FFCP PHASE1:Hg19::chr11:65414827..65414866,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6494 | |EntrezGene=6494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10885 | |HGNC=10885 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000531339_5end | |association_with_transcript=0bp_to_ENST00000531339_5end | ||
|cluster_id=chr11:65414827..65414866,+ | |||
|description=CAGE_peak_2_at_SIPA1_5end | |description=CAGE_peak_2_at_SIPA1_5end | ||
|id=chr11:65414827..65414866,+ | |id=chr11:65414827..65414866,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.90e-20!254;CL:0000223!1.40e-10!59;CL:0002076!1.44e-10!43;CL:0002321!1.85e-08!248;CL:0000220!5.53e-08!246;CL:1000449!2.12e-07!16;CL:1000497!4.02e-07!18;CL:0002518!4.02e-07!18 | |ontology_enrichment_celltype=CL:0000066!1.90e-20!254;CL:0000223!1.40e-10!59;CL:0002076!1.44e-10!43;CL:0002321!1.85e-08!248;CL:0000220!5.53e-08!246;CL:1000449!2.12e-07!16;CL:1000497!4.02e-07!18;CL:0002518!4.02e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.18e-08;42!CL:1000507;3.77e-08;10!CL:1000494;3.77e-08;10!CL:1000449;5.39e-08;15!CL:1000497;8.31e-08;17!CL:0002518;8.31e-08;17!CL:0000349;8.81e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.54e-22,253;CL:0000223,3.17e-12,58;CL:0002076,4.66e-12,42;CL:1000507,4.12e-08,10;CL:1000494,4.12e-08,10;CL:1000449,6.46e-08,15;CL:1000497,9.88e-08,17;CL:0002518,9.88e-08,17;CL:0002321,2.53e-07,250;CL:0000349,9.38e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;4.47e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.01e-22!347;UBERON:0000466!1.69e-19!126;UBERON:0000468!2.85e-19!659;UBERON:0004119!5.61e-19!169;UBERON:0000925!5.61e-19!169;UBERON:0006595!5.61e-19!169;UBERON:0000922!2.00e-18!612;UBERON:0000475!2.18e-17!365;UBERON:0000464!3.55e-17!104;UBERON:0002050!5.75e-16!605;UBERON:0005423!5.75e-16!605;UBERON:0000923!6.11e-16!604;UBERON:0005291!6.11e-16!604;UBERON:0006598!6.11e-16!604;UBERON:0002532!6.11e-16!604;UBERON:0000483!1.92e-15!309;UBERON:0000119!5.74e-15!312;UBERON:0005177!8.16e-15!107;UBERON:0000467!2.29e-14!625;UBERON:0001007!3.22e-14!155;UBERON:0001555!3.22e-14!155;UBERON:0007026!3.22e-14!155;UBERON:0000480!3.99e-14!626;UBERON:0000064!6.44e-14!219;UBERON:0000062!1.23e-13!511;UBERON:0003104!5.45e-13!238;UBERON:0009142!5.45e-13!238;UBERON:0000477!6.05e-13!286;UBERON:0000077!2.01e-12!130;UBERON:0004111!3.88e-12!241;UBERON:0002553!7.51e-12!70;UBERON:0004921!5.49e-11!129;UBERON:0004185!5.49e-11!129;UBERON:0002100!6.51e-11!216;UBERON:0001048!1.63e-10!168;UBERON:0009569!1.99e-10!113;UBERON:0005911!2.40e-09!82;UBERON:0001444!2.72e-09!48;UBERON:0003886!3.33e-09!63;UBERON:0000058!5.80e-09!26;UBERON:0004121!7.18e-09!169;UBERON:0001041!1.44e-08!98;UBERON:0000924!1.47e-08!173;UBERON:0006601!1.47e-08!173;UBERON:0000033!2.75e-08!123;UBERON:0000025!3.07e-08!194;UBERON:0000080!4.05e-08!18;UBERON:0002120!4.05e-08!18;UBERON:0004875!4.05e-08!18;UBERON:0005721!4.05e-08!18;UBERON:0005754!4.05e-08!18;UBERON:0007297!4.05e-08!18;UBERON:0000153!6.93e-08!129;UBERON:0007811!6.93e-08!129;UBERON:0003064!8.25e-08!37;UBERON:0004876!8.45e-08!20;UBERON:0005172!1.31e-07!55;UBERON:0005173!1.31e-07!55;UBERON:0006555!1.46e-07!17;UBERON:0005103!1.46e-07!17;UBERON:0000083!1.46e-07!17;UBERON:0009201!1.46e-07!17;UBERON:0004819!1.46e-07!17;UBERON:0006553!1.46e-07!17;UBERON:0003074!1.46e-07!17;UBERON:0003060!1.46e-07!17;UBERON:0001008!1.60e-07!45;UBERON:0004211!2.12e-07!16;UBERON:0001285!2.12e-07!16;UBERON:0007684!2.12e-07!16;UBERON:0003220!2.12e-07!16;UBERON:0004208!2.12e-07!16;UBERON:0006554!2.86e-07!44;UBERON:0003887!5.17e-07!21;UBERON:0002417!6.30e-07!61;UBERON:0000916!6.30e-07!61;UBERON:0005156!7.13e-07!59;UBERON:0000990!7.13e-07!59;UBERON:0005256!8.89e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.77e-08;10!UBERON:0009773;3.77e-08;10!UBERON:0001231;3.77e-08;10!UBERON:0004810;3.77e-08;10!UBERON:0006555;5.39e-08;15!UBERON:0004819;5.39e-08;15!UBERON:0001285;5.39e-08;15!UBERON:0007684;5.39e-08;15!UBERON:0006554;2.34e-07;30!UBERON:0001008;2.34e-07;30!UBERON:0000020;3.07e-07;23!UBERON:0007811;3.76e-07;52!UBERON:0000033;4.07e-07;50!UBERON:0004921;4.32e-07;33!UBERON:0001456;7.01e-07;21 | |||
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| ||
|short_description=p2@SIPA1 | |short_description=p2@SIPA1 | ||
}} | }} |
Latest revision as of 10:31, 19 September 2015
Short description: | p2@SIPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIPA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000531339_5end |
EntrezGene: | SIPA1 |
HGNC: | 10885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.54e-22 | 253 |
endodermal cell | 3.17e-12 | 58 |
endo-epithelial cell | 4.66e-12 | 42 |
kidney tubule cell | 4.12e-08 | 10 |
nephron tubule epithelial cell | 4.12e-08 | 10 |
epithelial cell of nephron | 6.46e-08 | 15 |
kidney cell | 9.88e-08 | 17 |
kidney epithelial cell | 9.88e-08 | 17 |
embryonic cell | 2.53e-07 | 250 |
extraembryonic cell | 9.38e-07 | 19 |