FFCP PHASE1:Hg19::chr10:90342964..90342986,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55328 | |EntrezGene=55328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25641 | |HGNC=25641 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VYX0 | |UniProt=Q5VYX0 | ||
|association_with_transcript=0bp_to_ENST00000331772_5end | |association_with_transcript=0bp_to_ENST00000331772_5end | ||
|cluster_id=chr10:90342964..90342986,- | |||
|description=CAGE_peak_2_at_RNLS_5end | |description=CAGE_peak_2_at_RNLS_5end | ||
|id=chr10:90342964..90342986,- | |id=chr10:90342964..90342986,- | ||
|ontology_enrichment_celltype=CL:0000136!3.03e-07!15 | |ontology_enrichment_celltype=CL:0000136!3.03e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.12e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.19e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0006603;5.84e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.45e-32!115;UBERON:0001049!4.95e-14!57;UBERON:0005068!4.95e-14!57;UBERON:0006241!4.95e-14!57;UBERON:0007135!4.95e-14!57;UBERON:0003075!5.99e-12!86;UBERON:0007284!5.99e-12!86;UBERON:0002616!1.79e-11!59;UBERON:0003080!9.67e-11!42;UBERON:0002346!2.20e-10!90;UBERON:0002780!3.05e-10!41;UBERON:0001890!3.05e-10!41;UBERON:0006240!3.05e-10!41;UBERON:0005743!9.50e-10!86;UBERON:0001017!2.16e-09!82;UBERON:0000153!6.43e-09!129;UBERON:0007811!6.43e-09!129;UBERON:0000955!1.09e-08!69;UBERON:0006238!1.09e-08!69;UBERON:0000033!1.84e-08!123;UBERON:0003056!5.07e-08!61;UBERON:0000073!7.40e-08!94;UBERON:0001016!7.40e-08!94;UBERON:0002020!1.52e-07!34;UBERON:0003528!1.52e-07!34;UBERON:0001893!2.14e-07!34;UBERON:0001869!5.32e-07!32;UBERON:0002791!5.86e-07!33;UBERON:0000475!8.48e-07!365;UBERON:0004121!8.78e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.18e-11;114!UBERON:0000073;3.06e-10;53!UBERON:0002616;3.06e-10;53!UBERON:0002780;9.09e-09;41!UBERON:0001890;9.09e-09;41!UBERON:0001950;3.48e-08;20!UBERON:0002619;4.88e-08;22!UBERON:0001893;1.07e-07;34!UBERON:0001869;1.39e-07;32!UBERON:0003528;2.60e-07;34!UBERON:0002020;2.60e-07;34!UBERON:0002791;6.37e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.51e-39,114;UBERON:0000073,1.41e-17,53;UBERON:0002616,1.41e-17,53;UBERON:0001049,8.08e-17,56;UBERON:0005068,8.08e-17,56;UBERON:0006241,8.08e-17,56;UBERON:0007135,8.08e-17,56;UBERON:0003075,4.25e-14,82;UBERON:0007284,4.25e-14,82;UBERON:0010314,3.64e-13,132;UBERON:0002346,9.48e-13,86;UBERON:0002780,1.28e-12,41;UBERON:0001890,1.28e-12,41;UBERON:0003080,1.28e-12,41;UBERON:0006240,1.28e-12,41;UBERON:0000955,1.40e-11,68;UBERON:0006238,1.40e-11,68;UBERON:0001017,1.00e-10,81;UBERON:0010371,2.57e-10,104;UBERON:0003056,1.02e-09,61;UBERON:0003528,2.82e-09,34;UBERON:0002020,2.82e-09,34;UBERON:0001869,3.97e-09,32;UBERON:0001893,4.58e-09,34;UBERON:0001016,5.37e-09,89;UBERON:0001950,1.38e-08,20;UBERON:0002619,2.07e-08,22;UBERON:0002791,5.07e-08,32;UBERON:0004732,6.02e-07,13;UBERON:0000956,7.27e-07,25;UBERON:0000203,7.27e-07,25;UBERON:0000200,7.66e-07,6;UBERON:0002298,7.74e-07,6 | |||
