FFCP PHASE1:Hg19::chr17:46675539..46675551,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3216 | |EntrezGene=3216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5117 | |HGNC=5117 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_AB464576,CU677079,DQ890732,HQ447184_5end | |association_with_transcript=-27bp_to_AB464576,CU677079,DQ890732,HQ447184_5end | ||
|cluster_id=chr17:46675539..46675551,- | |||
|coexpression_cluster_id=C3645 | |||
|description=CAGE_peak_7_at_HOXB6_5end | |description=CAGE_peak_7_at_HOXB6_5end | ||
|id=chr17:46675539..46675551,- | |id=chr17:46675539..46675551,- | ||
|ontology_enrichment_celltype=CL:1000449!7.50e-18!16;CL:0002681!2.26e-15!13;CL:0002584!2.26e-15!13;CL:1000497!3.32e-15!18;CL:0002518!3.32e-15!18;CL:1000507!8.08e-14!12;CL:1000494!8.08e-14!12;CL:1000612!9.09e-09!7;CL:1000746!9.09e-09!7 | |ontology_enrichment_celltype=CL:1000449!7.50e-18!16;CL:0002681!2.26e-15!13;CL:0002584!2.26e-15!13;CL:1000497!3.32e-15!18;CL:0002518!3.32e-15!18;CL:1000507!8.08e-14!12;CL:1000494!8.08e-14!12;CL:1000612!9.09e-09!7;CL:1000746!9.09e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0002681;1.74e-24;12!CL:0002584;1.74e-24;12!CL:1000449;5.04e-23;15!CL:1000497;5.10e-20;17!CL:0002518;5.10e-20;17!CL:1000746;2.31e-15;7!CL:1000612;2.31e-15;7!CL:1000507;2.41e-14;10!CL:1000494;2.41e-14;10!CL:0000239;9.11e-11;3!CL:1000615;9.11e-11;3!CL:0002306;9.11e-11;3!CL:0002188;1.85e-10;5!CL:0002564;4.54e-10;3!CL:0002521;1.92e-09;3!CL:0002598;6.05e-08;2!CL:0000669;3.49e-07;4!CL:0002602;6.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002681,1.87e-24,12;CL:0002584,1.87e-24,12;CL:1000449,4.87e-23,15;CL:1000497,4.94e-20,17;CL:0002518,4.94e-20,17;CL:1000746,2.51e-15,7;CL:1000612,2.51e-15,7;CL:1000507,2.18e-14,10;CL:1000494,2.18e-14,10;CL:0000239,9.76e-11,3;CL:1000615,9.76e-11,3;CL:0002306,9.76e-11,3;CL:0002188,2.00e-10,5;CL:0002564,3.56e-10,3;CL:0002521,3.64e-09,3;CL:0002598,6.27e-08,2;CL:0000669,3.78e-07,4;CL:0002602,4.24e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.71e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!2.02e-21!32;UBERON:0000058!9.16e-21!26;UBERON:0000080!3.17e-20!18;UBERON:0002120!3.17e-20!18;UBERON:0004875!3.17e-20!18;UBERON:0005721!3.17e-20!18;UBERON:0005754!3.17e-20!18;UBERON:0007297!3.17e-20!18;UBERON:0002113!2.50e-19!27;UBERON:0003918!2.50e-19!27;UBERON:0005095!2.50e-19!27;UBERON:0007687!2.50e-19!27;UBERON:0006555!5.40e-19!17;UBERON:0005103!5.40e-19!17;UBERON:0000083!5.40e-19!17;UBERON:0009201!5.40e-19!17;UBERON:0004819!5.40e-19!17;UBERON:0006553!5.40e-19!17;UBERON:0003074!5.40e-19!17;UBERON:0003060!5.40e-19!17;UBERON:0003887!5.81e-18!21;UBERON:0004211!7.50e-18!16;UBERON:0001285!7.50e-18!16;UBERON:0007684!7.50e-18!16;UBERON:0003220!7.50e-18!16;UBERON:0004208!7.50e-18!16;UBERON:0004876!1.66e-17!20;UBERON:0000353!7.51e-16!17;UBERON:0001225!2.26e-15!13;UBERON:0008987!2.26e-15