FF:11759-123H4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005850 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008564;DRR009436;DRZ000861;DRZ002246;DRZ012211;DRZ013596 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002118,UBERON:0003100,UBERON:0000474 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000275 | |||
|comment=Previously: mesenchymal precursor cell - ovarian cancer right ovary, donor2, tech rep1 | |comment=Previously: mesenchymal precursor cell - ovarian cancer right ovary, donor2, tech rep1 | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor2.CNhs12375.11759-123H4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor2.CNhs12375.11759-123H4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor2.CNhs12375.11759-123H4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor2.CNhs12375.11759-123H4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor2.CNhs12375.11759-123H4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11759-123H4 | |id=FF:11759-123H4 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000275 | ||
|is_obsolete= | |||
|library_id=CNhs12375 | |||
|library_id_phase_based=2:CNhs12375 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11759 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11759 | |||
|name=mesenchymal precursor cell - ovarian cancer right ovary, donor2 | |name=mesenchymal precursor cell - ovarian cancer right ovary, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12375,LSID914,release011,COMPLETED | |profile_hcage=CNhs12375,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=29.0224 | |rna_weight_ug=29.0224 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.79249768857529e-217!GO:0005737;cytoplasm;6.85429663258919e-195!GO:0043226;organelle;1.61015854306533e-167!GO:0043229;intracellular organelle;3.7363038721926e-167!GO:0043231;intracellular membrane-bound organelle;5.6011334148024e-164!GO:0043227;membrane-bound organelle;9.61941439982652e-164!GO:0044444;cytoplasmic part;4.67903309067131e-143!GO:0044422;organelle part;4.35494584036037e-130!GO:0044446;intracellular organelle part;1.59844901291181e-128!GO:0032991;macromolecular complex;2.6865761212647e-89!GO:0005515;protein binding;2.55355905561134e-81!GO:0030529;ribonucleoprotein complex;1.08871917128491e-75!GO:0044238;primary metabolic process;1.58540917435525e-74!GO:0044237;cellular metabolic process;4.80883012809894e-74!GO:0043170;macromolecule metabolic process;3.4058305415629e-68!GO:0043233;organelle lumen;1.8030340159668e-63!GO:0031974;membrane-enclosed lumen;1.8030340159668e-63!GO:0005739;mitochondrion;3.24434360869793e-60!GO:0044428;nuclear part;1.1291568755769e-58!GO:0003723;RNA binding;1.90825805834986e-58!GO:0031090;organelle membrane;2.27843972400486e-53!GO:0005634;nucleus;1.49755127925924e-52!GO:0019538;protein metabolic process;7.53998656048429e-51!GO:0005840;ribosome;1.25334868630821e-46!GO:0016043;cellular component organization and biogenesis;7.40676134053246e-46!GO:0044260;cellular macromolecule metabolic process;1.48993417508811e-45!GO:0043234;protein complex;1.77711323639997e-45!GO:0044267;cellular protein metabolic process;2.08297193547742e-45!GO:0015031;protein transport;4.32116445125245e-45!GO:0006412;translation;1.88280267787193e-44!GO:0033036;macromolecule localization;2.00711200820489e-44!GO:0044429;mitochondrial part;9.67029014228939e-42!GO:0045184;establishment of protein localization;1.48879743943794e-41!GO:0008104;protein localization;1.66949991425006e-41!GO:0003735;structural constituent of ribosome;2.2135290194641e-41!GO:0005829;cytosol;2.95695098052089e-41!GO:0006396;RNA processing;2.52174119887852e-40!GO:0009058;biosynthetic process;1.32036273172122e-38!GO:0031967;organelle envelope;3.26219614122925e-37!GO:0031975;envelope;5.75288711240446e-37!GO:0009059;macromolecule biosynthetic process;1.19060622611513e-36!GO:0031981;nuclear lumen;1.68388598382022e-36!GO:0033279;ribosomal subunit;4.86505205910243e-36!GO:0046907;intracellular transport;1.43139509812321e-35!GO:0043283;biopolymer metabolic process;3.66343915012165e-34!GO:0044249;cellular biosynthetic process;4.29891319516751e-34!GO:0016071;mRNA metabolic process;9.46587424161167e-33!GO:0008380;RNA splicing;1.19841828176767e-31!GO:0010467;gene expression;8.80702632814682e-30!GO:0006397;mRNA processing;5.58727675197737e-29!GO:0006996;organelle organization and biogenesis;1.45160673301795e-28!GO:0005740;mitochondrial envelope;2.72375178504222e-28!GO:0006886;intracellular protein transport;4.43064353745839e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.11706790367308e-26!GO:0031966;mitochondrial membrane;1.21811709884309e-26!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.03148957317947e-26!GO:0043228;non-membrane-bound organelle;6.80877604264595e-26!GO:0043232;intracellular non-membrane-bound organelle;6.80877604264595e-26!GO:0019866;organelle inner membrane;2.03606441200582e-25!GO:0065003;macromolecular complex assembly;4.58478869034522e-25!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.84675974537143e-25!GO:0005783;endoplasmic reticulum;8.19135099618484e-24!GO:0005743;mitochondrial inner membrane;9.40421246641535e-24!GO:0006119;oxidative phosphorylation;5.82106669822269e-23!GO:0005654;nucleoplasm;6.23330328743221e-23!GO:0051641;cellular localization;6.9494976029152e-23!GO:0051649;establishment of cellular localization;7.00741728489548e-23!GO:0022607;cellular component assembly;8.41380149195233e-23!GO:0012505;endomembrane system;8.59359630198417e-23!GO:0044445;cytosolic part;2.11555389382716e-22!GO:0005681;spliceosome;7.17625589103407e-22!GO:0044455;mitochondrial membrane part;5.73594531863225e-21!GO:0016462;pyrophosphatase activity;1.34666000864997e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.5627271158594e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;2.55189535170868e-20!GO:0006457;protein folding;4.34364632063378e-20!GO:0017111;nucleoside-triphosphatase activity;5.96422832942319e-20!GO:0000166;nucleotide binding;6.32766035731793e-20!GO:0015934;large ribosomal subunit;2.30586082537931e-19!GO:0048770;pigment granule;2.58988670140511e-19!GO:0042470;melanosome;2.58988670140511e-19!GO:0005794;Golgi apparatus;4.55152788062848e-19!GO:0044432;endoplasmic reticulum part;5.33412586953537e-19!GO:0044451;nucleoplasm part;5.48594906485996e-19!GO:0006259;DNA metabolic process;6.03178276503936e-18!GO:0015935;small ribosomal subunit;1.14181960873364e-17!GO:0008134;transcription factor binding;1.1491159735572e-17!GO:0005746;mitochondrial respiratory chain;2.67750339279098e-17!GO:0000502;proteasome complex (sensu Eukaryota);6.23337145197317e-17!GO:0043285;biopolymer catabolic process;8.18057024265732e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.2071099918157e-16!GO:0009057;macromolecule catabolic process;2.50438719147522e-16!GO:0044265;cellular macromolecule catabolic process;2.82562397206934e-16!GO:0007049;cell cycle;4.32645436824803e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;4.43522881392767e-16!GO:0031980;mitochondrial