Personal tools

FFCP PHASE1:Mm9::chrX:143988640..143988653,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=210297
|EntrezGene=210297
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=F6VQ19,Q3UMG5
|UniProt=F6VQ19,Q3UMG5
|association_with_transcript=-16bp_to_ENSMUST00000136789,NM_001081173,uc009unk.1_5end
|association_with_transcript=-16bp_to_ENSMUST00000136789,NM_001081173,uc009unk.1_5end
|cluster_id=chrX:143988640..143988653,-
|description=CAGE_peak_2_at_Lrch2_5end
|description=CAGE_peak_2_at_Lrch2_5end
|id=chrX:143988640..143988653,-
|id=chrX:143988640..143988653,-
|ontology_enrichment_celltype=CL:0000540!6.09e-11!33;CL:0000047!6.09e-11!33;CL:0000031!6.09e-11!33;CL:0000404!6.09e-11!33;CL:0000393!4.36e-10!39;CL:0000211!4.36e-10!39;CL:0000117!1.87e-07!23;CL:0000337!1.87e-07!23;CL:0002319!7.34e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000540,5.23e-11,33;CL:0000047,5.23e-11,33;CL:0000031,5.23e-11,33;CL:0000404,5.23e-11,33;CL:0000393,5.59e-10,39;CL:0000211,5.59e-10,39;CL:0000117,1.41e-07,23;CL:0000337,1.41e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.26e-18!73;UBERON:0005743!1.26e-18!73;UBERON:0000073!7.96e-18!75;UBERON:0001016!7.96e-18!75;UBERON:0002346!7.87e-17!71;UBERON:0003075!7.87e-17!71;UBERON:0007284!7.87e-17!71;UBERON:0004121!3.01e-16!102;UBERON:0000924!3.01e-16!102;UBERON:0006601!3.01e-16!102;UBERON:0000033!8.24e-15!63;UBERON:0000955!9.10e-15!50;UBERON:0006238!9.10e-15!50;UBERON:0002616!4.24e-14!49;UBERON:0003056!7.13e-14!49;UBERON:0001049!7.55e-14!52;UBERON:0005068!7.55e-14!52;UBERON:0006241!7.55e-14!52;UBERON:0007135!7.55e-14!52;UBERON:0003080!5.08e-12!40;UBERON:0002020!9.69e-12!34;UBERON:0002780!1.12e-11!39;UBERON:0001890!1.12e-11!39;UBERON:0006240!1.12e-11!39;UBERON:0002791!5.99e-11!29;UBERON:0003528!5.99e-11!29;UBERON:0001893!5.99e-11!29;UBERON:0000956!1.58e-07!21;UBERON:0001869!1.58e-07!21;UBERON:0000203!1.58e-07!21;UBERON:0000153!1.60e-07!94;UBERON:0007811!9.29e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.40e-20,73;UBERON:0001016,5.85e-19,75;UBERON:0000073,1.18e-16,54;UBERON:0004121,3.30e-15,95;UBERON:0000924,3.30e-15,95;UBERON:0006601,3.30e-15,95;UBERON:0002346,3.51e-15,64;UBERON:0003075,3.51e-15,64;UBERON:0007284,3.51e-15,64;UBERON:0001049,4.75e-15,52;UBERON:0005068,4.75e-15,52;UBERON:0006241,4.75e-15,52;UBERON:0007135,4.75e-15,52;UBERON:0000955,6.16e-14,47;UBERON:0006238,6.16e-14,47;UBERON:0002616,4.24e-13,46;UBERON:0003056,2.42e-12,49;UBERON:0002020,4.15e-12,34;UBERON:0010371,4.38e-12,73;UBERON:0003080,6.48e-12,40;UBERON:0002780,1.85e-11,39;UBERON:0001890,1.85e-11,39;UBERON:0006240,1.85e-11,39;UBERON:0003528,6.78e-11,29;UBERON:0002791,6.78e-11,29;UBERON:0001893,6.78e-11,29;UBERON:0010314,1.03e-08,92;UBERON:0000956,4.31e-07,21;UBERON:0001869,4.31e-07,21;UBERON:0000203,4.31e-07,21
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,1.11514624341466,0.550640256485045,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,1.02903774414379,0,1.03134418455488,1.01158230429799,0.528990979272033,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,1.97010263386108,1.62007125998029,2.10324961351382,1.14260393761521,0.220868540951614,1.34739879136449,0.862609239164127,0.919218786610021,2.20231761998777,2.042997409363,3.68655679814984,0.923204014111357,1.00636407962651,3.64639359389732,1.3959149950069,3.37657566019008,2.90316670775939,1.47314292736834,1.85083185038834,1.67759501242771,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0.140444420131752,1.1930122580464,1.29893002301434,0.70667914902