!13;UBERON:0009773!8.08e-14!12;UBERON:0001231!8.08e-14!12;UBERON:0004810!8.08e-14!12;UBERON:0006554!2.29e-13!44;UBERON:0002417!3.51e-13!61;UBERON:0000916!3.51e-13!61;UBERON:0005177!6.62e-13!107;UBERON:0001008!7.31e-13!45;UBERON:0002100!1.43e-12!216;UBERON:0009569!1.84e-12!113;UBERON:0001851!1.29e-11!16;UBERON:0005172!1.62e-11!55;UBERON:0005173!1.62e-11!55;UBERON:0003064!5.07e-11!37;UBERON:0003886!7.29e-10!63;UBERON:0000466!6.65e-09!126;UBERON:0000074!9.09e-09!7;UBERON:0001229!9.09e-09!7;UBERON:0001230!9.09e-09!7;UBERON:0005749!9.09e-09!7;UBERON:0004199!9.09e-09!7;UBERON:0004209!9.09e-09!7;UBERON:0004198!9.09e-09!7;UBERON:0000464!1.32e-08!104;UBERON:0003104!5.54e-08!238;UBERON:0009142!5.54e-08!238;UBERON:0002553!6.07e-08!70;UBERON:0005256!3.01e-07!143;UBERON:0003103!6.88e-07!69;UBERON:0003586!7.43e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001225;1.74e-24;12!UBERON:0008987;1.74e-24;12!UBERON:0000489;3.03e-23;29!UBERON:0006555;5.04e-23;15!UBERON:0000353;5.04e-23;15!UBERON:0004819;5.04e-23;15!UBERON:0001285;5.04e-23;15!UBERON:0007684;5.04e-23;15!UBERON:0002113;5.40e-22;24!UBERON:0011143;5.40e-22;24!UBERON:0001851;3.75e-19;15!UBERON:0006554;6.64e-17;30!UBERON:0001008;6.64e-17;30!UBERON:0000074;2.31e-15;7!UBERON:0001229;2.31e-15;7!UBERON:0011135;2.61e-15;5!UBERON:0002216;2.61e-15;5!UBERON:0011134;2.61e-15;5!UBERON:0002209;2.61e-15;5!UBERON:0002213;2.61e-15;5!UBERON:0007844;2.61e-15;5!UBERON:0011138;2.61e-15;5!UBERON:0001130;2.61e-15;5!UBERON:0001066;2.61e-15;5!UBERON:0001468;2.61e-15;5!UBERON:0004211;2.41e-14;10!UBERON:0009773;2.41e-14;10!UBERON:0001231;2.41e-14;10!UBERON:0004810;2.41e-14;10!UBERON:0004905;3.54e-13;8!UBERON:0000982;3.54e-13;8!UBERON:0004770;3.54e-13;8!UBERON:0006947;6.29e-11;3!UBERON:0004054;6.29e-11;3!UBERON:0006853;9.11e-11;3!UBERON:0007685;9.11e-11;3!UBERON:0004134;9.11e-11;3!UBERON:0002242;4.54e-10;3!UBERON:0002072;1.44e-09;5!UBERON:0002190;1.92e-09;3!UBERON:0005904;2.81e-08;4!UBERON:0000058;6.14e-08;10!UBERON:0005172;4.59e-07;52!UBERON:0005173;4.59e-07;52!UBERON:0006444;6.29e-07;2!UBERON:0001995;6.29e-07;2!UBERON:0004715;6.29e-07;2!UBERON:0004175;7.58e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,4.23e-28,31;UBERON:0002113,4.17e-27,26;UBERON:0003918,4.17e-27,26;UBERON:0011143,4.17e-27,26;UBERON:0005095,4.17e-27,26;UBERON:0007687,4.17e-27,26;UBERON:0006555,9.98e-26,16;UBERON:0004819,9.98e-26,16;UBERON:0001225,1.87e-24,12;UBERON:0008987,1.87e-24,12;UBERON:0004211,4.87e-23,15;UBERON:0009773,4.87e-23,15;UBERON:0001231,4.87e-23,15;UBERON:0001285,4.87e-23,15;UBERON:0007684,4.87e-23,15;UBERON:0004208,4.87e-23,15;UBERON:0000353,5.44e-23,15;UBERON:0000080,3.24e-21,9;UBERON:0002120,3.24e-21,9;UBERON:0004875,3.24e-21,9;UBERON:0005721,3.24e-21,9;UBERON:0005754,3.24e-21,9;UBERON:0007297,3.24e-21,9;UBERON:0000058,3.73e-21,19;UBERON:0001851,3.97e-19,15;UBERON:0005103,3.67e-18,8;UBERON:0000083,