lumen;5.46023284988681e-16!GO:0005759;mitochondrial matrix;5.46023284988681e-16!GO:0030163;protein catabolic process;5.84865327493889e-16!GO:0006512;ubiquitin cycle;6.05632040599191e-16!GO:0019941;modification-dependent protein catabolic process;7.59825212669651e-16!GO:0043632;modification-dependent macromolecule catabolic process;7.59825212669651e-16!GO:0051186;cofactor metabolic process;8.18975465429782e-16!GO:0044257;cellular protein catabolic process;9.56485973554628e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.27945462412782e-15!GO:0022618;protein-RNA complex assembly;1.49041895210292e-15!GO:0048193;Golgi vesicle transport;1.9252269106703e-15!GO:0050136;NADH dehydrogenase (quinone) activity;2.52824189499758e-15!GO:0003954;NADH dehydrogenase activity;2.52824189499758e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.52824189499758e-15!GO:0016874;ligase activity;6.17440718656629e-15!GO:0032553;ribonucleotide binding;1.66783109003968e-14!GO:0032555;purine ribonucleotide binding;1.66783109003968e-14!GO:0006605;protein targeting;1.93406994603676e-14!GO:0017076;purine nucleotide binding;2.03118715124607e-14!GO:0016192;vesicle-mediated transport;2.88341724528605e-14!GO:0044248;cellular catabolic process;2.89896491001102e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.572642541995e-14!GO:0051082;unfolded protein binding;7.60585680883609e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.61676703866391e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.63085683019404e-13!GO:0008135;translation factor activity, nucleic acid binding;1.83680567527373e-13!GO:0005793;ER-Golgi intermediate compartment;2.303680724182e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.30632130663014e-13!GO:0042773;ATP synthesis coupled electron transport;2.30632130663014e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.30632130663014e-13!GO:0045271;respiratory chain complex I;2.30632130663014e-13!GO:0005747;mitochondrial respiratory chain complex I;2.30632130663014e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.70624273335745e-13!GO:0043412;biopolymer modification;2.92655803973792e-13!GO:0005730;nucleolus;3.94444780607032e-13!GO:0005789;endoplasmic reticulum membrane;5.96942226228719e-13!GO:0005761;mitochondrial ribosome;7.11750270767128e-13!GO:0000313;organellar ribosome;7.11750270767128e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.23812901705645e-13!GO:0048523;negative regulation of cellular process;7.82537747364916e-13!GO:0012501;programmed cell death;9.39381250046791e-13!GO:0003676;nucleic acid binding;1.02674907362473e-12!GO:0006732;coenzyme metabolic process;1.13008223708903e-12!GO:0006915;apoptosis;2.14526373464392e-12!GO:0006464;protein modification process;3.82501536072543e-12!GO:0022402;cell cycle process;5.07421396066342e-12!GO:0003712;transcription cofactor activity;7.96889160234798e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.16801095684525e-11!GO:0000375;RNA splicing, via transesterification reactions;1.16801095684525e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.16801095684525e-11!GO:0009055;electron carrier activity;1.81788156221998e-11!GO:0008219;cell death;4.10119137315057e-11!GO:0016265;death;4.10119137315057e-11!GO:0048519;negative regulation of biological process;4.94939793786021e-11!GO:0009259;ribonucleotide metabolic process;5.64822735784121e-11!GO:0003743;translation initiation factor activity;6.70724090263351e-11!GO:0006163;purine nucleotide metabolic process;9.90000267397625e-11!GO:0005524;ATP binding;1.02421234737247e-10!GO:0016070;RNA metabolic process;1.42427017216548e-10!GO:0009150;purine ribonucleotide metabolic process;2.0084586087514e-10!GO:0032559;adenyl ribonucleotide binding;2.34271497729073e-10!GO:0042254;ribosome biogenesis and assembly;2.50267878630148e-10!GO:0003924;GTPase activity;3.36325332394616e-10!GO:0030554;adenyl nucleotide binding;3.55240685153913e-10!GO:0016604;nuclear body;3.58341291576438e-10!GO:0006164;purine nucleotide biosynthetic process;5.34868775179111e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.83968528460753e-10!GO:0005635;nuclear envelope;6.39328563253746e-10!GO:0006974;response to DNA damage stimulus;8.2113304491228e-10!GO:0006413;translational initiation;8.6536029364319e-10!GO:0043687;post-translational protein modification;8.79482963502172e-10!GO:0009152;purine ribonucleotide biosynthetic process;1.05510131759446e-09!GO:0000278;mitotic cell cycle;1.06355558040839e-09!GO:0009260;ribonucleotide biosynthetic process;1.23715186882886e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.23715186882886e-09!GO:0031965;nuclear membrane;1.4130722197952e-09!GO:0005768;endosome;1.79117861020498e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.12856296503462e-09!GO:0000074;regulation of progression through cell cycle;2.42599614203509e-09!GO:0009141;nucleoside triphosphate metabolic process;2.46327556539866e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.46327556539866e-09!GO:0009144;purine nucleoside triphosphate metabolic process;2.46327556539866e-09!GO:0008639;small protein conjugating enzyme activity;2.69465504509123e-09!GO:0051726;regulation of cell cycle;2.75874259539523e-09!GO:0009056;catabolic process;3.27013122145139e-09!GO:0019787;small conjugating protein ligase activity;3.75381002770517e-09!GO:0006913;nucleocytoplasmic transport;3.89786144951859e-09!GO:0016887;ATPase activity;4.2301098470555e-09!GO:0004842;ubiquitin-protein ligase activity;4.58302197391292e-09!GO:0042623;ATPase activity, coupled;6.60959650092438e-09!GO:0006446;regulation of translational initiation;6.82101919810008e-09!GO:0015986;ATP synthesis coupled proton transport;7.1643861688295e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.1643861688295e-09!GO:0051169;nuclear transport;7.16549606506656e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.53933153817372e-09!GO:0006888;ER to Golgi vesicle-mediated transport;9.73059774103124e-09!GO:0009142;nucleoside triphosphate biosynthetic process;1.13821383451522e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.13821383451522e-08!GO:0044453;nuclear membrane part;1.20204219754804e-08!GO:0043069;negative regulation of programmed cell death;1.25384449446811e-08!GO:0046034;ATP metabolic process;1.31241580852769e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.32571943193104e-08!GO:0009060;aerobic respiration;1.32571943193104e-08!GO:0044431;Golgi apparatus part;1.39013621913622e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.58442050025521e-08!GO:0005788;endoplasmic reticulum lumen;1.58460189816374e-08!GO:0019829;cation-transporting ATPase activity;1.58915776065571e-08!GO:0008565;protein transporter activity;1.7603304874035e-08!GO:0006366;transcription from RNA polymerase II promoter;2.13754776433476e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.23171692123207e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.23171692123207e-08!GO:0016607;nuclear