068,0.14084341977668,2.56652954828636,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0,0.258937883647172,1.92974780784272,0.520455980298408,0.608930956624282,0.922461989024234,0.753613202763113,1.17588707135705,0.753999547978053,0.494389935468748,0.289198713839823,0,0.647067399789637,0,0,0,4.9772735491963,1.25668024088073,0.255457055208591,0.11981512450592,0,0,1.49790639404823,2.28750301409313,3.64397621127307,2.43354048269187,3.3243009452943,2.28566849015516,2.10913641988085,1.52759045775474,0.497627882440372,0,0.631325567659422,0.910843100738926,0.919608417733892,1.26043490863744,2.41127708537144,1.83698547708585,1.66547836370305,1.3118241438362,0.776110112217047,0.862271971731369,2.83659120251729,1.58356011747554,0.43839146485515,1.39023624612799,1.0447564995665,0.411564272815887,0.59710280045548,0,0,0,0.414251545071004,0.938104239924385,0.720248245844059,0.710234206755631,0.787056926989615,0.308534225774757,0.465067889500816,0.536546802799238,0.700592054203017,0.16455984991348,0.32833492815819,0.486412857275134,0.292399974850665,0.219550115291051,0.268412837520744,3.78521907415429,3.80747065803352,0,0.264450566663544,1.49301775374664,2.55460339046482,1.67527699718721,0.80673409849337,1.11189021922435,0.570676878337677,0,0,0.754005626400808,1.1937388322469,0.58489226135736,0.898819408654221,0.648414149624083,0.597423819763102,0.569003702859245,1.25673363870702,1.1270773567308,1.22190796707189,0.387904974335251,1.1221731182451,0.758838445491087,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,1.46668478797823,1.69745085775188,1.87752198630802,0.670025029767263,0.714130922658041,0.390267295715598,1.10344600874334,0,0.797273843287435,0,0.518054945597687,0.289298117163023,0,0,0,0,1.9266070798535,1.64096361229084,1.3114795630134,0.757412781613119,0.94652465824877,0.780877488593277,1.72338718186239,1.67278158566786,2.67358408898873,1.69845918473299,2.02405350837447,3.21481443702443,1.97643888973262,5.46246237917072,1.13552068166615,0.890328018336276,2.28041743095006,0.659880491890142,0,1.21390318077491,0.906970670894253,0.188605079755898,0,0.922305443831782,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.02131881726136,1.98067203434441,0.646793418913773,0.428674070063185,1.59606210278046,0.891844088010353,1.15184314421485,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.484393280087717,0.301564624640779,0.596861720015682,0.492422699235184,0,1.8542530201051,0,0,1.48155621895769,0.376736914009382,0.410082683163076,0.457556346413045,0.679913719975421,0.139951452323658,0.138199973804424,0,1.26534397432454,0.813277868507395,0.324016022465404,1.25452977608681,0.218362563746178,0.809186078308924,0.826534557253359,0.26175594198403,0.648074866458964,0,0.56369293868419,0.897099276263873,0.330916980914195,0.777804753376191,0.258319646955462,0.844780627453891,0.938857909166032,0.781226309063701,1.36317147753424,1.69108884578204,0,0,0.608175645870493,0.924398614483445,0.77952493786677,0.358053391334963,0.198681354781265,0.120195449519969,0,0.201932899896295,0.15241361331,0,0.0974578807397524,0.192423683280659,0,0,0.443971906748129,0.717710852875806,0,2.31827512838629,0.563047426353546,0.36630324853453,0.214368379079066,0,2.25900737046827,2.76195141904306,3.43737308063638,1.89038500578056,2.74033007908257,1.5107877947794,1.35004500046361,0.900642406448441,0.906284817968409,2.07104124700728,1.764384908931,1.99512436700516,2.21953687480374,0.972426868273176,1.04806581313991,2.5738091183002,0.666740183404846,1.23621034343337,1.28367683836726,