-10!GO:0008219;cell death;9.98934060478256e-10!GO:0016265;death;9.98934060478256e-10!GO:0005524;ATP binding;1.20881863005352e-09!GO:0016072;rRNA metabolic process;1.23093857676118e-09!GO:0051276;chromosome organization and biogenesis;1.45894841194819e-09!GO:0009259;ribonucleotide metabolic process;1.57693988345908e-09!GO:0006163;purine nucleotide metabolic process;1.64156565110151e-09!GO:0022402;cell cycle process;2.04795017784014e-09!GO:0008639;small protein conjugating enzyme activity;2.28200792701803e-09!GO:0043687;post-translational protein modification;2.2863387226537e-09!GO:0044453;nuclear membrane part;2.61691981332048e-09!GO:0009150;purine ribonucleotide metabolic process;2.62128617004868e-09!GO:0032559;adenyl ribonucleotide binding;2.65536126371683e-09!GO:0016607;nuclear speck;2.86985217165846e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.39296670079493e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.57485252644397e-09!GO:0004812;aminoacyl-tRNA ligase activity;3.57485252644397e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.57485252644397e-09!GO:0004842;ubiquitin-protein ligase activity;4.37097045736746e-09!GO:0008565;protein transporter activity;4.61336420383514e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.54762572735209e-09!GO:0043038;amino acid activation;9.82290601853093e-09!GO:0006418;tRNA aminoacylation for protein translation;9.82290601853093e-09!GO:0043039;tRNA aminoacylation;9.82290601853093e-09!GO:0019787;small conjugating protein ligase activity;1.09331136423817e-08!GO:0006164;purine nucleotide biosynthetic process;1.32059099018628e-08!GO:0030554;adenyl nucleotide binding;1.3927642089182e-08!GO:0048523;negative regulation of cellular process;1.43111930863832e-08!GO:0009055;electron carrier activity;1.43111930863832e-08!GO:0005789;endoplasmic reticulum membrane;1.7146860977253e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.10130747430992e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.30733033175322e-08!GO:0005788;endoplasmic reticulum lumen;2.30756687163288e-08!GO:0019222;regulation of metabolic process;2.52413976968032e-08!GO:0065004;protein-DNA complex assembly;2.68767239223208e-08!GO:0065002;intracellular protein transport across a membrane;2.723277633099e-08!GO:0009260;ribonucleotide biosynthetic process;2.74075833962729e-08!GO:0005643;nuclear pore;3.29495534906656e-08!GO:0006281;DNA repair;3.90047649056714e-08!GO:0006461;protein complex assembly;4.47919622038931e-08!GO:0005694;chromosome;5.09254159277986e-08!GO:0016881;acid-amino acid ligase activity;5.67780047596269e-08!GO:0006333;chromatin assembly or disassembly;6.65327780655302e-08!GO:0003924;GTPase activity;9.94374320807614e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.03463242538979e-07!GO:0009060;aerobic respiration;1.26735762819274e-07!GO:0008026;ATP-dependent helicase activity;1.31738593139274e-07!GO:0042623;ATPase activity, coupled;1.61733277644555e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.62822840066565e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.71921154187332e-07!GO:0007005;mitochondrion organization and biogenesis;1.73186563457092e-07!GO:0050657;nucleic acid transport;1.82856284145341e-07!GO:0051236;establishment of RNA localization;1.82856284145341e-07!GO:0050658;RNA transport;1.82856284145341e-07!GO:0000278;mitotic cell cycle;1.8437759776768e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.84800197706232e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.84800197706232e-07!GO:0009141;nucleoside triphosphate metabolic process;1.90842174831386e-07!GO:0004386;helicase activity;2.11758984181621e-07!GO:0016887;ATPase activity;2.13767308003059e-07!GO:0006403;RNA localization;2.19010993003702e-07!GO:0051726;regulation of cell cycle;2.29184043542926e-07!GO:0042981;regulation of apoptosis;2.3766138086583e-07!GO:0045333;cellular respiration;2.4299310191464e-07!GO:0000074;regulation of progression through cell cycle;2.52614407633602e-07!GO:0030532;small nuclear ribonucleoprotein complex;2.55352874178166e-07!GO:0016564;transcription repressor activity;2.7529900562207e-07!GO:0009719;response to endogenous stimulus;2.80141551243468e-07!GO:0043067;regulation of programmed cell death;3.01070921753585e-07!GO:0051188;cofactor biosynthetic process;3.54727837717516e-07!GO:0048519;negative regulation of biological process;3.56350430509046e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.65411976720928e-07!GO:0005667;transcription factor complex;4.69696231325544e-07!GO:0030120;vesicle coat;4.69696231325544e-07!GO:0030662;coated vesicle membrane;4.69696231325544e-07!GO:0051170;nuclear import;5.54982627936719e-07!GO:0000785;chromatin;5.54982627936719e-07!GO:0015986;ATP synthesis coupled proton transport;6.29736591504732e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.29736591504732e-07!GO:0046930;pore complex;6.4887311465427e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.73778738544138e-07!GO:0003714;transcription corepressor activity;8.14557768152713e-07!GO:0016563;transcription activator activity;8.52074195209917e-07!GO:0006606;protein import into nucleus;9.43471162262735e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.78083615757669e-07!GO:0046034;ATP metabolic process;9.91509119902837e-07!GO:0051246;regulation of protein metabolic process;1.05357433936071e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.1032151588329e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.1032151588329e-06!GO:0003713;transcription coactivator activity;1.32707656977403e-06!GO:0019829;cation-transporting ATPase activity;1.43361350156406e-06!GO:0048475;coated