speck;2.78695812953599e-08!GO:0043067;regulation of programmed cell death;2.93949707029627e-08!GO:0043066;negative regulation of apoptosis;3.40594113976313e-08!GO:0016881;acid-amino acid ligase activity;3.66765363296635e-08!GO:0045333;cellular respiration;4.0438679966265e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.40570494498005e-08!GO:0042981;regulation of apoptosis;4.4345745777576e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.55883894331543e-08!GO:0006916;anti-apoptosis;4.9086185273115e-08!GO:0016491;oxidoreductase activity;5.45297211911085e-08!GO:0051246;regulation of protein metabolic process;6.12992403944912e-08!GO:0051188;cofactor biosynthetic process;6.50709416335929e-08!GO:0030120;vesicle coat;6.50709416335929e-08!GO:0030662;coated vesicle membrane;6.50709416335929e-08!GO:0006281;DNA repair;8.72830049087368e-08!GO:0031252;leading edge;9.70212595135143e-08!GO:0015078;hydrogen ion transmembrane transporter activity;9.73954087223377e-08!GO:0017038;protein import;1.02359860445244e-07!GO:0006754;ATP biosynthetic process;1.03058721473445e-07!GO:0006753;nucleoside phosphate metabolic process;1.03058721473445e-07!GO:0006399;tRNA metabolic process;1.17567328247855e-07!GO:0050794;regulation of cellular process;1.29603702867782e-07!GO:0051276;chromosome organization and biogenesis;1.3499507548269e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;1.7103173443145e-07!GO:0003714;transcription corepressor activity;1.96223537977472e-07!GO:0004386;helicase activity;2.37821219268348e-07!GO:0009117;nucleotide metabolic process;2.4104838368973e-07!GO:0030532;small nuclear ribonucleoprotein complex;2.42785936370954e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.60808964942676e-07!GO:0005525;GTP binding;2.79440075556568e-07!GO:0007005;mitochondrion organization and biogenesis;3.0690560711006e-07!GO:0005773;vacuole;3.45417618140974e-07!GO:0006099;tricarboxylic acid cycle;3.50729549882526e-07!GO:0046356;acetyl-CoA catabolic process;3.50729549882526e-07!GO:0016564;transcription repressor activity;3.61279182172569e-07!GO:0009719;response to endogenous stimulus;3.9714634196504e-07!GO:0006461;protein complex assembly;4.0452143563764e-07!GO:0006323;DNA packaging;4.62501121456907e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.17417204579765e-07!GO:0004812;aminoacyl-tRNA ligase activity;5.17417204579765e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.17417204579765e-07!GO:0008026;ATP-dependent helicase activity;5.37895266903623e-07!GO:0005694;chromosome;5.45928434034732e-07!GO:0043038;amino acid activation;6.97505991619307e-07!GO:0006418;tRNA aminoacylation for protein translation;6.97505991619307e-07!GO:0043039;tRNA aminoacylation;6.97505991619307e-07!GO:0044440;endosomal part;7.0058745455865e-07!GO:0010008;endosome membrane;7.0058745455865e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.96577141850272e-07!GO:0031324;negative regulation of cellular metabolic process;8.05857230167983e-07!GO:0005770;late endosome;8.25707068890985e-07!GO:0051301;cell division;8.7569042214101e-07!GO:0000139;Golgi membrane;8.94740485331078e-07!GO:0016787;hydrolase activity;9.23347905498178e-07!GO:0015630;microtubule cytoskeleton;1.00864411156993e-06!GO:0051187;cofactor catabolic process;1.04002540275295e-06!GO:0048475;coated membrane;1.1463484008043e-06!GO:0030117;membrane coat;1.1463484008043e-06!GO:0000087;M phase of mitotic cell cycle;1.20603039234147e-06!GO:0065002;intracellular protein transport across a membrane;1.31228319664442e-06!GO:0031988;membrane-bound vesicle;1.31377007196136e-06!GO:0009108;coenzyme biosynthetic process;1.32722453536312e-06!GO:0007067;mitosis;1.50320528464764e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.50320528464764e-06!GO:0006084;acetyl-CoA metabolic process;1.5636944155554e-06!GO:0004298;threonine endopeptidase activity;1.56972448137819e-06!GO:0006364;rRNA processing;1.76036653554451e-06!GO:0009109;coenzyme catabolic process;1.80420989333093e-06!GO:0005643;nuclear pore;1.9378868955322e-06!GO:0044427;chromosomal part;2.31426171185483e-06!GO:0032446;protein modification by small protein conjugation;2.48129744766287e-06!GO:0006260;DNA replication;2.91975699669908e-06!GO:0032561;guanyl ribonucleotide binding;3.24536577232588e-06!GO:0019001;guanyl nucleotide binding;3.24536577232588e-06!GO:0031982;vesicle;3.24536577232588e-06!GO:0016072;rRNA metabolic process;3.24656981870695e-06!GO:0005798;Golgi-associated vesicle;3.34553091894074e-06!GO:0065004;protein-DNA complex assembly;3.85931400747716e-06!GO:0031410;cytoplasmic vesicle;4.04872963680459e-06!GO:0045259;proton-transporting ATP synthase complex;4.11119148811718e-06!GO:0006752;group transfer coenzyme metabolic process;4.32280937260567e-06!GO:0016567;protein ubiquitination;4.54429124397172e-06!GO:0000323;lytic vacuole;4.98739190775297e-06!GO:0005764;lysosome;4.98739190775297e-06!GO:0045786;negative regulation of progression through cell cycle;5.46962904402308e-06!GO:0007243;protein kinase cascade;6.39988066360181e-06!GO:0006613;cotranslational protein targeting to membrane;7.05485479399255e-06!GO:0009892;negative regulation of metabolic process;7.37286848211916e-06!GO:0022403;cell cycle phase;7.43001687051617e-06!GO:0006793;phosphorus metabolic process;7.54937041396405e-06!GO:0006796;phosphate metabolic process;7.54937041396405e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.11818504697548e-06!GO:0006091;generation of precursor metabolites and energy;9.33116506622247e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.00222113540751e-05!GO:0016853;isomerase activity;1.01594340096109e-05!GO:0000245;spliceosome assembly;1.19931234555593e-05!GO:0005667;transcription factor complex;1.28211503925428e-05!GO:0006403;RNA localization;1.28882832164499e-05!GO:0045454;cell redox homeostasis;1.37023078529844e-05!GO:0043566;structure-specific DNA binding;1.37281405600425e-05!GO:0003697;single-stranded DNA binding;1.39874950487014e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.4497557763586e-05!GO:0006333;chromatin assembly or disassembly;1.50278071554829e-05!GO:0050657;nucleic acid transport;1.62566420727027e-05!GO:0051236;establishment of RNA localization;1.62566420727027e-05!GO:0050658;RNA transport;1.62566420727027e-05!GO:0051170;nuclear import;1.65662131661622e-05!GO:0046930;pore complex;1.70406130633807e-05!GO:0008654;phospholipid biosynthetic process;1.82173272189243e-05!GO:0000151;ubiquitin ligase complex;2.11812207127629e-05!GO:0050789;regulation of biological process;2.26260228821058e-05!GO:0016740;transferase activity;2.32269268605597e-05!GO:0005769;early endosome;2.37727555014305e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.44648594738278e-05!GO:0016310;phosphorylation;2.45647671563945e-05!GO:0005813;centrosome;2.82044581156766e-05!GO:0006606;protein import into nucleus;2.827070274572e-05!GO:0048522;positive regulation of cellular process;2.89710151384987e-05!GO:0005762;mitochondrial