1.51618327058278,1.52087579934144,2.26351609663291,1.49826411951812,1.47257850531199,1.03383844120104,1.42888107384922,1.0429589335037,1.73618298417335,1.23625770240992,1.17759136107518,0.685738504770831,0.354951612318675,1.66905332963125,0.581385666529314,1.2234219453993,0.761531471025089,1.46342378298218,0.263069711437843,1.35804113845862,2.24456908663095,1.66089025373844,0.886540341380071,1.63692417267876,0.619747364743864,0.192906610981141,0.999242311751784,0.233931608445408,1.28922632428979,0.57386499620653,0.882365676478062,1.39120701372253
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,1.11514624341466,0.550640256485045,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,1.02903774414379,0,1.03134418455488,1.01158230429799,0.528990979272033,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,1.97010263386108,1.62007125998029,2.10324961351382,1.14260393761521,0.220868540951614,1.34739879136449,0.862609239164127,0.919218786610021,2.20231761998777,2.042997409363,3.68655679814984,0.923204014111357,1.00636407962651,3.64639359389732,1.3959149950069,3.37657566019008,2.90316670775939,1.47314292736834,1.85083185038834,1.67759501242771,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0.140444420131752,1.1930122580464,1.29893002301434,0.70667914902068,0.14084341977668,2.56652954828636,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0,0.258937883647172,1.92974780784272,0.520455980298408,0.608930956624282,0.922461989024234,0.753613202763113,1.17588707135705,0.753999547978053,0.494389935468748,0.289198713839823,0,0.647067399789637,0,0,0,4.9772735491963,1.25668024088073,0.255457055208591,0.11981512450592,0,0,1.49790639404823,2.28750301409313,3.64397621127307,2.43354048269187,3.3243009452943,2.28566849015516,2.10913641988085,1.52759045775474,0.497627882440372,0,0.631325567659422,0.910843100738926,0.919608417733892,1.26043490863744,2.41127708537144,1.83698547708585,1.66547836370305,1.3118241438362,0.776110112217047,0.862271971731369,2.83659120251729,1.58356011747554,0.43839146485515,1.39023624612799,1.0447564995665,0.411564272815887,0.59710280045548,0,0,0,0.414251545071004,0.938104239924385,0.720248245844059,0.710234206755631,0.787056926989615,0.308534225774757,0.465067889500816,0.536546802799238,0.700592054203017,0.16455984991348,0.32833492815819,0.486412857275134,0.292399974850665,0.219550115291051,0.268412837520744,3.78521907415429,3.80747065803352,0,0.264450566663544,1.49301775374664,2.55460339046482,1.67527699718721,0.80673409849337,1.11189021922435,0.570676878337677,0,0,0.754005626400808,1.1937388322469,0.58489226135736,0.898819408654221,0.648414149624083,0.597423819763102,0.569003702859245,1.25673363870702,1.1270773567308,1.22190796707189,0.387904974335251,1.1221731182451,0.758838445491087,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,1.46668478797823,1.69745085775188,1.87752198630802,0.670025029767263,0.714130922658041,0.390267295715598,1.10344600874334,0,0.797273843287435,0,0.518054945597687,0.289298117163023,0,0,0,0,1.9266070798535,1.64096361229084,1.3114795630134,0.757412781613119,0.94652465824877,0.780877488593277,1.72338718186239,1.67278158566786,2.67358408898873,1.69845918473299,2.02405350837447,3.21481443702443,1.97643888973262,5.46246237917072,1.13552068166615,0.890328018336276,2.28041743095006,0.659880491890142,0,1.21390318077491,0.906970670894253,0.188605079755898,0,0.922305443831782,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.02131881726136,1.98067203434441,0.646793418913773,0.428674070063185,1.59606