FFCP PHASE1:Hg19::chr15:28413731..28413765,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:28413731..28413765,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr15:28413731..28413765,- | |description=CAGE_peak_at_chr15:28413731..28413765,- | ||
|id=chr15:28413731..28413765,- | |id=chr15:28413731..28413765,- | ||
|ontology_enrichment_celltype=CL:0000148!9.72e-11!10;CL:0000541!9.72e-11!10;CL:0000147!4.26e-07!14 | |ontology_enrichment_celltype=CL:0000148!9.72e-11!10;CL:0000541!9.72e-11!10;CL:0000147!4.26e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.81e-28;10!CL:0000147;6.11e-20;14!CL:0002567;9.63e-19;3!CL:0002595;3.34e-18;5!CL:0000710;1.12e-13;20!CL:0002593;2.10e-12;2!CL:0000075;6.95e-10;27!CL:0000135;3.02e-08;3!CL:0000388;3.02e-08;3!CL:0002566;3.27e-07;1!CL:0002077;6.76e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.94e-28,10;CL:0000541,2.94e-28,10;CL:0000147,6.29e-20,14;CL:0002567,9.65e-19,3;CL:0002595,2.68e-18,5;CL:0000710,1.14e-13,20;CL:0002593,2.35e-12,2;CL:0000075,7.05e-10,27;CL:0000135,3.13e-08,3;CL:0000388,3.13e-08,3;CL:0002077,1.20e-07,34;CL:0002566,3.36e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.52e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.74e-10;31!DOID:1240;1.71e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.58e-10,31;DOID:1240,4.02e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.11e-17!57;UBERON:0005068!3.11e-17!57;UBERON:0006241!3.11e-17!57;UBERON:0007135!3.11e-17!57;UBERON:0007023!7.11e-16!115;UBERON:0002780!1.40e-14!41;UBERON:0001890!1.40e-14!41;UBERON:0006240!1.40e-14!41;UBERON:0003080!4.52e-14!42;UBERON:0002616!4.88e-14!59;UBERON:0001893!9.13e-14!34;UBERON:0003075!1.27e-13!86;UBERON:0007284!1.27e-13!86;UBERON:0002020!1.53e-13!34;UBERON:0003528!1.53e-13!34;UBERON:0002791!5.19e-13!33;UBERON:0002346!1.48e-12!90;UBERON:0001017!2.43e-12!82;UBERON:0005743!2.79e-12!86;UBERON:0000073!7.38e-12!94;UBERON:0001016!7.38e-12!94;UBERON:0001869!1.02e-11!32;UBERON:0000955!2.33e-11!69;UBERON:0006238!2.33e-11!69;UBERON:0003056!2.22e-09!61;UBERON:0000956!1.21e-08!25;UBERON:0000203!1.21e-08!25;UBERON:0002308!9.01e-07!9;UBERON:0000125!9.01e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;3.34e-18;5!UBERON:0001533;3.34e-18;5!UBERON:0003513;4.74e-13;7!UBERON:0002456;2.10e-12;2!UBERON:0007846;3.02e-08;3!UBERON:0000043;3.02e-08;3!UBERON:0007845;3.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.68e-18,5;UBERON:0001533,2.68e-18,5;UBERON:0003513,4.05e-13,7;UBERON:0002456,2.35e-12,2;UBERON:0007846,3.13e-08,3;UBERON:0000043,3.13e-08,3;UBERON:0007845,3.13e-08,3;UBERON:0000941,9.51e-07,1;UBERON:0001785,9.51e-07,1;UBERON:0002464,9.51e-07,1;UBERON:0004904,9.51e-07,1;UBERON:0001021,9.51e-07,1;UBERON:0003902,9.51e-07,1;UBERON:0005425,9.51e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,1.18009283054671,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910415432919148,0,2.21080014228679,0,0,0,2.09071047609954,0,0,0,0,0,0,0,1.05402583354441,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.724232594804119,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93706554829097,0,0.144119953416961,0,18.1603977675603,38.580830981386,83.2243875191334,39.3466625852222,15.5269513982019,23.7271015696695,22.5802881778157,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,1.49801404789436,0,0,0.12269149171914,2.00068208423871,0,0,0,0,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,4.14312932373184,4.22600587027022,0,0.141405431953713,1.13008116620243,0,1.99031692572366,4.38450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,1.66762242820452,0,0,0,0,0,0,0,0,0,0,0,1.39705560002972,0.766021480529467,18.8389488624256,3.24621940274555,7.58152380906339,0,0,0,0.50787533340481,0,0.403599414382095,0,0,0,0,0,7.03397143447345,0,0,4.59774653409171,1.33228787199128,23.9677908649344,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0.31396051279005,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0,0.611030144933625,0,0,0,0.943615861729479,0,0.937057782901357,0,0,0,0.394584402849391,0,0.61214552326098,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554645257684261,0.310482014706917,0,0,5.15606999641603,