large ribosomal subunit;3.15293313008076e-05!GO:0000315;organellar large ribosomal subunit;3.15293313008076e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.35490997826394e-05!GO:0016859;cis-trans isomerase activity;3.51988674047546e-05!GO:0016568;chromatin modification;3.55885049684772e-05!GO:0030867;rough endoplasmic reticulum membrane;3.58672440633503e-05!GO:0031968;organelle outer membrane;3.80919003862646e-05!GO:0030133;transport vesicle;3.87796810070987e-05!GO:0007010;cytoskeleton organization and biogenesis;3.90845056575666e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.67961305990458e-05!GO:0051789;response to protein stimulus;4.77309509319106e-05!GO:0006986;response to unfolded protein;4.77309509319106e-05!GO:0033116;ER-Golgi intermediate compartment membrane;5.29124264345808e-05!GO:0003713;transcription coactivator activity;5.36097091405002e-05!GO:0019867;outer membrane;5.93804582498131e-05!GO:0016779;nucleotidyltransferase activity;6.21575128342206e-05!GO:0003724;RNA helicase activity;6.38138689576886e-05!GO:0000785;chromatin;6.79832466438885e-05!GO:0016563;transcription activator activity;7.19467203191568e-05!GO:0008361;regulation of cell size;7.48196540186671e-05!GO:0005815;microtubule organizing center;7.88722847087955e-05!GO:0016481;negative regulation of transcription;8.30904311787476e-05!GO:0030029;actin filament-based process;9.38373172153192e-05!GO:0005048;signal sequence binding;9.55214220202646e-05!GO:0016049;cell growth;0.00012098906465656!GO:0006612;protein targeting to membrane;0.000144704058880514!GO:0005741;mitochondrial outer membrane;0.000153349570538672!GO:0043021;ribonucleoprotein binding;0.000154390151884898!GO:0008092;cytoskeletal protein binding;0.000199209049183649!GO:0043623;cellular protein complex assembly;0.000211652482229505!GO:0000279;M phase;0.000214341675728613!GO:0004576;oligosaccharyl transferase activity;0.000220347427533441!GO:0001558;regulation of cell growth;0.000230616158381691!GO:0006334;nucleosome assembly;0.000234190211300788!GO:0015980;energy derivation by oxidation of organic compounds;0.000261868436393461!GO:0051427;hormone receptor binding;0.000263170638885955!GO:0005885;Arp2/3 protein complex;0.000269313413770742!GO:0009165;nucleotide biosynthetic process;0.000276648497908411!GO:0051028;mRNA transport;0.00028197903878931!GO:0008250;oligosaccharyl transferase complex;0.000283832445543475!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000292717090444896!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000303088932460773!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000304313861452989!GO:0005905;coated pit;0.000312205707979491!GO:0005791;rough endoplasmic reticulum;0.000327530343832167!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000338185137160081!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000413075658014563!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000534087804988161!GO:0035257;nuclear hormone receptor binding;0.000536908797929838!GO:0030663;COPI coated vesicle membrane;0.000538591433886775!GO:0030126;COPI vesicle coat;0.000538591433886775!GO:0019899;enzyme binding;0.000570054927921168!GO:0018196;peptidyl-asparagine modification;0.000570705610518675!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000570705610518675!GO:0000314;organellar small ribosomal subunit;0.000586295950701618!GO:0005763;mitochondrial small ribosomal subunit;0.000586295950701618!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000591336371847861!GO:0031497;chromatin assembly;0.000596170989064429!GO:0007264;small GTPase mediated signal transduction;0.000643414621403802!GO:0006950;response to stress;0.000643414621403802!GO:0044262;cellular carbohydrate metabolic process;0.000700908450907351!GO:0042802;identical protein binding;0.000757103748966684!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000765624224247685!GO:0016044;membrane organization and biogenesis;0.000780122644400667!GO:0016363;nuclear matrix;0.000851850000312382!GO:0051920;peroxiredoxin activity;0.000907756618293188!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000907756618293188!GO:0006839;mitochondrial transport;0.000946141654976843!GO:0006891;intra-Golgi vesicle-mediated transport;0.00104542773422499!GO:0001726;ruffle;0.00104542773422499!GO:0065009;regulation of a molecular function;0.00111144087745672!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00112570122356894!GO:0046474;glycerophospholipid biosynthetic process;0.00116773676813044!GO:0003729;mRNA binding;0.00118117548471402!GO:0003899;DNA-directed RNA polymerase activity;0.00126738881803498!GO:0008186;RNA-dependent ATPase activity;0.00128705884368895!GO:0019843;rRNA binding;0.00129309465237661!GO:0008047;enzyme activator activity;0.00136913057715928!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00136913057715928!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00136913057715928!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00136913057715928!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00146350089875462!GO:0043681;protein import into mitochondrion;0.00154140691454896!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00176026107321525!GO:0015399;primary active transmembrane transporter activity;0.00176026107321525!GO:0030137;COPI-coated vesicle;0.00178201822264211!GO:0016197;endosome transport;0.00178387836039396!GO:0051329;interphase of mitotic cell cycle;0.00181645506739661!GO:0006626;protein targeting to mitochondrion;0.00187231221759065!GO:0065007;biological regulation;0.00188476132783923!GO:0048500;signal recognition particle;0.00189969393924638!GO:0006818;hydrogen transport;0.00192863415869666!GO:0030027;lamellipodium;0.00197559295392506!GO:0006414;translational elongation;0.00203229182816329!GO:0030176;integral to endoplasmic reticulum membrane;0.00204543205141552!GO:0022890;inorganic cation transmembrane transporter activity;0.00204853367415402!GO:0005819;spindle;0.00236849835179877!GO:0009967;positive regulation of signal transduction;0.00247114380048571!GO:0015992;proton transport;0.00248238941515682!GO:0048518;positive regulation of biological process;0.00295439721086157!GO:0008610;lipid biosynthetic process;0.00307213498957458!GO:0007050;cell cycle arrest;0.00326809621580843!GO:0030658;transport vesicle membrane;0.00327239599253086!GO:0031072;heat shock protein binding;0.00328855345989569!GO:0016126;sterol biosynthetic process;0.0033181076432352!GO:0046467;membrane lipid biosynthetic process;0.0033727543612742!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00338997069134123!GO:0004004;ATP-dependent RNA helicase activity;0.00338997069134123!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00344443868839371!GO:0046489;phosphoinositide biosynthetic process;0.00348840752243836!GO:0006979;response to oxidative stress;0.00349435651525654!GO:0006892;post-Golgi vesicle-mediated transport;0.00355968113926403!GO:0006740;NADPH regeneration;0.00367825970797008!GO:0006098;pentose-phosphate shunt;0.00367825970797008!GO:0003690;double-stranded DNA binding;0.00397890378281638!GO:0051168;nuclear export;0.00422875566730117!