membrane;1.47118973060213e-06!GO:0030117;membrane coat;1.47118973060213e-06!GO:0006334;nucleosome assembly;1.53765522630432e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.78188503046562e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.01638417981316e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.01638417981316e-06!GO:0043069;negative regulation of programmed cell death;2.10575376082113e-06!GO:0044427;chromosomal part;2.14735283396072e-06!GO:0031252;leading edge;2.15151863909834e-06!GO:0043066;negative regulation of apoptosis;2.87882307146518e-06!GO:0031497;chromatin assembly;2.971165363484e-06!GO:0043566;structure-specific DNA binding;3.23161934749845e-06!GO:0006099;tricarboxylic acid cycle;3.24064486755741e-06!GO:0046356;acetyl-CoA catabolic process;3.24064486755741e-06!GO:0006350;transcription;3.42459316571522e-06!GO:0006916;anti-apoptosis;3.42459316571522e-06!GO:0003697;single-stranded DNA binding;3.93118621322895e-06!GO:0006260;DNA replication;4.4668684449687e-06!GO:0032446;protein modification by small protein conjugation;4.56464447022215e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.60508996647916e-06!GO:0008092;cytoskeletal protein binding;4.60596190779566e-06!GO:0051187;cofactor catabolic process;4.7377187382854e-06!GO:0016469;proton-transporting two-sector ATPase complex;4.75782378990913e-06!GO:0031324;negative regulation of cellular metabolic process;5.00361633647375e-06!GO:0016567;protein ubiquitination;5.57908980132119e-06!GO:0031323;regulation of cellular metabolic process;5.85210117320296e-06!GO:0015078;hydrogen ion transmembrane transporter activity;5.85210117320296e-06!GO:0009056;catabolic process;6.03298298119137e-06!GO:0016568;chromatin modification;6.41252020913638e-06!GO:0004298;threonine endopeptidase activity;6.71399860014533e-06!GO:0005525;GTP binding;7.03339629524096e-06!GO:0065007;biological regulation;7.27671035051686e-06!GO:0051028;mRNA transport;7.28413939182944e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.40637687728909e-06!GO:0009109;coenzyme catabolic process;7.57252906292066e-06!GO:0005762;mitochondrial large ribosomal subunit;8.28400951505304e-06!GO:0000315;organellar large ribosomal subunit;8.28400951505304e-06!GO:0030036;actin cytoskeleton organization and biogenesis;8.32437482327991e-06!GO:0005768;endosome;9.36717556262285e-06!GO:0006084;acetyl-CoA metabolic process;9.77035351242534e-06!GO:0016481;negative regulation of transcription;1.00294253202695e-05!GO:0006754;ATP biosynthetic process;1.00827171138311e-05!GO:0006753;nucleoside phosphate metabolic process;1.00827171138311e-05!GO:0045259;proton-transporting ATP synthase complex;1.11540159427881e-05!GO:0000245;spliceosome assembly;1.1341897015637e-05!GO:0045786;negative regulation of progression through cell cycle;1.32478727999473e-05!GO:0030029;actin filament-based process;1.39306990632618e-05!GO:0009108;coenzyme biosynthetic process;1.52064463852036e-05!GO:0000151;ubiquitin ligase complex;2.09991092008709e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.16018751250863e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.2530090288388e-05!GO:0006613;cotranslational protein targeting to membrane;2.35070472774945e-05!GO:0010468;regulation of gene expression;2.5546109920313e-05!GO:0003724;RNA helicase activity;2.67949578014455e-05!GO:0009117;nucleotide metabolic process;2.78264852073092e-05!GO:0051789;response to protein stimulus;2.90703551367321e-05!GO:0006986;response to unfolded protein;2.90703551367321e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.70311294310889e-05!GO:0043021;ribonucleoprotein binding;3.81225518975763e-05!GO:0015630;microtubule cytoskeleton;4.55023847635945e-05!GO:0051427;hormone receptor binding;4.99494436406056e-05!GO:0003899;DNA-directed RNA polymerase activity;5.14623134688682e-05!GO:0009892;negative regulation of metabolic process;5.46565154254204e-05!GO:0044440;endosomal part;5.64343613845726e-05!GO:0010008;endosome membrane;5.64343613845726e-05!GO:0030867;rough endoplasmic reticulum membrane;5.68346253972029e-05!GO:0000314;organellar small ribosomal subunit;5.77626641229713e-05!GO:0005763;mitochondrial small ribosomal subunit;5.77626641229713e-05!GO:0016779;nucleotidyltransferase activity;6.29176959348686e-05!GO:0006752;group transfer coenzyme metabolic process;6.49364620821117e-05!GO:0044431;Golgi apparatus part;7.73097208600269e-05!GO:0005798;Golgi-associated vesicle;8.21012805027279e-05!GO:0032561;guanyl ribonucleotide binding;8.7345498338969e-05!GO:0019001;guanyl nucleotide binding;8.7345498338969e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.03892990678308e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;9.25519918544586e-05!GO:0007010;cytoskeleton organization and biogenesis;9.74854688384241e-05!GO:0035257;nuclear hormone receptor binding;0.000103078652271804!GO:0015980;energy derivation by oxidation of organic compounds;0.000110940915046615!GO:0006793;phosphorus metabolic process;0.000118040798486969!GO:0006796;phosphate metabolic process;0.000118040798486969!GO:0016853;isomerase activity;0.000122949600673386!GO:0005770;late endosome;0.000126282169974841!GO:0045454;cell redox homeostasis;0.000132082507381729!GO:0016740;transferase activity;0.000146645481338852!GO:0022403;cell cycle phase;0.000155630412164155!GO:0008033;tRNA processing;0.000156873034394282!GO:0043623;cellular protein complex assembly;0.000160119231077928!GO:0008361;regulation of cell size;0.000171012338296903!GO:0033116;ER-Golgi intermediate compartment membrane;0.000173965013636648!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000177296194367938!