210278046,0.891844088010353,1.15184314421485,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.484393280087717,0.301564624640779,0.596861720015682,0.492422699235184,0,1.8542530201051,0,0,1.48155621895769,0.376736914009382,0.410082683163076,0.457556346413045,0.679913719975421,0.139951452323658,0.138199973804424,0,1.26534397432454,0.813277868507395,0.324016022465404,1.25452977608681,0.218362563746178,0.809186078308924,0.826534557253359,0.26175594198403,0.648074866458964,0,0.56369293868419,0.897099276263873,0.330916980914195,0.777804753376191,0.258319646955462,0.844780627453891,0.938857909166032,0.781226309063701,1.36317147753424,1.69108884578204,0,0,0.608175645870493,0.924398614483445,0.77952493786677,0.358053391334963,0.198681354781265,0.120195449519969,0,0.201932899896295,0.15241361331,0,0.0974578807397524,0.192423683280659,0,0,0.443971906748129,0.717710852875806,0,2.31827512838629,0.563047426353546,0.36630324853453,0.214368379079066,0,2.25900737046827,2.76195141904306,3.43737308063638,1.89038500578056,2.74033007908257,1.5107877947794,1.35004500046361,0.900642406448441,0.906284817968409,2.07104124700728,1.764384908931,1.99512436700516,2.21953687480374,0.972426868273176,1.04806581313991,2.5738091183002,0.666740183404846,1.23621034343337,1.28367683836726,1.51618327058278,1.52087579934144,2.26351609663291,1.49826411951812,1.47257850531199,1.03383844120104,1.42888107384922,1.0429589335037,1.73618298417335,1.23625770240992,1.17759136107518,0.685738504770831,0.354951612318675,1.66905332963125,0.581385666529314,1.2234219453993,0.761531471025089,1.46342378298218,0.263069711437843,1.35804113845862,2.24456908663095,1.66089025373844,0.886540341380071,1.63692417267876,0.619747364743864,0.192906610981141,0.999242311751784,0.233931608445408,1.28922632428979,0.57386499620653,0.882365676478062,1.39120701372253
|short_description=p2@Lrch2
|short_description=p2@Lrch2
}}
}}

Latest revision as of 16:19, 1 October 2015

Short description:p2@Lrch2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lrch2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -16bp_to_ENSMUST00000136789, NM_001081173, uc009unk.1_5end
EntrezGene:Lrch2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lrch2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.23e-1133
neuronal stem cell5.23e-1133
neuroblast5.23e-1133
electrically signaling cell5.23e-1133
electrically responsive cell5.59e-1039
electrically active cell5.59e-1039
CNS neuron (sensu Vertebrata)1.41e-0723
neuroblast (sensu Vertebrata)1.41e-0723

Uber anatomy
Ontology termp-valuen
central nervous system5.40e-2073
nervous system5.85e-1975
regional part of nervous system1.18e-1654
ectoderm-derived structure3.30e-1595
ectoderm3.30e-1595
presumptive ectoderm3.30e-1595
neurectoderm3.51e-1564
neural plate3.51e-1564
presumptive neural plate3.51e-1564
neural tube4.75e-1552
neural rod4.75e-1552
future spinal cord4.75e-1552
neural keel4.75e-1552
brain6.16e-1447
future brain6.16e-1447
regional part of brain4.24e-1346
pre-chordal neural plate2.42e-1249
gray matter4.15e-1234
ecto-epithelium4.38e-1273
anterior neural tube6.48e-1240
regional part of forebrain1.85e-1139
forebrain1.85e-1139
future forebrain1.85e-1139
brain grey matter6.78e-1129
regional part of telencephalon6.78e-1129
telencephalon6.78e-1129
structure with developmental contribution from neural crest1.03e-0892
cerebral cortex4.31e-0721
cerebral hemisphere4.31e-0721
pallium4.31e-0721
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:143988640..143988653,-&oldid=4311312"