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00425481145850692!GO:0045047;protein targeting to ER;0.00425481145850692!GO:0007006;mitochondrial membrane organization and biogenesis;0.00428623755241461!GO:0051252;regulation of RNA metabolic process;0.0044828960856694!GO:0015631;tubulin binding;0.0044828960856694!GO:0008139;nuclear localization sequence binding;0.00480947479091682!GO:0045045;secretory pathway;0.00497601393164574!GO:0043284;biopolymer biosynthetic process;0.00509432366229148!GO:0030659;cytoplasmic vesicle membrane;0.00509560707086678!GO:0030134;ER to Golgi transport vesicle;0.00517492884981938!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00533779748936045!GO:0008632;apoptotic program;0.00550921992373657!GO:0030132;clathrin coat of coated pit;0.00554609820912223!GO:0008180;signalosome;0.00556740739570671!GO:0051325;interphase;0.00556740739570671!GO:0030127;COPII vesicle coat;0.00556740739570671!GO:0012507;ER to Golgi transport vesicle membrane;0.00556740739570671!GO:0008243;plasminogen activator activity;0.00559471204124949!GO:0006383;transcription from RNA polymerase III promoter;0.00561973657413647!GO:0031901;early endosome membrane;0.00576587850454134!GO:0035258;steroid hormone receptor binding;0.00596278577870846!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00605151491405918!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00605151491405918!GO:0048471;perinuclear region of cytoplasm;0.00622079457834428!GO:0005684;U2-dependent spliceosome;0.00630915962749646!GO:0008312;7S RNA binding;0.00667334999794103!GO:0048468;cell development;0.00676519329549934!GO:0006007;glucose catabolic process;0.00681176953284364!GO:0048487;beta-tubulin binding;0.00703230560439515!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00719884789861186!GO:0030880;RNA polymerase complex;0.00728037591779069!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00732817878719526!GO:0015002;heme-copper terminal oxidase activity;0.00732817878719526!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00732817878719526!GO:0004129;cytochrome-c oxidase activity;0.00732817878719526!GO:0005869;dynactin complex;0.00734806349228295!GO:0031418;L-ascorbic acid binding;0.00742794958197902!GO:0006261;DNA-dependent DNA replication;0.00742940303923525!GO:0000059;protein import into nucleus, docking;0.00755472187869222!GO:0003779;actin binding;0.00756402368105571!GO:0031902;late endosome membrane;0.00758636133247407!GO:0046519;sphingoid metabolic process;0.00780276309016691!GO:0006509;membrane protein ectodomain proteolysis;0.00789208451811356!GO:0033619;membrane protein proteolysis;0.00789208451811356!GO:0030521;androgen receptor signaling pathway;0.00804089762819264!GO:0005874;microtubule;0.00811457004326778!GO:0017166;vinculin binding;0.0083671026524104!GO:0005096;GTPase activator activity;0.00864481582154094!GO:0006650;glycerophospholipid metabolic process;0.00874478588267609!GO:0007051;spindle organization and biogenesis;0.00878072161369742!GO:0030660;Golgi-associated vesicle membrane;0.00885280789883341!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00885280789883341!GO:0040008;regulation of growth;0.00937825142864111!GO:0000075;cell cycle checkpoint;0.00944683806184899!GO:0046483;heterocycle metabolic process;0.00949768306759669!GO:0005581;collagen;0.00978609442644538!GO:0005862;muscle thin filament tropomyosin;0.00978609442644538!GO:0043492;ATPase activity, coupled to movement of substances;0.00978609442644538!GO:0006672;ceramide metabolic process;0.010103923729701!GO:0003711;transcription elongation regulator activity;0.0103679472978769!GO:0004177;aminopeptidase activity;0.0104424606401079!GO:0016272;prefoldin complex;0.0104945163842229!GO:0044433;cytoplasmic vesicle part;0.0110558294144896!GO:0003684;damaged DNA binding;0.0113989714961931!GO:0030518;steroid hormone receptor signaling pathway;0.0113989714961931!GO:0031543;peptidyl-proline dioxygenase activity;0.0114277905721674!GO:0051087;chaperone binding;0.0114277905721674!GO:0045892;negative regulation of transcription, DNA-dependent;0.0116653254822974!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0116897819199261!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0117499043388833!GO:0030041;actin filament polymerization;0.0117986650665532!GO:0043488;regulation of mRNA stability;0.0119102386901509!GO:0043487;regulation of RNA stability;0.0119102386901509!GO:0030118;clathrin coat;0.0119102386901509!GO:0048144;fibroblast proliferation;0.0119656751791806!GO:0048145;regulation of fibroblast proliferation;0.0119656751791806!GO:0005774;vacuolar membrane;0.0119836802514586!GO:0043022;ribosome binding;0.0131878218579733!GO:0006695;cholesterol biosynthetic process;0.0133420628566188!GO:0007030;Golgi organization and biogenesis;0.0133420628566188!GO:0008234;cysteine-type peptidase activity;0.0137068752688584!GO:0007033;vacuole organization and biogenesis;0.0137444460157083!GO:0007040;lysosome organization and biogenesis;0.013902089662098!GO:0006302;double-strand break repair;0.0139359141065176!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0142277944552309!GO:0000428;DNA-directed RNA polymerase complex;0.0142277944552309!GO:0050790;regulation of catalytic activity;0.0142374510805726!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0142756084440006!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0145755804853457!GO:0007242;intracellular signaling cascade;0.0146028763578603!GO:0000339;RNA cap binding;0.0147256334889433!GO:0003678;DNA helicase activity;0.0148145024274854!GO:0006497;protein amino acid lipidation;0.014951577958065!GO:0005637;nuclear inner membrane;0.0150826361087459!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0159004352776378!GO:0006739;NADP metabolic process;0.0160542332028083!GO:0007034;vacuolar transport;0.0161339087963008!GO:0048146;positive regulation of fibroblast proliferation;0.0163363743849299!GO:0051287;NAD binding;0.0163380342095833!GO:0012506;vesicle membrane;0.0167739304957827!GO:0005832;chaperonin-containing T-complex;0.0169819171636021!GO:0031529;ruffle organization and biogenesis;0.0169885131371735!GO:0000776;kinetochore;0.0170474713234903!GO:0006595;polyamine metabolic process;0.0174317963552161!GO:0000096;sulfur amino acid metabolic process;0.0174317963552161!GO:0006118;electron transport;0.0174401304113777!GO:0033673;negative regulation of kinase activity;0.0174401304113777!GO:0006469;negative regulation of protein kinase activity;0.0174401304113777!GO:0019222;regulation of metabolic process;0.017582725773475!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.017643481090914!GO:0006402;mRNA catabolic process;0.017643481090914!GO:0022406;membrane docking;0.017798187918244!GO:0048278;vesicle docking;0.017798187918244!GO:0003746;translation elongation factor activity;0.0178880514264425!GO:0031625;ubiquitin protein ligase binding;0.0182492993596749!