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000199774845965004!GO:0032774;RNA biosynthetic process;0.000211488195472632!GO:0006351;transcription, DNA-dependent;0.000228395792593765!GO:0016049;cell growth;0.000235991547592288!GO:0016859;cis-trans isomerase activity;0.000263794300852387!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000266757296049684!GO:0000087;M phase of mitotic cell cycle;0.000283814392705208!GO:0048522;positive regulation of cellular process;0.000314542033051241!GO:0005048;signal sequence binding;0.00031616360089966!GO:0007067;mitosis;0.000322221543316245!GO:0016023;cytoplasmic membrane-bound vesicle;0.000323479098774657!GO:0001558;regulation of cell growth;0.000347940009073267!GO:0044452;nucleolar part;0.000348869188124996!GO:0031988;membrane-bound vesicle;0.000372455851377683!GO:0008186;RNA-dependent ATPase activity;0.000375722089877778!GO:0043681;protein import into mitochondrion;0.000421073792699355!GO:0005769;early endosome;0.000466235516087734!GO:0008250;oligosaccharyl transferase complex;0.000470063888947622!GO:0016310;phosphorylation;0.000470675632468597!GO:0006626;protein targeting to mitochondrion;0.000471277379616838!GO:0007517;muscle development;0.000482020721171413!GO:0051168;nuclear export;0.000496408271911048!GO:0006612;protein targeting to membrane;0.000563161433897624!GO:0045449;regulation of transcription;0.00056409110528681!GO:0005791;rough endoplasmic reticulum;0.000670756477011781!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000670756477011781!GO:0045892;negative regulation of transcription, DNA-dependent;0.000677907738957472!GO:0008654;phospholipid biosynthetic process;0.000689002861709705!GO:0003729;mRNA binding;0.000689002861709705!GO:0003702;RNA polymerase II transcription factor activity;0.000703168537351992!GO:0005885;Arp2/3 protein complex;0.000735622165927626!GO:0005905;coated pit;0.000744698283244778!GO:0005773;vacuole;0.000804774108312039!GO:0051101;regulation of DNA binding;0.000806231567802502!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000843600820757185!GO:0004576;oligosaccharyl transferase activity;0.000879211149953968!GO:0016363;nuclear matrix;0.000989064695883598!GO:0000786;nucleosome;0.00101823940171208!GO:0031982;vesicle;0.00104250955080165!GO:0000049;tRNA binding;0.00105321083737478!GO:0004004;ATP-dependent RNA helicase activity;0.00109226883978936!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00109702746049544!GO:0005813;centrosome;0.00110580047899703!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00110580047899703!GO:0051920;peroxiredoxin activity;0.00110580047899703!GO:0030880;RNA polymerase complex;0.00110903487914604!GO:0045941;positive regulation of transcription;0.00119577167247969!GO:0030663;COPI coated vesicle membrane;0.00122396276511688!GO:0030126;COPI vesicle coat;0.00122396276511688!GO:0019843;rRNA binding;0.00122442976060173!GO:0031410;cytoplasmic vesicle;0.00124241820830461!GO:0019899;enzyme binding;0.00125289526959909!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00129948549577853!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00136698516799408!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00141351055510939!GO:0016491;oxidoreductase activity;0.00142724917576156!GO:0006414;translational elongation;0.0014878542839555!GO:0006383;transcription from RNA polymerase III promoter;0.00149021087152625!GO:0019867;outer membrane;0.00150394611592717!GO:0007006;mitochondrial membrane organization and biogenesis;0.00151322570416425!GO:0000139;Golgi membrane;0.00151564351862892!GO:0051329;interphase of mitotic cell cycle;0.00153891831911427!GO:0006839;mitochondrial transport;0.00157181392243172!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00157252553701193!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00157252553701193!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00157252553701193!GO:0018196;peptidyl-asparagine modification;0.00159714592057419!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00159714592057419!GO:0016044;membrane organization and biogenesis;0.00167050658005808!GO:0030133;transport vesicle;0.00167050658005808!GO:0031968;organelle outer membrane;0.00176132641662262!GO:0051252;regulation of RNA metabolic process;0.00188177837535638!GO:0046474;glycerophospholipid biosynthetic process;0.0019538782364616!GO:0043488;regulation of mRNA stability;0.0019538782364616!GO:0043487;regulation of RNA stability;0.0019538782364616!GO:0015629;actin cytoskeleton;0.00197120510591928!GO:0006891;intra-Golgi vesicle-mediated transport;0.00227634009366293!GO:0006402;mRNA catabolic process;0.00231225618341137!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00239794202911627!GO:0000428;DNA-directed RNA polymerase complex;0.00239794202911627!GO:0005741;mitochondrial outer membrane;0.00243370943055473!GO:0051301;cell division;0.00244148948155762!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00258094290973512!GO:0007243;protein kinase cascade;0.00269566299766933!GO:0003746;translation elongation factor activity;0.00269566299766933!GO:0030137;COPI-coated vesicle;0.00269566299766933!GO:0043284;biopolymer biosynthetic process;0.00271994035294951!GO:0048500;signal recognition particle;0.00278063314316872!GO:0005815;microtubule organizing center;0.00280764765585376!GO:0045893;positive regulation of transcription, DNA-dependent;0.00286676444272341!GO:0031072;heat shock protein binding;0.00300924863524379!GO:0000059;protein import into nucleus, docking;0.00309809688249737!GO:0030027;lamellipodium;0.00322466575798211!