FFCP PHASE1:Hg19::chr17:36507718..36507759,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30837 | |EntrezGene=30837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29846 | |HGNC=29846 | ||
|TSSclassifier=strong | |||
|UniProt=O14512 | |UniProt=O14512 | ||
|association_with_transcript=-245bp_to_ENST00000331159,uc002hqa.2,uc002hqb.2,uc010cvl.2_5end | |association_with_transcript=-245bp_to_ENST00000331159,uc002hqa.2,uc002hqb.2,uc010cvl.2_5end | ||
|cluster_id=chr17:36507718..36507759,+ | |||
|description=CAGE_peak_1_at_SOCS7_5end | |description=CAGE_peak_1_at_SOCS7_5end | ||
|id=chr17:36507718..36507759,+ | |id=chr17:36507718..36507759,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.67e-10!143;DOID:305!1.02e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.18e-09,143;DOID:305,1.78e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.82e-20!57;UBERON:0005068!4.82e-20!57;UBERON:0006241!4.82e-20!57;UBERON:0007135!4.82e-20!57;UBERON:0001017!4.76e-19!82;UBERON:0000073!5.54e-19!94;UBERON:0001016!5.54e-19!94;UBERON:0007023!3.56e-18!115;UBERON:0005743!7.85e-18!86;UBERON:0003080!1.93e-17!42;UBERON:0002780!3.00e-17!41;UBERON:0001890!3.00e-17!41;UBERON:0006240!3.00e-17!41;UBERON:0002616!3.83e-17!59;UBERON:0001893!7.66e-17!34;UBERON:0002020!1.03e-16!34;UBERON:0003528!1.03e-16!34;UBERON:0001869!2.86e-16!32;UBERON:0002791!3.03e-16!33;UBERON:0000955!1.13e-15!69;UBERON:0006238!1.13e-15!69;UBERON:0002346!3.50e-14!90;UBERON:0000924!8.34e-14!173;UBERON:0006601!8.34e-14!173;UBERON:0002619!3.69e-13!22;UBERON:0003075!5.23e-13!86;UBERON:0007284!5.23e-13!86;UBERON:0004121!8.93e-13!169;UBERON:0000956!2.40e-12!25;UBERON:0000203!2.40e-12!25;UBERON:0001950!4.52e-12!20;UBERON:0003056!3.27e-11!61;UBERON:0000153!1.77e-09!129;UBERON:0007811!1.77e-09!129;UBERON:0000033!9.45e-09!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.22e-15;32!UBERON:0001893;5.69e-15;34!UBERON:0002791;6.97e-15;32!UBERON:0003528;1.18e-14;34!UBERON:0002020;1.18e-14;34!UBERON:0002619;6.01e-14;22!UBERON:0002780;4.98e-13;41!UBERON:0001890;4.98e-13;41!UBERON:0001950;8.40e-13;20!UBERON:0000956;1.24e-12;25!UBERON:0000203;1.24e-12;25!UBERON:0000073;1.51e-11;53!UBERON:0002616;1.51e-11;53!UBERON:0001016;7.75e-08;83!UBERON:0000955;1.10e-07;68!UBERON:0001017;3.47e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.04e-20,56;UBERON:0005068,5.04e-20,56;UBERON:0006241,5.04e-20,56;UBERON:0007135,5.04e-20,56;UBERON:0000073,7.66e-20,53;UBERON:0002616,7.66e-20,53;UBERON:0001016,1.83e-19,89;UBERON:0001017,1.26e-18,81;UBERON:0007023,2.64e-18,114;UBERON:0002780,2.16e-17,41;UBERON:0001890,2.16e-17,41;UBERON:0003080,2.16e-17,41;UBERON:0006240,2.16e-17,41;UBERON:0001893,3.78e-17,34;UBERON:0003528,5.09e-17,34;UBERON:0002020,5.09e-17,34;UBERON:0001869,1.45e-16,32;UBERON:0002791,2.53e-16,32;UBERON:0000955,3.30e-15,68;UBERON:0006238,3.30e-15,68;UBERON:0002619,2.16e-13,22;UBERON:0002346,4.18e-13,86;UBERON:0000956,1.46e-12,25;UBERON:0000203,1.46e-12,25;UBERON:0004121,2.00e-12,171;UBERON:0000924,2.00e-12,171;UBERON:0006601,2.00e-12,171;UBERON:0001950,2.78e-12,20;UBERON:0003075,6.16e-12,82;UBERON:0007284,6.16e-12,82;UBERON:0011216,8.97e-12,223;UBERON:0003056,1.72e-11,61;UBERON:0010371,3.71e-11,104 | |||
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| ||
|short_description=p1@SOCS7 | |short_description=p1@SOCS7 | ||
}} | }} |
Latest revision as of 18:48, 19 September 2015
Short description: | p1@SOCS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOCS7_5end |
Coexpression cluster: | NA |
Association with transcript: | -245bp_to_ENST00000331159, uc002hqa.2, uc002hqb.2, uc010cvl.2_5end |
EntrezGene: | SOCS7 |
HGNC: | 29846 |
UniProt: | O14512 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.04e-20 | 56 |
neural rod | 5.04e-20 | 56 |
future spinal cord | 5.04e-20 | 56 |
neural keel | 5.04e-20 | 56 |
regional part of nervous system | 7.66e-20 | 53 |
regional part of brain | 7.66e-20 | 53 |
nervous system | 1.83e-19 | 89 |
central nervous system | 1.26e-18 | 81 |
adult organism | 2.64e-18 | 114 |
regional part of forebrain | 2.16e-17 | 41 |
forebrain | 2.16e-17 | 41 |
anterior neural tube | 2.16e-17 | 41 |
future forebrain | 2.16e-17 | 41 |
telencephalon | 3.78e-17 | 34 |
brain grey matter | 5.09e-17 | 34 |
gray matter | 5.09e-17 | 34 |
cerebral hemisphere | 1.45e-16 | 32 |
regional part of telencephalon | 2.53e-16 | 32 |
brain | 3.30e-15 | 68 |
future brain | 3.30e-15 | 68 |
regional part of cerebral cortex | 2.16e-13 | 22 |
neurectoderm | 4.18e-13 | 86 |
cerebral cortex | 1.46e-12 | 25 |
pallium | 1.46e-12 | 25 |
ectoderm-derived structure | 2.00e-12 | 171 |
ectoderm | 2.00e-12 | 171 |
presumptive ectoderm | 2.00e-12 | 171 |
neocortex | 2.78e-12 | 20 |
neural plate | 6.16e-12 | 82 |
presumptive neural plate | 6.16e-12 | 82 |
organ system subdivision | 8.97e-12 | 223 |
pre-chordal neural plate | 1.72e-11 | 61 |
ecto-epithelium | 3.71e-11 | 104 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.18e-09 | 143 |
carcinoma | 1.78e-08 | 106 |