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0183793609966888!GO:0045792;negative regulation of cell size;0.0184021476540081!GO:0050681;androgen receptor binding;0.019042906071824!GO:0031301;integral to organelle membrane;0.0194384056161398!GO:0051348;negative regulation of transferase activity;0.0196657546474915!GO:0008094;DNA-dependent ATPase activity;0.0200870248105113!GO:0030032;lamellipodium biogenesis;0.0202954379226184!GO:0030308;negative regulation of cell growth;0.0206556395181434!GO:0050662;coenzyme binding;0.0206593127040935!GO:0019798;procollagen-proline dioxygenase activity;0.0214444872565121!GO:0008022;protein C-terminus binding;0.021553341407266!GO:0008033;tRNA processing;0.0215582895532967!GO:0000082;G1/S transition of mitotic cell cycle;0.0216486776136523!GO:0043433;negative regulation of transcription factor activity;0.0220224656932399!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0220356281894743!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0220356281894743!GO:0030833;regulation of actin filament polymerization;0.0222781335610198!GO:0008154;actin polymerization and/or depolymerization;0.0226014415061075!GO:0004674;protein serine/threonine kinase activity;0.0228595913649737!GO:0006352;transcription initiation;0.0228595913649737!GO:0031124;mRNA 3'-end processing;0.0230544898582557!GO:0006289;nucleotide-excision repair;0.0232193320066915!GO:0030125;clathrin vesicle coat;0.0233775153742617!GO:0030665;clathrin coated vesicle membrane;0.0233775153742617!GO:0051128;regulation of cellular component organization and biogenesis;0.0234072815042599!GO:0003756;protein disulfide isomerase activity;0.0236934372083423!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0236934372083423!GO:0032984;macromolecular complex disassembly;0.0237738219343782!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0240995827124773!GO:0050811;GABA receptor binding;0.0241570687124824!GO:0005801;cis-Golgi network;0.0241900240242568!GO:0051540;metal cluster binding;0.0246599701721743!GO:0051536;iron-sulfur cluster binding;0.0246599701721743!GO:0006904;vesicle docking during exocytosis;0.024811094993836!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0249302393809563!GO:0051052;regulation of DNA metabolic process;0.0252926534136036!GO:0044452;nucleolar part;0.0254065608751502!GO:0030384;phosphoinositide metabolic process;0.0258593039780924!GO:0044437;vacuolar part;0.0265394955652818!GO:0045941;positive regulation of transcription;0.0269325953309158!GO:0006354;RNA elongation;0.0269865856512945!GO:0000118;histone deacetylase complex;0.0273596117647531!GO:0016408;C-acyltransferase activity;0.0277558330256594!GO:0030433;ER-associated protein catabolic process;0.0282915717806179!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0282915717806179!GO:0019752;carboxylic acid metabolic process;0.0287280976431195!GO:0035035;histone acetyltransferase binding;0.0291151648591731!GO:0045893;positive regulation of transcription, DNA-dependent;0.0291990266731818!GO:0000049;tRNA binding;0.0300379642407909!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0306437099359321!GO:0000209;protein polyubiquitination;0.0311590550046721!GO:0032940;secretion by cell;0.0314254920496096!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0317770664083127!GO:0006082;organic acid metabolic process;0.0319899411719073!GO:0006506;GPI anchor biosynthetic process;0.0322068405534125!GO:0006643;membrane lipid metabolic process;0.0325460116349424!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0325460116349424!GO:0006769;nicotinamide metabolic process;0.0326827032212328!GO:0046426;negative regulation of JAK-STAT cascade;0.0332868791906756!GO:0006417;regulation of translation;0.0332868791906756!GO:0016251;general RNA polymerase II transcription factor activity;0.0335130074098777!GO:0030503;regulation of cell redox homeostasis;0.0337989146448615!GO:0006607;NLS-bearing substrate import into nucleus;0.0345636894597114!GO:0031371;ubiquitin conjugating enzyme complex;0.0347273856767041!GO:0006401;RNA catabolic process;0.0348169182362829!GO:0030508;thiol-disulfide exchange intermediate activity;0.034979595927425!GO:0051270;regulation of cell motility;0.0353578044752799!GO:0051539;4 iron, 4 sulfur cluster binding;0.035709995856541!GO:0005765;lysosomal membrane;0.0366473275884439!GO:0005586;collagen type III;0.0369439150884129!GO:0005938;cell cortex;0.0371153623897348!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0377771109459803!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0377771109459803!GO:0004003;ATP-dependent DNA helicase activity;0.037853001503934!GO:0007021;tubulin folding;0.0379081617749319!GO:0007569;cell aging;0.0379366251545305!GO:0016860;intramolecular oxidoreductase activity;0.0379753413111591!GO:0043241;protein complex disassembly;0.0380059466772228!GO:0008538;proteasome activator activity;0.0386396886644226!GO:0042158;lipoprotein biosynthetic process;0.0387928349198352!GO:0045936;negative regulation of phosphate metabolic process;0.0388313106541613!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0392582401409367!GO:0000786;nucleosome;0.0396064905494092!GO:0006505;GPI anchor metabolic process;0.0396064905494092!GO:0004287;prolyl oligopeptidase activity;0.0396064905494092!GO:0006778;porphyrin metabolic process;0.0396064905494092!GO:0033013;tetrapyrrole metabolic process;0.0396064905494092!GO:0030522;intracellular receptor-mediated signaling pathway;0.0396160262298633!GO:0015923;mannosidase activity;0.0396160262298633!GO:0001666;response to hypoxia;0.0400956607986032!GO:0043624;cellular protein complex disassembly;0.0410158174952371!GO:0005657;replication fork;0.0410827292560037!GO:0019206;nucleoside kinase activity;0.041134448377013!GO:0051272;positive regulation of cell motility;0.0414305522936698!GO:0040017;positive regulation of locomotion;0.0414305522936698!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0414673913684132!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0414673913684132!GO:0022411;cellular component disassembly;0.0414673913684132!GO:0018193;peptidyl-amino acid modification;0.0414673913684132!GO:0046365;monosaccharide catabolic process;0.0414673913684132!GO:0030149;sphingolipid catabolic process;0.0414673913684132!GO:0007052;mitotic spindle organization and biogenesis;0.0416184098147177!GO:0007041;lysosomal transport;0.0429240542174663!GO:0043065;positive regulation of apoptosis;0.0447094154251369!GO:0006611;protein export from nucleus;0.0447094154251369!GO:0006378;mRNA polyadenylation;0.0447878893765097!GO:0005784;translocon complex;0.0447919061583025!GO:0006733;oxidoreduction coenzyme metabolic process;0.0447919061583025!GO:0030911;TPR domain binding;0.044950835600894!GO:0009225;nucleotide-sugar metabolic process;0.0461233647320519!GO:0004197;cysteine-type endopeptidase activity;0.047951001951484!GO:0030119;AP-type membrane coat adaptor complex;0.047951001951484!GO:0043068;positive regulation of programmed cell death;0.0489649010977337!GO:0005092;GDP-dissociation inhibitor activity;0.0492973867957928!GO:0003682;chromatin binding;0.049756370277353!GO:0043407;negative regulation of MAP kinase activity;0.0498303861025414 | |||
