FFCP PHASE1:Hg19::chr10:104402213..104402251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104402213..104402251,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:104402213..104402251,+ | |description=CAGE_peak_at_chr10:104402213..104402251,+ | ||
|id=chr10:104402213..104402251,+ | |id=chr10:104402213..104402251,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.74e-23!42;CL:0000766!7.24e-20!76;CL:0000860!8.91e-20!45;CL:0000557!2.56e-15!71;CL:0002194!5.43e-15!63;CL:0000576!5.43e-15!63;CL:0000040!5.43e-15!63;CL:0000559!5.43e-15!63;CL:0002009!1.19e-14!65;CL:0000839!4.90e-14!70;CL:0000738!1.20e-13!140;CL:0000048!2.25e-11!430;CL:0000763!5.19e-11!112;CL:0000049!5.19e-11!112;CL:0000988!1.48e-10!182;CL:0000034!2.77e-10!444;CL:0000723!4.48e-10!436;CL:0002087!4.66e-10!119;CL:0000037!7.59e-10!172;CL:0000566!7.59e-10!172;CL:0000134!7.79e-10!358;CL:0002320!8.73e-10!365;CL:0002031!7.21e-09!124;CL:0002032!3.84e-08!165;CL:0000837!3.84e-08!165;CL:0000115!3.94e-08!35;CL:0000219!2.23e-07!390;CL:0002078!3.24e-07!44;CL:0000094!7.89e-07!8 | |ontology_enrichment_celltype=CL:0002057!1.74e-23!42;CL:0000766!7.24e-20!76;CL:0000860!8.91e-20!45;CL:0000557!2.56e-15!71;CL:0002194!5.43e-15!63;CL:0000576!5.43e-15!63;CL:0000040!5.43e-15!63;CL:0000559!5.43e-15!63;CL:0002009!1.19e-14!65;CL:0000839!4.90e-14!70;CL:0000738!1.20e-13!140;CL:0000048!2.25e-11!430;CL:0000763!5.19e-11!112;CL:0000049!5.19e-11!112;CL:0000988!1.48e-10!182;CL:0000034!2.77e-10!444;CL:0000723!4.48e-10!436;CL:0002087!4.66e-10!119;CL:0000037!7.59e-10!172;CL:0000566!7.59e-10!172;CL:0000134!7.79e-10!358;CL:0002320!8.73e-10!365;CL:0002031!7.21e-09!124;CL:0002032!3.84e-08!165;CL:0000837!3.84e-08!165;CL:0000115!3.94e-08!35;CL:0000219!2.23e-07!390;CL:0002078!3.24e-07!44;CL:0000094!7.89e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.97e-20;33!CL:0002057;3.97e-20;33!CL:0000473;8.23e-16;39!CL:0000234;8.23e-16;39!CL:0000576;1.38e-15;48!CL:0000766;1.12e-13;69!CL:0000094;6.02e-08;8!CL:0000115;6.82e-08;36!CL:0000763;4.04e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.05e-28,42;CL:0002057,7.05e-28,42;CL:0000766,1.56e-27,72;CL:0000473,8.15e-26,48;CL:0000234,8.15e-26,48;CL:0002194,1.51e-21,59;CL:0000576,1.51e-21,59;CL:0000040,1.51e-21,59;CL:0000559,1.51e-21,59;CL:0000557,1.57e-21,67;CL:0002009,6.01e-21,61;CL:0000839,3.07e-20,66;CL:0000763,3.92e-17,108;CL:0000049,3.92e-17,108;CL:0000738,8.38e-17,136;CL:0000988,5.48e-14,177;CL:0000037,1.28e-13,168;CL:0002087,8.23e-13,115;CL:0002032,1.35e-11,161;CL:0000837,1.35e-11,161;CL:0002031,1.50e-11,120;CL:0000115,3.04e-09,36;CL:0000048,3.61e-08,427;CL:0002078,6.26e-08,45;CL:0000094,6.90e-08,8;CL:0002320,7.90e-08,361;CL:0000134,9.94e-08,354;CL:0002393,1.59e-07,9;CL:0002397,1.59e-07,9;CL:0000034,2.10e-07,441;CL:0000723,2.29e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.11e-21!216;UBERON:0002193!3.85e-20!112;UBERON:0002390!5.65e-19!102;UBERON:0003061!5.65e-19!102;UBERON:0002405!7.02e-15!115;UBERON:0002371!1.46e-14!80;UBERON:0001474!6.55e-13!86;UBERON:0004765!2.50e-10!101;UBERON:0001434!2.50e-10!101;UBERON:0004535!5.19e