FFCP PHASE1:Hg19::chr17:63534783..63534784,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:63534783..63534784,- | |||
|coexpression_cluster_id=C2429 | |||
|description=CAGE_peak_at_chr17:63534783..63534784,- | |description=CAGE_peak_at_chr17:63534783..63534784,- | ||
|id=chr17:63534783..63534784,- | |id=chr17:63534783..63534784,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.10e-09;7!CL:0000586;3.10e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.11e-09,7;CL:0000586,3.11e-09,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;2.39e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.56e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-23!115;UBERON:0001049!5.29e-18!57;UBERON:0005068!5.29e-18!57;UBERON:0006241!5.29e-18!57;UBERON:0007135!5.29e-18!57;UBERON:0001017!1.98e-16!82;UBERON:0002780!2.88e-16!41;UBERON:0001890!2.88e-16!41;UBERON:0006240!2.88e-16!41;UBERON:0005743!5.10e-16!86;UBERON:0003080!1.72e-15!42;UBERON:0000073!3.05e-15!94;UBERON:0001016!3.05e-15!94;UBERON:0001893!1.00e-14!34;UBERON:0000955!1.14e-14!69;UBERON:0006238!1.14e-14!69;UBERON:0002020!1.75e-14!34;UBERON:0003528!1.75e-14!34;UBERON:0001869!2.39e-14!32;UBERON:0002791!2.49e-14!33;UBERON:0002346!2.90e-14!90;UBERON:0002616!4.50e-14!59;UBERON:0003075!5.14e-14!86;UBERON:0007284!5.14e-14!86;UBERON:0000956!8.52e-14!25;UBERON:0000203!8.52e-14!25;UBERON:0002619!4.60e-13!22;UBERON:0001950!1.03e-11!20;UBERON:0003056!4.49e-10!61;UBERON:0000153!3.72e-09!129;UBERON:0007811!3.72e-09!129;UBERON:0000033!3.07e-08!123;UBERON:0000924!1.05e-07!173;UBERON:0006601!1.05e-07!173;UBERON:0004121!2.05e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.21e-15;22!UBERON:0000956;6.83e-13;25!UBERON:0000203;6.83e-13;25!UBERON:0001950;1.93e-12;20!UBERON:0002791;1.07e-11;32!UBERON:0001869;1.14e-11;32!UBERON:0001893;1.39e-11;34!UBERON:0003528;1.96e-10;34!UBERON:0002020;1.96e-10;34!UBERON:0002780;3.82e-10;41!UBERON:0001890;3.82e-10;41!UBERON:0000073;6.67e-08;53!UBERON:0002616;6.67e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.10e-14,22;UBERON:0000956,1.56e-12,25;UBERON:0000203,1.56e-12,25;UBERON:0001893,2.76e-12,34;UBERON:0002780,4.16e-12,41;UBERON:0001890,4.16e-12,41;UBERON:0003080,4.16e-12,41;UBERON:0006240,4.16e-12,41;UBERON:0001049,4.43e-12,56;UBERON:0005068,4.43e-12,56;UBERON:0006241,4.43e-12,56;UBERON:0007135,4.43e-12,56;UBERON:0001950,6.03e-12,20;UBERON:0002791,7.39e-12,32;UBERON:0001869,7.39e-12,32;UBERON:0000073,1.09e-11,53;UBERON:0002616,1.09e-11,53;UBERON:0001017,6.03e-11,81;UBERON:0003528,6.29e-11,34;UBERON:0002020,6.29e-11,34;UBERON:0001016,8.14e-11,89;UBERON:0000955,8.67e-11,68;UBERON:0006238,8.67e-11,68;UBERON:0007023,9.17e-11,114;UBERON:0011216,6.56e-10,223;UBERON:0002346,9.70e-09,86;UBERON:0003075,1.08e-08,82;UBERON:0007284,1.08e-08,82;UBERON:0003056,2.76e-08,61 | |||
|phase1_expression=0,0,0.281908808191942,0,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0.369363174230364,0,0,0.85870796139317,0.410623275218653,0.376627918784408,0.382067028739756,0.328402357799783,0.708397031823113,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27685187643779,0.587237189370939,0.382273228125229,0,0,0,1.7703879310245,2.75107533924415,2.46721798799411,0.167186495390678,0,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0,0,0,0.164437904603676,0.829050053357545,0.579606171470105,2.37258501059297,1.07016331235885,7.31748666634838,0.113309342697566,0.383220493601921,0,0,1.27426165729639,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,1.20964045934839,1.06976078313403,1.73789284659359,2.43806866313962,0,0,0.722878304769133,0,0.434539556882471,0,0.486634870302636,0.189069634328136,0,0.263504357079378,1.17881167947941,0,0,0.324547393654683,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.417989933073621,0.258416759169329,0,0,0,0,0.24406205754817,0.735326160691737,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0.573673241497627,0.709336764396714,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.809364721840658,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0.358779271377724,0.213557388818567,0,0.300091096084402,0.309157587715317,0.515281080091258,0.37223371266318,0,0,0.252433774244115,0,0,0.710019185033