|sample_id=11759 | |sample_id=11759 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=ALX4:1.85540000246;SRF:1.69807659509;HIF1A:1.51875605608;HSF1,2:1.5185975209;PAX1,9:1.49453281609;ZNF238:1.48536779288;TAL1_TCF{3,4,12}:1.46789934041;TEF:1.35963240949;NFATC1..3:1.27216335827;HMGA1,2:1.24700083294;ZNF384:1.22506306722;EN1,2:1.04382271759;UFEwm:1.03098559886;NKX2-2,8:0.999445364783;NKX3-1:0.986677783731;TLX2:0.945777843892;CDC5L:0.934462328259;PAX8:0.918219942472;FOXL1:0.856260752048;MAFB:0.840978407334;ESR1:0.838396928118;IKZF1:0.810591997138;TEAD1:0.782646551137;EVI1:0.773296638733;MYBL2:0.764881402654;POU3F1..4:0.75548388537;HOX{A4,D4}:0.732781254813;NFE2L2:0.729541350657;PPARG:0.708312483586;NFE2L1:0.699937513602;BACH2:0.688115545173;PRDM1:0.679568239296;GZF1:0.669682349013;NKX2-1,4:0.666035085728;ATF6:0.65500246052;AHR_ARNT_ARNT2:0.641577243557;FOS_FOS{B,L1}_JUN{B,D}:0.640296917799;ZBTB6:0.637296711796;HOX{A5,B5}:0.612676404945;TLX1..3_NFIC{dimer}:0.608105544316;TP53:0.607133669667;NANOG{mouse}:0.576126868686;TBP:0.570275265389;NFIX:0.559380422292;PAX3,7:0.553630552222;bHLH_family:0.548516673052;PAX4:0.532054986378;ZIC1..3:0.515942268985;GTF2A1,2:0.514212470928;XBP1:0.510823063432;RXR{A,B,G}:0.45544040876;ARID5B:0.449084411831;HBP1_HMGB_SSRP1_UBTF:0.431575302353;GLI1..3:0.428956378398;SPZ1:0.427803442456;EBF1:0.419184300241;HLF:0.407674558812;PAX2:0.404818408114;GTF2I:0.398857498468;NFE2:0.389885505442;SOX17:0.353595956747;GATA4:0.339854438867;JUN:0.327609165447;ESRRA:0.318655724921;TBX4,5:0.317773886221;FOSL2:0.316688260336;NHLH1,2:0.294812971786;CREB1:0.284843113814;NR3C1:0.277362606665;TFCP2:0.263093659298;KLF4:0.258755065975;GFI1B:0.255882086163;RUNX1..3:0.247820588196;HES1:0.2475299758;AR:0.24065065148;ATF2:0.232732264939;TFAP4:0.220689035969;MTE{core}:0.214302441649;MZF1:0.207457654881;TFDP1:0.206685655018;NFKB1_REL_RELA:0.205852514187;STAT5{A,B}:0.188929603613;SREBF1,2:0.173824202615;AIRE:0.171298130374;ALX1:0.170079710264;LEF1_TCF7_TCF7L1,2:0.156358439008;HMX1:0.144911932645;SMAD1..7,9:0.140351500035;ZBTB16:0.138882215695;LHX3,4:0.136992075349;HNF1A:0.12919611061;ONECUT1,2:0.127235701614;NR6A1:0.118620986565;ZFP161:0.101759966832;TFAP2{A,C}:0.0893003414723;MEF2{A,B,C,D}:0.0855063724096;CRX:0.084074253647;RFX1:0.0779329602849;NKX6-1,2:0.0627881869371;ATF5_CREB3:0.061251213627;EGR1..3:0.059320946921;NKX3-2:0.0469513189435;XCPE1{core}:0.0334234938224;MED-1{core}:0.0262799368422;ELK1,4_GABP{A,B1}:0.0203485661674;DBP:-0.00242622158768;MAZ:-0.00397326990078;SOX5:-0.0129452446877;PBX1:-0.0142109928075;BPTF:-0.0160054987034;POU2F1..3:-0.0298915067538;SOX2:-0.0375595262497;TFAP2B:-0.0417949670507;YY1:-0.0589250376698;PATZ1:-0.0649453319662;MYFfamily:-0.0985213183547;RFX2..5_RFXANK_RFXAP:-0.101376569433;ELF1,2,4:-0.119971980101;NFIL3:-0.13330988104;REST:-0.134335397287;IRF1,2:-0.154410343028;STAT1,3:-0.156318834997;GCM1,2:-0.15914342309;RXRA_VDR{dimer}:-0.15927413367;ETS1,2:-0.162194384237;IKZF2:-0.18671146857;ZNF143:-0.202109049656;FOX{D1,D2}:-0.213110816085;CDX1,2,4:-0.222274768575;MYB:-0.23960500671;FOXD3:-0.242935538427;ZNF423:-0.243250403876;POU5F1:-0.263758507005;NRF1:-0.263908097058;RREB1:-0.303664339397;FOXM1:-0.306249647726;NR5A1,2:-0.315190928879;RORA:-0.31615672207;FOXN1:-0.329184193983;STAT2,4,6:-0.329436029224;GFI1:-0.332334853138;SPI1:-0.334939012386;HNF4A_NR2F1,2:-0.335384087479;SP1:-0.347943014675;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.358606377217;GATA6:-0.362700609257;HIC1:-0.382163608241;SOX{8,9,10}:-0.396740791512;DMAP1_NCOR{1,2}_SMARC:-0.41926279715;E2F1..5:-0.424507105336;OCT4_SOX2{dimer}:-0.437364379397;CEBPA,B_DDIT3:-0.442660838341;TOPORS:-0.446437222038;ATF4:-0.452089104216;IRF7:-0.452213731823;MTF1:-0.456669243398;FOXQ1:-0.458881685177;TGIF1:-0.463262637126;NR1H4:-0.465642288655;SPIB:-0.467948121986;POU1F1:-0.48020208432;FOX{I1,J2}:-0.486642520861;EP300:-0.50886652325;PRRX1,2:-0.517306591112;FOXP1:-0.532725187428;PAX6:-0.533520773896;POU6F1:-0.538022025472;FOXO1,3,4:-0.560968082459;ZNF148:-0.571348737549;HOXA9_MEIS1:-0.571823803259;FOXA2:-0.579386802609;PAX5:-0.579806093697;HAND1,2:-0.582697004784;ADNP_IRX_SIX_ZHX:-0.587012609697;NANOG:-0.604481342122;LMO2:-0.733815217444;NKX2-3_NKX2-5:-0.742267060852;NFY{A,B,C}:-0.778541345039;FOX{F1,F2,J1}:-0.830894970213;PDX1:-0.843898393816;CUX2:-0.885820887087;ZEB1:-0.962414389632;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.981405485299;RBPJ:-0.990572851419;T:-1.01240559138;SNAI1..3:-1.05186167111;BREu{core}:-1.10288427297;FOXP3:-1.10765884209;VSX1,2:-1.33130018326;MYOD1:-1.36278381192;PITX1..3:-1.49771008879;HOX{A6,A7,B6,B7}:-1.66477672442 | |top_motifs=ALX4:1.85540000246;SRF:1.69807659509;HIF1A:1.51875605608;HSF1,2:1.5185975209;PAX1,9:1.49453281609;ZNF238:1.48536779288;TAL1_TCF{3,4,12}:1.46789934041;TEF:1.35963240949;NFATC1..3:1.27216335827;HMGA1,2:1.24700083294;ZNF384:1.22506306722;EN1,2:1.04382271759;UFEwm:1.03098559886;NKX2-2,8:0.999445364783;NKX3-1:0.986677783731;TLX2:0.945777843892;CDC5L:0.934462328259;PAX8:0.918219942472;FOXL1:0.856260752048;MAFB:0.840978407334;ESR1:0.838396928118;IKZF1:0.810591997138;TEAD1:0.782646551137;EVI1:0.773296638733;MYBL2:0.764881402654;POU3F1..4:0.75548388537;HOX{A4,D4}:0.732781254813;NFE2L2:0.729541350657;PPARG:0.708312483586;NFE2L1:0.699937513602;BACH2:0.688115545173;PRDM1:0.679568239296;GZF1:0.669682349013;NKX2-1,4:0.666035085728;ATF6:0.65500246052;AHR_ARNT_ARNT2:0.641577243557;FOS_FOS{B,L1}_JUN{B,D}:0.640296917799;ZBTB6:0.637296711796;HOX{A5,B5}:0.612676404945;TLX1..3_NFIC{dimer}:0.608105544316;TP53:0.607133669667;NANOG{mouse}:0.576126868686;TBP:0.570275265389;NFIX:0.559380422292;PAX3,7:0.553630552222;bHLH_family:0.548516673052;PAX4:0.532054986378;ZIC1..3:0.515942268985;GTF2A1,2:0.514212470928;XBP1:0.510823063432;RXR{A,B,G}:0.45544040876;ARID5B:0.449084411831;HBP1_HMGB_SSRP1_UBTF:0.431575302353;GLI1..3:0.428956378398;SPZ1:0.427803442456;EBF1:0.419184300241;HLF:0.407674558812;PAX2:0.404818408114;GTF2I:0.398857498468;NFE2:0.389885505442;SOX17:0.353595956747;GATA4:0.339854438867;JUN:0.327609165447;ESRRA:0.318655724921;TBX4,5:0.317773886221;FOSL2:0.316688260336;NHLH1,2:0.294812971786;CREB1:0.284843113814;NR3C1:0.277362606665;TFCP2:0.263093659298;KLF4:0.258755065975;GFI1B:0.255882086163;RUNX1..3:0.247820588196;HES1:0.2475299758;AR:0.24065065148;ATF2:0.232732264939;TFAP4:0.220689035969;MTE{core}:0.214302441649;MZF1:0.207457654881;TFDP1:0.206685655018;NFKB1_REL_RELA:0.205852514187;STAT5{A,B}:0.188929603613;SREBF1,2:0.173824202615;AIRE:0.171298130374;ALX1:0.170079710264;LEF1_TCF7_TCF7L1,2:0.156358439008;HMX1:0.144911932645;SMAD1..7,9:0.140351500035;ZBTB16:0.138882