-10!110;UBERON:0002204!1.30e-09!167;UBERON:0001009!1.68e-09!113;UBERON:0002384!2.92e-09!375;UBERON:0000025!3.93e-08!194;UBERON:0002020!1.00e-07!34;UBERON:0003528!1.00e-07!34;UBERON:0001049!1.36e-07!57;UBERON:0005068!1.36e-07!57;UBERON:0006241!1.36e-07!57;UBERON:0007135!1.36e-07!57;UBERON:0001893!1.52e-07!34;UBERON:0002791!2.09e-07!33;UBERON:0003080!3.23e-07!42;UBERON:0001869!3.26e-07!32;UBERON:0002780!4.24e-07!41;UBERON:0001890!4.24e-07!41;UBERON:0006240!4.24e-07!41;UBERON:0000178!6.89e-07!15;UBERON:0000179!6.89e-07!15;UBERON:0000463!6.89e-07!15 | |ontology_enrichment_uberon=UBERON:0003081!1.11e-21!216;UBERON:0002193!3.85e-20!112;UBERON:0002390!5.65e-19!102;UBERON:0003061!5.65e-19!102;UBERON:0002405!7.02e-15!115;UBERON:0002371!1.46e-14!80;UBERON:0001474!6.55e-13!86;UBERON:0004765!2.50e-10!101;UBERON:0001434!2.50e-10!101;UBERON:0004535!5.19e-10!110;UBERON:0002204!1.30e-09!167;UBERON:0001009!1.68e-09!113;UBERON:0002384!2.92e-09!375;UBERON:0000025!3.93e-08!194;UBERON:0002020!1.00e-07!34;UBERON:0003528!1.00e-07!34;UBERON:0001049!1.36e-07!57;UBERON:0005068!1.36e-07!57;UBERON:0006241!1.36e-07!57;UBERON:0007135!1.36e-07!57;UBERON:0001893!1.52e-07!34;UBERON:0002791!2.09e-07!33;UBERON:0003080!3.23e-07!42;UBERON:0001869!3.26e-07!32;UBERON:0002780!4.24e-07!41;UBERON:0001890!4.24e-07!41;UBERON:0006240!4.24e-07!41;UBERON:0000178!6.89e-07!15;UBERON:0000179!6.89e-07!15;UBERON:0000463!6.89e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.95e-07;15!UBERON:0000179;3.95e-07;15!UBERON:0000463;3.95e-07;15 | |||
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| ||
|short_description=p@chr10:104402213..104402251,+ | |short_description=p@chr10:104402213..104402251,+ | ||
}} | }} |
Latest revision as of 09:50, 23 July 2015
Short description: | p@chr10:104402213..104402251, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104402213..104402251, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.82e-25 | 108 |
hematopoietic system | 8.33e-25 | 98 |
blood island | 8.33e-25 | 98 |
lateral plate mesoderm | 1.49e-24 | 203 |
bone marrow | 5.57e-20 | 76 |
immune system | 3.38e-19 | 93 |
bone element | 1.30e-16 | 82 |
skeletal element | 1.15e-13 | 90 |
skeletal system | 5.01e-13 | 100 |
mesoderm | 1.10e-11 | 315 |
mesoderm-derived structure | 1.10e-11 | 315 |
presumptive mesoderm | 1.10e-11 | 315 |
musculoskeletal system | 8.18e-10 | 167 |
cardiovascular system | 3.75e-09 | 109 |
circulatory system | 1.21e-08 | 112 |
brain grey matter | 7.21e-08 | 34 |
gray matter | 7.21e-08 | 34 |
telencephalon | 1.14e-07 | 34 |
connective tissue | 1.19e-07 | 371 |
regional part of telencephalon | 1.68e-07 | 32 |
cerebral hemisphere | 2.84e-07 | 32 |
tube | 2.94e-07 | 192 |
neural tube | 3.42e-07 | 56 |
neural rod | 3.42e-07 | 56 |
future spinal cord | 3.42e-07 | 56 |
neural keel | 3.42e-07 | 56 |
blood | 3.63e-07 | 15 |
haemolymphatic fluid | 3.63e-07 | 15 |
organism substance | 3.63e-07 | 15 |
regional part of forebrain | 5.88e-07 | 41 |
forebrain | 5.88e-07 | 41 |
anterior neural tube | 5.88e-07 | 41 |
future forebrain | 5.88e-07 | 41 |