229,0,0,0,0,0,0.975789649036763,0.927708378250397,0.348581828608555,0.518305275076852,1.00928340350251,1.82488679537915,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0.737930631258681,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0,0.207328115540772,0.288239906833923,0.37872730027914,0.317489471460845,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0.394061520403854,1.07813787429759,0.641715181398742,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0,0,0.767309866440312,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.492762936082855,0.519254429183621,0.116210378459959,1.45031339509947,0.200506470303285,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0.618246069886334,0.732555718546747,0.41254749960294,0,0,0,0.096670718292122,0.154048617114644,0,0.413509717453592,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,1.52927441428475,0,1.66762242820452,0.822724546172388,1.94541993357815,0.540031437238115,0.79312517629427,0.106824071127473,0,0.490080431962063,0,0,1.06712765022621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.606802608747567,0,19.6053941296425,0.23874448473769,0,0.307160702099232,0.994147647766298,1.1253553312841,0.445234820091624,0,1.68900326502395,1.19548792950642,1.10513566212459,0,0.102268682502155,0,0,0,1.25314822272926,0,0.394573622547734,0,0,2.90799823828566,0.0927680981618513,3.99227596002388,0,0.262379999988587,0,0,0,0,1.37897349296586,0.583209226766509,1.04174996959975,0,0.964771509003264,0,0.995213339381022,1.47773809476774,0.658156191461918,0,0,0.923403102045565,0.113942055847001,1.61394733071642,1.25660702173681,1.3037684630641,0.31900115973192,0.0915975934018623,1.5991043280559,0,0,0,0,0.19606253431774,0,0,0,0,0,1.69623685720729,15.5799820614306,2.98578579323551,0.530745387020035,0.611030144933625,0.296521128680622,0.370691816839509,0.522109747527277,1.01101699471016,0.802577647298789,0.702793337176017,0,0,0,1.97292201424695,7.25944296291983,2.44858209304392,0.442306057399416,0,0.622129148383483,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,2.57979048707425,0,0,0,0.0969890164884194,0,0,0,0,1.2029051231617,0.782205530939212,0.320635281006135,0.213452994739353,0.599428828746391,0,16.4932698478919,2.74551996579143,0,0.124252535565433,0,0.135904206073614,0,0.305994652908965,0,0,0.821432273351958,0,0,0.788662062837943,0.558564802544508,0.687481272035051,1.43574604915363,0.998395002494955,1.28767814440971,0.223171457441873,0.873385142327441,0,10.4846354574708,2.91497774536727,2.55489160981616,4.04421263125109,0.78741985211799,0,2.38568906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| ||
|short_description=p@chr17:63534783..63534784,- | |short_description=p@chr17:63534783..63534784,- | ||
}} | }} |
Latest revision as of 19:59, 25 July 2015
Short description: | p@chr17:63534783..63534784, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:63534783..63534784, - |
Coexpression cluster: | C2429_alveolar_synovial_gastric_signet_hepatoblastoma_small_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.11e-09 | 7 |
germ cell | 3.11e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.10e-14 | 22 |
cerebral cortex | 1.56e-12 | 25 |
pallium | 1.56e-12 | 25 |
telencephalon | 2.76e-12 | 34 |
regional part of forebrain | 4.16e-12 | 41 |
forebrain | 4.16e-12 | 41 |
anterior neural tube | 4.16e-12 | 41 |
future forebrain | 4.16e-12 | 41 |
neural tube | 4.43e-12 | 56 |
neural rod | 4.43e-12 | 56 |
future spinal cord | 4.43e-12 | 56 |
neural keel | 4.43e-12 | 56 |
neocortex | 6.03e-12 | 20 |
regional part of telencephalon | 7.39e-12 | 32 |
cerebral hemisphere | 7.39e-12 | 32 |
regional part of nervous system | 1.09e-11 | 53 |
regional part of brain | 1.09e-11 | 53 |
central nervous system | 6.03e-11 | 81 |
brain grey matter | 6.29e-11 | 34 |
gray matter | 6.29e-11 | 34 |
nervous system | 8.14e-11 | 89 |
brain | 8.67e-11 | 68 |
future brain | 8.67e-11 | 68 |
adult organism | 9.17e-11 | 114 |
organ system subdivision | 6.56e-10 | 223 |
neurectoderm | 9.70e-09 | 86 |
neural plate | 1.08e-08 | 82 |
presumptive neural plate | 1.08e-08 | 82 |
pre-chordal neural plate | 2.76e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.56e-08 | 14 |