215695;LHX3,4:0.136992075349;HNF1A:0.12919611061;ONECUT1,2:0.127235701614;NR6A1:0.118620986565;ZFP161:0.101759966832;TFAP2{A,C}:0.0893003414723;MEF2{A,B,C,D}:0.0855063724096;CRX:0.084074253647;RFX1:0.0779329602849;NKX6-1,2:0.0627881869371;ATF5_CREB3:0.061251213627;EGR1..3:0.059320946921;NKX3-2:0.0469513189435;XCPE1{core}:0.0334234938224;MED-1{core}:0.0262799368422;ELK1,4_GABP{A,B1}:0.0203485661674;DBP:-0.00242622158768;MAZ:-0.00397326990078;SOX5:-0.0129452446877;PBX1:-0.0142109928075;BPTF:-0.0160054987034;POU2F1..3:-0.0298915067538;SOX2:-0.0375595262497;TFAP2B:-0.0417949670507;YY1:-0.0589250376698;PATZ1:-0.0649453319662;MYFfamily:-0.0985213183547;RFX2..5_RFXANK_RFXAP:-0.101376569433;ELF1,2,4:-0.119971980101;NFIL3:-0.13330988104;REST:-0.134335397287;IRF1,2:-0.154410343028;STAT1,3:-0.156318834997;GCM1,2:-0.15914342309;RXRA_VDR{dimer}:-0.15927413367;ETS1,2:-0.162194384237;IKZF2:-0.18671146857;ZNF143:-0.202109049656;FOX{D1,D2}:-0.213110816085;CDX1,2,4:-0.222274768575;MYB:-0.23960500671;FOXD3:-0.242935538427;ZNF423:-0.243250403876;POU5F1:-0.263758507005;NRF1:-0.263908097058;RREB1:-0.303664339397;FOXM1:-0.306249647726;NR5A1,2:-0.315190928879;RORA:-0.31615672207;FOXN1:-0.329184193983;STAT2,4,6:-0.329436029224;GFI1:-0.332334853138;SPI1:-0.334939012386;HNF4A_NR2F1,2:-0.335384087479;SP1:-0.347943014675;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.358606377217;GATA6:-0.362700609257;HIC1:-0.382163608241;SOX{8,9,10}:-0.396740791512;DMAP1_NCOR{1,2}_SMARC:-0.41926279715;E2F1..5:-0.424507105336;OCT4_SOX2{dimer}:-0.437364379397;CEBPA,B_DDIT3:-0.442660838341;TOPORS:-0.446437222038;ATF4:-0.452089104216;IRF7:-0.452213731823;MTF1:-0.456669243398;FOXQ1:-0.458881685177;TGIF1:-0.463262637126;NR1H4:-0.465642288655;SPIB:-0.467948121986;POU1F1:-0.48020208432;FOX{I1,J2}:-0.486642520861;EP300:-0.50886652325;PRRX1,2:-0.517306591112;FOXP1:-0.532725187428;PAX6:-0.533520773896;POU6F1:-0.538022025472;FOXO1,3,4:-0.560968082459;ZNF148:-0.571348737549;HOXA9_MEIS1:-0.571823803259;FOXA2:-0.579386802609;PAX5:-0.579806093697;HAND1,2:-0.582697004784;ADNP_IRX_SIX_ZHX:-0.587012609697;NANOG:-0.604481342122;LMO2:-0.733815217444;NKX2-3_NKX2-5:-0.742267060852;NFY{A,B,C}:-0.778541345039;FOX{F1,F2,J1}:-0.830894970213;PDX1:-0.843898393816;CUX2:-0.885820887087;ZEB1:-0.962414389632;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.981405485299;RBPJ:-0.990572851419;T:-1.01240559138;SNAI1..3:-1.05186167111;BREu{core}:-1.10288427297;FOXP3:-1.10765884209;VSX1,2:-1.33130018326;MYOD1:-1.36278381192;PITX1..3:-1.49771008879;HOX{A6,A7,B6,B7}:-1.66477672442 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11759-123H4;search_select_hide=table117:FF:11759-123H4 | |||
}} | }} | ||
Latest revision as of 18:18, 4 June 2020
| Name: | mesenchymal precursor cell - ovarian cancer right ovary, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12375 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12375
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12375
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.783 |
| 10 | 10 | 0.244 |
| 100 | 100 | 0.259 |
| 101 | 101 | 0.582 |
| 102 | 102 | 0.253 |
| 103 | 103 | 0.776 |
| 104 | 104 | 0.947 |
| 105 | 105 | 0.853 |
| 106 | 106 | 0.151 |
| 107 | 107 | 0.387 |
| 108 | 108 | 0.904 |
| 109 | 109 | 0.986 |
| 11 | 11 | 0.668 |
| 110 | 110 | 0.0534 |
| 111 | 111 | 0.316 |
| 112 | 112 | 0.539 |
| 113 | 113 | 0.00467 |
| 114 | 114 | 0.464 |
| 115 | 115 | 0.485 |
| 116 | 116 | 0.344 |
| 117 | 117 | 0.177 |
| 118 | 118 | 0.719 |
| 119 | 119 | 0.275 |
| 12 | 12 | 0.458 |
| 120 | 120 | 0.0814 |
| 121 | 121 | 0.876 |
| 122 | 122 | 0.0619 |
| 123 | 123 | 0.00372 |
| 124 | 124 | 0.458 |
| 125 | 125 | 0.99 |
| 126 | 126 | 0.695 |
| 127 | 127 | 0.984 |
| 128 | 128 | 0.408 |
| 129 | 129 | 0.573 |
| 13 | 13 | 0.446 |
| 130 | 130 | 0.421 |
| 131 | 131 | 0.0365 |
| 132 | 132 | 0.758 |
| 133 | 133 | 0.888 |
| 134 | 134 | 0.12 |
| 135 | 135 | 0.733 |
| 136 | 136 | 0.481 |
| 137 | 137 | 0.862 |
| 138 | 138 | 0.557 |
| 139 | 139 | 0.406 |
| 14 | 14 | 0.178 |
| 140 | 140 | 0.356 |
| 141 | 141 | 0.511 |
| 142 | 142 | 0.622 |
| 143 | 143 | 0.0352 |
| 144 | 144 | 0.618 |
| 145 | 145 | 0.546 |
| 146 | 146 | 0.581 |
| 147 | 147 | 0.0457 |
| 148 | 148 | 0.799 |
| 149 | 149 | 0.308 |
| 15 | 15 | 0.443 |
| 150 | 150 | 0.0517 |
| 151 | 151 | 0.487 |
| 152 | 152 | 0.192 |
| 153 | 153 | 0.825 |
| 154 | 154 | 0.82 |
| 155 | 155 | 0.00328 |
| 156 | 156 | 0.285 |
| 157 | 157 | 0.31 |
| 158 | 158 | 0.038 |
| 159 | 159 | 0.0929 |
| 16 | 16 | 0.0226 |
| 160 | 160 | 0.317 |
| 161 | 161 | 0.359 |
| 162 | 162 | 0.614 |
| 163 | 163 | 0.221 |
| 164 | 164 | 0.0798 |
| 165 | 165 | 0.928 |
| 166 | 166 | 0.438 |
| 167 | 167 | 0.942 |
| 168 | 168 | 0.794 |
| 169 | 169 | 0.455 |
| 17 | 17 | 0.286 |
| 18 | 18 | 0.0656 |
| 19 | 19 | 0.0928 |
| 2 | 2 | 0.596 |
| 20 | 20 | 0.809 |
| 21 | 21 | 0.891 |
| 22 | 22 | 0.716 |
| 23 | 23 | 0.0113 |
| 24 | 24 | 0.429 |
| 25 | 25 | 0.19 |
| 26 | 26 | 0.301 |
| 27 | 27 | 0.757 |
| 28 | 28 | 0.255 |
| 29 | 29 | 0.204 |
| 3 | 3 | 0.434 |
| 30 | 30 | 0.776 |
| 31 | 31 | 0.77 |
| 32 | 32 | 3.05195e-7 |
| 33 | 33 | 0.863 |
| 34 | 34 | 0.903 |
| 35 | 35 | 0.208 |
| 36 | 36 | 0.108 |
| 37 | 37 | 0.072 |
| 38 | 38 | 0.734 |
| 39 | 39 | 0.383 |
| 4 | 4 | 0.499 |
| 40 | 40 | 0.145 |
| 41 | 41 | 0.816 |
| 42 | 42 | 0.981 |
| 43 | 43 | 0.656 |
| 44 | 44 | 0.33 |
| 45 | 45 | 0.54 |
| 46 | 46 | 0.328 |
| 47 | 47 | 0.515 |
| 48 | 48 | 0.644 |
| 49 | 49 | 0.221 |
| 5 | 5 | 0.306 |
| 50 | 50 | 0.446 |
| 51 | 51 | 0.899 |
| 52 | 52 | 0.835 |
| 53 | 53 | 0.125 |
| 54 | 54 | 0.977 |
| 55 | 55 | 0.184 |
| 56 | 56 | 0.512 |
| 57 | 57 | 0.955 |
| 58 | 58 | 0.217 |
| 59 | 59 | 0.768 |
| 6 | 6 | 0.321 |
| 60 | 60 | 0.57 |
| 61 | 61 | 0.894 |
| 62 | 62 | 0.969 |
| 63 | 63 | 0.715 |
| 64 | 64 | 0.856 |
| 65 | 65 | 0.358 |
| 66 | 66 | 0.132 |
| 67 | 67 | 0.508 |
| 68 | 68 | 0.891 |
| 69 | 69 | 0.386 |
| 7 | 7 | 0.31 |
| 70 | 70 | 0.874 |
| 71 | 71 | 0.413 |
| 72 | 72 | 0.77 |
| 73 | 73 | 0.0801 |
| 74 | 74 | 0.0477 |
| 75 | 75 | 0.463 |
| 76 | 76 | 0.537 |
| 77 | 77 | 0.0243 |
| 78 | 78 | 0.255 |
| 79 | 79 | 0.0596 |
| 8 | 8 | 0.676 |
| 80 | 80 | 0.767 |
| 81 | 81 | 0.545 |
| 82 | 82 | 0.777 |
| 83 | 83 | 0.872 |
| 84 | 84 | 0.915 |
| 85 | 85 | 0.0367 |
| 86 | 86 | 0.201 |
| 87 | 87 | 0.311 |
| 88 | 88 | 0.714 |
| 89 | 89 | 0.214 |
| 9 | 9 | 0.308 |
| 90 | 90 | 0.675 |
| 91 | 91 | 0.924 |
| 92 | 92 | 0.528 |
| 93 | 93 | 0.938 |
| 94 | 94 | 0.666 |
| 95 | 95 | 0.464 |
| 96 | 96 | 0.481 |
| 97 | 97 | 0.0971 |
| 98 | 98 | 0.0992 |
| 99 | 99 | 0.327 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12375
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000275 human mesenchymal precursor cell- ovarian cancer-right ovary sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002118 (right ovary)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000275 (human mesenchymal precursor cell- ovarian cancer-right ovary sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
