FFCP PHASE1:Mm9::chr9:111174336..111174418,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77781 | |EntrezGene=77781 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=483 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VEH5 | |UniProt=Q8VEH5 | ||
|association_with_transcript=0bp_to_ENSMUST00000060711,NM_175266,uc009rvr.1_5end | |association_with_transcript=0bp_to_ENSMUST00000060711,NM_175266,uc009rvr.1_5end | ||
|cluster_id=chr9:111174336..111174418,+ | |||
|description=CAGE_peak_1_at_Epm2aip1_5end | |description=CAGE_peak_1_at_Epm2aip1_5end | ||
|id=chr9:111174336..111174418,+ | |id=chr9:111174336..111174418,+ | ||
|ontology_enrichment_celltype=CL:0000117!8.58e-14!23;CL:0000337!8.58e-14!23;CL:0000540!7.22e-11!33;CL:0000047!7.22e-11!33;CL:0000031!7.22e-11!33;CL:0000404!7.22e-11!33;CL:0000393!9.36e-09!39;CL:0000211!9.36e-09!39 | |ontology_enrichment_celltype=CL:0000117!8.58e-14!23;CL:0000337!8.58e-14!23;CL:0000540!7.22e-11!33;CL:0000047!7.22e-11!33;CL:0000031!7.22e-11!33;CL:0000404!7.22e-11!33;CL:0000393!9.36e-09!39;CL:0000211!9.36e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.58e-14,23;CL:0000337,8.58e-14,23;CL:0000540,7.22e-11,33;CL:0000047,7.22e-11,33;CL:0000031,7.22e-11,33;CL:0000404,7.22e-11,33;CL:0000393,9.36e-09,39;CL:0000211,9.36e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.24e-21!94;UBERON:0000033!4.83e-21!63;UBERON:0007811!8.18e-21!86;UBERON:0002346!2.21e-20!71;UBERON:0003075!2.21e-20!71;UBERON:0007284!2.21e-20!71;UBERON:0001049!9.04e-19!52;UBERON:0005068!9.04e-19!52;UBERON:0006241!9.04e-19!52;UBERON:0007135!9.04e-19!52;UBERON:0000955!7.45e-18!50;UBERON:0006238!7.45e-18!50;UBERON:0003056!1.64e-17!49;UBERON:0001017!1.69e-17!73;UBERON:0005743!1.69e-17!73;UBERON:0002616!2.80e-17!49;UBERON:0004121!1.24e-16!102;UBERON:0000924!1.24e-16!102;UBERON:0006601!1.24e-16!102;UBERON:0000073!2.64e-16!75;UBERON:0001016!2.64e-16!75;UBERON:0002020!1.95e-15!34;UBERON:0003080!3.04e-15!40;UBERON:0002780!1.45e-14!39;UBERON:0001890!1.45e-14!39;UBERON:0006240!1.45e-14!39;UBERON:0002791!1.46e-12!29;UBERON:0003528!1.46e-12!29;UBERON:0001893!1.46e-12!29;UBERON:0000475!1.44e-08!200;UBERON:0000956!8.90e-08!21;UBERON:0001869!8.90e-08!21;UBERON:0000203!8.90e-08!21;UBERON:0004111!1.17e-07!122;UBERON:0000483!2.07e-07!181;UBERON:0000025!4.26e-07!114;UBERON:0000119!7.70e-07!183 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.03e-20,64;UBERON:0003075,1.03e-20,64;UBERON:0007284,1.03e-20,64;UBERON:0000073,2.83e-20,54;UBERON:0010314,4.74e-20,92;UBERON:0001049,9.04e-19,52;UBERON:0005068,9.04e-19,52;UBERON:0006241,9.04e-19,52;UBERON:0007135,9.04e-19,52;UBERON:0010371,1.23e-18,73;UBERON:0003056,1.64e-17,49;UBERON:0001017,1.69e-17,73;UBERON:0004121,2.15e-16,95;UBERON:0000924,2.15e-16,95;UBERON:0006601,2.15e-16,95;UBERON:0001016,2.64e-16,75;UBERON:0000955,8.21e-16,47;UBERON:0006238,8.21e-16,47;UBERON:0002020,1.95e-15,34;UBERON:0002616,2.96e-15,46;UBERON:0003080,3.04e-15,40;UBERON:0002780,1.45e-14,39;UBERON:0001890,1.45e-14,39;UBERON:0006240,1.45e-14,39;UBERON:0003528,1.46e-12,29;UBERON:0002791,1.46e-12,29;UBERON:0001893,1.46e-12,29;UBERON:0000956,8.90e-08,21;UBERON:0001869,8.90e-08,21;UBERON:0000203,8.90e-08,21;UBERON:0004111,1.17e-07,122;UBERON:0000025,4.26e-07,114;UBERON:0000483,6.10e-07,174 | |||
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| ||
|short_description=p1@Epm2aip1 | |short_description=p1@Epm2aip1 | ||
}} | }} |
Latest revision as of 06:14, 26 September 2015
Short description: | p1@Epm2aip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Epm2aip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:483 |
Association with transcript: | 0bp_to_ENSMUST00000060711, NM_175266, uc009rvr.1_5end |
EntrezGene: | Epm2aip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.58e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.58e-14 | 23 |
neuron | 7.22e-11 | 33 |
neuronal stem cell | 7.22e-11 | 33 |
neuroblast | 7.22e-11 | 33 |
electrically signaling cell | 7.22e-11 | 33 |
electrically responsive cell | 9.36e-09 | 39 |
electrically active cell | 9.36e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.03e-20 | 64 |
neural plate | 1.03e-20 | 64 |
presumptive neural plate | 1.03e-20 | 64 |
regional part of nervous system | 2.83e-20 | 54 |
structure with developmental contribution from neural crest | 4.74e-20 | 92 |
neural tube | 9.04e-19 | 52 |
neural rod | 9.04e-19 | 52 |
future spinal cord | 9.04e-19 | 52 |
neural keel | 9.04e-19 | 52 |
ecto-epithelium | 1.23e-18 | 73 |
pre-chordal neural plate | 1.64e-17 | 49 |
central nervous system | 1.69e-17 | 73 |
ectoderm-derived structure | 2.15e-16 | 95 |
ectoderm | 2.15e-16 | 95 |
presumptive ectoderm | 2.15e-16 | 95 |
nervous system | 2.64e-16 | 75 |
brain | 8.21e-16 | 47 |
future brain | 8.21e-16 | 47 |
gray matter | 1.95e-15 | 34 |
regional part of brain | 2.96e-15 | 46 |
anterior neural tube | 3.04e-15 | 40 |
regional part of forebrain | 1.45e-14 | 39 |
forebrain | 1.45e-14 | 39 |
future forebrain | 1.45e-14 | 39 |
brain grey matter | 1.46e-12 | 29 |
regional part of telencephalon | 1.46e-12 | 29 |
telencephalon | 1.46e-12 | 29 |
cerebral cortex | 8.90e-08 | 21 |
cerebral hemisphere | 8.90e-08 | 21 |
pallium | 8.90e-08 | 21 |
anatomical conduit | 1.17e-07 | 122 |
tube | 4.26e-07 | 114 |
epithelium | 6.10e-07 | 174 |