3.67e-18,8;UBERON:0009201,3.67e-18,8;UBERON:0006553,3.67e-18,8;UBERON:0003074,3.67e-18,8;UBERON:0003060,3.67e-18,8;UBERON:0004876,4.29e-17,11;UBERON:0011135,1.38e-15,5;UBERON:0002216,1.38e-15,5;UBERON:0011134,1.38e-15,5;UBERON:0002209,1.38e-15,5;UBERON:0002213,1.38e-15,5;UBERON:0005856,1.38e-15,5;UBERON:0005866,1.38e-15,5;UBERON:0005863,1.38e-15,5;UBERON:0007844,1.38e-15,5;UBERON:0011138,1.38e-15,5;UBERON:0001130,1.38e-15,5;UBERON:0001066,1.38e-15,5;UBERON:0001468,1.38e-15,5;UBERON:0003887,1.51e-15,12;UBERON:0010532,2.51e-15,7;UBERON:0000074,2.51e-15,7;UBERON:0001229,2.51e-15,7;UBERON:0001230,2.51e-15,7;UBERON:0003220,2.51e-15,7;UBERON:0005749,2.51e-15,7;UBERON:0004199,2.51e-15,7;UBERON:0004209,2.51e-15,7;UBERON:0004198,2.51e-15,7;UBERON:0004810,2.18e-14,10;UBERON:0002417,9.69e-14,60;UBERON:0000916,9.69e-14,60;UBERON:0004905,2.82e-13,8;UBERON:0000982,2.82e-13,8;UBERON:0004770,2.82e-13,8;UBERON:0006554,3.65e-13,47;UBERON:0001008,8.30e-13,48;UBERON:0005172,1.84e-12,54;UBERON:0005173,1.84e-12,54;UBERON:0005177,8.52e-12,101;UBERON:0009569,5.40e-11,112;UBERON:0006947,5.82e-11,3;UBERON:0004054,5.82e-11,3;UBERON:0006853,9.76e-11,3;UBERON:0007685,9.76e-11,3;UBERON:0004134,9.76e-11,3;UBERON:0003104,1.16e-10,160;UBERON:0009142,1.16e-10,160;UBERON:0003103,2.62e-10,68;UBERON:0002242,3.56e-10,3;UBERON:0003068,3.56e-10,3;UBERON:0002328,3.56e-10,3;UBERON:0004880,3.56e-10,3;UBERON:0002072,2.05e-09,5;UBERON:0002190,3.64e-09,3;UBERON:0005904,2.65e-08,4;UBERON:0002100,6.78e-08,199;UBERON:0006444,4.24e-07,2;UBERON:0001995,4.24e-07,2;UBERON:0004715,4.24e-07,2 | |||
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| ||
|short_description=p7@HOXB6 | |short_description=p7@HOXB6 | ||
}} | }} |
Latest revision as of 07:21, 25 September 2015
Short description: | p7@HOXB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HOXB6_5end |
Coexpression cluster: | C3645_ductus_seminal_alveolar_endometrial_Smooth_small_nonsmall |
Association with transcript: | -27bp_to_AB464576, CU677079, DQ890732, HQ447184_5end |
EntrezGene: | HOXB6 |
HGNC: | 5117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cortical cell | 1.87e-24 | 12 |
renal cortical epithelial cell | 1.87e-24 | 12 |
epithelial cell of nephron | 4.87e-23 | 15 |
kidney cell | 4.94e-20 | 17 |
kidney epithelial cell | 4.94e-20 | 17 |
glomerular cell | 2.51e-15 | 7 |
kidney corpuscule cell | 2.51e-15 | 7 |
kidney tubule cell | 2.18e-14 | 10 |
nephron tubule epithelial cell | 2.18e-14 | 10 |
brush border epithelial cell | 9.76e-11 | 3 |
kidney cortex tubule cell | 9.76e-11 | 3 |
epithelial cell of proximal tubule | 9.76e-11 | 3 |
glomerular endothelial cell | 2.00e-10 | 5 |
nucleus pulposus cell of intervertebral disc | 3.56e-10 | 3 |
subcutaneous fat cell | 3.64e-09 | 3 |
bronchial smooth muscle cell | 6.27e-08 | 2 |
pericyte cell | 3.78e-07 | 4 |
annulus pulposus cell | 4.24e-07 | 2 |