FFCP PHASE1:Hg19::chr11:46142948..46143043,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:46142948..46143043,-
|short_description=p1@PHF21A
|description=CAGE_peak_1_at_PHF21A_5end
|association_with_transcript=0bp_to_ENST00000257821,NM_001101802...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51317 | |EntrezGene=51317 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24156 | |HGNC=24156 | ||
|TSSclassifier=strong | |||
|UniProt=Q96BD5 | |UniProt=Q96BD5 | ||
|association_with_transcript=0bp_to_ENST00000257821,NM_001101802,NM_016621,uc001ncb.3,uc001ncc.3,uc001nce.2,uc009ykx.2_5end | |||
|cluster_id=chr11:46142948..46143043,- | |||
|description=CAGE_peak_1_at_PHF21A_5end | |||
|id=chr11:46142948..46143043,- | |||
|ontology_enrichment_celltype=CL:0000738!5.72e-23!140;CL:0000037!5.17e-21!172;CL:0000566!5.17e-21!172;CL:0002032!1.45e-19!165;CL:0000837!1.45e-19!165;CL:0000988!9.55e-19!182;CL:0002031!7.20e-17!124;CL:0002087!7.59e-17!119;CL:0000542!4.72e-14!53;CL:0000051!4.72e-14!53;CL:0000838!1.11e-13!52;CL:0000945!4.26e-09!24;CL:0000826!4.26e-09!24;CL:0000766!4.01e-08!76;CL:0000763!9.85e-08!112;CL:0000049!9.85e-08!112;CL:0002057!2.45e-07!42;CL:0000860!2.68e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.33e-09;24!CL:0000542;2.38e-08;53!CL:0002087;2.75e-07;104!CL:0000236;9.08e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.10e-23,136;CL:0000037,1.52e-21,168;CL:0002032,4.36e-20,161;CL:0000837,4.36e-20,161;CL:0000988,1.86e-19,177;CL:0002087,1.76e-17,115;CL:0002031,1.77e-17,120;CL:0000542,4.72e-14,53;CL:0000051,4.72e-14,53;CL:0000838,1.11e-13,52;CL:0000945,4.26e-09,24;CL:0000826,4.26e-09,24;CL:0000766,1.32e-08,72;CL:0000763,4.71e-08,108;CL:0000049,4.71e-08,108;CL:0000860,2.45e-07,42;CL:0002057,2.45e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000051;2.38e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.51e-22!115;UBERON:0001049!2.70e-18!57;UBERON:0005068!2.70e-18!57;UBERON:0006241!2.70e-18!57;UBERON:0007135!2.70e-18!57;UBERON:0000073!5.58e-17!94;UBERON:0001016!5.58e-17!94;UBERON:0003080!6.70e-16!42;UBERON:0002780!9.04e-16!41;UBERON:0001890!9.04e-16!41;UBERON:0006240!9.04e-16!41;UBERON:0001017!1.43e-15!82;UBERON:0005743!3.38e-15!86;UBERON:0002616!4.21e-14!59;UBERON:0002346!1.61e-13!90;UBERON:0003075!2.37e-13!86;UBERON:0007284!2.37e-13!86;UBERON:0001893!4.47e-13!34;UBERON:0002020!4.67e-13!34;UBERON:0003528!4.67e-13!34;UBERON:0000955!5.06e-13!69;UBERON:0006238!5.06e-13!69;UBERON:0002791!8.70e-13!33;UBERON:0001869!3.59e-12!32;UBERON:0003056!8.74e-11!61;UBERON:0002390!8.59e-10!102;UBERON:0003061!8.59e-10!102;UBERON:0000956!1.05e-09!25;UBERON:0000203!1.05e-09!25;UBERON:0002619!1.98e-09!22;UBERON:0001950!1.12e-08!20;UBERON:0002193!1.34e-08!112;UBERON:0000178!1.08e-07!15;UBERON:0000179!1.08e-07!15;UBERON:0000463!1.08e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.04e-12;41!UBERON:0001890;8.04e-12;41!UBERON:0001893;2.78e-11;34!UBERON:0003528;2.96e-11;34!UBERON:0002020;2.96e-11;34!UBERON:0002791;2.98e-11;32!UBERON:0001869;4.78e-11;32!UBERON:0000073;5.43e-11;53!UBERON:0002616;5.43e-11;53!UBERON:0000956;7.18e-10;25!UBERON:0000203;7.18e-10;25!UBERON:0002619;1.41e-09;22!UBERON:0001950;8.93e-09;20!UBERON:0000178;1.01e-07;15!UBERON:0000179;1.01e-07;15!UBERON:0000463;1.01e-07;15!UBERON:0001016;3.45e-07;83!UBERON:0007023;7.35e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.02