|phase1_expression=1.99846217197612,2.99740733447376,2.53717927372748,1.0007329835313,1.34088328328186,3.48935409640147,2.53299878168311,0.631719873426831,0.522371256399677,0.737201809504527,0,0,0.263766978228454,0.123766352960047,0.994192127183747,0.672325146451775,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0,0.85870796139317,0.684372125364421,0.502170558379211,0.305653622991805,0,0.314843125254717,0,0,0.309632246632152,0.919421224478927,0,0.369754010166788,0,0,0.293600439334847,0,0,0.217010870715852,1.56740831967947,1.29557466407592,0.77272670290256,0,0.755751887377619,0.242584061187816,0,0,0.619412741790207,0,0,0.236482229888585,0,0,0,0.376484679085209,0.545812300115692,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,3.51992488922645,1.09227722252426,1.77901850772711,0.426730222566507,0,2.87376219977242,1.32208974556972,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0,0.411202997999018,0,0.32592226663359,0.473447805734733,1.94826728407911,0,0,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,0.444859689486181,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.451725357233318,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.579297615531196,2.43806866313962,1.34140171940727,1.02290049474824,0.722878304769133,0,2.17269778441236,0.795285947051099,0.486634870302636,0.472674085820339,0.221729397462564,0.351339142772504,2.0956652079634,0,1.48313777113772,0.324547393654683,0.174129737299267,0,3.10037811596945,3.43196946468077,2.60020250930695,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0.267899184852239,0.44905874525234,0.563057402416611,0,0,0,0,0,0,0.993943903390637,1.2663051166458,0.264818361626438,0.573673241497627,0.709336764396714,0,0,0.74000264525148,1.24484414159907,0.134710672069688,0.326923806226917,0,0,0.468642863667593,0.624320153660641,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0,0.204154171254893,0.245668634623536,0.619954687054593,0,0.989067717114227,0,0,0.841680569770331,0,0.831192346452549,0.877955241761676,0.919463387397059,1.35214253015937,0.113432183160021,0.358779271377724,0.213557388818567,0.635795703478686,0.900273288253207,0.412210116953756,1.8034837803194,2.04728541964749,0.506328996723799,0.389748020644795,2.27190396819703,0.736399189138395,0.969876340912871,0.710019185033229,0.604512589365842,0.169560592310488,0.773043412653187,0.272746120590835,0.860413786167011,0.365921118388786,0.397589304964456,0.813357600086629,0.725627385107593,0.756962552626885,0,0,0,1.38134921352481,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,2.53510069643662,3.9313088667105,0.590789906681404,0,0.983907508344908,0.171567810298526,0.439001141634502,0,0,0.462942225792648,0,2.07986957055916,0,0.34779121492523,0.352226082707465,0,0,0,0.790204397959275,0.858486162094873,0.738651018262192,0.468008530278475,0.148631162288728,0,0.671928512795438,0.850650583454319,0.268675568108545,0.290633938513962,0.383382679165211,0,0.088048434013226,0.207328115540772,0.720599767084807,0.75745460055828,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0.336393253036082,0,0.07333828582095,0.387815147273333,0,0,1.59562869950922,1.04007436911366,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0.602878754119172,0,1.19967589418468,0,0,0,1.4377491329495,1.14861935834114,0,0.723906533337896,0.410952645100767,0.358121926479791,0.896681151948218,0.394061520403854,0,0.256686072559497,0.254094624222463,3.90419561572865,0,0.502548796003046,0.637938751653163,0,0,0.414415513436035,0.24538298343828,0.500170521059677,1.62759014219841,0.831883446123229,0,0.946214490203608,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.737476674166813,1.30325421702124,0.195801157462741,0,0.413536052245775,0,0.320182673410333,0,0,0.30239029332968,1.98486246255021,1.38115775959256,1.68396056659844,2.30650468660262,4.09365799253363,2.41280881715411,4.45254199334973,1.23367755042124,0.177561725313127,1.23190734020714,0,0.929683027679674,1.20859449591622,0.200506470303285,0.184161977871793,0.574072240823034,0,0.655622074797121,0,0.385076685522074