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0033793201942687!GO:0000323;lytic vacuole;0.00341839611713484!GO:0005764;lysosome;0.00341839611713484!GO:0001726;ruffle;0.00344128761438396!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00360399743837259!GO:0005865;striated muscle thin filament;0.00367017439738487!GO:0003690;double-stranded DNA binding;0.00368823144448739!GO:0007264;small GTPase mediated signal transduction;0.00371654672399326!GO:0006595;polyamine metabolic process;0.00382629977295836!GO:0051087;chaperone binding;0.00385132811596437!GO:0048468;cell development;0.00386894736370662!GO:0030132;clathrin coat of coated pit;0.00387732302839089!GO:0046489;phosphoinositide biosynthetic process;0.00407318887060081!GO:0030176;integral to endoplasmic reticulum membrane;0.00418815559916163!GO:0051325;interphase;0.00432060508516751!GO:0016741;transferase activity, transferring one-carbon groups;0.00452816074922229!GO:0009165;nucleotide biosynthetic process;0.00469114088924894!GO:0004177;aminopeptidase activity;0.00477066889183529!GO:0003779;actin binding;0.00496078859686225!GO:0051098;regulation of binding;0.00506186757099633!GO:0006352;transcription initiation;0.00523715172945891!GO:0048471;perinuclear region of cytoplasm;0.00532264181570622!GO:0006355;regulation of transcription, DNA-dependent;0.0054237246404718!GO:0008139;nuclear localization sequence binding;0.0054237246404718!GO:0007050;cell cycle arrest;0.00554311286929326!GO:0030134;ER to Golgi transport vesicle;0.00563818462312289!GO:0008312;7S RNA binding;0.00601493466034539!GO:0008168;methyltransferase activity;0.00607905909877645!GO:0030118;clathrin coat;0.00659488146121808!GO:0051539;4 iron, 4 sulfur cluster binding;0.00669662842146405!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00675605312920877!GO:0045047;protein targeting to ER;0.00675605312920877!GO:0017166;vinculin binding;0.00693514009307653!GO:0030041;actin filament polymerization;0.00728737041108406!GO:0016787;hydrolase activity;0.00739681786923896!GO:0006401;RNA catabolic process;0.0075516091908728!GO:0001725;stress fiber;0.00757500118178288!GO:0032432;actin filament bundle;0.00757500118178288!GO:0006261;DNA-dependent DNA replication;0.00772556263734679!GO:0043022;ribosome binding;0.00783032925414311!GO:0030521;androgen receptor signaling pathway;0.00794790590745293!GO:0005684;U2-dependent spliceosome;0.00796467045423476!GO:0065009;regulation of a molecular function;0.00797581057205523!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00804611511331199!GO:0003684;damaged DNA binding;0.00807101746917321!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00814865760567692!GO:0008180;signalosome;0.0083312668209169!GO:0016251;general RNA polymerase II transcription factor activity;0.00834522108677177!GO:0006405;RNA export from nucleus;0.00834522108677177!GO:0006509;membrane protein ectodomain proteolysis;0.00859587583664647!GO:0033619;membrane protein proteolysis;0.00859587583664647!GO:0051287;NAD binding;0.00891628177251609!GO:0035258;steroid hormone receptor binding;0.00931586966549275!GO:0030658;transport vesicle membrane;0.00931586966549275!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00937435843500406!GO:0051128;regulation of cellular component organization and biogenesis;0.00958935503269202!GO:0046483;heterocycle metabolic process;0.00963091753994858!GO:0043433;negative regulation of transcription factor activity;0.00989098177569152!GO:0000279;M phase;0.00993850231222478!GO:0040008;regulation of growth;0.00998467616273909!GO:0003711;transcription elongation regulator activity;0.010234600313857!GO:0006740;NADPH regeneration;0.0104878188799242!GO:0006098;pentose-phosphate shunt;0.0104878188799242!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0107089622285088!GO:0048518;positive regulation of biological process;0.0109389313326346!GO:0042802;identical protein binding;0.0115035186898168!GO:0014706;striated muscle development;0.0116672980470638!GO:0030127;COPII vesicle coat;0.0118589686166497!GO:0012507;ER to Golgi transport vesicle membrane;0.0118589686166497!GO:0005869;dynactin complex;0.012170502802455!GO:0008154;actin polymerization and/or depolymerization;0.0121848657362762!GO:0008629;induction of apoptosis by intracellular signals;0.0123561926459102!GO:0005832;chaperonin-containing T-complex;0.0131073139276536!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0132708360255782!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0132708360255782!GO:0016272;prefoldin complex;0.0132961954492952!GO:0048144;fibroblast proliferation;0.0132961954492952!GO:0048145;regulation of fibroblast proliferation;0.0132961954492952!GO:0006091;generation of precursor metabolites and energy;0.0135633837826524!GO:0009451;RNA modification;0.0138012588755413!GO:0001952;regulation of cell-matrix adhesion;0.0139780061917571!GO:0006650;glycerophospholipid metabolic process;0.0143448841859507!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0143448841859507!GO:0048146;positive regulation of fibroblast proliferation;0.0143907129047296!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0144199225838244!GO:0048487;beta-tubulin binding;0.014441477366684!GO:0006338;chromatin remodeling;0.0148903318077591!GO:0009303;rRNA transcription;0.0150497582782366!GO:0031124;mRNA 3'-end processing;0.0155480055488266!GO:0006289;nucleotide-excision repair;0.0155668759743081!GO:0006984;ER-nuclear signaling pathway;0.0157188427955979!GO:0030833;regulation of actin filament polymerization;0.0157845545623628!GO:0031901;early endosome membrane;0.0158113505805104!GO:0008632;apoptotic program;0.0161952143456421!GO:0015631;tubulin binding;0.0166097360783045!GO:0032507;maintenance of cellular protein localization;0.0176676903566173!GO:0035035;histone acetyltransferase binding;0.0177995729002515!GO:0007519;skeletal muscle development;0.0180152438155099!GO:0000339;RNA cap binding;0.0182286328079919!GO:0016197;endosome transport;0.0182286328079919!GO:0007040;lysosome organization and biogenesis;0.0184602614037149!