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.41023272848151,0,0.345786262321089,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.507326481551255,0,0.548257766857182,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.339848664884159,0.328863867814245,0,0,0,0.314231179832004,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.7515248846948,0,0,0,0,1.35866559210006,0,0,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0,0.509781344063451,0,0,0,0,0,0,0,0,0.573358332605805,0,0.475940431336403,0.436350690340377,0.5290268405154,0.743990036333503,2.77305377178851,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.413731983447581,0.426467963801962,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,1.18009283054671,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910415432919148,0,2.21080014228679,0,0,0,2.09071047609954,0,0,0,0,0,0,0,1.05402583354441,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.724232594804119,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93706554829097,0,0.144119953416961,0,18.1603977675603,38.580830981386,83.2243875191334,39.3466625852222,15.5269513982019,23.7271015696695,22.5802881778157,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,1.49801404789436,0,0,0.12269149171914,2.00068208423871,0,0,0,0,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,4.14312932373184,4.22600587027022,0,0.141405431953713,1.13008116620243,0,1.99031692572366,4.38450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,1.66762242820452,0,0,0,0,0,0,0,0,0,0,0,1.39705560002972,0.766021480529467,18.8389488624256,3.24621940274555,7.58152380906339,0,0,0,0.50787533340481,0,0.403599414382095,0,0,0,0,0,7.03397143447345,0,0,4.59774653409171,1.33228787199128,23.9677908649344,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0.31396051279005,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0,0.611030144933625,0,0,0,0.943615861729479,0,0.937057782901357,0,0,0,0.394584402849391,0,0.61214552326098,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554645257684261,0.310482014706917,0,0,5.15606999641603,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.41023272848151,0,0.345786262321089,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.507326481551255,0,0.548257766857182,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.339848664884159,0.328863867814245,0,0,0,0.314231179832004,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.7515248846948,0,0,0,0,1.35866559210006,0,0,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0,0.509781344063451,0,0,0,0,0,0,0,0,0.573358332605805,0,0.475940431336403,0.436350690340377,0.5290268405154,0.743990036333503,2.77305377178851,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.413731983447581,0.426467963801962,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr15:28413731..28413765,- | |short_description=p@chr15:28413731..28413765,- | ||
}} | }} |
Latest revision as of 00:35, 25 July 2015
Short description: | p@chr15:28413731..28413765, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:28413731..28413765, - |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.94e-28 | 10 |
melanoblast | 2.94e-28 | 10 |
pigment cell | 6.29e-20 | 14 |
light melanocyte | 9.65e-19 | 3 |
smooth muscle cell of the subclavian artery | 2.68e-18 | 5 |
neurecto-epithelial cell | 1.14e-13 | 20 |
smooth muscle cell of the internal thoracic artery | 2.35e-12 | 2 |
columnar/cuboidal epithelial cell | 7.05e-10 | 27 |
fibrocyte | 3.13e-08 | 3 |
tendon cell | 3.13e-08 | 3 |
ecto-epithelial cell | 1.20e-07 | 34 |
dark melanocyte | 3.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 2.68e-18 | 5 |
subclavian artery | 2.68e-18 | 5 |
trunk blood vessel | 4.05e-13 | 7 |
internal thoracic artery | 2.35e-12 | 2 |
dense regular connective tissue | 3.13e-08 | 3 |
tendon | 3.13e-08 | 3 |
regular connective tissue | 3.13e-08 | 3 |
cranial nerve II | 9.51e-07 | 1 |
cranial nerve | 9.51e-07 | 1 |
nerve trunk | 9.51e-07 | 1 |
nerve connecting eye with brain | 9.51e-07 | 1 |
nerve | 9.51e-07 | 1 |
retinal neural layer | 9.51e-07 | 1 |
presumptive neural retina | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.58e-10 | 31 |
leukemia | 4.02e-08 | 39 |