,0,0,0,0,0,0,0,0.270946437543853,0,0.509752546090077,0.831076008928724,0,0.219259876645935,0,0.769350375349168,0,1.30151357865721,1.44257416306811,0.183138929636687,0.577566499444116,0.574265537996172,1.30012049207304,0,0.386682873168488,0.154048617114644,0.614014698904518,0.137836572484531,0.537101224341368,0.290033387828457,0.255679882248303,0.356128142586949,0.661139661443912,0.384380134730212,0.638063562472921,0.4046311234222,0.464845549297286,0.94443704049192,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0.318203247925937,1.56989728039846,0.179872457583315,0,0.706874414074119,0.606547444719948,0,1.2637753687169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|phase1_expression=1.99846217197612,2.99740733447376,2.53717927372748,1.0007329835313,1.34088328328186,3.48935409640147,2.53299878168311,0.631719873426831,0.522371256399677,0.737201809504527,0,0,0.263766978228454,0.123766352960047,0.994192127183747,0.672325146451775,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0,0.85870796139317,0.684372125364421,0.502170558379211,0.305653622991805,0,0.314843125254717,0,0,0.309632246632152,0.919421224478927,0,0.369754010166788,0,0,0.293600439334847,0,0,0.217010870715852,1.56740831967947,1.29557466407592,0.77272670290256,0,0.755751887377619,0.242584061187816,0,0,0.619412741790207,0,0,0.236482229888585,0,0,0,0.376484679085209,0.545812300115692,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,3.51992488922645,1.09227722252426,1.77901850772711,0.426730222566507,0,2.87376219977242,1.32208974556972,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0,0.411202997999018,0,0.32592226663359,0.473447805734733,1.94826728407911,0,0,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,0.444859689486181,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.451725357233318,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.579297615531196,2.43806866313962,1.34140171940727,1.02290049474824,0.722878304769133,0,2.17269778441236,0.795285947051099,0.486634870302636,0.472674085820339,0.221729397462564,0.351339142772504,2.0956652079634,0,1.48313777113772,0.324547393654683,0.174129737299267,0,3.10037811596945,3.43196946468077,2.60020250930695,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0.267899184852239,0.44905874525234,0.563057402416611,0,0,0,0,0,0,0.993943903390637,1.2663051166458,0.264818361626438,0.573673241497627,0.709336764396714,0,0,0.74000264525148,1.24484414159907,0.134710672069688,0.326923806226917,0,0,0.468642863667593,0.624320153660641,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0,0.204154171254893,0.245668634623536,0.619954687054593,0,0.989067717114227,0,0,0.841680569770331,0,0.831192346452549,0.877955241761676,0.919463387397059,1.35214253015937,0.113432183160021,0.358779271377724,0.213557388818567,0.635795703478686,0.900273288253207,0.412210116953756,1.8034837803194,2.04728541964749,0.506328996723799,0.389748020644795,2.27190396819703,0.736399189138395,0.969876340912871,0.710019185033229,0.604512589365842,0.169560592310488,0.773043412653187,0.272746120590835,0.860413786167011,0.365921118388786,0.397589304964456,0.813357600086629,0.725627385107593,0.756962552626885,0,0,0,1.38134921352481,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,2.53510069643662,3.9313088667105,0.590789906681404,0,0.983907508344908,0.171567810298526,0.439001141634502,0,0,0.462942225792648,0,2.07986957055916,0,0.34779121492523,0.352226082707465,0,0,0,0.790204397959275,0.858486162094873,0.738651018262192,0.468008530278475,0.148631162288728,0,0.671928