FFCP PHASE1:Hg19::chr1:212003673..212003722,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9926 | |EntrezGene=9926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28985 | |HGNC=28985 | ||
|TSSclassifier=strong | |||
|UniProt=Q92604 | |UniProt=Q92604 | ||
|association_with_transcript=-93bp_to_ENST00000366996_5end | |association_with_transcript=-93bp_to_ENST00000366996_5end | ||
|cluster_id=chr1:212003673..212003722,- | |||
|description=CAGE_peak_2_at_LPGAT1_5end | |description=CAGE_peak_2_at_LPGAT1_5end | ||
|id=chr1:212003673..212003722,- | |id=chr1:212003673..212003722,- | ||
|ontology_enrichment_celltype=CL:0002057!9.34e-16!42;CL:0000860!2.07e-15!45;CL:0000766!1.65e-12!76;CL:0002009!4.41e-12!65;CL:0002194!6.29e-12!63;CL:0000576!6.29e-12!63;CL:0000040!6.29e-12!63;CL:0000559!6.29e-12!63;CL:0000557!2.17e-09!71;CL:0000839!1.31e-08!70 | |ontology_enrichment_celltype=CL:0002057!9.34e-16!42;CL:0000860!2.07e-15!45;CL:0000766!1.65e-12!76;CL:0002009!4.41e-12!65;CL:0002194!6.29e-12!63;CL:0000576!6.29e-12!63;CL:0000040!6.29e-12!63;CL:0000559!6.29e-12!63;CL:0000557!2.17e-09!71;CL:0000839!1.31e-08!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.62e-14;33!CL:0002057;5.62e-14;33!CL:0000473;7.88e-11;39!CL:0000234;7.88e-11;39!CL:0000576;2.17e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.67e-16,42;CL:0002057,7.67e-16,42;CL:0000473,1.90e-14,48;CL:0000234,1.90e-14,48;CL:0000766,2.87e-12,72;CL:0002009,5.38e-12,61;CL:0002194,7.58e-12,59;CL:0000576,7.58e-12,59;CL:0000040,7.58e-12,59;CL:0000559,7.58e-12,59;CL:0000557,4.10e-09,67;CL:0000839,2.51e-08,66 | |||
|ontology_enrichment_development_v019=CL:0002057;9.18e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.31e-19!115;UBERON:0001049!1.12e-13!57;UBERON:0005068!1.12e-13!57;UBERON:0006241!1.12e-13!57;UBERON:0007135!1.12e-13!57;UBERON:0000062!1.30e-13!511;UBERON:0003080!7.89e-12!42;UBERON:0002780!1.29e-11!41;UBERON:0001890!1.29e-11!41;UBERON:0006240!1.29e-11!41;UBERON:0000955!3.41e-10!69;UBERON:0006238!3.41e-10!69;UBERON:0002616!1.10e-09!59;UBERON:0001893!1.15e-09!34;UBERON:0002020!1.65e-09!34;UBERON:0003528!1.65e-09!34;UBERON:0002791!3.32e-09!33;UBERON:0002390!4.32e-09!102;UBERON:0003061!4.32e-09!102;UBERON:0001869!1.40e-08!32;UBERON:0003075!3.25e-08!86;UBERON:0007284!3.25e-08!86;UBERON:0005743!8.62e-08!86;UBERON:0001017!1.08e-07!82;UBERON:0002193!4.22e-07!112;UBERON:0003056!6.58e-07!61;UBERON:0002619!6.82e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.53e-09;41!UBERON:0001890;3.53e-09;41!UBERON:0001893;7.89e-09;34!UBERON:0003528;2.25e-08;34!UBERON:0002020;2.25e-08;34!UBERON:0002791;3.53e-08;32!UBERON:0001869;4.07e-08;32!UBERON:0000073;3.30e-07;53!UBERON:0002616;3.30e-07;53!UBERON:0002619;3.71e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.45e-19,114;UBERON:0001049,2.82e-13,56;UBERON:0005068,2.82e-13,56;UBERON:0006241,2.82e-13,56;UBERON:0007135,2.82e-13,56;UBERON:0000073,5.28e-12,53;UBERON:0002616,5.28e-12,53;UBERON:0002780,1.12e-11,41;UBERON:0001890,1.12e-11,41;UBERON:0003080,1.12e-11,41;UBERON:0006240,1.12e-11,41;UBERON:0000955,8.63e-10,68;UBERON:0006238,8.63e-10,68;UBERON:0001893,1.03e-09,34;UBERON:0003528,1.48e-09,34;UBERON:0002020,1.48e-09,34;UBERON:0002390,7.99e-09,98;UBERON:0003061,7.99e-09,98;UBERON:0002791,1.06e-08,32;UBERON:0001869,1.27e-08,32;UBERON:0003075,2.20e-08,82;UBERON:0007284,2.20e-08,82;UBERON:0011216,3.52e-08,223;UBERON:0001017,2.17e-07,81;UBERON:0003056,3.81e-07,61;UBERON:0002619,6.33e-07,22;UBERON:0002193,8.91e-07,108 | |||
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| ||
|short_description=p2@LPGAT1 | |short_description=p2@LPGAT1 | ||
}} | }} |
Latest revision as of 23:18, 24 September 2015
Short description: | p2@LPGAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LPGAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -93bp_to_ENST00000366996_5end |
EntrezGene: | LPGAT1 |
HGNC: | 28985 |
UniProt: | Q92604 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.67e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.67e-16 | 42 |
defensive cell | 1.90e-14 | 48 |
phagocyte | 1.90e-14 | 48 |
myeloid leukocyte | 2.87e-12 | 72 |
macrophage dendritic cell progenitor | 5.38e-12 | 61 |
monopoietic cell | 7.58e-12 | 59 |
monocyte | 7.58e-12 | 59 |
monoblast | 7.58e-12 | 59 |
promonocyte | 7.58e-12 | 59 |
granulocyte monocyte progenitor cell | 4.10e-09 | 67 |
myeloid lineage restricted progenitor cell | 2.51e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.45e-19 | 114 |
neural tube | 2.82e-13 | 56 |
neural rod | 2.82e-13 | 56 |
future spinal cord | 2.82e-13 | 56 |
neural keel | 2.82e-13 | 56 |
regional part of nervous system | 5.28e-12 | 53 |
regional part of brain | 5.28e-12 | 53 |
regional part of forebrain | 1.12e-11 | 41 |
forebrain | 1.12e-11 | 41 |
anterior neural tube | 1.12e-11 | 41 |
future forebrain | 1.12e-11 | 41 |
brain | 8.63e-10 | 68 |
future brain | 8.63e-10 | 68 |
telencephalon | 1.03e-09 | 34 |
brain grey matter | 1.48e-09 | 34 |
gray matter | 1.48e-09 | 34 |
hematopoietic system | 7.99e-09 | 98 |
blood island | 7.99e-09 | 98 |
regional part of telencephalon | 1.06e-08 | 32 |
cerebral hemisphere | 1.27e-08 | 32 |
neural plate | 2.20e-08 | 82 |
presumptive neural plate | 2.20e-08 | 82 |
organ system subdivision | 3.52e-08 | 223 |
central nervous system | 2.17e-07 | 81 |
pre-chordal neural plate | 3.81e-07 | 61 |
regional part of cerebral cortex | 6.33e-07 | 22 |
hemolymphoid system | 8.91e-07 | 108 |