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0184602614037149!GO:0006778;porphyrin metabolic process;0.0184602614037149!GO:0033013;tetrapyrrole metabolic process;0.0184602614037149!GO:0003678;DNA helicase activity;0.0185400724555934!GO:0000209;protein polyubiquitination;0.0186777979592324!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0186777979592324!GO:0015002;heme-copper terminal oxidase activity;0.0186777979592324!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0186777979592324!GO:0004129;cytochrome-c oxidase activity;0.0186777979592324!GO:0003677;DNA binding;0.0188718615680536!GO:0031970;organelle envelope lumen;0.0193104272203182!GO:0016584;nucleosome positioning;0.0193371534617612!GO:0051059;NF-kappaB binding;0.0195876890885237!GO:0031529;ruffle organization and biogenesis;0.0199529017124923!GO:0043065;positive regulation of apoptosis;0.0199992890514251!GO:0008097;5S rRNA binding;0.0202885579238127!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0204009740975886!GO:0005862;muscle thin filament tropomyosin;0.0204502066233357!GO:0003682;chromatin binding;0.0204615388510946!GO:0030032;lamellipodium biogenesis;0.0204976335089952!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0207537830996446!GO:0006611;protein export from nucleus;0.0209281721005657!GO:0051540;metal cluster binding;0.0209710486236799!GO:0051536;iron-sulfur cluster binding;0.0209710486236799!GO:0006497;protein amino acid lipidation;0.0210192712731053!GO:0046467;membrane lipid biosynthetic process;0.0210556295509348!GO:0008637;apoptotic mitochondrial changes;0.0214285811914736!GO:0044420;extracellular matrix part;0.021950430336211!GO:0042158;lipoprotein biosynthetic process;0.021950430336211!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0222026726019679!GO:0000096;sulfur amino acid metabolic process;0.0228234216873565!GO:0005758;mitochondrial intermembrane space;0.0231509159119394!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0234808195008413!GO:0015399;primary active transmembrane transporter activity;0.0234808195008413!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0235174898313683!GO:0033043;regulation of organelle organization and biogenesis;0.0235174898313683!GO:0006376;mRNA splice site selection;0.0238535549749913!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0238535549749913!GO:0030660;Golgi-associated vesicle membrane;0.0239672150001166!GO:0006506;GPI anchor biosynthetic process;0.0240251389637048!GO:0005874;microtubule;0.0241561107670289!GO:0005669;transcription factor TFIID complex;0.0243651730380979!GO:0043068;positive regulation of programmed cell death;0.024610314786016!GO:0005637;nuclear inner membrane;0.0254042811682384!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0257915616113296!GO:0010257;NADH dehydrogenase complex assembly;0.0257915616113296!GO:0033108;mitochondrial respiratory chain complex assembly;0.0257915616113296!GO:0008652;amino acid biosynthetic process;0.0258625282200519!GO:0033673;negative regulation of kinase activity;0.0258625282200519!GO:0006469;negative regulation of protein kinase activity;0.0258625282200519!GO:0042168;heme metabolic process;0.0259647097602689!GO:0006354;RNA elongation;0.0260167198156227!GO:0030031;cell projection biogenesis;0.0260167198156227!GO:0006520;amino acid metabolic process;0.0266710356673712!GO:0046822;regulation of nucleocytoplasmic transport;0.0267590106718442!GO:0007021;tubulin folding;0.0268353948227944!GO:0008538;proteasome activator activity;0.0269544801100037!GO:0005657;replication fork;0.0276235907023109!GO:0050681;androgen receptor binding;0.027931165924039!GO:0000792;heterochromatin;0.0287765737143557!GO:0031625;ubiquitin protein ligase binding;0.0289408967853787!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0295581596669142!GO:0006897;endocytosis;0.0301081689925105!GO:0010324;membrane invagination;0.0301081689925105!GO:0006505;GPI anchor metabolic process;0.0301944692353994!GO:0001527;microfibril;0.0302957260996073!GO:0008047;enzyme activator activity;0.0308386886908763!GO:0022408;negative regulation of cell-cell adhesion;0.0316522262686459!GO:0007033;vacuole organization and biogenesis;0.0316522262686459!GO:0015992;proton transport;0.031944486793786!GO:0031272;regulation of pseudopodium formation;0.0321354772583145!GO:0031269;pseudopodium formation;0.0321354772583145!GO:0031344;regulation of cell projection organization and biogenesis;0.0321354772583145!GO:0031268;pseudopodium organization and biogenesis;0.0321354772583145!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0321354772583145!GO:0031274;positive regulation of pseudopodium formation;0.0321354772583145!GO:0030119;AP-type membrane coat adaptor complex;0.0324637184216163!