512795438,0.850650583454319,0.268675568108545,0.290633938513962,0.383382679165211,0,0.088048434013226,0.207328115540772,0.720599767084807,0.75745460055828,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0.336393253036082,0,0.07333828582095,0.387815147273333,0,0,1.59562869950922,1.04007436911366,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0.602878754119172,0,1.19967589418468,0,0,0,1.4377491329495,1.14861935834114,0,0.723906533337896,0.410952645100767,0.358121926479791,0.896681151948218,0.394061520403854,0,0.256686072559497,0.254094624222463,3.90419561572865,0,0.502548796003046,0.637938751653163,0,0,0.414415513436035,0.24538298343828,0.500170521059677,1.62759014219841,0.831883446123229,0,0.946214490203608,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.737476674166813,1.30325421702124,0.195801157462741,0,0.413536052245775,0,0.320182673410333,0,0,0.30239029332968,1.98486246255021,1.38115775959256,1.68396056659844,2.30650468660262,4.09365799253363,2.41280881715411,4.45254199334973,1.23367755042124,0.177561725313127,1.23190734020714,0,0.929683027679674,1.20859449591622,0.200506470303285,0.184161977871793,0.574072240823034,0,0.655622074797121,0,0.385076685522074,0,0,0,0,0,0,0,0.270946437543853,0,0.509752546090077,0.831076008928724,0,0.219259876645935,0,0.769350375349168,0,1.30151357865721,1.44257416306811,0.183138929636687,0.577566499444116,0.574265537996172,1.30012049207304,0,0.386682873168488,0.154048617114644,0.614014698904518,0.137836572484531,0.537101224341368,0.290033387828457,0.255679882248303,0.356128142586949,0.661139661443912,0.384380134730212,0.638063562472921,0.4046311234222,0.464845549297286,0.94443704049192,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0.318203247925937,1.56989728039846,0.179872457583315,0,0.706874414074119,0.606547444719948,0,1.2637753687169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| ||
|short_description=p2@RNLS | |short_description=p2@RNLS | ||
}} | }} |
Latest revision as of 19:42, 19 September 2015
Short description: | p2@RNLS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNLS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000331772_5end |
EntrezGene: | RNLS |
HGNC: | 25641 |
UniProt: | Q5VYX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.19e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.51e-39 | 114 |
regional part of nervous system | 1.41e-17 | 53 |
regional part of brain | 1.41e-17 | 53 |
neural tube | 8.08e-17 | 56 |
neural rod | 8.08e-17 | 56 |
future spinal cord | 8.08e-17 | 56 |
neural keel | 8.08e-17 | 56 |
neural plate | 4.25e-14 | 82 |
presumptive neural plate | 4.25e-14 | 82 |
structure with developmental contribution from neural crest | 3.64e-13 | 132 |
neurectoderm | 9.48e-13 | 86 |
regional part of forebrain | 1.28e-12 | 41 |
forebrain | 1.28e-12 | 41 |
anterior neural tube | 1.28e-12 | 41 |
future forebrain | 1.28e-12 | 41 |
brain | 1.40e-11 | 68 |
future brain | 1.40e-11 | 68 |
central nervous system | 1.00e-10 | 81 |
ecto-epithelium | 2.57e-10 | 104 |
pre-chordal neural plate | 1.02e-09 | 61 |
brain grey matter | 2.82e-09 | 34 |
gray matter | 2.82e-09 | 34 |
cerebral hemisphere | 3.97e-09 | 32 |
telencephalon | 4.58e-09 | 34 |
nervous system | 5.37e-09 | 89 |
neocortex | 1.38e-08 | 20 |
regional part of cerebral cortex | 2.07e-08 | 22 |
regional part of telencephalon | 5.07e-08 | 32 |
segmental subdivision of nervous system | 6.02e-07 | 13 |
cerebral cortex | 7.27e-07 | 25 |
pallium | 7.27e-07 | 25 |
gyrus | 7.66e-07 | 6 |
brainstem | 7.74e-07 | 6 |