e-21,114;UBERON:0001049,3.81e-18,56;UBERON:0005068,3.81e-18,56;UBERON:0006241,3.81e-18,56;UBERON:0007135,3.81e-18,56;UBERON:0000073,1.92e-17,53;UBERON:0002616,1.92e-17,53;UBERON:0001016,3.53e-17,89;UBERON:0002780,9.04e-16,41;UBERON:0001890,9.04e-16,41;UBERON:0003080,9.04e-16,41;UBERON:0006240,9.04e-16,41;UBERON:0001017,2.13e-15,81;UBERON:0001893,4.47e-13,34;UBERON:0003528,4.67e-13,34;UBERON:0002020,4.67e-13,34;UBERON:0000955,7.45e-13,68;UBERON:0006238,7.45e-13,68;UBERON:0002346,1.34e-12,86;UBERON:0003075,1.97e-12,82;UBERON:0007284,1.97e-12,82;UBERON:0002791,2.36e-12,32;UBERON:0001869,3.59e-12,32;UBERON:0003056,4.68e-11,61;UBERON:0002390,3.12e-10,98;UBERON:0003061,3.12e-10,98;UBERON:0000956,1.05e-09,25;UBERON:0000203,1.05e-09,25;UBERON:0002619,1.98e-09,22;UBERON:0002193,5.88e-09,108;UBERON:0001950,1.12e-08,20;UBERON:0010371,9.67e-08,104;UBERON:0000178,1.08e-07,15;UBERON:0000179,1.08e-07,15;UBERON:0000463,1.08e-07,15 | |||
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| ||
|short_description=p1@PHF21A | |||
}} | }} |
Latest revision as of 02:01, 18 September 2015
Short description: | p1@PHF21A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHF21A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000257821, NM_001101802, NM_016621, uc001ncb.3, uc001ncc.3, uc001nce.2, uc009ykx.2_5end |
EntrezGene: | PHF21A |
HGNC: | 24156 |
UniProt: | Q96BD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.10e-23 | 136 |
hematopoietic stem cell | 1.52e-21 | 168 |
hematopoietic oligopotent progenitor cell | 4.36e-20 | 161 |
hematopoietic multipotent progenitor cell | 4.36e-20 | 161 |
hematopoietic cell | 1.86e-19 | 177 |
nongranular leukocyte | 1.76e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 1.77e-17 | 120 |
lymphocyte | 4.72e-14 | 53 |
common lymphoid progenitor | 4.72e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.11e-13 | 52 |
lymphocyte of B lineage | 4.26e-09 | 24 |
pro-B cell | 4.26e-09 | 24 |
myeloid leukocyte | 1.32e-08 | 72 |
myeloid cell | 4.71e-08 | 108 |
common myeloid progenitor | 4.71e-08 | 108 |
classical monocyte | 2.45e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.02e-21 | 114 |
neural tube | 3.81e-18 | 56 |
neural rod | 3.81e-18 | 56 |
future spinal cord | 3.81e-18 | 56 |
neural keel | 3.81e-18 | 56 |
regional part of nervous system | 1.92e-17 | 53 |
regional part of brain | 1.92e-17 | 53 |
nervous system | 3.53e-17 | 89 |
regional part of forebrain | 9.04e-16 | 41 |
forebrain | 9.04e-16 | 41 |
anterior neural tube | 9.04e-16 | 41 |
future forebrain | 9.04e-16 | 41 |
central nervous system | 2.13e-15 | 81 |
telencephalon | 4.47e-13 | 34 |
brain grey matter | 4.67e-13 | 34 |
gray matter | 4.67e-13 | 34 |
brain | 7.45e-13 | 68 |
future brain | 7.45e-13 | 68 |
neurectoderm | 1.34e-12 | 86 |
neural plate | 1.97e-12 | 82 |
presumptive neural plate | 1.97e-12 | 82 |
regional part of telencephalon | 2.36e-12 | 32 |
cerebral hemisphere | 3.59e-12 | 32 |
pre-chordal neural plate | 4.68e-11 | 61 |
hematopoietic system | 3.12e-10 | 98 |
blood island | 3.12e-10 | 98 |
cerebral cortex | 1.05e-09 | 25 |
pallium | 1.05e-09 | 25 |
regional part of cerebral cortex | 1.98e-09 | 22 |
hemolymphoid system | 5.88e-09 | 108 |
neocortex | 1.12e-08 | 20 |
ecto-epithelium | 9.67e-08 | 104 |
blood | 1.08e-07 | 15 |
haemolymphatic fluid | 1.08e-07 | 15 |
organism substance | 1.08e-07 | 15 |