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0341395974043767!GO:0051348;negative regulation of transferase activity;0.0341718175932664!GO:0030145;manganese ion binding;0.0345416551405055!GO:0030384;phosphoinositide metabolic process;0.0346323247679452!GO:0006818;hydrogen transport;0.0348319013318463!GO:0030125;clathrin vesicle coat;0.034927108918297!GO:0030665;clathrin coated vesicle membrane;0.034927108918297!GO:0031418;L-ascorbic acid binding;0.0350606796893287!GO:0006607;NLS-bearing substrate import into nucleus;0.0350862171510982!GO:0030503;regulation of cell redox homeostasis;0.0351452241895968!GO:0040029;regulation of gene expression, epigenetic;0.0351452241895968!GO:0006779;porphyrin biosynthetic process;0.0362375787496122!GO:0033014;tetrapyrrole biosynthetic process;0.0362375787496122!GO:0004674;protein serine/threonine kinase activity;0.0365279850121002!GO:0003923;GPI-anchor transamidase activity;0.0367050701214019!GO:0016255;attachment of GPI anchor to protein;0.0367050701214019!GO:0042765;GPI-anchor transamidase complex;0.0367050701214019!GO:0051651;maintenance of cellular localization;0.0373709890808795!GO:0044262;cellular carbohydrate metabolic process;0.037939374576753!GO:0032984;macromolecular complex disassembly;0.0385424879979683!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0393714519004163!GO:0008022;protein C-terminus binding;0.0394672264458221!GO:0004680;casein kinase activity;0.0396247490505067!GO:0004527;exonuclease activity;0.0397354632894975!GO:0030508;thiol-disulfide exchange intermediate activity;0.0400786580802658!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0401742391973327!GO:0030518;steroid hormone receptor signaling pathway;0.0406928159073332!GO:0043624;cellular protein complex disassembly;0.0407880046811104!GO:0022415;viral reproductive process;0.0407880046811104!GO:0005100;Rho GTPase activator activity;0.0415489445204858!GO:0035267;NuA4 histone acetyltransferase complex;0.0417368272672461!GO:0006400;tRNA modification;0.0418422859994075!GO:0006739;NADP metabolic process;0.042321647798904!GO:0000178;exosome (RNase complex);0.0428703428996314!GO:0006596;polyamine biosynthetic process;0.0428703428996314!GO:0032508;DNA duplex unwinding;0.0431966160962864!GO:0032392;DNA geometric change;0.0431966160962864!GO:0051090;regulation of transcription factor activity;0.0434318472318962!GO:0030131;clathrin adaptor complex;0.0434318472318962!GO:0007569;cell aging;0.0434318472318962!GO:0006378;mRNA polyadenylation;0.0438008990095738!GO:0001872;zymosan binding;0.0438008990095738!GO:0001878;response to yeast;0.0438008990095738!GO:0006360;transcription from RNA polymerase I promoter;0.0438008990095738!GO:0006564;L-serine biosynthetic process;0.0439743936918285!GO:0030911;TPR domain binding;0.0451669629194163!GO:0017134;fibroblast growth factor binding;0.0451792583580023!GO:0045185;maintenance of protein localization;0.0456232749852166!GO:0046966;thyroid hormone receptor binding;0.0456232749852166!GO:0001836;release of cytochrome c from mitochondria;0.0457361045738411!GO:0051235;maintenance of localization;0.0461194566511814!GO:0043189;H4/H2A histone acetyltransferase complex;0.0464121725961875!GO:0031902;late endosome membrane;0.0475268811393652!GO:0009112;nucleobase metabolic process;0.0475335129819458!GO:0030659;cytoplasmic vesicle membrane;0.0484426945983708!GO:0005784;translocon complex;0.0486892189041186!GO:0048741;skeletal muscle fiber development;0.0488362672333507!GO:0048747;muscle fiber development;0.0488362672333507!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0490386023667453!GO:0015036;disulfide oxidoreductase activity;0.0496822069878797!GO:0050811;GABA receptor binding;0.0496822069878797 | |||
|sample_id=11281 | |sample_id=11281 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=skeletal muscle | |sample_tissue=skeletal muscle | ||
|top_motifs=RXR{A,B,G}:1.70609303723;SPZ1:1.52355570399;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.49343221303;GTF2A1,2:1.27100804029;NHLH1,2:1.23891535184;EN1,2:1.22534312355;MYBL2:1.22518024761;PATZ1:1.13143357791;ZNF238:1.09518648336;TFAP4:0.995306078112;HES1:0.992344236172;SRF:0.992092808649;HOX{A4,D4}:0.953588146383;GFI1B:0.951523102981;RREB1:0.949778928974;TAL1_TCF{3,4,12}:0.889434201819;PAX5:0.875264636509;GLI1..3:0.858840276329;TFAP2{A,C}:0.779939662754;MYOD1:0.757085280957;FOXD3:0.733267542186;TEAD1:0.728421682677;NR3C1:0.718377497093;GCM1,2:0.694956268152;TLX1..3_NFIC{dimer}:0.677592425717;FOXL1:0.67051845921;bHLH_family:0.667548046843;IKZF1:0.66709375777;KLF4:0.657588839563;EVI1:0.656488643461;TBP:0.656429516403;TP53:0.647025621368;ZIC1..3:0.646634034442;MZF1:0.6307545892;PRDM1:0.629270971698;GTF2I:0.606654468245;LHX3,4:0.603088216671;TFAP2B:0.596101538027;UFEwm:0.594978615567;ALX4:0.584237651711;NKX6-1,2:0.548503189966;MEF2{A,B,C,D}:0.546780206408;ZNF143:0.536718738883;LMO2:0.532640641142;TFCP2:0.52941776784;NKX2-2,8:0.519113502134;NKX3-1:0.516434441542;NFIX:0.501327154599;YY1:0.492064617948;NR6A1:0.48633507516;ELK1,4_GABP{A,B1}:0.485338987685;ZNF148:0.484568504979;HAND1,2:0.444370520835;MAZ:0.430417724667;GATA4:0.424060337464;ZNF384:0.415686968053;POU3F1..4:0.41402697327;NANOG{mouse}:0.413847175585;TBX4,5:0.397403622618;ESR1:0.393838292756;SMAD1..7,9:0.393387880326;ZNF423:0.39331617351;MYFfamily:0.38005750363;SOX17:0.376106171355;NR1H4:0.348315005396;CEBPA,B_DDIT3:0.345178555236;HLF:0.343201920892;MED-1{core}:0.340416982901;HOX{A5,B5}:0.333236333857;MTE{core}:0.324267360609;GZF1:0.301692826826;CDC5L:0.301322125022;PBX1:0.295352959128;HIC1:0.294004995289;NFATC1..3:0.286605506151;RFX1:0.271346935352;PAX1,9:0.264731125315;STAT2,4,6:0.256314372025;RXRA_VDR{dimer}:0.253060428761;SOX{8,9,10}:0.245889127578;EBF1:0.241204715915;ADNP_IRX_SIX_ZHX:0.237599259281;SP1:0.221195473082;STAT1,3:0.218516003715;ZBTB6:0.216679521041;PPARG:0.200094557222;CRX:0.188771640522;NFIL3:0.180498434742;JUN:0.169819019008;REST:0.166467162626;AHR_ARNT_ARNT2:0.154547276899;TOPORS:0.154387228766;NFE2L1:0.127806175218;POU6F1:0.119233372073;XCPE1{core}:0.11530076906;NFE2L2:0.109256079105;HSF1,2:0.0882852718157;BACH2:0.0874525714445;BPTF:0.0792995114562;NRF1:0.075391727636;SOX2:0.0695734727992;FOXM1:0.0677975658321;RBPJ:0.066969712776;HMX1:0.0666821912778;DMAP1_NCOR{1,2}_SMARC:0.0549839836195;CDX1,2,4:0.0528824108976;LEF1_TCF7_TCF7L1,2:0.0518814827019;NR5A1,2:0.0410601471077;TFDP1:0.0148081011051;DBP:0.0144364462913;SOX5:-0.00589313809055;RUNX1..3:-0.00730436260903;EP300:-0.0114443709677;PAX8:-0.0145176534922;HNF1A:-0.0160540026501;CUX2:-0.0231838456743;GFI1:-0.0367791795472;FOXO1,3,4:-0.0470417980422;MAFB:-0.0568941729171;PRRX1,2:-0.0594376543756;FOXQ1:-0.0665911848351;ZFP161:-0.0714943973549;FOS_FOS{B,L1}_JUN{B,D}:-0.0720774819177;NFE2:-0.0809903027864;TGIF1:-0.0844421831823;TEF:-0.110646756333;T:-0.110930509003;ESRRA:-0.127223107752;HOX{A6,A7,B6,B7}:-0.130381937835;EGR1..3:-0.143955518281;CREB1:-0.145146832411;NKX2-3_NKX2-5:-0.168051329463;NFKB1_REL_RELA:-0.173250896756;E2F1..5:-0.177683585697;FOXP1:-0.177959767816;ONECUT1,2:-0.18091979169;PDX1:-0.192169308887;HIF1A:-0.207420450935;IRF1,2:-0.210500939889;FOSL2:-0.224889276919;MYB:-0.24390967448;POU2F1..3:-0.25643677066;XBP1:-0.258034258567;RFX2..5_RFXANK_RFXAP:-0.27361445769;AIRE:-0.279007628554;ATF2:-0.28170118858;SNAI1..3:-0.298894457883;STAT5{A,B}:-0.321634344639;MTF1:-0.323278834046;FOX{F1,F2,J1}:-0.325134228002;ATF4:-0.331303900081;HNF4A_NR2F1,2:-0.344576018752;AR:-0.382976615025;PAX6:-0.399950853862;POU1F1:-0.40675367015;POU5F1:-0.419314548544;TLX2:-0.421435635906;IRF7:-0.428223439915;NKX3-2:-0.439016886089;PAX2:-0.44721247413;NANOG:-0.47749645609;HMGA1,2:-0.479026018799;SPI1:-0.486878611591;PITX1..3:-0.504726763144;ARID5B:-0.508600133302;ATF6:-0.51929172402;SPIB:-0.531471167123;NFY{A,B,C}:-0.554737837235;ELF1,2,4:-0.563447149192;FOX{D1,D2}:-0.578197465175;PAX4:-0.600773474598;BREu{core}:-0.607123405268;ZEB1:-0.607552222736;IKZF2:-0.616549096814;ALX1:-0.619093034983;OCT4_SOX2{dimer}:-0.621137628278;PAX3,7:-0.632349082914;NKX2-1,4:-0.651358610336;RORA:-0.655353691205;FOXA2:-0.658269669947;ETS1,2:-0.66768586594;HBP1_HMGB_SSRP1_UBTF:-0.691712283599;VSX1,2:-0.708172583561;SREBF1,2:-0.716762984774;FOXP3:-0.726436603363;GATA6:-0.731511227833;FOXN1:-0.840043934939;ATF5_CREB3:-0.862302982002;FOX{I1,J2}:-1.09365176531;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.18851064258;ZBTB16:-1.21658069388;HOXA9_MEIS1:-1.42550162421 | |top_motifs=RXR{A,B,G}:1.70609303723;SPZ1:1.52355570399;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.49343221303;GTF2A1,2:1.27100804029;NHLH1,2:1.23891535184;EN1,2:1.22534312355;MYBL2:1.22518024761;PATZ1:1.13143357791;ZNF238:1.09518648336;TFAP4:0.995306078112;HES1:0.992344236172;SRF:0.992092808649;HOX{A4,D4}:0.953588146383;GFI1B:0.951523102981;RREB1:0.949778928974;TAL1_TCF{3,4,12}:0.889434201819;PAX5:0.875264636509;GLI1..3:0.858840276329;TFAP2{A,C}:0.779939662754;MYOD1:0.757085280957;FOXD3:0.733267542186;TEAD1:0.728421682677;NR3C1:0.718377497093;GCM1,2:0.694956268152;TLX1..3_NFIC{dimer}:0.677592425717;FOXL1:0.67051845921;bHLH_family:0.667548046843;IKZF1:0.66709375777;KLF4:0.657588839563;EVI1:0.656488643461;TBP:0.656429516403;TP53:0.647025621368;ZIC1..3:0.646634034442;MZF1:0.6307545892;PRDM1:0.629270971698;GTF2I:0.606654468245;LHX3,4:0.603088216671;TFAP2B:0.596101538027;UFEwm:0.594978615567;ALX4:0.584237651711;NKX6-1,2:0.548503189966;MEF2{A,B,C,D}:0.546780206408;ZNF143:0.536718738883;LMO2:0.532640641142;TFCP2:0.52941776784;NKX2-2,8:0.519113502134;NKX3-1:0.516434441542;NFIX:0.501327154599;YY1:0.492064617948;NR6A1:0.48633507516;ELK1,4_GABP{A,B1}:0.485338987685;ZNF148:0.484568504979;HAND1,2:0.444370520835;MAZ:0.430417724667;GATA4:0.424060337464;ZNF384:0.415686968053;POU3F1..4:0.41402697327;NANOG{mouse}:0.413847175585;TBX4,5:0.397403622618;ESR1:0.393838292756;SMAD1..7,9:0.393387880326;ZNF423:0.39331617351;MYFfamily:0.38005750363;SOX17:0.376106171355;NR1H4:0.348315005396;CEBPA,B_DDIT3:0.345178555236;HLF:0.343201920892;MED-1{core}:0.340416982901;HOX{A5,B5}:0.333236333857;MTE{core}:0.324267360609;GZF1:0.301692826826;CDC5L:0.301322125022;PBX1:0.295352959128;HIC1:0.294004995289;NFATC1..3:0.286605506151;RFX1:0.271346935352;PAX1,9:0.264731125315;STAT2,4,6:0.256314372025;RXRA_VDR{dimer}:0.253060428761;SOX{8,9,10}:0.245889127578;EBF1:0.241204715915;ADNP_IRX_SIX_ZHX:0.237599259281;SP1:0.221195473082;STAT1,3:0.218516003715;ZBTB6:0.216679521041;PPARG:0.200094557222;CRX:0.188771640522;NFIL3:0.180498434742;JUN:0.169819019008;REST:0.166467162626;AHR_ARNT_ARNT2:0.154547276899;TOPORS:0.154387228766;NFE2L1:0.127806175218;POU6F1:0.119233372073;XCPE1{core}:0.11530076906;NFE2L2:0.109256079105;HSF1,2:0.0882852718157;BACH2:0.0874525714445;BPTF:0.0792995114562;NRF1:0.075391727636;SOX2:0.0695734727992;FOXM1:0.0677975658321;RBPJ:0.066969712776;HMX1:0.0666821912778;DMAP1_NCOR{1,2}_SMARC:0.0549839836195;CDX1,2,4:0.0528824108976;LEF1_TCF7_TCF7L1,2:0.0518814827019;NR5A1,2:0.0410601471077;TFDP1:0.0148081011051;DBP:0.0144364462913;SOX5:-0.00589313809055;RUNX1..3:-0.00730436260903;EP300:-0.0114443709677;PAX8:-0.0145176534922;HNF1A:-0.0160540026501;CUX2:-0.0231838456743;GFI1:-0.0367791795472;FOXO1,3,4:-0.0470417980422;MAFB:-0.0568941729171;PRRX1,2:-0.0594376543756;FOXQ1:-0.0665911848351;ZFP161:-0.0714943973549;FOS_FOS{B,L1}_JUN{B,D}:-0.0720774819177;NFE2:-0.0809903027864;TGIF1:-0.0844421831823;TEF:-0.110646756333;T:-0.110930509003;ESRRA:-0.127223107752;HOX{A6,A7,B6,B7}:-0.130381937835;EGR1..3:-0.143955518281;CREB1:-0.145146832411;NKX2-3_NKX2-5:-0.168051329463;NFKB1_REL_RELA:-0.173250896756;E2F1..5:-0.177683585697;FOXP1:-0.177959767816;ONECUT1,2:-0.18091979169;PDX1:-0.192169308887;HIF1A:-0.207420450935;IRF1,2:-0.210500939889;FOSL2:-0.224889276919;MYB:-0.24390967448;POU2F1..3:-0.25643677066;XBP1:-0.258034258567;RFX2..5_RFXANK_RFXAP:-0.27361445769;AIRE:-0.279007628554;ATF2:-0.28170118858;SNAI1..3:-0.298894457883;STAT5{A,B}:-0.321634344639;MTF1:-0.323278834046;FOX{F1,F2,J1}:-0.325134228002;ATF4:-0.331303900081;HNF4A_NR2F1,2:-0.344576018752;AR:-0.382976615025;PAX6:-0.399950853862;POU1F1:-0.40675367015;POU5F1:-0.419314548544;TLX2:-0.421435635906;IRF7:-0.428223439915;NKX3-2:-0.439016886089;PAX2:-0.44721247413;NANOG:-0.47749645609;HMGA1,2:-0.479026018799;SPI1:-0.486878611591;PITX1..3:-0.504726763144;ARID5B:-0.508600133302;ATF6:-0.51929172402;SPIB:-0.531471167123;NFY{A,B,C}:-0.554737837235;ELF1,2,4:-0.563447149192;FOX{D1,D2}:-0.578197465175;PAX4:-0.600773474598;BREu{core}:-0.607123405268;ZEB1:-0.607552222736;IKZF2:-0.616549096814;ALX1:-0.619093034983;OCT4_SOX2{dimer}:-0.621137628278;PAX3,7:-0.632349082914;NKX2-1,4:-0.651358610336;RORA:-0.655353691205;FOXA2:-0.658269669947;ETS1,2:-0.66768586594;HBP1_HMGB_SSRP1_UBTF:-0.691712283599;VSX1,2:-0.708172583561;SREBF1,2:-0.716762984774;FOXP3:-0.726436603363;GATA6:-0.731511227833;FOXN1:-0.840043934939;ATF5_CREB3:-0.862302982002;FOX{I1,J2}:-1.09365176531;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.18851064258;ZBTB16:-1.21658069388;HOXA9_MEIS1:-1.42550162421 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11281-116I3;search_select_hide=table117:FF:11281-116I3 | |||
}} | }} | ||
Latest revision as of 16:30, 3 June 2020
| Name: | Skeletal Muscle Cells, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11083 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11083
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11083
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.286 |
| 10 | 10 | 0.0288 |
| 100 | 100 | 0.917 |
| 101 | 101 | 0.389 |
| 102 | 102 | 0.789 |
| 103 | 103 | 0.693 |
| 104 | 104 | 0.168 |
| 105 | 105 | 0.762 |
| 106 | 106 | 0.261 |
| 107 | 107 | 0.154 |
| 108 | 108 | 0.735 |
| 109 | 109 | 0.641 |
| 11 | 11 | 0.996 |
| 110 | 110 | 0.263 |
| 111 | 111 | 0.192 |
| 112 | 112 | 0.273 |
| 113 | 113 | 0.669 |
| 114 | 114 | 0.205 |
| 115 | 115 | 0.806 |
| 116 | 116 | 0.112 |
| 117 | 117 | 0.867 |
| 118 | 118 | 0.163 |
| 119 | 119 | 0.842 |
| 12 | 12 | 0.497 |
| 120 | 120 | 0.29 |
| 121 | 121 | 0.737 |
| 122 | 122 | 0.0247 |
| 123 | 123 | 0.00166 |
| 124 | 124 | 0.247 |
| 125 | 125 | 0.869 |
| 126 | 126 | 0.441 |
| 127 | 127 | 0.432 |
| 128 | 128 | 0.579 |
| 129 | 129 | 0.482 |
| 13 | 13 | 0.96 |
| 130 | 130 | 0.0847 |
| 131 | 131 | 0.883 |
| 132 | 132 | 0.268 |
| 133 | 133 | 0.522 |
| 134 | 134 | 0.067 |
| 135 | 135 | 0.648 |
| 136 | 136 | 0.138 |
| 137 | 137 | 0.044 |
| 138 | 138 | 0.153 |
| 139 | 139 | 0.86 |
| 14 | 14 | 0.508 |
| 140 | 140 | 0.03 |
| 141 | 141 | 0.0276 |
| 142 | 142 | 0.78 |
| 143 | 143 | 0.136 |
| 144 | 144 | 0.66 |
| 145 | 145 | 0.49 |
| 146 | 146 | 0.481 |
| 147 | 147 | 0.638 |
| 148 | 148 | 0.313 |
| 149 | 149 | 0.0493 |
| 15 | 15 | 0.131 |
| 150 | 150 | 0.893 |
| 151 | 151 | 0.784 |
| 152 | 152 | 0.0501 |
| 153 | 153 | 0.372 |
| 154 | 154 | 0.18 |
| 155 | 155 | 0.0481 |
| 156 | 156 | 0.217 |
| 157 | 157 | 0.98 |
| 158 | 158 | 0.0128 |
| 159 | 159 | 0.616 |
| 16 | 16 | 0.596 |
| 160 | 160 | 0.765 |
| 161 | 161 | 0.672 |
| 162 | 162 | 0.0315 |
| 163 | 163 | 0.176 |
| 164 | 164 | 0.935 |
| 165 | 165 | 0.526 |
| 166 | 166 | 0.998 |
| 167 | 167 | 0.0654 |
| 168 | 168 | 0.836 |
| 169 | 169 | 0.117 |
| 17 | 17 | 0.675 |
| 18 | 18 | 0.39 |
| 19 | 19 | 0.0807 |
| 2 | 2 | 0.159 |
| 20 | 20 | 0.383 |
| 21 | 21 | 0.337 |
| 22 | 22 | 0.335 |
| 23 | 23 | 0.565 |
| 24 | 24 | 0.363 |
| 25 | 25 | 0.193 |
| 26 | 26 | 0.611 |
| 27 | 27 | 0.553 |
| 28 | 28 | 0.0766 |
| 29 | 29 | 0.939 |
| 3 | 3 | 0.579 |
| 30 | 30 | 0.216 |
| 31 | 31 | 0.774 |
| 32 | 32 | 0.00808 |
| 33 | 33 | 0.829 |
| 34 | 34 | 0.541 |
| 35 | 35 | 0.519 |
| 36 | 36 | 0.163 |
| 37 | 37 | 0.31 |
| 38 | 38 | 0.269 |
| 39 | 39 | 0.111 |
| 4 | 4 | 0.595 |
| 40 | 40 | 0.343 |
| 41 | 41 | 0.011 |
| 42 | 42 | 0.518 |
| 43 | 43 | 0.512 |
| 44 | 44 | 0.745 |
| 45 | 45 | 0.793 |
| 46 | 46 | 0.823 |
| 47 | 47 | 0.659 |
| 48 | 48 | 0.761 |
| 49 | 49 | 0.314 |
| 5 | 5 | 0.231 |
| 50 | 50 | 0.375 |
| 51 | 51 | 0.708 |
| 52 | 52 | 0.667 |
| 53 | 53 | 0.364 |
| 54 | 54 | 0.91 |
| 55 | 55 | 0.225 |
| 56 | 56 | 0.717 |
| 57 | 57 | 0.404 |
| 58 | 58 | 0.132 |
| 59 | 59 | 0.249 |
| 6 | 6 | 0.812 |
| 60 | 60 | 0.332 |
| 61 | 61 | 0.811 |
| 62 | 62 | 0.233 |
| 63 | 63 | 0.946 |
| 64 | 64 | 0.914 |
| 65 | 65 | 0.696 |
| 66 | 66 | 0.554 |
| 67 | 67 | 0.835 |
| 68 | 68 | 0.428 |
| 69 | 69 | 0.903 |
| 7 | 7 | 0.348 |
| 70 | 70 | 0.92 |
| 71 | 71 | 0.141 |
| 72 | 72 | 0.555 |
| 73 | 73 | 0.0963 |
| 74 | 74 | 0.55 |
| 75 | 75 | 0.968 |
| 76 | 76 | 0.339 |
| 77 | 77 | 0.373 |
| 78 | 78 | 0.0338 |
| 79 | 79 | 0.00471 |
| 8 | 8 | 0.994 |
| 80 | 80 | 0.667 |
| 81 | 81 | 0.351 |
| 82 | 82 | 0.892 |
| 83 | 83 | 0.143 |
| 84 | 84 | 0.702 |
| 85 | 85 | 0.696 |
| 86 | 86 | 0.789 |
| 87 | 87 | 0.744 |
| 88 | 88 | 0.586 |
| 89 | 89 | 0.301 |
| 9 | 9 | 0.387 |
| 90 | 90 | 0.185 |
| 91 | 91 | 0.666 |
| 92 | 92 | 0.845 |
| 93 | 93 | 0.57 |
| 94 | 94 | 0.432 |
| 95 | 95 | 0.948 |
| 96 | 96 | 0.884 |
| 97 | 97 | 0.718 |
| 98 | 98 | 0.0937 |
| 99 | 99 | 0.00177 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11083
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0000188 (cell of skeletal muscle)
UBERON: Anatomy
0000468 (multi-cellular organism)
0001134 (skeletal muscle tissue)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0010317 (germ layer / neural crest derived structure)
0001015 (musculature)
0002204 (musculoskeletal system)
0000383 (musculature of body)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000162 (human skeletal muscle cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
